Mercurial > repos > rnateam > ribotaper

annotate test-data/test.gtf @ 1:56ffbec351b3 draft default tip

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 07674fe3507909d11d7431e3b8c48afcfb1f4b5e"
author rnateam
date Tue, 07 Jun 2022 09:22:45 +0000
parents bade631353d2
children
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0
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1 chr22 HAVANA gene 16062157 16063236 . + . gene_id "ENSG00000233866.1"; transcript_id "ENSG00000233866.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LA16c-4G1.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.3"; level 2; havana_gene "OTTHUMG00000140195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2 chr22 HAVANA transcript 16062157 16063236 . + . gene_id "ENSG00000233866.1"; transcript_id "ENST00000424770.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LA16c-4G1.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.3-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000140195.1"; havana_transcript "OTTHUMT00000276574.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3 chr22 HAVANA exon 16062157 16062316 . + . gene_id "ENSG00000233866.1"; transcript_id "ENST00000424770.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LA16c-4G1.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.3-001"; exon_number 1; exon_id "ENSE00001660730.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000140195.1"; havana_transcript "OTTHUMT00000276574.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4 chr22 HAVANA exon 16062811 16063236 . + . gene_id "ENSG00000233866.1"; transcript_id "ENST00000424770.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LA16c-4G1.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.3-001"; exon_number 2; exon_id "ENSE00001798223.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000140195.1"; havana_transcript "OTTHUMT00000276574.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5 chr22 HAVANA gene 16076052 16076172 . - . gene_id "ENSG00000229286.1"; transcript_id "ENSG00000229286.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-4G1.4"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.4"; level 2; havana_gene "OTTHUMG00000140193.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6 chr22 HAVANA transcript 16076052 16076172 . - . gene_id "ENSG00000229286.1"; transcript_id "ENST00000448070.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-4G1.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.4-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140193.1"; havana_transcript "OTTHUMT00000276571.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7 chr22 HAVANA exon 16076052 16076172 . - . gene_id "ENSG00000229286.1"; transcript_id "ENST00000448070.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-4G1.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.4-001"; exon_number 1; exon_id "ENSE00001645102.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140193.1"; havana_transcript "OTTHUMT00000276571.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8 chr22 HAVANA gene 16084249 16084826 . - . gene_id "ENSG00000235265.1"; transcript_id "ENSG00000235265.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-4G1.5"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.5"; level 2; havana_gene "OTTHUMG00000140197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9 chr22 HAVANA transcript 16084249 16084826 . - . gene_id "ENSG00000235265.1"; transcript_id "ENST00000413156.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-4G1.5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.5-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140197.1"; havana_transcript "OTTHUMT00000276576.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10 chr22 HAVANA exon 16084249 16084826 . - . gene_id "ENSG00000235265.1"; transcript_id "ENST00000413156.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-4G1.5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.5-001"; exon_number 1; exon_id "ENSE00001776112.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140197.1"; havana_transcript "OTTHUMT00000276576.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11 chr22 HAVANA gene 16100517 16124973 . - . gene_id "ENSG00000223875.1"; transcript_id "ENSG00000223875.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NBEAP3"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "NBEAP3"; level 2; havana_gene "OTTHUMG00000140196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12 chr22 HAVANA transcript 16100517 16124973 . - . gene_id "ENSG00000223875.1"; transcript_id "ENST00000420638.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NBEAP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NBEAP3-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140196.1"; havana_transcript "OTTHUMT00000276575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13 chr22 HAVANA exon 16124742 16124973 . - . gene_id "ENSG00000223875.1"; transcript_id "ENST00000420638.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NBEAP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NBEAP3-001"; exon_number 1; exon_id "ENSE00001747868.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140196.1"; havana_transcript "OTTHUMT00000276575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14 chr22 HAVANA exon 16118792 16118913 . - . gene_id "ENSG00000223875.1"; transcript_id "ENST00000420638.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NBEAP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NBEAP3-001"; exon_number 2; exon_id "ENSE00001594742.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140196.1"; havana_transcript "OTTHUMT00000276575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15 chr22 HAVANA exon 16101276 16101474 . - . gene_id "ENSG00000223875.1"; transcript_id "ENST00000420638.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NBEAP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NBEAP3-001"; exon_number 3; exon_id "ENSE00001697043.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140196.1"; havana_transcript "OTTHUMT00000276575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16 chr22 HAVANA exon 16100517 16100648 . - . gene_id "ENSG00000223875.1"; transcript_id "ENST00000420638.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NBEAP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NBEAP3-001"; exon_number 4; exon_id "ENSE00001608519.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140196.1"; havana_transcript "OTTHUMT00000276575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
17 chr22 HAVANA gene 16122720 16123768 . + . gene_id "ENSG00000215270.3"; transcript_id "ENSG00000215270.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60H5.7"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60H5.7"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000140200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
18 chr22 HAVANA transcript 16122720 16123768 . + . gene_id "ENSG00000215270.3"; transcript_id "ENST00000398242.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60H5.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60H5.7-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140200.1"; havana_transcript "OTTHUMT00000276581.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
19 chr22 HAVANA exon 16122720 16123768 . + . gene_id "ENSG00000215270.3"; transcript_id "ENST00000398242.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60H5.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60H5.7-001"; exon_number 1; exon_id "ENSE00001603029.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140200.1"; havana_transcript "OTTHUMT00000276581.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
20 chr22 HAVANA gene 16147979 16193004 . - . gene_id "ENSG00000206195.6"; transcript_id "ENSG00000206195.6"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "NOVEL"; transcript_name "AP000525.9"; level 2; havana_gene "OTTHUMG00000185288.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
21 chr22 HAVANA transcript 16147979 16192971 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000447898.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276780.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
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22 chr22 HAVANA exon 16192906 16192971 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000447898.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-002"; exon_number 1; exon_id "ENSE00001632167.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276780.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
23 chr22 HAVANA exon 16186811 16186946 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000447898.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-002"; exon_number 2; exon_id "ENSE00002235266.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276780.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
24 chr22 HAVANA exon 16162397 16162487 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000447898.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-002"; exon_number 3; exon_id "ENSE00002219189.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276780.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
25 chr22 HAVANA exon 16147979 16151821 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000447898.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-002"; exon_number 4; exon_id "ENSE00001767994.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276780.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
26 chr22 HAVANA transcript 16150255 16193000 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000437781.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-003"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
27 chr22 HAVANA exon 16192906 16193000 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000437781.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-003"; exon_number 1; exon_id "ENSE00001715620.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
28 chr22 HAVANA exon 16190681 16190791 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000437781.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-003"; exon_number 2; exon_id "ENSE00002235402.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
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29 chr22 HAVANA exon 16189264 16189411 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000437781.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-003"; exon_number 3; exon_id "ENSE00002265621.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
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30 chr22 HAVANA exon 16189032 16189143 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000437781.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-003"; exon_number 4; exon_id "ENSE00002219275.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
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31 chr22 HAVANA exon 16187165 16187302 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000437781.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-003"; exon_number 5; exon_id "ENSE00001650067.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
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32 chr22 HAVANA exon 16186811 16186946 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000437781.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-003"; exon_number 6; exon_id "ENSE00002235266.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
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33 chr22 HAVANA exon 16162397 16162487 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000437781.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-003"; exon_number 7; exon_id "ENSE00002219189.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
34 chr22 HAVANA exon 16150255 16151821 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000437781.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-003"; exon_number 8; exon_id "ENSE00001714852.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
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35 chr22 HAVANA transcript 16150529 16193004 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000413768.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
36 chr22 HAVANA exon 16192906 16193004 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000413768.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-001"; exon_number 1; exon_id "ENSE00001729823.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
37 chr22 HAVANA exon 16190681 16190791 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000413768.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-001"; exon_number 2; exon_id "ENSE00002235402.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
38 chr22 HAVANA exon 16189264 16189378 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000413768.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-001"; exon_number 3; exon_id "ENSE00001764172.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
39 chr22 HAVANA exon 16189032 16189143 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000413768.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-001"; exon_number 4; exon_id "ENSE00002219275.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
40 chr22 HAVANA exon 16187165 16187302 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000413768.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-001"; exon_number 5; exon_id "ENSE00001650067.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
41 chr22 HAVANA exon 16186811 16186953 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000413768.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-001"; exon_number 6; exon_id "ENSE00001620210.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
42 chr22 HAVANA exon 16162397 16162487 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000413768.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-001"; exon_number 7; exon_id "ENSE00002219189.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
43 chr22 HAVANA exon 16150529 16151821 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000413768.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-001"; exon_number 8; exon_id "ENSE00001636604.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
44 chr22 HAVANA transcript 16158798 16192995 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000383038.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-004"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
45 chr22 HAVANA exon 16192906 16192995 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000383038.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-004"; exon_number 1; exon_id "ENSE00002258817.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
46 chr22 HAVANA exon 16190681 16190791 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000383038.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-004"; exon_number 2; exon_id "ENSE00002235402.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
47 chr22 HAVANA exon 16189264 16189411 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000383038.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-004"; exon_number 3; exon_id "ENSE00002265621.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
48 chr22 HAVANA exon 16189032 16189143 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000383038.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-004"; exon_number 4; exon_id "ENSE00002219275.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
49 chr22 HAVANA exon 16187165 16187278 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000383038.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-004"; exon_number 5; exon_id "ENSE00002292143.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
50 chr22 HAVANA exon 16186811 16186946 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000383038.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-004"; exon_number 6; exon_id "ENSE00002235266.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
51 chr22 HAVANA exon 16162397 16162487 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000383038.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-004"; exon_number 7; exon_id "ENSE00002219189.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
52 chr22 HAVANA exon 16158798 16159389 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000383038.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-004"; exon_number 8; exon_id "ENSE00002218519.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
53 chr22 HAVANA transcript 16158829 16159470 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000607933.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-006"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000472240.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
54 chr22 HAVANA exon 16158829 16159470 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000607933.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-006"; exon_number 1; exon_id "ENSE00003710211.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000472240.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
55 chr22 HAVANA transcript 16186149 16187254 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000458623.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-005"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276782.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
56 chr22 HAVANA exon 16187165 16187254 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000458623.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-005"; exon_number 1; exon_id "ENSE00001725302.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276782.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
57 chr22 HAVANA exon 16186811 16186946 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000458623.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-005"; exon_number 2; exon_id "ENSE00002235266.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276782.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
58 chr22 HAVANA exon 16186149 16186335 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000458623.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-005"; exon_number 3; exon_id "ENSE00001633543.1"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276782.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
59 chr22 HAVANA gene 16150776 16151397 . - . gene_id "ENSG00000271672.1"; transcript_id "ENSG00000271672.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "DUXAP8"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "DUXAP8"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000140194.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
60 chr22 HAVANA transcript 16150776 16151397 . - . gene_id "ENSG00000271672.1"; transcript_id "ENST00000456786.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "DUXAP8"; transcript_type "transcribed_processed_pseudogene"; transcript_status "KNOWN"; transcript_name "DUXAP8-001"; level 1; ont "PGO:0000004"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140194.3"; havana_transcript "OTTHUMT00000276572.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
61 chr22 HAVANA exon 16150776 16151397 . - . gene_id "ENSG00000271672.1"; transcript_id "ENST00000456786.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "DUXAP8"; transcript_type "transcribed_processed_pseudogene"; transcript_status "KNOWN"; transcript_name "DUXAP8-001"; exon_number 1; exon_id "ENSE00001675587.2"; level 1; ont "PGO:0000004"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140194.3"; havana_transcript "OTTHUMT00000276572.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
62 chr22 HAVANA gene 16154073 16154766 . - . gene_id "ENSG00000272872.1"; transcript_id "ENSG00000272872.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "LL22NC03-N14H11.1"; transcript_type "sense_intronic"; transcript_status "NOVEL"; transcript_name "LL22NC03-N14H11.1"; level 2; havana_gene "OTTHUMG00000186093.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
63 chr22 HAVANA transcript 16154073 16154766 . - . gene_id "ENSG00000272872.1"; transcript_id "ENST00000608286.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "LL22NC03-N14H11.1"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "LL22NC03-N14H11.1-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186093.1"; havana_transcript "OTTHUMT00000472241.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
64 chr22 HAVANA exon 16154073 16154766 . - . gene_id "ENSG00000272872.1"; transcript_id "ENST00000608286.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "LL22NC03-N14H11.1"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "LL22NC03-N14H11.1-001"; exon_number 1; exon_id "ENSE00003709718.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186093.1"; havana_transcript "OTTHUMT00000472241.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
65 chr22 HAVANA gene 16157079 16172700 . + . gene_id "ENSG00000232775.2"; transcript_id "ENSG00000232775.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000525.10"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000525.10"; level 2; havana_gene "OTTHUMG00000140198.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
66 chr22 HAVANA transcript 16157079 16172151 . + . gene_id "ENSG00000232775.2"; transcript_id "ENST00000609679.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000525.10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.10-003"; level 2; havana_gene "OTTHUMG00000140198.3"; havana_transcript "OTTHUMT00000472242.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
67 chr22 HAVANA exon 16157079 16157342 . + . gene_id "ENSG00000232775.2"; transcript_id "ENST00000609679.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000525.10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.10-003"; exon_number 1; exon_id "ENSE00003709080.1"; level 2; havana_gene "OTTHUMG00000140198.3"; havana_transcript "OTTHUMT00000472242.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
68 chr22 HAVANA exon 16164482 16164569 . + . gene_id "ENSG00000232775.2"; transcript_id "ENST00000609679.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000525.10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.10-003"; exon_number 2; exon_id "ENSE00001762192.1"; level 2; havana_gene "OTTHUMG00000140198.3"; havana_transcript "OTTHUMT00000472242.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
69 chr22 HAVANA exon 16171952 16172151 . + . gene_id "ENSG00000232775.2"; transcript_id "ENST00000609679.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000525.10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.10-003"; exon_number 3; exon_id "ENSE00003707205.1"; level 2; havana_gene "OTTHUMG00000140198.3"; havana_transcript "OTTHUMT00000472242.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
70 chr22 HAVANA transcript 16162066 16172700 . + . gene_id "ENSG00000232775.2"; transcript_id "ENST00000440946.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000525.10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.10-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000140198.3"; havana_transcript "OTTHUMT00000276785.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
71 chr22 HAVANA exon 16162066 16162388 . + . gene_id "ENSG00000232775.2"; transcript_id "ENST00000440946.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000525.10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.10-002"; exon_number 1; exon_id "ENSE00001621288.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000140198.3"; havana_transcript "OTTHUMT00000276785.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
72 chr22 HAVANA exon 16164482 16164569 . + . gene_id "ENSG00000232775.2"; transcript_id "ENST00000440946.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000525.10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.10-002"; exon_number 2; exon_id "ENSE00001762192.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000140198.3"; havana_transcript "OTTHUMT00000276785.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
73 chr22 HAVANA exon 16171952 16172700 . + . gene_id "ENSG00000232775.2"; transcript_id "ENST00000440946.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000525.10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.10-002"; exon_number 3; exon_id "ENSE00001730294.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000140198.3"; havana_transcript "OTTHUMT00000276785.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
74 chr22 HAVANA transcript 16171460 16172116 . + . gene_id "ENSG00000232775.2"; transcript_id "ENST00000414726.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000525.10"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000525.10-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000140198.3"; havana_transcript "OTTHUMT00000276784.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
75 chr22 HAVANA exon 16171460 16171607 . + . gene_id "ENSG00000232775.2"; transcript_id "ENST00000414726.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000525.10"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000525.10-001"; exon_number 1; exon_id "ENSE00001798044.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000140198.3"; havana_transcript "OTTHUMT00000276784.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
76 chr22 HAVANA exon 16171952 16172116 . + . gene_id "ENSG00000232775.2"; transcript_id "ENST00000414726.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000525.10"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000525.10-001"; exon_number 2; exon_id "ENSE00001650023.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000140198.3"; havana_transcript "OTTHUMT00000276784.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
77 chr22 HAVANA gene 16179617 16181004 . - . gene_id "ENSG00000271127.1"; transcript_id "ENSG00000271127.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "LL22NC03-N64E9.1"; transcript_type "sense_intronic"; transcript_status "NOVEL"; transcript_name "LL22NC03-N64E9.1"; level 2; havana_gene "OTTHUMG00000185289.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
78 chr22 HAVANA transcript 16179617 16181004 . - . gene_id "ENSG00000271127.1"; transcript_id "ENST00000603308.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "LL22NC03-N64E9.1"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "LL22NC03-N64E9.1-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000185289.1"; havana_transcript "OTTHUMT00000470076.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
79 chr22 HAVANA exon 16179617 16181004 . - . gene_id "ENSG00000271127.1"; transcript_id "ENST00000603308.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "LL22NC03-N64E9.1"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "LL22NC03-N64E9.1-001"; exon_number 1; exon_id "ENSE00003656245.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000185289.1"; havana_transcript "OTTHUMT00000470076.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
80 chr22 HAVANA gene 16199666 16231333 . - . gene_id "ENSG00000225255.2"; transcript_id "ENSG00000225255.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LA16c-83F12.6"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "LA16c-83F12.6"; level 1; havana_gene "OTTHUMG00000140260.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
81 chr22 HAVANA transcript 16199666 16212276 . - . gene_id "ENSG00000225255.2"; transcript_id "ENST00000438574.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LA16c-83F12.6"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-83F12.6-001"; level 2; havana_gene "OTTHUMG00000140260.2"; havana_transcript "OTTHUMT00000276778.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
82 chr22 HAVANA exon 16212183 16212276 . - . gene_id "ENSG00000225255.2"; transcript_id "ENST00000438574.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LA16c-83F12.6"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-83F12.6-001"; exon_number 1; exon_id "ENSE00001617515.1"; level 2; havana_gene "OTTHUMG00000140260.2"; havana_transcript "OTTHUMT00000276778.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
83 chr22 HAVANA exon 16203115 16203251 . - . gene_id "ENSG00000225255.2"; transcript_id "ENST00000438574.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LA16c-83F12.6"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-83F12.6-001"; exon_number 2; exon_id "ENSE00001784645.1"; level 2; havana_gene "OTTHUMG00000140260.2"; havana_transcript "OTTHUMT00000276778.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
84 chr22 HAVANA exon 16199666 16199953 . - . gene_id "ENSG00000225255.2"; transcript_id "ENST00000438574.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LA16c-83F12.6"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-83F12.6-001"; exon_number 3; exon_id "ENSE00001715873.1"; level 2; havana_gene "OTTHUMG00000140260.2"; havana_transcript "OTTHUMT00000276778.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
85 chr22 HAVANA transcript 16199666 16231333 . - . gene_id "ENSG00000225255.2"; transcript_id "ENST00000453395.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LA16c-83F12.6"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-83F12.6-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000140260.2"; havana_transcript "OTTHUMT00000276779.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
86 chr22 HAVANA exon 16231064 16231333 . - . gene_id "ENSG00000225255.2"; transcript_id "ENST00000453395.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LA16c-83F12.6"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-83F12.6-002"; exon_number 1; exon_id "ENSE00001671974.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000140260.2"; havana_transcript "OTTHUMT00000276779.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
87 chr22 HAVANA exon 16223510 16223575 . - . gene_id "ENSG00000225255.2"; transcript_id "ENST00000453395.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LA16c-83F12.6"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-83F12.6-002"; exon_number 2; exon_id "ENSE00001733158.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000140260.2"; havana_transcript "OTTHUMT00000276779.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
88 chr22 HAVANA exon 16199666 16199953 . - . gene_id "ENSG00000225255.2"; transcript_id "ENST00000453395.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LA16c-83F12.6"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-83F12.6-002"; exon_number 3; exon_id "ENSE00001715873.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000140260.2"; havana_transcript "OTTHUMT00000276779.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
89 chr22 HAVANA gene 16227138 16228807 . + . gene_id "ENSG00000235992.1"; transcript_id "ENSG00000235992.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GRAMD4P2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "GRAMD4P2"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000155641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
90 chr22 HAVANA transcript 16227138 16228807 . + . gene_id "ENSG00000235992.1"; transcript_id "ENST00000423297.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GRAMD4P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "GRAMD4P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155641.1"; havana_transcript "OTTHUMT00000340947.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
91 chr22 HAVANA exon 16227138 16227591 . + . gene_id "ENSG00000235992.1"; transcript_id "ENST00000423297.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GRAMD4P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "GRAMD4P2-001"; exon_number 1; exon_id "ENSE00001736141.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155641.1"; havana_transcript "OTTHUMT00000340947.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
92 chr22 HAVANA exon 16228165 16228807 . + . gene_id "ENSG00000235992.1"; transcript_id "ENST00000423297.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GRAMD4P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "GRAMD4P2-001"; exon_number 2; exon_id "ENSE00001787093.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155641.1"; havana_transcript "OTTHUMT00000340947.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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93 chr22 HAVANA gene 16255355 16256477 . - . gene_id "ENSG00000241838.2"; transcript_id "ENSG00000241838.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-3G11.7"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-3G11.7"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000140315.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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94 chr22 HAVANA transcript 16255355 16256477 . - . gene_id "ENSG00000241838.2"; transcript_id "ENST00000417657.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-3G11.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-3G11.7-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140315.1"; havana_transcript "OTTHUMT00000276919.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
95 chr22 HAVANA exon 16255355 16256477 . - . gene_id "ENSG00000241838.2"; transcript_id "ENST00000417657.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-3G11.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-3G11.7-001"; exon_number 1; exon_id "ENSE00001664866.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140315.1"; havana_transcript "OTTHUMT00000276919.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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96 chr22 ENSEMBL transcript 16255919 16256227 . - . gene_id "ENSG00000241838.2"; transcript_id "ENST00000339523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-3G11.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-3G11.7-201"; level 3; havana_gene "OTTHUMG00000140315.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
97 chr22 ENSEMBL exon 16255919 16256227 . - . gene_id "ENSG00000241838.2"; transcript_id "ENST00000339523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-3G11.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-3G11.7-201"; exon_number 1; exon_id "ENSE00002211954.1"; level 3; havana_gene "OTTHUMG00000140315.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
98 chr22 HAVANA gene 16256441 16287937 . - . gene_id "ENSG00000198062.10"; transcript_id "ENSG00000198062.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH"; level 1; tag "ncRNA_host"; havana_gene "OTTHUMG00000140314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
99 chr22 HAVANA transcript 16256441 16287717 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
100 chr22 HAVANA exon 16287254 16287717 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 1; exon_id "ENSE00001781695.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
101 chr22 HAVANA CDS 16287254 16287717 . - 0 gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 1; exon_id "ENSE00001781695.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
102 chr22 HAVANA exon 16282478 16282592 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 2; exon_id "ENSE00001746577.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
103 chr22 HAVANA CDS 16282478 16282592 . - 1 gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 2; exon_id "ENSE00001746577.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
104 chr22 HAVANA exon 16282145 16282318 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 3; exon_id "ENSE00001788239.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
105 chr22 HAVANA CDS 16282145 16282318 . - 0 gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 3; exon_id "ENSE00001788239.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
106 chr22 HAVANA exon 16280334 16280589 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 4; exon_id "ENSE00001593346.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
107 chr22 HAVANA CDS 16280434 16280589 . - 0 gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 4; exon_id "ENSE00001593346.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
108 chr22 HAVANA stop_codon 16280431 16280433 . - 0 gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 4; exon_id "ENSE00001593346.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
109 chr22 HAVANA exon 16279195 16279301 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 5; exon_id "ENSE00003460670.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
110 chr22 HAVANA exon 16277748 16277885 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 6; exon_id "ENSE00003669720.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
111 chr22 HAVANA exon 16275207 16275277 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 7; exon_id "ENSE00003508115.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
112 chr22 HAVANA exon 16269873 16269943 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 8; exon_id "ENSE00003515936.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
113 chr22 HAVANA exon 16268137 16268181 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 9; exon_id "ENSE00003572616.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
114 chr22 HAVANA exon 16266929 16267095 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 10; exon_id "ENSE00003639659.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
115 chr22 HAVANA exon 16258185 16258303 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 11; exon_id "ENSE00003480843.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
116 chr22 HAVANA exon 16256441 16256677 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; exon_number 12; exon_id "ENSE00001732273.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
117 chr22 HAVANA UTR 16280334 16280433 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
118 chr22 HAVANA UTR 16279195 16279301 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
119 chr22 HAVANA UTR 16277748 16277885 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
120 chr22 HAVANA UTR 16275207 16275277 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
121 chr22 HAVANA UTR 16269873 16269943 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
122 chr22 HAVANA UTR 16268137 16268181 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
123 chr22 HAVANA UTR 16266929 16267095 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
124 chr22 HAVANA UTR 16258185 16258303 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
125 chr22 HAVANA UTR 16256441 16256677 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000452800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POTEH-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000340296.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
126 chr22 HAVANA transcript 16256441 16287937 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
127 chr22 HAVANA exon 16287254 16287937 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 1; exon_id "ENSE00001413705.2"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
128 chr22 HAVANA CDS 16287254 16287885 . - 0 gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 1; exon_id "ENSE00001413705.2"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
129 chr22 HAVANA start_codon 16287883 16287885 . - 0 gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 1; exon_id "ENSE00001413705.2"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
130 chr22 HAVANA exon 16282478 16282592 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 2; exon_id "ENSE00001746577.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
131 chr22 HAVANA CDS 16282478 16282592 . - 1 gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 2; exon_id "ENSE00001746577.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
132 chr22 HAVANA exon 16282145 16282318 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 3; exon_id "ENSE00001788239.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
133 chr22 HAVANA CDS 16282145 16282318 . - 0 gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 3; exon_id "ENSE00001788239.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
134 chr22 HAVANA exon 16279195 16279301 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 4; exon_id "ENSE00003639359.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
135 chr22 HAVANA CDS 16279195 16279301 . - 0 gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 4; exon_id "ENSE00003639359.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
136 chr22 HAVANA exon 16277748 16277885 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 5; exon_id "ENSE00003623625.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
137 chr22 HAVANA CDS 16277748 16277885 . - 1 gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 5; exon_id "ENSE00003623625.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
138 chr22 HAVANA exon 16275207 16275277 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 6; exon_id "ENSE00003533849.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
139 chr22 HAVANA CDS 16275207 16275277 . - 1 gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 6; exon_id "ENSE00003533849.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
140 chr22 HAVANA exon 16269873 16269943 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 7; exon_id "ENSE00003535920.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
141 chr22 HAVANA CDS 16269873 16269943 . - 2 gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 7; exon_id "ENSE00003535920.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
142 chr22 HAVANA exon 16268137 16268181 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 8; exon_id "ENSE00003539333.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
143 chr22 HAVANA CDS 16268137 16268181 . - 0 gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 8; exon_id "ENSE00003539333.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
144 chr22 HAVANA exon 16266929 16267095 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 9; exon_id "ENSE00003523951.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
145 chr22 HAVANA CDS 16266929 16267095 . - 0 gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 9; exon_id "ENSE00003523951.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
146 chr22 HAVANA exon 16258185 16258303 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 10; exon_id "ENSE00003563151.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
147 chr22 HAVANA CDS 16258189 16258303 . - 1 gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 10; exon_id "ENSE00003563151.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
148 chr22 HAVANA stop_codon 16258186 16258188 . - 0 gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 10; exon_id "ENSE00003563151.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
149 chr22 HAVANA exon 16256441 16256677 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; exon_number 11; exon_id "ENSE00001732273.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
150 chr22 HAVANA UTR 16287886 16287937 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
151 chr22 HAVANA UTR 16258185 16258188 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
152 chr22 HAVANA UTR 16256441 16256677 . - . gene_id "ENSG00000198062.10"; transcript_id "ENST00000343518.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTEH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTEH-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46658.1"; havana_gene "OTTHUMG00000140314.5"; havana_transcript "OTTHUMT00000276918.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
153 chr22 HAVANA gene 16274560 16278602 . + . gene_id "ENSG00000236666.1"; transcript_id "ENSG00000236666.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "POTEH-AS1"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "POTEH-AS1"; level 2; havana_gene "OTTHUMG00000140316.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
154 chr22 HAVANA transcript 16274560 16278602 . + . gene_id "ENSG00000236666.1"; transcript_id "ENST00000422014.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "POTEH-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "POTEH-AS1-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000140316.1"; havana_transcript "OTTHUMT00000276920.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
155 chr22 HAVANA exon 16274560 16275003 . + . gene_id "ENSG00000236666.1"; transcript_id "ENST00000422014.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "POTEH-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "POTEH-AS1-001"; exon_number 1; exon_id "ENSE00001671032.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000140316.1"; havana_transcript "OTTHUMT00000276920.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
156 chr22 HAVANA exon 16276481 16278602 . + . gene_id "ENSG00000236666.1"; transcript_id "ENST00000422014.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "POTEH-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "POTEH-AS1-001"; exon_number 2; exon_id "ENSE00001600878.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000140316.1"; havana_transcript "OTTHUMT00000276920.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
157 chr22 ENSEMBL gene 16276398 16276504 . - . gene_id "ENSG00000212216.1"; transcript_id "ENSG00000212216.1"; gene_type "snRNA"; gene_status "KNOWN"; gene_name "RNU6-816P"; transcript_type "snRNA"; transcript_status "KNOWN"; transcript_name "RNU6-816P"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
158 chr22 ENSEMBL transcript 16276398 16276504 . - . gene_id "ENSG00000212216.1"; transcript_id "ENST00000390914.1"; gene_type "snRNA"; gene_status "KNOWN"; gene_name "RNU6-816P"; transcript_type "snRNA"; transcript_status "KNOWN"; transcript_name "RNU6-816P-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
159 chr22 ENSEMBL exon 16276398 16276504 . - . gene_id "ENSG00000212216.1"; transcript_id "ENST00000390914.1"; gene_type "snRNA"; gene_status "KNOWN"; gene_name "RNU6-816P"; transcript_type "snRNA"; transcript_status "KNOWN"; transcript_name "RNU6-816P-201"; exon_number 1; exon_id "ENSE00001807110.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
160 chr22 HAVANA gene 16333633 16342783 . + . gene_id "ENSG00000234381.1"; transcript_id "ENSG00000234381.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MED15P7"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "MED15P7"; level 2; havana_gene "OTTHUMG00000140336.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
161 chr22 HAVANA transcript 16333633 16342783 . + . gene_id "ENSG00000234381.1"; transcript_id "ENST00000435410.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MED15P7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "MED15P7-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140336.1"; havana_transcript "OTTHUMT00000276960.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
162 chr22 HAVANA exon 16333633 16333759 . + . gene_id "ENSG00000234381.1"; transcript_id "ENST00000435410.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MED15P7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "MED15P7-001"; exon_number 1; exon_id "ENSE00001618593.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140336.1"; havana_transcript "OTTHUMT00000276960.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
163 chr22 HAVANA exon 16338920 16339111 . + . gene_id "ENSG00000234381.1"; transcript_id "ENST00000435410.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MED15P7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "MED15P7-001"; exon_number 2; exon_id "ENSE00001758080.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140336.1"; havana_transcript "OTTHUMT00000276960.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
164 chr22 HAVANA exon 16340504 16340582 . + . gene_id "ENSG00000234381.1"; transcript_id "ENST00000435410.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MED15P7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "MED15P7-001"; exon_number 3; exon_id "ENSE00001654243.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140336.1"; havana_transcript "OTTHUMT00000276960.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
165 chr22 HAVANA exon 16341098 16341163 . + . gene_id "ENSG00000234381.1"; transcript_id "ENST00000435410.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MED15P7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "MED15P7-001"; exon_number 4; exon_id "ENSE00001799916.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140336.1"; havana_transcript "OTTHUMT00000276960.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
166 chr22 HAVANA exon 16341249 16341417 . + . gene_id "ENSG00000234381.1"; transcript_id "ENST00000435410.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MED15P7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "MED15P7-001"; exon_number 5; exon_id "ENSE00001655378.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140336.1"; havana_transcript "OTTHUMT00000276960.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
167 chr22 HAVANA exon 16341896 16341952 . + . gene_id "ENSG00000234381.1"; transcript_id "ENST00000435410.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MED15P7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "MED15P7-001"; exon_number 6; exon_id "ENSE00001729854.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140336.1"; havana_transcript "OTTHUMT00000276960.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
168 chr22 HAVANA exon 16342652 16342783 . + . gene_id "ENSG00000234381.1"; transcript_id "ENST00000435410.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MED15P7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "MED15P7-001"; exon_number 7; exon_id "ENSE00001680538.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140336.1"; havana_transcript "OTTHUMT00000276960.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
169 chr22 HAVANA gene 16345912 16355362 . + . gene_id "ENSG00000224435.2"; transcript_id "ENSG00000224435.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NF1P6"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "NF1P6"; level 2; havana_gene "OTTHUMG00000140337.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
170 chr22 HAVANA transcript 16345912 16355362 . + . gene_id "ENSG00000224435.2"; transcript_id "ENST00000426025.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NF1P6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NF1P6-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140337.1"; havana_transcript "OTTHUMT00000276961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
171 chr22 HAVANA exon 16345912 16346044 . + . gene_id "ENSG00000224435.2"; transcript_id "ENST00000426025.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NF1P6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NF1P6-001"; exon_number 1; exon_id "ENSE00001722571.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140337.1"; havana_transcript "OTTHUMT00000276961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
172 chr22 HAVANA exon 16346425 16346533 . + . gene_id "ENSG00000224435.2"; transcript_id "ENST00000426025.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NF1P6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NF1P6-001"; exon_number 2; exon_id "ENSE00001709429.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140337.1"; havana_transcript "OTTHUMT00000276961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
173 chr22 HAVANA exon 16348072 16348225 . + . gene_id "ENSG00000224435.2"; transcript_id "ENST00000426025.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NF1P6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NF1P6-001"; exon_number 3; exon_id "ENSE00001640219.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140337.1"; havana_transcript "OTTHUMT00000276961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
174 chr22 HAVANA exon 16349377 16349581 . + . gene_id "ENSG00000224435.2"; transcript_id "ENST00000426025.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NF1P6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NF1P6-001"; exon_number 4; exon_id "ENSE00001729523.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140337.1"; havana_transcript "OTTHUMT00000276961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
175 chr22 HAVANA exon 16350247 16350313 . + . gene_id "ENSG00000224435.2"; transcript_id "ENST00000426025.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NF1P6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NF1P6-001"; exon_number 5; exon_id "ENSE00001736008.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140337.1"; havana_transcript "OTTHUMT00000276961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
176 chr22 HAVANA exon 16350553 16350631 . + . gene_id "ENSG00000224435.2"; transcript_id "ENST00000426025.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NF1P6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NF1P6-001"; exon_number 6; exon_id "ENSE00001800164.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140337.1"; havana_transcript "OTTHUMT00000276961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
177 chr22 HAVANA exon 16352062 16352491 . + . gene_id "ENSG00000224435.2"; transcript_id "ENST00000426025.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NF1P6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NF1P6-001"; exon_number 7; exon_id "ENSE00001635596.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140337.1"; havana_transcript "OTTHUMT00000276961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
178 chr22 HAVANA exon 16352869 16353007 . + . gene_id "ENSG00000224435.2"; transcript_id "ENST00000426025.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NF1P6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NF1P6-001"; exon_number 8; exon_id "ENSE00001776543.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140337.1"; havana_transcript "OTTHUMT00000276961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
179 chr22 HAVANA exon 16353289 16353424 . + . gene_id "ENSG00000224435.2"; transcript_id "ENST00000426025.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NF1P6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NF1P6-001"; exon_number 9; exon_id "ENSE00001804715.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140337.1"; havana_transcript "OTTHUMT00000276961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
180 chr22 HAVANA exon 16353892 16353976 . + . gene_id "ENSG00000224435.2"; transcript_id "ENST00000426025.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NF1P6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NF1P6-001"; exon_number 10; exon_id "ENSE00001753289.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140337.1"; havana_transcript "OTTHUMT00000276961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
181 chr22 HAVANA exon 16355251 16355362 . + . gene_id "ENSG00000224435.2"; transcript_id "ENST00000426025.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NF1P6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NF1P6-001"; exon_number 11; exon_id "ENSE00001628719.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140337.1"; havana_transcript "OTTHUMT00000276961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
182 chr22 HAVANA gene 16362385 16362561 . + . gene_id "ENSG00000226474.1"; transcript_id "ENSG00000226474.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-2F2.5"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-2F2.5"; level 2; havana_gene "OTTHUMG00000140338.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
183 chr22 HAVANA transcript 16362385 16362561 . + . gene_id "ENSG00000226474.1"; transcript_id "ENST00000440999.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-2F2.5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-2F2.5-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140338.2"; havana_transcript "OTTHUMT00000276962.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
184 chr22 HAVANA exon 16362385 16362561 . + . gene_id "ENSG00000226474.1"; transcript_id "ENST00000440999.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-2F2.5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-2F2.5-001"; exon_number 1; exon_id "ENSE00001689749.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140338.2"; havana_transcript "OTTHUMT00000276962.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
185 chr22 HAVANA gene 16364867 16366204 . + . gene_id "ENSG00000231565.1"; transcript_id "ENSG00000231565.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NEK2P2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "NEK2P2"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000140351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
186 chr22 HAVANA transcript 16364867 16366204 . + . gene_id "ENSG00000231565.1"; transcript_id "ENST00000438441.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NEK2P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "NEK2P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140351.1"; havana_transcript "OTTHUMT00000276998.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
187 chr22 HAVANA exon 16364867 16366204 . + . gene_id "ENSG00000231565.1"; transcript_id "ENST00000438441.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NEK2P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "NEK2P2-001"; exon_number 1; exon_id "ENSE00001642903.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140351.1"; havana_transcript "OTTHUMT00000276998.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
188 chr22 HAVANA gene 16373081 16377055 . + . gene_id "ENSG00000230471.1"; transcript_id "ENSG00000230471.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LA16c-2F2.8"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "LA16c-2F2.8"; level 1; havana_gene "OTTHUMG00000140353.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
189 chr22 HAVANA transcript 16373081 16377055 . + . gene_id "ENSG00000230471.1"; transcript_id "ENST00000428118.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LA16c-2F2.8"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-2F2.8-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000140353.1"; havana_transcript "OTTHUMT00000277001.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
190 chr22 HAVANA exon 16373081 16373121 . + . gene_id "ENSG00000230471.1"; transcript_id "ENST00000428118.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LA16c-2F2.8"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-2F2.8-001"; exon_number 1; exon_id "ENSE00001619071.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000140353.1"; havana_transcript "OTTHUMT00000277001.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
191 chr22 HAVANA exon 16373830 16373911 . + . gene_id "ENSG00000230471.1"; transcript_id "ENST00000428118.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LA16c-2F2.8"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-2F2.8-001"; exon_number 2; exon_id "ENSE00001719006.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000140353.1"; havana_transcript "OTTHUMT00000277001.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
192 chr22 HAVANA exon 16375449 16377055 . + . gene_id "ENSG00000230471.1"; transcript_id "ENST00000428118.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LA16c-2F2.8"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-2F2.8-001"; exon_number 3; exon_id "ENSE00001598108.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000140353.1"; havana_transcript "OTTHUMT00000277001.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
193 chr22 HAVANA gene 16389485 16389602 . - . gene_id "ENSG00000230643.1"; transcript_id "ENSG00000230643.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.5"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.5"; level 2; havana_gene "OTTHUMG00000140350.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
194 chr22 HAVANA transcript 16389485 16389602 . - . gene_id "ENSG00000230643.1"; transcript_id "ENST00000447704.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.5-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140350.1"; havana_transcript "OTTHUMT00000276997.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
195 chr22 HAVANA exon 16389485 16389602 . - . gene_id "ENSG00000230643.1"; transcript_id "ENST00000447704.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.5-001"; exon_number 1; exon_id "ENSE00001679861.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140350.1"; havana_transcript "OTTHUMT00000276997.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
196 chr22 HAVANA gene 16399957 16436527 . - . gene_id "ENSG00000237299.1"; transcript_id "ENSG00000237299.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.6"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.6"; level 2; havana_gene "OTTHUMG00000140352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
197 chr22 HAVANA transcript 16399957 16436527 . - . gene_id "ENSG00000237299.1"; transcript_id "ENST00000412729.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.6-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140352.2"; havana_transcript "OTTHUMT00000276999.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
198 chr22 HAVANA exon 16436356 16436527 . - . gene_id "ENSG00000237299.1"; transcript_id "ENST00000412729.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.6-001"; exon_number 1; exon_id "ENSE00001786241.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140352.2"; havana_transcript "OTTHUMT00000276999.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
199 chr22 HAVANA exon 16419337 16419517 . - . gene_id "ENSG00000237299.1"; transcript_id "ENST00000412729.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.6-001"; exon_number 2; exon_id "ENSE00001731660.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140352.2"; havana_transcript "OTTHUMT00000276999.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
200 chr22 HAVANA exon 16402177 16402351 . - . gene_id "ENSG00000237299.1"; transcript_id "ENST00000412729.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.6-001"; exon_number 3; exon_id "ENSE00001661178.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140352.2"; havana_transcript "OTTHUMT00000276999.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
201 chr22 HAVANA exon 16399957 16399996 . - . gene_id "ENSG00000237299.1"; transcript_id "ENST00000412729.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.6-001"; exon_number 4; exon_id "ENSE00001679901.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140352.2"; havana_transcript "OTTHUMT00000276999.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
202 chr22 HAVANA gene 16404698 16405874 . + . gene_id "ENSG00000213727.3"; transcript_id "ENSG00000213727.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.7"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.7"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000140354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
203 chr22 HAVANA transcript 16404698 16405874 . + . gene_id "ENSG00000213727.3"; transcript_id "ENST00000456143.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.7-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140354.1"; havana_transcript "OTTHUMT00000277007.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
204 chr22 HAVANA exon 16404698 16405874 . + . gene_id "ENSG00000213727.3"; transcript_id "ENST00000456143.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.7-001"; exon_number 1; exon_id "ENSE00001805059.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140354.1"; havana_transcript "OTTHUMT00000277007.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
205 chr22 HAVANA gene 16413687 16415946 . + . gene_id "ENSG00000215268.3"; transcript_id "ENSG00000215268.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.8"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.8"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000140355.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
206 chr22 HAVANA transcript 16413687 16415946 . + . gene_id "ENSG00000215268.3"; transcript_id "ENST00000417863.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.8"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.8-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140355.1"; havana_transcript "OTTHUMT00000277008.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
207 chr22 HAVANA exon 16413687 16415946 . + . gene_id "ENSG00000215268.3"; transcript_id "ENST00000417863.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60G3.8"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60G3.8-001"; exon_number 1; exon_id "ENSE00001699940.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140355.1"; havana_transcript "OTTHUMT00000277008.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
208 chr22 HAVANA gene 16417269 16420386 . + . gene_id "ENSG00000233408.1"; transcript_id "ENSG00000233408.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "LA16c-23H5.4"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "LA16c-23H5.4"; level 2; havana_gene "OTTHUMG00000030075.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
209 chr22 HAVANA transcript 16417269 16420386 . + . gene_id "ENSG00000233408.1"; transcript_id "ENST00000444162.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "LA16c-23H5.4"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "LA16c-23H5.4-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000030075.2"; havana_transcript "OTTHUMT00000074929.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
210 chr22 HAVANA exon 16417269 16417438 . + . gene_id "ENSG00000233408.1"; transcript_id "ENST00000444162.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "LA16c-23H5.4"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "LA16c-23H5.4-004"; exon_number 1; exon_id "ENSE00001603731.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030075.2"; havana_transcript "OTTHUMT00000074929.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
211 chr22 HAVANA exon 16417699 16417807 . + . gene_id "ENSG00000233408.1"; transcript_id "ENST00000444162.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "LA16c-23H5.4"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "LA16c-23H5.4-004"; exon_number 2; exon_id "ENSE00001744768.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030075.2"; havana_transcript "OTTHUMT00000074929.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
212 chr22 HAVANA exon 16419372 16420386 . + . gene_id "ENSG00000233408.1"; transcript_id "ENST00000444162.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "LA16c-23H5.4"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "LA16c-23H5.4-004"; exon_number 3; exon_id "ENSE00001769489.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030075.2"; havana_transcript "OTTHUMT00000074929.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
213 chr22 HAVANA gene 16424125 16427059 . + . gene_id "ENSG00000235759.1"; transcript_id "ENSG00000235759.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ARHGAP42P3"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "ARHGAP42P3"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000140358.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
214 chr22 HAVANA transcript 16424125 16427059 . + . gene_id "ENSG00000235759.1"; transcript_id "ENST00000443989.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ARHGAP42P3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ARHGAP42P3-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140358.3"; havana_transcript "OTTHUMT00000277011.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
215 chr22 HAVANA exon 16424125 16424272 . + . gene_id "ENSG00000235759.1"; transcript_id "ENST00000443989.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ARHGAP42P3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ARHGAP42P3-001"; exon_number 1; exon_id "ENSE00001625927.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140358.3"; havana_transcript "OTTHUMT00000277011.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
216 chr22 HAVANA exon 16424377 16424752 . + . gene_id "ENSG00000235759.1"; transcript_id "ENST00000443989.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ARHGAP42P3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ARHGAP42P3-001"; exon_number 2; exon_id "ENSE00001675568.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140358.3"; havana_transcript "OTTHUMT00000277011.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
217 chr22 HAVANA exon 16425076 16427059 . + . gene_id "ENSG00000235759.1"; transcript_id "ENST00000443989.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ARHGAP42P3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ARHGAP42P3-001"; exon_number 3; exon_id "ENSE00001706709.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140358.3"; havana_transcript "OTTHUMT00000277011.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
218 chr22 HAVANA gene 16448824 16449805 . - . gene_id "ENSG00000130538.4"; transcript_id "ENSG00000130538.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OR11H1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "OR11H1"; level 2; havana_gene "OTTHUMG00000030069.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
219 chr22 HAVANA transcript 16448824 16449805 . - . gene_id "ENSG00000130538.4"; transcript_id "ENST00000252835.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OR11H1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "OR11H1-003"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33594.1"; havana_gene "OTTHUMG00000030069.2"; havana_transcript "OTTHUMT00000074923.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
220 chr22 HAVANA exon 16448824 16449805 . - . gene_id "ENSG00000130538.4"; transcript_id "ENST00000252835.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OR11H1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "OR11H1-003"; exon_number 1; exon_id "ENSE00000896763.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33594.1"; havana_gene "OTTHUMG00000030069.2"; havana_transcript "OTTHUMT00000074923.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
221 chr22 HAVANA CDS 16448827 16449804 . - 0 gene_id "ENSG00000130538.4"; transcript_id "ENST00000252835.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OR11H1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "OR11H1-003"; exon_number 1; exon_id "ENSE00000896763.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33594.1"; havana_gene "OTTHUMG00000030069.2"; havana_transcript "OTTHUMT00000074923.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
222 chr22 HAVANA start_codon 16449802 16449804 . - 0 gene_id "ENSG00000130538.4"; transcript_id "ENST00000252835.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OR11H1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "OR11H1-003"; exon_number 1; exon_id "ENSE00000896763.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33594.1"; havana_gene "OTTHUMG00000030069.2"; havana_transcript "OTTHUMT00000074923.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
223 chr22 HAVANA stop_codon 16448824 16448826 . - 0 gene_id "ENSG00000130538.4"; transcript_id "ENST00000252835.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OR11H1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "OR11H1-003"; exon_number 1; exon_id "ENSE00000896763.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33594.1"; havana_gene "OTTHUMG00000030069.2"; havana_transcript "OTTHUMT00000074923.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
224 chr22 HAVANA UTR 16448824 16448826 . - . gene_id "ENSG00000130538.4"; transcript_id "ENST00000252835.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OR11H1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "OR11H1-003"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33594.1"; havana_gene "OTTHUMG00000030069.2"; havana_transcript "OTTHUMT00000074923.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
225 chr22 HAVANA UTR 16449805 16449805 . - . gene_id "ENSG00000130538.4"; transcript_id "ENST00000252835.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OR11H1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "OR11H1-003"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33594.1"; havana_gene "OTTHUMG00000030069.2"; havana_transcript "OTTHUMT00000074923.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
226 chr22 HAVANA gene 16485399 16487973 . - . gene_id "ENSG00000236831.1"; transcript_id "ENSG00000236831.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "YME1L1P1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "YME1L1P1"; level 2; havana_gene "OTTHUMG00000140356.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
227 chr22 HAVANA transcript 16485399 16487973 . - . gene_id "ENSG00000236831.1"; transcript_id "ENST00000429435.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "YME1L1P1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "YME1L1P1-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140356.1"; havana_transcript "OTTHUMT00000277009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
228 chr22 HAVANA exon 16487832 16487973 . - . gene_id "ENSG00000236831.1"; transcript_id "ENST00000429435.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "YME1L1P1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "YME1L1P1-001"; exon_number 1; exon_id "ENSE00001779460.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140356.1"; havana_transcript "OTTHUMT00000277009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
229 chr22 HAVANA exon 16487016 16487091 . - . gene_id "ENSG00000236831.1"; transcript_id "ENST00000429435.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "YME1L1P1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "YME1L1P1-001"; exon_number 2; exon_id "ENSE00001596746.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140356.1"; havana_transcript "OTTHUMT00000277009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
230 chr22 HAVANA exon 16485399 16485477 . - . gene_id "ENSG00000236831.1"; transcript_id "ENST00000429435.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "YME1L1P1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "YME1L1P1-001"; exon_number 3; exon_id "ENSE00001766235.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140356.1"; havana_transcript "OTTHUMT00000277009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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231 chr22 ENSEMBL gene 16569924 16570006 . - . gene_id "ENSG00000265406.1"; transcript_id "ENSG00000265406.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP000539.3"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP000539.3"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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232 chr22 ENSEMBL transcript 16569924 16570006 . - . gene_id "ENSG00000265406.1"; transcript_id "ENST00000583607.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP000539.3"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP000539.3-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
233 chr22 ENSEMBL exon 16569924 16570006 . - . gene_id "ENSG00000265406.1"; transcript_id "ENST00000583607.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP000539.3"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP000539.3-201"; exon_number 1; exon_id "ENSE00002727299.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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234 chr22 ENSEMBL gene 16575148 16575230 . - . gene_id "ENSG00000264612.1"; transcript_id "ENSG00000264612.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP000539.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP000539.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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235 chr22 ENSEMBL transcript 16575148 16575230 . - . gene_id "ENSG00000264612.1"; transcript_id "ENST00000584802.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP000539.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP000539.1-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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236 chr22 ENSEMBL exon 16575148 16575230 . - . gene_id "ENSG00000264612.1"; transcript_id "ENST00000584802.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP000539.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP000539.1-201"; exon_number 1; exon_id "ENSE00002731036.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
237 chr22 ENSEMBL gene 16576109 16576191 . - . gene_id "ENSG00000265270.1"; transcript_id "ENSG00000265270.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP000539.2"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP000539.2"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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238 chr22 ENSEMBL transcript 16576109 16576191 . - . gene_id "ENSG00000265270.1"; transcript_id "ENST00000581323.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP000539.2"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP000539.2-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
239 chr22 ENSEMBL exon 16576109 16576191 . - . gene_id "ENSG00000265270.1"; transcript_id "ENST00000581323.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP000539.2"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP000539.2-201"; exon_number 1; exon_id "ENSE00002703356.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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240 chr22 HAVANA gene 16627920 16628496 . - . gene_id "ENSG00000236097.1"; transcript_id "ENSG00000236097.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BNIP3P2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "BNIP3P2"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000155642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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241 chr22 HAVANA transcript 16627920 16628496 . - . gene_id "ENSG00000236097.1"; transcript_id "ENST00000441221.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BNIP3P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "BNIP3P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155642.1"; havana_transcript "OTTHUMT00000340948.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
242 chr22 HAVANA exon 16627920 16628496 . - . gene_id "ENSG00000236097.1"; transcript_id "ENST00000441221.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BNIP3P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "BNIP3P2-001"; exon_number 1; exon_id "ENSE00001722896.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155642.1"; havana_transcript "OTTHUMT00000340948.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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243 chr22 HAVANA gene 16634898 16651926 . + . gene_id "ENSG00000184624.4"; transcript_id "ENSG00000184624.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZNF72P"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "ZNF72P"; level 2; havana_gene "OTTHUMG00000140359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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244 chr22 HAVANA transcript 16634898 16651926 . + . gene_id "ENSG00000184624.4"; transcript_id "ENST00000425869.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZNF72P"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ZNF72P-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140359.1"; havana_transcript "OTTHUMT00000277012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
245 chr22 HAVANA exon 16634898 16635018 . + . gene_id "ENSG00000184624.4"; transcript_id "ENST00000425869.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZNF72P"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ZNF72P-001"; exon_number 1; exon_id "ENSE00001665783.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140359.1"; havana_transcript "OTTHUMT00000277012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
246 chr22 HAVANA exon 16635537 16635603 . + . gene_id "ENSG00000184624.4"; transcript_id "ENST00000425869.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZNF72P"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ZNF72P-001"; exon_number 2; exon_id "ENSE00001594594.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140359.1"; havana_transcript "OTTHUMT00000277012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
247 chr22 HAVANA exon 16650207 16651926 . + . gene_id "ENSG00000184624.4"; transcript_id "ENST00000425869.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZNF72P"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ZNF72P-001"; exon_number 3; exon_id "ENSE00001646539.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140359.1"; havana_transcript "OTTHUMT00000277012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
248 chr22 HAVANA gene 16680767 16687245 . - . gene_id "ENSG00000236235.1"; transcript_id "ENSG00000236235.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-13E4.3"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-13E4.3"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000140362.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
249 chr22 HAVANA transcript 16680767 16687245 . - . gene_id "ENSG00000236235.1"; transcript_id "ENST00000448473.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-13E4.3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-13E4.3-001"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140362.1"; havana_transcript "OTTHUMT00000277035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
250 chr22 HAVANA exon 16687127 16687245 . - . gene_id "ENSG00000236235.1"; transcript_id "ENST00000448473.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-13E4.3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-13E4.3-001"; exon_number 1; exon_id "ENSE00001782524.1"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140362.1"; havana_transcript "OTTHUMT00000277035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
251 chr22 HAVANA exon 16686939 16686968 . - . gene_id "ENSG00000236235.1"; transcript_id "ENST00000448473.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-13E4.3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-13E4.3-001"; exon_number 2; exon_id "ENSE00001723295.1"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140362.1"; havana_transcript "OTTHUMT00000277035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
252 chr22 HAVANA exon 16682553 16682631 . - . gene_id "ENSG00000236235.1"; transcript_id "ENST00000448473.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-13E4.3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-13E4.3-001"; exon_number 3; exon_id "ENSE00001625165.1"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140362.1"; havana_transcript "OTTHUMT00000277035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
253 chr22 HAVANA exon 16682131 16682233 . - . gene_id "ENSG00000236235.1"; transcript_id "ENST00000448473.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-13E4.3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-13E4.3-001"; exon_number 4; exon_id "ENSE00001739422.1"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140362.1"; havana_transcript "OTTHUMT00000277035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
254 chr22 HAVANA exon 16680767 16680806 . - . gene_id "ENSG00000236235.1"; transcript_id "ENST00000448473.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-13E4.3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-13E4.3-001"; exon_number 5; exon_id "ENSE00001734865.1"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140362.1"; havana_transcript "OTTHUMT00000277035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
255 chr22 HAVANA gene 16868420 16871613 . + . gene_id "ENSG00000225293.1"; transcript_id "ENSG00000225293.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABCD1P4"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "ABCD1P4"; level 2; havana_gene "OTTHUMG00000030330.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
256 chr22 HAVANA transcript 16868420 16871613 . + . gene_id "ENSG00000225293.1"; transcript_id "ENST00000399687.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABCD1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ABCD1P4-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000030330.3"; havana_transcript "OTTHUMT00000075218.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
257 chr22 HAVANA exon 16868420 16868565 . + . gene_id "ENSG00000225293.1"; transcript_id "ENST00000399687.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABCD1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ABCD1P4-001"; exon_number 1; exon_id "ENSE00001799661.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000030330.3"; havana_transcript "OTTHUMT00000075218.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
258 chr22 HAVANA exon 16870862 16870946 . + . gene_id "ENSG00000225293.1"; transcript_id "ENST00000399687.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABCD1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ABCD1P4-001"; exon_number 2; exon_id "ENSE00001691845.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000030330.3"; havana_transcript "OTTHUMT00000075218.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
259 chr22 HAVANA exon 16871096 16871221 . + . gene_id "ENSG00000225293.1"; transcript_id "ENST00000399687.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABCD1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ABCD1P4-001"; exon_number 3; exon_id "ENSE00001672952.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000030330.3"; havana_transcript "OTTHUMT00000075218.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
260 chr22 HAVANA exon 16871367 16871613 . + . gene_id "ENSG00000225293.1"; transcript_id "ENST00000399687.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABCD1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ABCD1P4-001"; exon_number 4; exon_id "ENSE00001798781.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000030330.3"; havana_transcript "OTTHUMT00000075218.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
261 chr22 HAVANA gene 16886056 16886143 . + . gene_id "ENSG00000226160.1"; transcript_id "ENSG00000226160.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-17H1.3"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-17H1.3"; level 2; havana_gene "OTTHUMG00000140366.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
262 chr22 HAVANA transcript 16886056 16886143 . + . gene_id "ENSG00000226160.1"; transcript_id "ENST00000427602.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-17H1.3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-17H1.3-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000140366.1"; havana_transcript "OTTHUMT00000277045.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
263 chr22 HAVANA exon 16886056 16886143 . + . gene_id "ENSG00000226160.1"; transcript_id "ENST00000427602.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-17H1.3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-17H1.3-001"; exon_number 1; exon_id "ENSE00001625751.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000140366.1"; havana_transcript "OTTHUMT00000277045.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
264 chr22 HAVANA gene 16904668 16906756 . + . gene_id "ENSG00000229658.1"; transcript_id "ENSG00000229658.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PABPC1P9"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "PABPC1P9"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000140367.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
265 chr22 HAVANA transcript 16904668 16906756 . + . gene_id "ENSG00000229658.1"; transcript_id "ENST00000426076.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PABPC1P9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PABPC1P9-001"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140367.2"; havana_transcript "OTTHUMT00000277046.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
266 chr22 HAVANA exon 16904668 16904833 . + . gene_id "ENSG00000229658.1"; transcript_id "ENST00000426076.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PABPC1P9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PABPC1P9-001"; exon_number 1; exon_id "ENSE00001616608.1"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140367.2"; havana_transcript "OTTHUMT00000277046.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
267 chr22 HAVANA exon 16905250 16905937 . + . gene_id "ENSG00000229658.1"; transcript_id "ENST00000426076.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PABPC1P9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PABPC1P9-001"; exon_number 2; exon_id "ENSE00001729068.1"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140367.2"; havana_transcript "OTTHUMT00000277046.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
268 chr22 HAVANA exon 16905970 16906213 . + . gene_id "ENSG00000229658.1"; transcript_id "ENST00000426076.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PABPC1P9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PABPC1P9-001"; exon_number 3; exon_id "ENSE00001752970.1"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140367.2"; havana_transcript "OTTHUMT00000277046.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
269 chr22 HAVANA exon 16906243 16906756 . + . gene_id "ENSG00000229658.1"; transcript_id "ENST00000426076.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PABPC1P9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PABPC1P9-001"; exon_number 4; exon_id "ENSE00001606166.1"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140367.2"; havana_transcript "OTTHUMT00000277046.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
270 chr22 HAVANA gene 16909690 16957613 . - . gene_id "ENSG00000227367.1"; transcript_id "ENSG00000227367.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC9B1P4"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "SLC9B1P4"; level 2; havana_gene "OTTHUMG00000140399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
271 chr22 HAVANA transcript 16909690 16957613 . - . gene_id "ENSG00000227367.1"; transcript_id "ENST00000421957.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC9B1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC9B1P4-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140399.1"; havana_transcript "OTTHUMT00000277201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
272 chr22 HAVANA exon 16957442 16957613 . - . gene_id "ENSG00000227367.1"; transcript_id "ENST00000421957.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC9B1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC9B1P4-001"; exon_number 1; exon_id "ENSE00001666715.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140399.1"; havana_transcript "OTTHUMT00000277201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
273 chr22 HAVANA exon 16954829 16954970 . - . gene_id "ENSG00000227367.1"; transcript_id "ENST00000421957.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC9B1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC9B1P4-001"; exon_number 2; exon_id "ENSE00001754042.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140399.1"; havana_transcript "OTTHUMT00000277201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
274 chr22 HAVANA exon 16953593 16953719 . - . gene_id "ENSG00000227367.1"; transcript_id "ENST00000421957.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC9B1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC9B1P4-001"; exon_number 3; exon_id "ENSE00001671201.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140399.1"; havana_transcript "OTTHUMT00000277201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
275 chr22 HAVANA exon 16940672 16940846 . - . gene_id "ENSG00000227367.1"; transcript_id "ENST00000421957.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC9B1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC9B1P4-001"; exon_number 4; exon_id "ENSE00001767092.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140399.1"; havana_transcript "OTTHUMT00000277201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
276 chr22 HAVANA exon 16920053 16920131 . - . gene_id "ENSG00000227367.1"; transcript_id "ENST00000421957.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC9B1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC9B1P4-001"; exon_number 5; exon_id "ENSE00001695368.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140399.1"; havana_transcript "OTTHUMT00000277201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
277 chr22 HAVANA exon 16919027 16919177 . - . gene_id "ENSG00000227367.1"; transcript_id "ENST00000421957.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC9B1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC9B1P4-001"; exon_number 6; exon_id "ENSE00001643934.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140399.1"; havana_transcript "OTTHUMT00000277201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
278 chr22 HAVANA exon 16915106 16915196 . - . gene_id "ENSG00000227367.1"; transcript_id "ENST00000421957.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC9B1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC9B1P4-001"; exon_number 7; exon_id "ENSE00001719021.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140399.1"; havana_transcript "OTTHUMT00000277201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
279 chr22 HAVANA exon 16914068 16914203 . - . gene_id "ENSG00000227367.1"; transcript_id "ENST00000421957.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC9B1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC9B1P4-001"; exon_number 8; exon_id "ENSE00001782535.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140399.1"; havana_transcript "OTTHUMT00000277201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
280 chr22 HAVANA exon 16909690 16909904 . - . gene_id "ENSG00000227367.1"; transcript_id "ENST00000421957.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC9B1P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC9B1P4-001"; exon_number 9; exon_id "ENSE00001557721.2"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140399.1"; havana_transcript "OTTHUMT00000277201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
281 chr22 HAVANA gene 16967410 16969212 . + . gene_id "ENSG00000226444.1"; transcript_id "ENSG00000226444.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ACTR3BP6"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "ACTR3BP6"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000140398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
282 chr22 HAVANA transcript 16967410 16968778 . + . gene_id "ENSG00000226444.1"; transcript_id "ENST00000422332.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ACTR3BP6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ACTR3BP6-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140398.1"; havana_transcript "OTTHUMT00000277200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
283 chr22 HAVANA exon 16967410 16967452 . + . gene_id "ENSG00000226444.1"; transcript_id "ENST00000422332.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ACTR3BP6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ACTR3BP6-001"; exon_number 1; exon_id "ENSE00001616995.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140398.1"; havana_transcript "OTTHUMT00000277200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
284 chr22 HAVANA exon 16967581 16968778 . + . gene_id "ENSG00000226444.1"; transcript_id "ENST00000422332.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ACTR3BP6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ACTR3BP6-001"; exon_number 2; exon_id "ENSE00001776473.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140398.1"; havana_transcript "OTTHUMT00000277200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
285 chr22 ENSEMBL transcript 16967893 16969212 . + . gene_id "ENSG00000226444.1"; transcript_id "ENST00000421366.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ACTR3BP6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ACTR3BP6-201"; level 3; havana_gene "OTTHUMG00000140398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
286 chr22 ENSEMBL exon 16967893 16969212 . + . gene_id "ENSG00000226444.1"; transcript_id "ENST00000421366.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ACTR3BP6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ACTR3BP6-201"; exon_number 1; exon_id "ENSE00002299648.1"; level 3; havana_gene "OTTHUMG00000140398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
287 chr22 HAVANA gene 16984194 16990365 . + . gene_id "ENSG00000235969.1"; transcript_id "ENSG00000235969.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CHEK2P4"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "CHEK2P4"; level 2; havana_gene "OTTHUMG00000140400.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
288 chr22 HAVANA transcript 16984194 16990365 . + . gene_id "ENSG00000235969.1"; transcript_id "ENST00000450340.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CHEK2P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CHEK2P4-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140400.1"; havana_transcript "OTTHUMT00000277202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
289 chr22 HAVANA exon 16984194 16984266 . + . gene_id "ENSG00000235969.1"; transcript_id "ENST00000450340.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CHEK2P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CHEK2P4-001"; exon_number 1; exon_id "ENSE00001677472.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140400.1"; havana_transcript "OTTHUMT00000277202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
290 chr22 HAVANA exon 16989045 16989129 . + . gene_id "ENSG00000235969.1"; transcript_id "ENST00000450340.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CHEK2P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CHEK2P4-001"; exon_number 2; exon_id "ENSE00001767761.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140400.1"; havana_transcript "OTTHUMT00000277202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
291 chr22 HAVANA exon 16990278 16990365 . + . gene_id "ENSG00000235969.1"; transcript_id "ENST00000450340.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CHEK2P4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CHEK2P4-001"; exon_number 3; exon_id "ENSE00001608172.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140400.1"; havana_transcript "OTTHUMT00000277202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
292 chr22 HAVANA gene 17001949 17008127 . + . gene_id "ENSG00000273362.1"; transcript_id "ENSG00000273362.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-67B5.17"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "KB-67B5.17"; level 2; havana_gene "OTTHUMG00000186094.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
293 chr22 HAVANA transcript 17001949 17008127 . + . gene_id "ENSG00000273362.1"; transcript_id "ENST00000609641.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-67B5.17"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-67B5.17-001"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000186094.1"; havana_transcript "OTTHUMT00000472243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
294 chr22 HAVANA exon 17001949 17002179 . + . gene_id "ENSG00000273362.1"; transcript_id "ENST00000609641.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-67B5.17"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-67B5.17-001"; exon_number 1; exon_id "ENSE00003706382.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000186094.1"; havana_transcript "OTTHUMT00000472243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
295 chr22 HAVANA exon 17006837 17007003 . + . gene_id "ENSG00000273362.1"; transcript_id "ENST00000609641.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-67B5.17"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-67B5.17-001"; exon_number 2; exon_id "ENSE00003707054.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000186094.1"; havana_transcript "OTTHUMT00000472243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
296 chr22 HAVANA exon 17007865 17008127 . + . gene_id "ENSG00000273362.1"; transcript_id "ENST00000609641.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-67B5.17"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-67B5.17-001"; exon_number 3; exon_id "ENSE00003702906.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000186094.1"; havana_transcript "OTTHUMT00000472243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
297 chr22 HAVANA gene 17052917 17055527 . + . gene_id "ENSG00000233995.1"; transcript_id "ENSG00000233995.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-67B5.12"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "KB-67B5.12"; level 2; havana_gene "OTTHUMG00000141256.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
298 chr22 HAVANA transcript 17052917 17055527 . + . gene_id "ENSG00000233995.1"; transcript_id "ENST00000454360.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-67B5.12"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-67B5.12-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000141256.1"; havana_transcript "OTTHUMT00000280392.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
299 chr22 HAVANA exon 17052917 17053040 . + . gene_id "ENSG00000233995.1"; transcript_id "ENST00000454360.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-67B5.12"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-67B5.12-001"; exon_number 1; exon_id "ENSE00001732752.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000141256.1"; havana_transcript "OTTHUMT00000280392.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
300 chr22 HAVANA exon 17053598 17053643 . + . gene_id "ENSG00000233995.1"; transcript_id "ENST00000454360.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-67B5.12"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-67B5.12-001"; exon_number 2; exon_id "ENSE00001623204.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000141256.1"; havana_transcript "OTTHUMT00000280392.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
301 chr22 HAVANA exon 17053934 17054102 . + . gene_id "ENSG00000233995.1"; transcript_id "ENST00000454360.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-67B5.12"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-67B5.12-001"; exon_number 3; exon_id "ENSE00001597534.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000141256.1"; havana_transcript "OTTHUMT00000280392.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
302 chr22 HAVANA exon 17054312 17054417 . + . gene_id "ENSG00000233995.1"; transcript_id "ENST00000454360.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-67B5.12"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-67B5.12-001"; exon_number 4; exon_id "ENSE00001739921.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000141256.1"; havana_transcript "OTTHUMT00000280392.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
303 chr22 HAVANA exon 17055356 17055527 . + . gene_id "ENSG00000233995.1"; transcript_id "ENST00000454360.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-67B5.12"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-67B5.12-001"; exon_number 5; exon_id "ENSE00001596670.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000141256.1"; havana_transcript "OTTHUMT00000280392.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
304 chr22 HAVANA gene 17061816 17063607 . - . gene_id "ENSG00000239435.1"; transcript_id "ENSG00000239435.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KCNMB3P1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "KCNMB3P1"; level 2; havana_gene "OTTHUMG00000141303.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
305 chr22 HAVANA transcript 17061816 17063607 . - . gene_id "ENSG00000239435.1"; transcript_id "ENST00000493696.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KCNMB3P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KCNMB3P1-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000141303.2"; havana_transcript "OTTHUMT00000280581.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
306 chr22 HAVANA exon 17063400 17063607 . - . gene_id "ENSG00000239435.1"; transcript_id "ENST00000493696.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KCNMB3P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KCNMB3P1-001"; exon_number 1; exon_id "ENSE00001930505.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000141303.2"; havana_transcript "OTTHUMT00000280581.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
307 chr22 HAVANA exon 17061816 17062179 . - . gene_id "ENSG00000239435.1"; transcript_id "ENST00000493696.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KCNMB3P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KCNMB3P1-001"; exon_number 2; exon_id "ENSE00001839032.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000141303.2"; havana_transcript "OTTHUMT00000280581.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
308 chr22 HAVANA transcript 17061967 17063492 . - . gene_id "ENSG00000239435.1"; transcript_id "ENST00000472972.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KCNMB3P1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KCNMB3P1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000141303.2"; havana_transcript "OTTHUMT00000329122.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
309 chr22 HAVANA exon 17063397 17063492 . - . gene_id "ENSG00000239435.1"; transcript_id "ENST00000472972.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KCNMB3P1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KCNMB3P1-002"; exon_number 1; exon_id "ENSE00001937172.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000141303.2"; havana_transcript "OTTHUMT00000329122.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
310 chr22 HAVANA exon 17061967 17062177 . - . gene_id "ENSG00000239435.1"; transcript_id "ENST00000472972.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KCNMB3P1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KCNMB3P1-002"; exon_number 2; exon_id "ENSE00001878881.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000141303.2"; havana_transcript "OTTHUMT00000329122.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
311 chr22 HAVANA gene 17071667 17073700 . - . gene_id "ENSG00000198445.3"; transcript_id "ENSG00000198445.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8L2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCT8L2"; level 2; havana_gene "OTTHUMG00000141302.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
312 chr22 HAVANA transcript 17071667 17073700 . - . gene_id "ENSG00000198445.3"; transcript_id "ENST00000359963.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8L2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCT8L2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13738.1"; havana_gene "OTTHUMG00000141302.1"; havana_transcript "OTTHUMT00000280580.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
313 chr22 HAVANA exon 17071667 17073700 . - . gene_id "ENSG00000198445.3"; transcript_id "ENST00000359963.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8L2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCT8L2-001"; exon_number 1; exon_id "ENSE00001806026.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13738.1"; havana_gene "OTTHUMG00000141302.1"; havana_transcript "OTTHUMT00000280580.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
314 chr22 HAVANA CDS 17071770 17073440 . - 0 gene_id "ENSG00000198445.3"; transcript_id "ENST00000359963.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8L2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCT8L2-001"; exon_number 1; exon_id "ENSE00001806026.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13738.1"; havana_gene "OTTHUMG00000141302.1"; havana_transcript "OTTHUMT00000280580.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
315 chr22 HAVANA start_codon 17073438 17073440 . - 0 gene_id "ENSG00000198445.3"; transcript_id "ENST00000359963.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8L2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCT8L2-001"; exon_number 1; exon_id "ENSE00001806026.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13738.1"; havana_gene "OTTHUMG00000141302.1"; havana_transcript "OTTHUMT00000280580.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
316 chr22 HAVANA stop_codon 17071767 17071769 . - 0 gene_id "ENSG00000198445.3"; transcript_id "ENST00000359963.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8L2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCT8L2-001"; exon_number 1; exon_id "ENSE00001806026.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13738.1"; havana_gene "OTTHUMG00000141302.1"; havana_transcript "OTTHUMT00000280580.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
317 chr22 HAVANA UTR 17071667 17071769 . - . gene_id "ENSG00000198445.3"; transcript_id "ENST00000359963.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8L2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCT8L2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13738.1"; havana_gene "OTTHUMG00000141302.1"; havana_transcript "OTTHUMT00000280580.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
318 chr22 HAVANA UTR 17073441 17073700 . - . gene_id "ENSG00000198445.3"; transcript_id "ENST00000359963.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8L2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCT8L2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13738.1"; havana_gene "OTTHUMG00000141302.1"; havana_transcript "OTTHUMT00000280580.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
319 chr22 HAVANA gene 17075979 17076375 . - . gene_id "ENSG00000240122.1"; transcript_id "ENSG00000240122.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "FABP5P11"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "FABP5P11"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150095.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
320 chr22 HAVANA transcript 17075979 17076375 . - . gene_id "ENSG00000240122.1"; transcript_id "ENST00000430910.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "FABP5P11"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "FABP5P11-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150095.1"; havana_transcript "OTTHUMT00000316231.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
321 chr22 HAVANA exon 17075979 17076375 . - . gene_id "ENSG00000240122.1"; transcript_id "ENST00000430910.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "FABP5P11"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "FABP5P11-001"; exon_number 1; exon_id "ENSE00001596581.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150095.1"; havana_transcript "OTTHUMT00000316231.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
322 chr22 ENSEMBL gene 17079607 17079694 . - . gene_id "ENSG00000221084.1"; transcript_id "ENSG00000221084.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP000547.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP000547.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
323 chr22 ENSEMBL transcript 17079607 17079694 . - . gene_id "ENSG00000221084.1"; transcript_id "ENST00000408157.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP000547.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP000547.1-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
324 chr22 ENSEMBL exon 17079607 17079694 . - . gene_id "ENSG00000221084.1"; transcript_id "ENST00000408157.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP000547.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP000547.1-201"; exon_number 1; exon_id "ENSE00001809101.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
325 chr22 HAVANA gene 17082777 17179632 . + . gene_id "ENSG00000100181.17"; transcript_id "ENSG00000100181.17"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "TPTEP1"; level 2; havana_gene "OTTHUMG00000141300.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
326 chr22 HAVANA transcript 17082777 17179632 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000558085.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-006"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000419147.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
327 chr22 HAVANA exon 17082777 17083105 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000558085.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-006"; exon_number 1; exon_id "ENSE00002570186.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000419147.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
328 chr22 HAVANA exon 17119469 17119630 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000558085.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-006"; exon_number 2; exon_id "ENSE00001605063.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000419147.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
329 chr22 HAVANA exon 17178386 17179632 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000558085.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-006"; exon_number 3; exon_id "ENSE00002538847.2"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000419147.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
330 chr22 HAVANA transcript 17082801 17096001 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000592918.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-008"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459901.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
331 chr22 HAVANA exon 17082801 17083105 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000592918.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-008"; exon_number 1; exon_id "ENSE00001543740.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459901.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
332 chr22 HAVANA exon 17092548 17092783 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000592918.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-008"; exon_number 2; exon_id "ENSE00001709657.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459901.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
333 chr22 HAVANA exon 17094967 17096001 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000592918.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-008"; exon_number 3; exon_id "ENSE00002924237.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459901.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
334 chr22 HAVANA transcript 17082801 17129720 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000400593.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-001"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280574.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
335 chr22 HAVANA exon 17082801 17083105 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000400593.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-001"; exon_number 1; exon_id "ENSE00001543740.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280574.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
336 chr22 HAVANA exon 17092548 17092783 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000400593.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-001"; exon_number 2; exon_id "ENSE00001709657.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280574.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
337 chr22 HAVANA exon 17094967 17095068 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000400593.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-001"; exon_number 3; exon_id "ENSE00001796423.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280574.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
338 chr22 HAVANA exon 17103731 17103787 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000400593.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-001"; exon_number 4; exon_id "ENSE00001543732.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280574.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
339 chr22 HAVANA exon 17117930 17117980 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000400593.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-001"; exon_number 5; exon_id "ENSE00001696455.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280574.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
340 chr22 HAVANA exon 17119469 17119630 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000400593.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-001"; exon_number 6; exon_id "ENSE00001605063.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280574.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
341 chr22 HAVANA exon 17128058 17128147 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000400593.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-001"; exon_number 7; exon_id "ENSE00001752794.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280574.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
342 chr22 HAVANA exon 17128553 17128675 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000400593.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-001"; exon_number 8; exon_id "ENSE00001688048.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280574.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
343 chr22 HAVANA exon 17129417 17129720 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000400593.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-001"; exon_number 9; exon_id "ENSE00001788422.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280574.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
344 chr22 HAVANA transcript 17082838 17096001 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000592107.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-009"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459902.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
345 chr22 HAVANA exon 17082838 17083105 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000592107.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-009"; exon_number 1; exon_id "ENSE00002911043.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459902.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
346 chr22 HAVANA exon 17092548 17092783 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000592107.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-009"; exon_number 2; exon_id "ENSE00001709657.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459902.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
347 chr22 HAVANA exon 17094967 17095068 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000592107.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-009"; exon_number 3; exon_id "ENSE00001796423.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459902.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
348 chr22 HAVANA exon 17095589 17096001 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000592107.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-009"; exon_number 4; exon_id "ENSE00002871438.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459902.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
349 chr22 HAVANA transcript 17082934 17134699 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000426585.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
350 chr22 HAVANA exon 17082934 17083105 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000426585.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-002"; exon_number 1; exon_id "ENSE00001675045.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
351 chr22 HAVANA exon 17103731 17103787 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000426585.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-002"; exon_number 2; exon_id "ENSE00001543732.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
352 chr22 HAVANA exon 17117930 17117980 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000426585.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-002"; exon_number 3; exon_id "ENSE00001696455.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
353 chr22 HAVANA exon 17119469 17119630 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000426585.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-002"; exon_number 4; exon_id "ENSE00001605063.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
354 chr22 HAVANA exon 17129417 17134699 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000426585.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-002"; exon_number 5; exon_id "ENSE00001613048.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
355 chr22 HAVANA transcript 17082940 17095223 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000591299.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-005"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000286440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
356 chr22 HAVANA exon 17082940 17083105 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000591299.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-005"; exon_number 1; exon_id "ENSE00002800237.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000286440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
357 chr22 HAVANA exon 17092548 17092783 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000591299.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-005"; exon_number 2; exon_id "ENSE00001709657.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000286440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
358 chr22 HAVANA exon 17094875 17095223 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000591299.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-005"; exon_number 3; exon_id "ENSE00002779343.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000286440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
359 chr22 HAVANA transcript 17093472 17095994 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000588548.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-010"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
360 chr22 HAVANA exon 17093472 17095994 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000588548.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-010"; exon_number 1; exon_id "ENSE00002951757.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
361 chr22 HAVANA transcript 17100505 17134582 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000383140.3"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-004"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
362 chr22 HAVANA exon 17100505 17100610 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000383140.3"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-004"; exon_number 1; exon_id "ENSE00001773127.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
363 chr22 HAVANA exon 17100942 17101050 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000383140.3"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-004"; exon_number 2; exon_id "ENSE00001782294.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
364 chr22 HAVANA exon 17103731 17103787 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000383140.3"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-004"; exon_number 3; exon_id "ENSE00001543732.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
365 chr22 HAVANA exon 17117930 17117980 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000383140.3"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-004"; exon_number 4; exon_id "ENSE00001696455.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
366 chr22 HAVANA exon 17119469 17119630 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000383140.3"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-004"; exon_number 5; exon_id "ENSE00001605063.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
367 chr22 HAVANA exon 17128495 17128675 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000383140.3"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-004"; exon_number 6; exon_id "ENSE00001788901.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
368 chr22 HAVANA exon 17129417 17129538 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000383140.3"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-004"; exon_number 7; exon_id "ENSE00001620549.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
369 chr22 HAVANA exon 17134400 17134582 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000383140.3"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-004"; exon_number 8; exon_id "ENSE00001649259.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
370 chr22 HAVANA transcript 17117910 17119870 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000585784.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-011"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
371 chr22 HAVANA exon 17117910 17117980 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000585784.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-011"; exon_number 1; exon_id "ENSE00002736492.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
372 chr22 HAVANA exon 17119469 17119870 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000585784.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-011"; exon_number 2; exon_id "ENSE00002896340.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
373 chr22 HAVANA transcript 17119469 17121627 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000588424.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-012"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
374 chr22 HAVANA exon 17119469 17119630 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000588424.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-012"; exon_number 1; exon_id "ENSE00001605063.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
375 chr22 HAVANA exon 17120188 17121627 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000588424.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-012"; exon_number 2; exon_id "ENSE00002923192.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000459905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
376 chr22 ENSEMBL transcript 17129698 17131830 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000545818.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-201"; level 3; havana_gene "OTTHUMG00000141300.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
377 chr22 ENSEMBL exon 17129698 17131830 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000545818.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-201"; exon_number 1; exon_id "ENSE00002290440.1"; level 3; havana_gene "OTTHUMG00000141300.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
378 chr22 HAVANA transcript 17130820 17134695 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000415121.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-003"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280576.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
379 chr22 HAVANA exon 17130820 17130851 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000415121.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-003"; exon_number 1; exon_id "ENSE00001798341.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280576.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
380 chr22 HAVANA exon 17133212 17133373 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000415121.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-003"; exon_number 2; exon_id "ENSE00001806015.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280576.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
381 chr22 HAVANA exon 17133823 17134695 . + . gene_id "ENSG00000100181.17"; transcript_id "ENST00000415121.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TPTEP1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TPTEP1-003"; exon_number 3; exon_id "ENSE00001762391.1"; level 2; havana_gene "OTTHUMG00000141300.6"; havana_transcript "OTTHUMT00000280576.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
382 chr22 HAVANA gene 17097060 17098004 . + . gene_id "ENSG00000267338.1"; transcript_id "ENSG00000267338.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-7G2.9"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "KB-7G2.9"; level 2; havana_gene "OTTHUMG00000182183.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
383 chr22 HAVANA transcript 17097060 17098004 . + . gene_id "ENSG00000267338.1"; transcript_id "ENST00000438850.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-7G2.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-7G2.9-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000182183.1"; havana_transcript "OTTHUMT00000459906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
384 chr22 HAVANA exon 17097060 17097236 . + . gene_id "ENSG00000267338.1"; transcript_id "ENST00000438850.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-7G2.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-7G2.9-001"; exon_number 1; exon_id "ENSE00001700739.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000182183.1"; havana_transcript "OTTHUMT00000459906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
385 chr22 HAVANA exon 17097636 17098004 . + . gene_id "ENSG00000267338.1"; transcript_id "ENST00000438850.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-7G2.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-7G2.9-001"; exon_number 2; exon_id "ENSE00001789206.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000182183.1"; havana_transcript "OTTHUMT00000459906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
386 chr22 HAVANA gene 17126585 17127471 . - . gene_id "ENSG00000249288.1"; transcript_id "ENSG00000249288.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC25A15P5"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "SLC25A15P5"; level 2; havana_gene "OTTHUMG00000142830.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
387 chr22 HAVANA transcript 17126585 17127471 . - . gene_id "ENSG00000249288.1"; transcript_id "ENST00000508033.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC25A15P5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC25A15P5-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000142830.1"; havana_transcript "OTTHUMT00000286441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
388 chr22 HAVANA exon 17127338 17127471 . - . gene_id "ENSG00000249288.1"; transcript_id "ENST00000508033.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC25A15P5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC25A15P5-001"; exon_number 1; exon_id "ENSE00002021604.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000142830.1"; havana_transcript "OTTHUMT00000286441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
389 chr22 HAVANA exon 17126585 17126703 . - . gene_id "ENSG00000249288.1"; transcript_id "ENST00000508033.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC25A15P5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC25A15P5-001"; exon_number 2; exon_id "ENSE00002032018.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000142830.1"; havana_transcript "OTTHUMT00000286441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
390 chr22 HAVANA gene 17134782 17140518 . - . gene_id "ENSG00000249263.2"; transcript_id "ENSG00000249263.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PARP4P3"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "PARP4P3"; level 2; havana_gene "OTTHUMG00000142831.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
391 chr22 HAVANA transcript 17134782 17140518 . - . gene_id "ENSG00000249263.2"; transcript_id "ENST00000510265.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PARP4P3"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PARP4P3-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000142831.4"; havana_transcript "OTTHUMT00000289791.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
392 chr22 HAVANA exon 17140387 17140518 . - . gene_id "ENSG00000249263.2"; transcript_id "ENST00000510265.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PARP4P3"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PARP4P3-001"; exon_number 1; exon_id "ENSE00003601172.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000142831.4"; havana_transcript "OTTHUMT00000289791.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
393 chr22 HAVANA exon 17134782 17134966 . - . gene_id "ENSG00000249263.2"; transcript_id "ENST00000510265.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PARP4P3"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PARP4P3-001"; exon_number 2; exon_id "ENSE00002047806.2"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000142831.4"; havana_transcript "OTTHUMT00000289791.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
394 chr22 HAVANA gene 17134956 17160374 . - . gene_id "ENSG00000189295.9"; transcript_id "ENSG00000189295.9"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "NOVEL"; transcript_name "ANKRD62P1-PARP4P3"; level 2; havana_gene "OTTHUMG00000186061.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
395 chr22 HAVANA transcript 17134956 17156430 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000456726.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-001"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
396 chr22 HAVANA exon 17156013 17156430 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000456726.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-001"; exon_number 1; exon_id "ENSE00001592270.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
397 chr22 HAVANA exon 17154490 17154642 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000456726.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-001"; exon_number 2; exon_id "ENSE00003620128.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
398 chr22 HAVANA exon 17152408 17152478 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000456726.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-001"; exon_number 3; exon_id "ENSE00003625905.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
399 chr22 HAVANA exon 17151107 17151151 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000456726.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-001"; exon_number 4; exon_id "ENSE00001685886.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
400 chr22 HAVANA exon 17150352 17150510 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000456726.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-001"; exon_number 5; exon_id "ENSE00001638194.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
401 chr22 HAVANA exon 17142366 17142445 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000456726.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-001"; exon_number 6; exon_id "ENSE00001740990.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
402 chr22 HAVANA exon 17140748 17140859 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000456726.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-001"; exon_number 7; exon_id "ENSE00001620353.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
403 chr22 HAVANA exon 17140387 17140518 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000456726.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-001"; exon_number 8; exon_id "ENSE00003478233.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
404 chr22 HAVANA exon 17134956 17134966 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000456726.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-001"; exon_number 9; exon_id "ENSE00001725000.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
405 chr22 HAVANA transcript 17150354 17156342 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000457060.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-002"; level 2; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418975.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
406 chr22 HAVANA exon 17156013 17156342 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000457060.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-002"; exon_number 1; exon_id "ENSE00001611736.1"; level 2; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418975.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
407 chr22 HAVANA exon 17152408 17152478 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000457060.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-002"; exon_number 2; exon_id "ENSE00003625905.1"; level 2; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418975.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
408 chr22 HAVANA exon 17151107 17151151 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000457060.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-002"; exon_number 3; exon_id "ENSE00001685886.1"; level 2; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418975.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
409 chr22 HAVANA exon 17150354 17150510 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000457060.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-002"; exon_number 4; exon_id "ENSE00001769991.1"; level 2; havana_gene "OTTHUMG00000186061.1"; havana_transcript "OTTHUMT00000418975.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
410 chr22 ENSEMBL transcript 17154451 17160374 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000338526.6"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000186061.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
411 chr22 ENSEMBL exon 17160182 17160374 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000338526.6"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-201"; exon_number 1; exon_id "ENSE00002313267.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000186061.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
412 chr22 ENSEMBL exon 17158083 17158266 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000338526.6"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-201"; exon_number 2; exon_id "ENSE00003478328.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000186061.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
413 chr22 ENSEMBL exon 17155997 17156936 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000338526.6"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-201"; exon_number 3; exon_id "ENSE00001380295.4"; level 3; tag "basic"; havana_gene "OTTHUMG00000186061.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
414 chr22 ENSEMBL exon 17154714 17154715 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000338526.6"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-201"; exon_number 4; exon_id "ENSE00001721241.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000186061.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
415 chr22 ENSEMBL exon 17154451 17154627 . - . gene_id "ENSG00000189295.9"; transcript_id "ENST00000338526.6"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "ANKRD62P1-PARP4P3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-PARP4P3-201"; exon_number 5; exon_id "ENSE00001543700.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000186061.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
416 chr22 HAVANA gene 17151980 17160383 . - . gene_id "ENSG00000259271.1"; transcript_id "ENSG00000259271.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ANKRD62P1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "ANKRD62P1"; level 2; havana_gene "OTTHUMG00000149993.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
417 chr22 HAVANA transcript 17151980 17160383 . - . gene_id "ENSG00000259271.1"; transcript_id "ENST00000434304.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ANKRD62P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000149993.3"; havana_transcript "OTTHUMT00000315428.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
418 chr22 HAVANA exon 17160182 17160383 . - . gene_id "ENSG00000259271.1"; transcript_id "ENST00000434304.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ANKRD62P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-001"; exon_number 1; exon_id "ENSE00003518483.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000149993.3"; havana_transcript "OTTHUMT00000315428.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
419 chr22 HAVANA exon 17158083 17158266 . - . gene_id "ENSG00000259271.1"; transcript_id "ENST00000434304.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ANKRD62P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-001"; exon_number 2; exon_id "ENSE00003521508.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000149993.3"; havana_transcript "OTTHUMT00000315428.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
420 chr22 HAVANA exon 17156013 17156936 . - . gene_id "ENSG00000259271.1"; transcript_id "ENST00000434304.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ANKRD62P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-001"; exon_number 3; exon_id "ENSE00001593736.2"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000149993.3"; havana_transcript "OTTHUMT00000315428.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
421 chr22 HAVANA exon 17154490 17154642 . - . gene_id "ENSG00000259271.1"; transcript_id "ENST00000434304.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ANKRD62P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-001"; exon_number 4; exon_id "ENSE00003633457.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000149993.3"; havana_transcript "OTTHUMT00000315428.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
422 chr22 HAVANA exon 17152408 17152478 . - . gene_id "ENSG00000259271.1"; transcript_id "ENST00000434304.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ANKRD62P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-001"; exon_number 5; exon_id "ENSE00003503074.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000149993.3"; havana_transcript "OTTHUMT00000315428.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
423 chr22 HAVANA exon 17151980 17152068 . - . gene_id "ENSG00000259271.1"; transcript_id "ENST00000434304.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ANKRD62P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ANKRD62P1-001"; exon_number 6; exon_id "ENSE00001745875.2"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000149993.3"; havana_transcript "OTTHUMT00000315428.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
424 chr22 HAVANA gene 17156906 17175538 . - . gene_id "ENSG00000273244.1"; transcript_id "ENSG00000273244.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-7G2.8"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "KB-7G2.8"; level 2; havana_gene "OTTHUMG00000172533.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
425 chr22 HAVANA transcript 17156906 17175538 . - . gene_id "ENSG00000273244.1"; transcript_id "ENST00000423580.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-7G2.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-7G2.8-001"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000172533.1"; havana_transcript "OTTHUMT00000418976.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
426 chr22 HAVANA exon 17175468 17175538 . - . gene_id "ENSG00000273244.1"; transcript_id "ENST00000423580.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-7G2.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-7G2.8-001"; exon_number 1; exon_id "ENSE00002568320.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000172533.1"; havana_transcript "OTTHUMT00000418976.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
427 chr22 HAVANA exon 17172865 17173029 . - . gene_id "ENSG00000273244.1"; transcript_id "ENST00000423580.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-7G2.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-7G2.8-001"; exon_number 2; exon_id "ENSE00003500841.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000172533.1"; havana_transcript "OTTHUMT00000418976.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
428 chr22 HAVANA exon 17171463 17171506 . - . gene_id "ENSG00000273244.1"; transcript_id "ENST00000423580.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-7G2.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-7G2.8-001"; exon_number 3; exon_id "ENSE00003611377.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000172533.1"; havana_transcript "OTTHUMT00000418976.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
429 chr22 HAVANA exon 17170993 17171170 . - . gene_id "ENSG00000273244.1"; transcript_id "ENST00000423580.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-7G2.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-7G2.8-001"; exon_number 4; exon_id "ENSE00003637368.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000172533.1"; havana_transcript "OTTHUMT00000418976.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
430 chr22 HAVANA exon 17160182 17160383 . - . gene_id "ENSG00000273244.1"; transcript_id "ENST00000423580.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-7G2.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-7G2.8-001"; exon_number 5; exon_id "ENSE00003579924.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000172533.1"; havana_transcript "OTTHUMT00000418976.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
431 chr22 HAVANA exon 17158083 17158266 . - . gene_id "ENSG00000273244.1"; transcript_id "ENST00000423580.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-7G2.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-7G2.8-001"; exon_number 6; exon_id "ENSE00003686527.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000172533.1"; havana_transcript "OTTHUMT00000418976.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
432 chr22 HAVANA exon 17156906 17156936 . - . gene_id "ENSG00000273244.1"; transcript_id "ENST00000423580.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-7G2.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-7G2.8-001"; exon_number 7; exon_id "ENSE00001790939.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000172533.1"; havana_transcript "OTTHUMT00000418976.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
433 chr22 HAVANA gene 17170993 17185367 . - . gene_id "ENSG00000241717.1"; transcript_id "ENSG00000241717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VWFP1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "VWFP1"; level 2; havana_gene "OTTHUMG00000143725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
434 chr22 HAVANA transcript 17170993 17185367 . - . gene_id "ENSG00000241717.1"; transcript_id "ENST00000457911.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VWFP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "VWFP1-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143725.1"; havana_transcript "OTTHUMT00000289788.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
435 chr22 HAVANA exon 17185199 17185367 . - . gene_id "ENSG00000241717.1"; transcript_id "ENST00000457911.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VWFP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "VWFP1-001"; exon_number 1; exon_id "ENSE00001638969.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143725.1"; havana_transcript "OTTHUMT00000289788.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
436 chr22 HAVANA exon 17184883 17184996 . - . gene_id "ENSG00000241717.1"; transcript_id "ENST00000457911.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VWFP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "VWFP1-001"; exon_number 2; exon_id "ENSE00001775995.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143725.1"; havana_transcript "OTTHUMT00000289788.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
437 chr22 HAVANA exon 17182933 17183093 . - . gene_id "ENSG00000241717.1"; transcript_id "ENST00000457911.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VWFP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "VWFP1-001"; exon_number 3; exon_id "ENSE00001718001.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143725.1"; havana_transcript "OTTHUMT00000289788.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
438 chr22 HAVANA exon 17182044 17182202 . - . gene_id "ENSG00000241717.1"; transcript_id "ENST00000457911.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VWFP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "VWFP1-001"; exon_number 4; exon_id "ENSE00001688511.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143725.1"; havana_transcript "OTTHUMT00000289788.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
439 chr22 HAVANA exon 17181204 17181339 . - . gene_id "ENSG00000241717.1"; transcript_id "ENST00000457911.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VWFP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "VWFP1-001"; exon_number 5; exon_id "ENSE00001617518.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143725.1"; havana_transcript "OTTHUMT00000289788.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
440 chr22 HAVANA exon 17177668 17179046 . - . gene_id "ENSG00000241717.1"; transcript_id "ENST00000457911.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VWFP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "VWFP1-001"; exon_number 6; exon_id "ENSE00001687710.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143725.1"; havana_transcript "OTTHUMT00000289788.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
441 chr22 HAVANA exon 17176132 17176248 . - . gene_id "ENSG00000241717.1"; transcript_id "ENST00000457911.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VWFP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "VWFP1-001"; exon_number 7; exon_id "ENSE00001745760.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143725.1"; havana_transcript "OTTHUMT00000289788.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
442 chr22 HAVANA exon 17175894 17176034 . - . gene_id "ENSG00000241717.1"; transcript_id "ENST00000457911.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VWFP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "VWFP1-001"; exon_number 8; exon_id "ENSE00001638598.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143725.1"; havana_transcript "OTTHUMT00000289788.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
443 chr22 HAVANA exon 17175468 17175611 . - . gene_id "ENSG00000241717.1"; transcript_id "ENST00000457911.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VWFP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "VWFP1-001"; exon_number 9; exon_id "ENSE00001596500.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143725.1"; havana_transcript "OTTHUMT00000289788.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
444 chr22 HAVANA exon 17172865 17173029 . - . gene_id "ENSG00000241717.1"; transcript_id "ENST00000457911.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VWFP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "VWFP1-001"; exon_number 10; exon_id "ENSE00003475019.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143725.1"; havana_transcript "OTTHUMT00000289788.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
445 chr22 HAVANA exon 17171463 17171506 . - . gene_id "ENSG00000241717.1"; transcript_id "ENST00000457911.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VWFP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "VWFP1-001"; exon_number 11; exon_id "ENSE00003484966.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143725.1"; havana_transcript "OTTHUMT00000289788.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
446 chr22 HAVANA exon 17170993 17171170 . - . gene_id "ENSG00000241717.1"; transcript_id "ENST00000457911.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VWFP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "VWFP1-001"; exon_number 12; exon_id "ENSE00003520301.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143725.1"; havana_transcript "OTTHUMT00000289788.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
447 chr22 HAVANA gene 17227759 17229535 . - . gene_id "ENSG00000235343.1"; transcript_id "ENSG00000235343.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC005301.8"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AC005301.8"; level 2; havana_gene "OTTHUMG00000153504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
448 chr22 HAVANA transcript 17227759 17229535 . - . gene_id "ENSG00000235343.1"; transcript_id "ENST00000422917.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC005301.8"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC005301.8-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000153504.1"; havana_transcript "OTTHUMT00000331389.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
449 chr22 HAVANA exon 17229166 17229535 . - . gene_id "ENSG00000235343.1"; transcript_id "ENST00000422917.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC005301.8"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC005301.8-001"; exon_number 1; exon_id "ENSE00001764059.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000153504.1"; havana_transcript "OTTHUMT00000331389.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
450 chr22 HAVANA exon 17227759 17228629 . - . gene_id "ENSG00000235343.1"; transcript_id "ENST00000422917.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC005301.8"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC005301.8-001"; exon_number 2; exon_id "ENSE00001677923.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000153504.1"; havana_transcript "OTTHUMT00000331389.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
451 chr22 HAVANA gene 17264302 17302589 . - . gene_id "ENSG00000172967.7"; transcript_id "ENSG00000172967.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "XKR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "XKR3"; level 2; havana_gene "OTTHUMG00000143726.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
452 chr22 HAVANA transcript 17264302 17302589 . - . gene_id "ENSG00000172967.7"; transcript_id "ENST00000331428.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "XKR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "XKR3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42975.1"; havana_gene "OTTHUMG00000143726.1"; havana_transcript "OTTHUMT00000289789.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
453 chr22 HAVANA exon 17302497 17302589 . - . gene_id "ENSG00000172967.7"; transcript_id "ENST00000331428.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "XKR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "XKR3-001"; exon_number 1; exon_id "ENSE00001250637.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42975.1"; havana_gene "OTTHUMG00000143726.1"; havana_transcript "OTTHUMT00000289789.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
454 chr22 HAVANA exon 17288629 17288973 . - . gene_id "ENSG00000172967.7"; transcript_id "ENST00000331428.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "XKR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "XKR3-001"; exon_number 2; exon_id "ENSE00001303813.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42975.1"; havana_gene "OTTHUMG00000143726.1"; havana_transcript "OTTHUMT00000289789.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
455 chr22 HAVANA CDS 17288629 17288963 . - 0 gene_id "ENSG00000172967.7"; transcript_id "ENST00000331428.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "XKR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "XKR3-001"; exon_number 2; exon_id "ENSE00001303813.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42975.1"; havana_gene "OTTHUMG00000143726.1"; havana_transcript "OTTHUMT00000289789.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
456 chr22 HAVANA start_codon 17288961 17288963 . - 0 gene_id "ENSG00000172967.7"; transcript_id "ENST00000331428.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "XKR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "XKR3-001"; exon_number 2; exon_id "ENSE00001303813.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42975.1"; havana_gene "OTTHUMG00000143726.1"; havana_transcript "OTTHUMT00000289789.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
457 chr22 HAVANA exon 17280661 17280914 . - . gene_id "ENSG00000172967.7"; transcript_id "ENST00000331428.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "XKR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "XKR3-001"; exon_number 3; exon_id "ENSE00001196508.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42975.1"; havana_gene "OTTHUMG00000143726.1"; havana_transcript "OTTHUMT00000289789.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
458 chr22 HAVANA CDS 17280661 17280914 . - 1 gene_id "ENSG00000172967.7"; transcript_id "ENST00000331428.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "XKR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "XKR3-001"; exon_number 3; exon_id "ENSE00001196508.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42975.1"; havana_gene "OTTHUMG00000143726.1"; havana_transcript "OTTHUMT00000289789.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
459 chr22 HAVANA exon 17264302 17265299 . - . gene_id "ENSG00000172967.7"; transcript_id "ENST00000331428.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "XKR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "XKR3-001"; exon_number 4; exon_id "ENSE00001305313.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42975.1"; havana_gene "OTTHUMG00000143726.1"; havana_transcript "OTTHUMT00000289789.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
460 chr22 HAVANA CDS 17264512 17265299 . - 2 gene_id "ENSG00000172967.7"; transcript_id "ENST00000331428.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "XKR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "XKR3-001"; exon_number 4; exon_id "ENSE00001305313.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42975.1"; havana_gene "OTTHUMG00000143726.1"; havana_transcript "OTTHUMT00000289789.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
461 chr22 HAVANA stop_codon 17264509 17264511 . - 0 gene_id "ENSG00000172967.7"; transcript_id "ENST00000331428.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "XKR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "XKR3-001"; exon_number 4; exon_id "ENSE00001305313.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42975.1"; havana_gene "OTTHUMG00000143726.1"; havana_transcript "OTTHUMT00000289789.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
462 chr22 HAVANA UTR 17302497 17302589 . - . gene_id "ENSG00000172967.7"; transcript_id "ENST00000331428.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "XKR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "XKR3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42975.1"; havana_gene "OTTHUMG00000143726.1"; havana_transcript "OTTHUMT00000289789.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
463 chr22 HAVANA UTR 17288964 17288973 . - . gene_id "ENSG00000172967.7"; transcript_id "ENST00000331428.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "XKR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "XKR3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42975.1"; havana_gene "OTTHUMG00000143726.1"; havana_transcript "OTTHUMT00000289789.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
464 chr22 HAVANA UTR 17264302 17264511 . - . gene_id "ENSG00000172967.7"; transcript_id "ENST00000331428.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "XKR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "XKR3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42975.1"; havana_gene "OTTHUMG00000143726.1"; havana_transcript "OTTHUMT00000289789.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
465 chr22 HAVANA gene 17308364 17310225 . + . gene_id "ENSG00000229027.3"; transcript_id "ENSG00000229027.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "HSFY1P1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "HSFY1P1"; level 2; havana_gene "OTTHUMG00000143727.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
466 chr22 HAVANA transcript 17308364 17310225 . + . gene_id "ENSG00000229027.3"; transcript_id "ENST00000425038.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "HSFY1P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "HSFY1P1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000143727.3"; havana_transcript "OTTHUMT00000289790.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
467 chr22 HAVANA exon 17308364 17308950 . + . gene_id "ENSG00000229027.3"; transcript_id "ENST00000425038.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "HSFY1P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "HSFY1P1-002"; exon_number 1; exon_id "ENSE00001769854.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000143727.3"; havana_transcript "OTTHUMT00000289790.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
468 chr22 HAVANA exon 17309432 17310225 . + . gene_id "ENSG00000229027.3"; transcript_id "ENST00000425038.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "HSFY1P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "HSFY1P1-002"; exon_number 2; exon_id "ENSE00001605777.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000143727.3"; havana_transcript "OTTHUMT00000289790.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
469 chr22 HAVANA transcript 17308441 17310099 . + . gene_id "ENSG00000229027.3"; transcript_id "ENST00000423928.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "HSFY1P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "HSFY1P1-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143727.3"; havana_transcript "OTTHUMT00000316230.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
470 chr22 HAVANA exon 17308441 17308950 . + . gene_id "ENSG00000229027.3"; transcript_id "ENST00000423928.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "HSFY1P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "HSFY1P1-001"; exon_number 1; exon_id "ENSE00001761269.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143727.3"; havana_transcript "OTTHUMT00000316230.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
471 chr22 HAVANA exon 17309432 17310099 . + . gene_id "ENSG00000229027.3"; transcript_id "ENST00000423928.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "HSFY1P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "HSFY1P1-001"; exon_number 2; exon_id "ENSE00001615012.2"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000143727.3"; havana_transcript "OTTHUMT00000316230.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
472 chr22 HAVANA gene 17318412 17318556 . + . gene_id "ENSG00000234121.1"; transcript_id "ENSG00000234121.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GPM6BP3"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "GPM6BP3"; level 2; havana_gene "OTTHUMG00000144175.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
473 chr22 HAVANA transcript 17318412 17318556 . + . gene_id "ENSG00000234121.1"; transcript_id "ENST00000442797.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GPM6BP3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "GPM6BP3-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000144175.2"; havana_transcript "OTTHUMT00000291379.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
474 chr22 HAVANA exon 17318412 17318556 . + . gene_id "ENSG00000234121.1"; transcript_id "ENST00000442797.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GPM6BP3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "GPM6BP3-001"; exon_number 1; exon_id "ENSE00001776270.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000144175.2"; havana_transcript "OTTHUMT00000291379.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
475 chr22 HAVANA gene 17336694 17337052 . + . gene_id "ENSG00000237835.1"; transcript_id "ENSG00000237835.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007064.22"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC007064.22"; level 2; havana_gene "OTTHUMG00000144176.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
476 chr22 HAVANA transcript 17336694 17337052 . + . gene_id "ENSG00000237835.1"; transcript_id "ENST00000422608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007064.22"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC007064.22-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000144176.1"; havana_transcript "OTTHUMT00000291381.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
477 chr22 HAVANA exon 17336694 17337052 . + . gene_id "ENSG00000237835.1"; transcript_id "ENST00000422608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007064.22"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC007064.22-001"; exon_number 1; exon_id "ENSE00001782554.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000144176.1"; havana_transcript "OTTHUMT00000291381.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
478 chr22 HAVANA gene 17338509 17341608 . - . gene_id "ENSG00000220248.1"; transcript_id "ENSG00000220248.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZNF402P"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "ZNF402P"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000147350.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
479 chr22 HAVANA transcript 17338509 17341608 . - . gene_id "ENSG00000220248.1"; transcript_id "ENST00000404435.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZNF402P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ZNF402P-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000147350.1"; havana_transcript "OTTHUMT00000303968.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
480 chr22 HAVANA exon 17338509 17341608 . - . gene_id "ENSG00000220248.1"; transcript_id "ENST00000404435.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZNF402P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ZNF402P-001"; exon_number 1; exon_id "ENSE00001563441.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000147350.1"; havana_transcript "OTTHUMT00000303968.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
481 chr22 HAVANA gene 17350368 17352016 . + . gene_id "ENSG00000237689.1"; transcript_id "ENSG00000237689.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC007064.24"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AC007064.24"; level 1; havana_gene "OTTHUMG00000147348.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
482 chr22 HAVANA transcript 17350368 17352016 . + . gene_id "ENSG00000237689.1"; transcript_id "ENST00000442403.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC007064.24"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC007064.24-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000147348.1"; havana_transcript "OTTHUMT00000303966.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
483 chr22 HAVANA exon 17350368 17350516 . + . gene_id "ENSG00000237689.1"; transcript_id "ENST00000442403.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC007064.24"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC007064.24-001"; exon_number 1; exon_id "ENSE00001639792.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000147348.1"; havana_transcript "OTTHUMT00000303966.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
484 chr22 HAVANA exon 17351666 17352016 . + . gene_id "ENSG00000237689.1"; transcript_id "ENST00000442403.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC007064.24"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC007064.24-001"; exon_number 2; exon_id "ENSE00001730911.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000147348.1"; havana_transcript "OTTHUMT00000303966.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
485 chr22 HAVANA gene 17357108 17357311 . - . gene_id "ENSG00000228122.1"; transcript_id "ENSG00000228122.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MTND1P17"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "MTND1P17"; level 2; havana_gene "OTTHUMG00000147347.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
486 chr22 HAVANA transcript 17357108 17357311 . - . gene_id "ENSG00000228122.1"; transcript_id "ENST00000448961.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MTND1P17"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "MTND1P17-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000147347.1"; havana_transcript "OTTHUMT00000303965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
487 chr22 HAVANA exon 17357108 17357311 . - . gene_id "ENSG00000228122.1"; transcript_id "ENST00000448961.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MTND1P17"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "MTND1P17-001"; exon_number 1; exon_id "ENSE00001782881.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000147347.1"; havana_transcript "OTTHUMT00000303965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
488 chr22 HAVANA gene 17357442 17357792 . - . gene_id "ENSG00000237358.1"; transcript_id "ENSG00000237358.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007064.25"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC007064.25"; level 2; havana_gene "OTTHUMG00000147345.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
489 chr22 HAVANA transcript 17357442 17357792 . - . gene_id "ENSG00000237358.1"; transcript_id "ENST00000412238.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007064.25"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC007064.25-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000147345.1"; havana_transcript "OTTHUMT00000303963.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
490 chr22 HAVANA exon 17357442 17357792 . - . gene_id "ENSG00000237358.1"; transcript_id "ENST00000412238.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007064.25"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC007064.25-001"; exon_number 1; exon_id "ENSE00001761918.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000147345.1"; havana_transcript "OTTHUMT00000303963.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
491 chr22 HAVANA gene 17378335 17378436 . + . gene_id "ENSG00000225480.1"; transcript_id "ENSG00000225480.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC006548.19"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC006548.19"; level 2; havana_gene "OTTHUMG00000147346.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
492 chr22 HAVANA transcript 17378335 17378436 . + . gene_id "ENSG00000225480.1"; transcript_id "ENST00000427470.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC006548.19"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC006548.19-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000147346.1"; havana_transcript "OTTHUMT00000303964.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
493 chr22 HAVANA exon 17378335 17378436 . + . gene_id "ENSG00000225480.1"; transcript_id "ENST00000427470.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC006548.19"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC006548.19-001"; exon_number 1; exon_id "ENSE00001595108.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000147346.1"; havana_transcript "OTTHUMT00000303964.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
494 chr22 HAVANA gene 17385109 17385586 . - . gene_id "ENSG00000230481.2"; transcript_id "ENSG00000230481.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV1OR22-5"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV1OR22-5"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000147349.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
495 chr22 HAVANA transcript 17385109 17385586 . - . gene_id "ENSG00000230481.2"; transcript_id "ENST00000458718.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV1OR22-5"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV1OR22-5-001"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000147349.2"; havana_transcript "OTTHUMT00000303967.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
496 chr22 HAVANA exon 17385531 17385586 . - . gene_id "ENSG00000230481.2"; transcript_id "ENST00000458718.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV1OR22-5"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV1OR22-5-001"; exon_number 1; exon_id "ENSE00003688196.1"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000147349.2"; havana_transcript "OTTHUMT00000303967.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
497 chr22 HAVANA exon 17385109 17385406 . - . gene_id "ENSG00000230481.2"; transcript_id "ENST00000458718.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV1OR22-5"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV1OR22-5-001"; exon_number 2; exon_id "ENSE00001700882.2"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000147349.2"; havana_transcript "OTTHUMT00000303967.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
498 chr22 HAVANA gene 17395125 17395871 . - . gene_id "ENSG00000253691.2"; transcript_id "ENSG00000253691.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV2OR22-4"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV2OR22-4"; level 2; havana_gene "OTTHUMG00000149991.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
499 chr22 HAVANA transcript 17395125 17395871 . - . gene_id "ENSG00000253691.2"; transcript_id "ENST00000523309.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV2OR22-4"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV2OR22-4-001"; level 2; havana_gene "OTTHUMG00000149991.2"; havana_transcript "OTTHUMT00000315425.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
500 chr22 HAVANA exon 17395821 17395871 . - . gene_id "ENSG00000253691.2"; transcript_id "ENST00000523309.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV2OR22-4"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV2OR22-4-001"; exon_number 1; exon_id "ENSE00002133944.1"; level 2; havana_gene "OTTHUMG00000149991.2"; havana_transcript "OTTHUMT00000315425.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
501 chr22 HAVANA exon 17395125 17395440 . - . gene_id "ENSG00000253691.2"; transcript_id "ENST00000523309.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV2OR22-4"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV2OR22-4-001"; exon_number 2; exon_id "ENSE00002124510.2"; level 2; havana_gene "OTTHUMG00000149991.2"; havana_transcript "OTTHUMT00000315425.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
502 chr22 HAVANA gene 17402333 17403063 . - . gene_id "ENSG00000253460.2"; transcript_id "ENSG00000253460.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV2OR22-3"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV2OR22-3"; level 2; havana_gene "OTTHUMG00000149994.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
503 chr22 HAVANA transcript 17402333 17403063 . - . gene_id "ENSG00000253460.2"; transcript_id "ENST00000521969.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV2OR22-3"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV2OR22-3-001"; level 2; havana_gene "OTTHUMG00000149994.2"; havana_transcript "OTTHUMT00000315429.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
504 chr22 HAVANA exon 17403015 17403063 . - . gene_id "ENSG00000253460.2"; transcript_id "ENST00000521969.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV2OR22-3"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV2OR22-3-001"; exon_number 1; exon_id "ENSE00002140028.1"; level 2; havana_gene "OTTHUMG00000149994.2"; havana_transcript "OTTHUMT00000315429.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
505 chr22 HAVANA exon 17402333 17402643 . - . gene_id "ENSG00000253460.2"; transcript_id "ENST00000521969.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV2OR22-3"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV2OR22-3-001"; exon_number 2; exon_id "ENSE00002130948.2"; level 2; havana_gene "OTTHUMG00000149994.2"; havana_transcript "OTTHUMT00000315429.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
506 chr22 HAVANA gene 17406842 17407334 . - . gene_id "ENSG00000254264.2"; transcript_id "ENSG00000254264.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV3OR22-2"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV3OR22-2"; level 2; havana_gene "OTTHUMG00000149995.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
507 chr22 HAVANA transcript 17406842 17407334 . - . gene_id "ENSG00000254264.2"; transcript_id "ENST00000517943.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV3OR22-2"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV3OR22-2-001"; level 2; havana_gene "OTTHUMG00000149995.2"; havana_transcript "OTTHUMT00000315430.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
508 chr22 HAVANA exon 17407268 17407334 . - . gene_id "ENSG00000254264.2"; transcript_id "ENST00000517943.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV3OR22-2"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV3OR22-2-001"; exon_number 1; exon_id "ENSE00002104092.2"; level 2; havana_gene "OTTHUMG00000149995.2"; havana_transcript "OTTHUMT00000315430.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
509 chr22 HAVANA exon 17406842 17407087 . - . gene_id "ENSG00000254264.2"; transcript_id "ENST00000517943.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV3OR22-2"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV3OR22-2-001"; exon_number 2; exon_id "ENSE00002112625.1"; level 2; havana_gene "OTTHUMG00000149995.2"; havana_transcript "OTTHUMT00000315430.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
510 chr22 HAVANA gene 17414411 17414893 . - . gene_id "ENSG00000253481.2"; transcript_id "ENSG00000253481.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV1OR22-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV1OR22-1"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000149996.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
511 chr22 HAVANA transcript 17414411 17414893 . - . gene_id "ENSG00000253481.2"; transcript_id "ENST00000521497.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV1OR22-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV1OR22-1-001"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000149996.2"; havana_transcript "OTTHUMT00000315431.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
512 chr22 HAVANA exon 17414839 17414893 . - . gene_id "ENSG00000253481.2"; transcript_id "ENST00000521497.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV1OR22-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV1OR22-1-001"; exon_number 1; exon_id "ENSE00003559999.1"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000149996.2"; havana_transcript "OTTHUMT00000315431.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
513 chr22 HAVANA exon 17414411 17414715 . - . gene_id "ENSG00000253481.2"; transcript_id "ENST00000521497.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGKV1OR22-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGKV1OR22-1-001"; exon_number 2; exon_id "ENSE00002135872.2"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000149996.2"; havana_transcript "OTTHUMT00000315431.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
514 chr22 HAVANA gene 17442826 17489112 . - . gene_id "ENSG00000215568.3"; transcript_id "ENSG00000215568.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4"; level 2; havana_gene "OTTHUMG00000149992.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
515 chr22 HAVANA transcript 17442826 17489112 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
516 chr22 HAVANA exon 17488831 17489112 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 1; exon_id "ENSE00001543684.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
517 chr22 HAVANA CDS 17488831 17489004 . - 0 gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 1; exon_id "ENSE00001543684.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
518 chr22 HAVANA start_codon 17489002 17489004 . - 0 gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 1; exon_id "ENSE00001543684.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
519 chr22 HAVANA exon 17472763 17473066 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 2; exon_id "ENSE00003670539.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
520 chr22 HAVANA CDS 17472763 17473066 . - 0 gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 2; exon_id "ENSE00003670539.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
521 chr22 HAVANA exon 17468850 17469057 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 3; exon_id "ENSE00001543677.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
522 chr22 HAVANA CDS 17468850 17469057 . - 2 gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 3; exon_id "ENSE00001543677.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
523 chr22 HAVANA exon 17450833 17451083 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 4; exon_id "ENSE00001543676.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
524 chr22 HAVANA CDS 17450833 17451083 . - 1 gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 4; exon_id "ENSE00001543676.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
525 chr22 HAVANA exon 17449188 17449273 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 5; exon_id "ENSE00003654045.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
526 chr22 HAVANA CDS 17449188 17449273 . - 2 gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 5; exon_id "ENSE00003654045.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
527 chr22 HAVANA exon 17446990 17447254 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 6; exon_id "ENSE00001543672.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
528 chr22 HAVANA CDS 17446990 17447254 . - 0 gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 6; exon_id "ENSE00001543672.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
529 chr22 HAVANA exon 17446068 17446158 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 7; exon_id "ENSE00003465094.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
530 chr22 HAVANA CDS 17446068 17446158 . - 2 gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 7; exon_id "ENSE00003465094.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
531 chr22 HAVANA exon 17445656 17445752 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 8; exon_id "ENSE00003567406.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
532 chr22 HAVANA CDS 17445656 17445752 . - 1 gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 8; exon_id "ENSE00003567406.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
533 chr22 HAVANA exon 17444615 17444719 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 9; exon_id "ENSE00003541852.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
534 chr22 HAVANA CDS 17444615 17444719 . - 0 gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 9; exon_id "ENSE00003541852.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
535 chr22 HAVANA exon 17442826 17443766 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 10; exon_id "ENSE00001543665.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
536 chr22 HAVANA CDS 17443626 17443766 . - 0 gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 10; exon_id "ENSE00001543665.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
537 chr22 HAVANA stop_codon 17443623 17443625 . - 0 gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; exon_number 10; exon_id "ENSE00001543665.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
538 chr22 HAVANA UTR 17489005 17489112 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
539 chr22 HAVANA UTR 17442826 17443625 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000400588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GAB4-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42976.1"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
540 chr22 HAVANA transcript 17443350 17488889 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
541 chr22 HAVANA exon 17488831 17488889 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; exon_number 1; exon_id "ENSE00003576917.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
542 chr22 HAVANA CDS 17488831 17488889 . - 2 gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; exon_number 1; exon_id "ENSE00003576917.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
543 chr22 HAVANA exon 17472763 17473066 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; exon_number 2; exon_id "ENSE00003670539.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
544 chr22 HAVANA CDS 17472763 17473066 . - 0 gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; exon_number 2; exon_id "ENSE00003670539.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
545 chr22 HAVANA exon 17468850 17469006 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; exon_number 3; exon_id "ENSE00001943865.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
546 chr22 HAVANA CDS 17468850 17469006 . - 2 gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; exon_number 3; exon_id "ENSE00001943865.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
547 chr22 HAVANA exon 17449188 17449273 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; exon_number 4; exon_id "ENSE00003532535.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
548 chr22 HAVANA CDS 17449222 17449273 . - 1 gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; exon_number 4; exon_id "ENSE00003532535.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
549 chr22 HAVANA stop_codon 17449219 17449221 . - 0 gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; exon_number 4; exon_id "ENSE00003532535.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
550 chr22 HAVANA exon 17446990 17448371 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; exon_number 5; exon_id "ENSE00001941007.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
551 chr22 HAVANA exon 17446068 17446158 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; exon_number 6; exon_id "ENSE00003518217.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
552 chr22 HAVANA exon 17445656 17445752 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; exon_number 7; exon_id "ENSE00003678162.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
553 chr22 HAVANA exon 17444615 17444719 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; exon_number 8; exon_id "ENSE00003513343.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
554 chr22 HAVANA exon 17443350 17443766 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; exon_number 9; exon_id "ENSE00001907180.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
555 chr22 HAVANA UTR 17449188 17449221 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
556 chr22 HAVANA UTR 17446990 17448371 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
557 chr22 HAVANA UTR 17446068 17446158 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
558 chr22 HAVANA UTR 17445656 17445752 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
559 chr22 HAVANA UTR 17444615 17444719 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
560 chr22 HAVANA UTR 17443350 17443766 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000465611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GAB4-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000315427.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
561 chr22 HAVANA transcript 17446990 17449273 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000520505.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GAB4-004"; level 2; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000377717.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
562 chr22 HAVANA exon 17449188 17449273 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000520505.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GAB4-004"; exon_number 1; exon_id "ENSE00003535787.1"; level 2; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000377717.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
563 chr22 HAVANA exon 17446990 17447073 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000520505.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GAB4-004"; exon_number 2; exon_id "ENSE00002113393.1"; level 2; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000377717.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
564 chr22 HAVANA transcript 17448191 17488889 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000523144.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GAB4-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000377718.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
565 chr22 HAVANA exon 17488831 17488889 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000523144.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GAB4-003"; exon_number 1; exon_id "ENSE00003543343.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000377718.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
566 chr22 HAVANA exon 17472763 17473066 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000523144.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GAB4-003"; exon_number 2; exon_id "ENSE00003494482.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000377718.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
567 chr22 HAVANA exon 17449188 17449273 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000523144.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GAB4-003"; exon_number 3; exon_id "ENSE00003535787.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000377718.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
568 chr22 HAVANA exon 17448191 17448335 . - . gene_id "ENSG00000215568.3"; transcript_id "ENST00000523144.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GAB4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GAB4-003"; exon_number 4; exon_id "ENSE00002126213.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149992.3"; havana_transcript "OTTHUMT00000377718.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
569 chr22 HAVANA gene 17493294 17493822 . + . gene_id "ENSG00000270226.1"; transcript_id "ENSG00000270226.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC006548.26"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC006548.26"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000184893.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
570 chr22 HAVANA transcript 17493294 17493822 . + . gene_id "ENSG00000270226.1"; transcript_id "ENST00000605217.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC006548.26"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC006548.26-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000184893.1"; havana_transcript "OTTHUMT00000469309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
571 chr22 HAVANA exon 17493294 17493822 . + . gene_id "ENSG00000270226.1"; transcript_id "ENST00000605217.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC006548.26"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC006548.26-001"; exon_number 1; exon_id "ENSE00003560300.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000184893.1"; havana_transcript "OTTHUMT00000469309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
572 chr22 HAVANA gene 17517460 17541715 . + . gene_id "ENSG00000237438.2"; transcript_id "ENSG00000237438.2"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7"; level 1; havana_gene "OTTHUMG00000150027.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
573 chr22 HAVANA transcript 17517460 17539682 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000441006.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000315626.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
574 chr22 HAVANA exon 17517460 17518234 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000441006.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-001"; exon_number 1; exon_id "ENSE00001773822.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000315626.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
575 chr22 HAVANA exon 17525763 17525890 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000441006.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-001"; exon_number 2; exon_id "ENSE00001699373.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000315626.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
576 chr22 HAVANA exon 17528214 17528316 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000441006.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-001"; exon_number 3; exon_id "ENSE00001726793.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000315626.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
577 chr22 HAVANA exon 17537963 17539682 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000441006.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-001"; exon_number 4; exon_id "ENSE00001609504.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000315626.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
578 chr22 HAVANA transcript 17518102 17537448 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000414401.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-002"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000315824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
579 chr22 HAVANA exon 17518102 17518234 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000414401.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-002"; exon_number 1; exon_id "ENSE00001775054.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000315824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
580 chr22 HAVANA exon 17525763 17525890 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000414401.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-002"; exon_number 2; exon_id "ENSE00001699373.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000315824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
581 chr22 HAVANA exon 17528214 17528316 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000414401.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-002"; exon_number 3; exon_id "ENSE00001726793.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000315824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
582 chr22 HAVANA exon 17537267 17537448 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000414401.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-002"; exon_number 4; exon_id "ENSE00001806354.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000315824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
583 chr22 HAVANA transcript 17518129 17541715 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000609932.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-004"; level 2; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000472247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
584 chr22 HAVANA exon 17518129 17518234 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000609932.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-004"; exon_number 1; exon_id "ENSE00003710418.1"; level 2; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000472247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
585 chr22 HAVANA exon 17525763 17525890 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000609932.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-004"; exon_number 2; exon_id "ENSE00001699373.1"; level 2; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000472247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
586 chr22 HAVANA exon 17528214 17528316 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000609932.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-004"; exon_number 3; exon_id "ENSE00001726793.1"; level 2; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000472247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
587 chr22 HAVANA exon 17541485 17541715 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000609932.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-004"; exon_number 4; exon_id "ENSE00003709737.1"; level 2; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000472247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
588 chr22 HAVANA transcript 17518176 17540893 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000609596.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-003"; level 2; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000472244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
589 chr22 HAVANA exon 17518176 17518234 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000609596.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-003"; exon_number 1; exon_id "ENSE00003705150.1"; level 2; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000472244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
590 chr22 HAVANA exon 17525763 17525890 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000609596.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-003"; exon_number 2; exon_id "ENSE00001699373.1"; level 2; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000472244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
591 chr22 HAVANA exon 17528214 17528320 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000609596.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-003"; exon_number 3; exon_id "ENSE00003703516.1"; level 2; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000472244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
592 chr22 HAVANA exon 17538905 17540893 . + . gene_id "ENSG00000237438.2"; transcript_id "ENST00000609596.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "CECR7"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CECR7-003"; exon_number 4; exon_id "ENSE00003704484.1"; level 2; havana_gene "OTTHUMG00000150027.4"; havana_transcript "OTTHUMT00000472244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
593 chr22 HAVANA gene 17548711 17551565 . + . gene_id "ENSG00000273203.1"; transcript_id "ENSG00000273203.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC006946.16"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AC006946.16"; level 2; havana_gene "OTTHUMG00000186095.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
594 chr22 HAVANA transcript 17548711 17551565 . + . gene_id "ENSG00000273203.1"; transcript_id "ENST00000608373.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC006946.16"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC006946.16-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186095.1"; havana_transcript "OTTHUMT00000472245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
595 chr22 HAVANA exon 17548711 17551565 . + . gene_id "ENSG00000273203.1"; transcript_id "ENST00000608373.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC006946.16"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC006946.16-001"; exon_number 1; exon_id "ENSE00003703920.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186095.1"; havana_transcript "OTTHUMT00000472245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
596 chr22 HAVANA gene 17561591 17562346 . + . gene_id "ENSG00000273442.1"; transcript_id "ENSG00000273442.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC006946.17"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AC006946.17"; level 2; havana_gene "OTTHUMG00000186096.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
597 chr22 HAVANA transcript 17561591 17562346 . + . gene_id "ENSG00000273442.1"; transcript_id "ENST00000609791.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC006946.17"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC006946.17-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186096.1"; havana_transcript "OTTHUMT00000472246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
598 chr22 HAVANA exon 17561591 17562346 . + . gene_id "ENSG00000273442.1"; transcript_id "ENST00000609791.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC006946.17"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC006946.17-001"; exon_number 1; exon_id "ENSE00003708397.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186096.1"; havana_transcript "OTTHUMT00000472246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
599 chr22 HAVANA gene 17565844 17596583 . + . gene_id "ENSG00000177663.9"; transcript_id "ENSG00000177663.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA"; level 1; havana_gene "OTTHUMG00000150026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
600 chr22 HAVANA transcript 17565844 17581359 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000477874.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "IL17RA-004"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
601 chr22 HAVANA exon 17565844 17566119 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000477874.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "IL17RA-004"; exon_number 1; exon_id "ENSE00001921243.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
602 chr22 HAVANA exon 17578687 17578833 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000477874.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "IL17RA-004"; exon_number 2; exon_id "ENSE00003469023.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
603 chr22 HAVANA exon 17579665 17579777 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000477874.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "IL17RA-004"; exon_number 3; exon_id "ENSE00003662499.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
604 chr22 HAVANA exon 17581245 17581359 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000477874.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "IL17RA-004"; exon_number 4; exon_id "ENSE00001863400.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
605 chr22 HAVANA transcript 17565849 17596583 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
606 chr22 HAVANA exon 17565849 17566119 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 1; exon_id "ENSE00001240049.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
607 chr22 HAVANA CDS 17565982 17566119 . + 0 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 1; exon_id "ENSE00001240049.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
608 chr22 HAVANA start_codon 17565982 17565984 . + 0 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 1; exon_id "ENSE00001240049.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
609 chr22 HAVANA exon 17577952 17577976 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 2; exon_id "ENSE00001239675.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
610 chr22 HAVANA CDS 17577952 17577976 . + 0 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 2; exon_id "ENSE00001239675.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
611 chr22 HAVANA exon 17578687 17578833 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 3; exon_id "ENSE00003629316.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
612 chr22 HAVANA CDS 17578687 17578833 . + 2 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 3; exon_id "ENSE00003629316.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
613 chr22 HAVANA exon 17579665 17579777 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 4; exon_id "ENSE00003520443.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
614 chr22 HAVANA CDS 17579665 17579777 . + 2 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 4; exon_id "ENSE00003520443.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
615 chr22 HAVANA exon 17581245 17581371 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 5; exon_id "ENSE00001239660.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
616 chr22 HAVANA CDS 17581245 17581371 . + 0 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 5; exon_id "ENSE00001239660.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
617 chr22 HAVANA exon 17582886 17582933 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 6; exon_id "ENSE00001239658.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
618 chr22 HAVANA CDS 17582886 17582933 . + 2 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 6; exon_id "ENSE00001239658.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
619 chr22 HAVANA exon 17583029 17583192 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 7; exon_id "ENSE00001239653.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
620 chr22 HAVANA CDS 17583029 17583192 . + 2 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 7; exon_id "ENSE00001239653.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
621 chr22 HAVANA exon 17584384 17584467 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 8; exon_id "ENSE00001239646.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
622 chr22 HAVANA CDS 17584384 17584467 . + 0 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 8; exon_id "ENSE00001239646.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
623 chr22 HAVANA exon 17585616 17585700 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 9; exon_id "ENSE00001239606.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
624 chr22 HAVANA CDS 17585616 17585700 . + 0 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 9; exon_id "ENSE00001239606.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
625 chr22 HAVANA exon 17586481 17586492 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 10; exon_id "ENSE00001656252.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
626 chr22 HAVANA CDS 17586481 17586492 . + 2 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 10; exon_id "ENSE00001656252.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
627 chr22 HAVANA exon 17586743 17586844 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 11; exon_id "ENSE00001239625.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
628 chr22 HAVANA CDS 17586743 17586844 . + 2 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 11; exon_id "ENSE00001239625.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
629 chr22 HAVANA exon 17588617 17588658 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 12; exon_id "ENSE00001239593.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
630 chr22 HAVANA CDS 17588617 17588658 . + 2 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 12; exon_id "ENSE00001239593.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
631 chr22 HAVANA exon 17589197 17596583 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 13; exon_id "ENSE00001886659.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
632 chr22 HAVANA CDS 17589197 17590707 . + 2 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 13; exon_id "ENSE00001886659.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
633 chr22 HAVANA stop_codon 17590708 17590710 . + 0 gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; exon_number 13; exon_id "ENSE00001886659.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
634 chr22 HAVANA UTR 17565849 17565981 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
635 chr22 HAVANA UTR 17590708 17596583 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
636 chr22 HAVANA transcript 17565947 17578399 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000459971.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "IL17RA-003"; level 2; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
637 chr22 HAVANA exon 17565947 17566119 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000459971.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "IL17RA-003"; exon_number 1; exon_id "ENSE00001820825.1"; level 2; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
638 chr22 HAVANA exon 17577952 17578399 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000459971.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "IL17RA-003"; exon_number 2; exon_id "ENSE00001945922.1"; level 2; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
639 chr22 HAVANA gene 17574502 17574829 . - . gene_id "ENSG00000235328.1"; transcript_id "ENSG00000235328.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC006946.12"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC006946.12"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150025.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
640 chr22 HAVANA transcript 17574502 17574829 . - . gene_id "ENSG00000235328.1"; transcript_id "ENST00000429106.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC006946.12"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC006946.12-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150025.2"; havana_transcript "OTTHUMT00000315819.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
641 chr22 HAVANA exon 17574502 17574829 . - . gene_id "ENSG00000235328.1"; transcript_id "ENST00000429106.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC006946.12"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC006946.12-001"; exon_number 1; exon_id "ENSE00001775728.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150025.2"; havana_transcript "OTTHUMT00000315819.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
642 chr22 HAVANA gene 17597189 17602257 . - . gene_id "ENSG00000183307.3"; transcript_id "ENSG00000183307.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR6"; level 1; havana_gene "OTTHUMG00000030471.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
643 chr22 HAVANA transcript 17597189 17602257 . - . gene_id "ENSG00000183307.3"; transcript_id "ENST00000399875.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR6-002"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54494.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000316077.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
644 chr22 HAVANA exon 17602142 17602257 . - . gene_id "ENSG00000183307.3"; transcript_id "ENST00000399875.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR6-002"; exon_number 1; exon_id "ENSE00001540546.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54494.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000316077.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
645 chr22 HAVANA exon 17597189 17601033 . - . gene_id "ENSG00000183307.3"; transcript_id "ENST00000399875.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR6-002"; exon_number 2; exon_id "ENSE00001540542.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54494.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000316077.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
646 chr22 HAVANA CDS 17600284 17600952 . - 0 gene_id "ENSG00000183307.3"; transcript_id "ENST00000399875.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR6-002"; exon_number 2; exon_id "ENSE00001540542.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54494.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000316077.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
647 chr22 HAVANA start_codon 17600950 17600952 . - 0 gene_id "ENSG00000183307.3"; transcript_id "ENST00000399875.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR6-002"; exon_number 2; exon_id "ENSE00001540542.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54494.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000316077.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
648 chr22 HAVANA stop_codon 17600281 17600283 . - 0 gene_id "ENSG00000183307.3"; transcript_id "ENST00000399875.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR6-002"; exon_number 2; exon_id "ENSE00001540542.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54494.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000316077.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
649 chr22 HAVANA UTR 17602142 17602257 . - . gene_id "ENSG00000183307.3"; transcript_id "ENST00000399875.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR6-002"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54494.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000316077.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
650 chr22 HAVANA UTR 17597189 17600283 . - . gene_id "ENSG00000183307.3"; transcript_id "ENST00000399875.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR6-002"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54494.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000316077.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
651 chr22 HAVANA UTR 17600953 17601033 . - . gene_id "ENSG00000183307.3"; transcript_id "ENST00000399875.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR6-002"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54494.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000316077.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
652 chr22 HAVANA transcript 17597190 17602143 . - . gene_id "ENSG00000183307.3"; transcript_id "ENST00000331437.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR6-001"; level 1; tag "basic"; tag "appris_candidate_longest"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13740.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000075359.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
653 chr22 HAVANA exon 17597190 17602143 . - . gene_id "ENSG00000183307.3"; transcript_id "ENST00000331437.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR6-001"; exon_number 1; exon_id "ENSE00001310406.4"; level 1; tag "basic"; tag "appris_candidate_longest"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13740.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000075359.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
654 chr22 HAVANA CDS 17600284 17602017 . - 0 gene_id "ENSG00000183307.3"; transcript_id "ENST00000331437.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR6-001"; exon_number 1; exon_id "ENSE00001310406.4"; level 1; tag "basic"; tag "appris_candidate_longest"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13740.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000075359.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
655 chr22 HAVANA start_codon 17602015 17602017 . - 0 gene_id "ENSG00000183307.3"; transcript_id "ENST00000331437.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR6-001"; exon_number 1; exon_id "ENSE00001310406.4"; level 1; tag "basic"; tag "appris_candidate_longest"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13740.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000075359.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
656 chr22 HAVANA stop_codon 17600281 17600283 . - 0 gene_id "ENSG00000183307.3"; transcript_id "ENST00000331437.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR6-001"; exon_number 1; exon_id "ENSE00001310406.4"; level 1; tag "basic"; tag "appris_candidate_longest"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13740.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000075359.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
657 chr22 HAVANA UTR 17597190 17600283 . - . gene_id "ENSG00000183307.3"; transcript_id "ENST00000331437.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR6-001"; level 1; tag "basic"; tag "appris_candidate_longest"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13740.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000075359.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
658 chr22 HAVANA UTR 17602018 17602143 . - . gene_id "ENSG00000183307.3"; transcript_id "ENST00000331437.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR6-001"; level 1; tag "basic"; tag "appris_candidate_longest"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13740.1"; havana_gene "OTTHUMG00000030471.5"; havana_transcript "OTTHUMT00000075359.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
659 chr22 HAVANA gene 17602476 17612994 . + . gene_id "ENSG00000235478.1"; transcript_id "ENSG00000235478.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC006946.15"; level 1; havana_gene "OTTHUMG00000153502.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
660 chr22 HAVANA transcript 17602476 17611333 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000428078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AC006946.15-002"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000347935.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
661 chr22 HAVANA exon 17602476 17602929 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000428078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AC006946.15-002"; exon_number 1; exon_id "ENSE00001608757.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000347935.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
662 chr22 HAVANA CDS 17602819 17602929 . + 0 gene_id "ENSG00000235478.1"; transcript_id "ENST00000428078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AC006946.15-002"; exon_number 1; exon_id "ENSE00001608757.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000347935.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
663 chr22 HAVANA start_codon 17602819 17602821 . + 0 gene_id "ENSG00000235478.1"; transcript_id "ENST00000428078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AC006946.15-002"; exon_number 1; exon_id "ENSE00001608757.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000347935.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
664 chr22 HAVANA exon 17603459 17603628 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000428078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AC006946.15-002"; exon_number 2; exon_id "ENSE00001741117.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000347935.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
665 chr22 HAVANA CDS 17603459 17603542 . + 0 gene_id "ENSG00000235478.1"; transcript_id "ENST00000428078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AC006946.15-002"; exon_number 2; exon_id "ENSE00001741117.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000347935.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
666 chr22 HAVANA stop_codon 17603543 17603545 . + 0 gene_id "ENSG00000235478.1"; transcript_id "ENST00000428078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AC006946.15-002"; exon_number 2; exon_id "ENSE00001741117.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000347935.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
667 chr22 HAVANA exon 17605545 17605661 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000428078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AC006946.15-002"; exon_number 3; exon_id "ENSE00003678691.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000347935.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
668 chr22 HAVANA exon 17611252 17611333 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000428078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AC006946.15-002"; exon_number 4; exon_id "ENSE00001627055.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000347935.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
669 chr22 HAVANA UTR 17602476 17602818 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000428078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AC006946.15-002"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000347935.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
670 chr22 HAVANA UTR 17603543 17603628 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000428078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AC006946.15-002"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000347935.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
671 chr22 HAVANA UTR 17605545 17605661 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000428078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AC006946.15-002"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000347935.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
672 chr22 HAVANA UTR 17611252 17611333 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000428078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AC006946.15-002"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000347935.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
673 chr22 HAVANA transcript 17602485 17612994 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000441544.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006946.15-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000331387.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
674 chr22 HAVANA exon 17602485 17602929 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000441544.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006946.15-001"; exon_number 1; exon_id "ENSE00001755493.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000331387.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
675 chr22 HAVANA CDS 17602819 17602929 . + 0 gene_id "ENSG00000235478.1"; transcript_id "ENST00000441544.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006946.15-001"; exon_number 1; exon_id "ENSE00001755493.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000331387.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
676 chr22 HAVANA start_codon 17602819 17602821 . + 0 gene_id "ENSG00000235478.1"; transcript_id "ENST00000441544.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006946.15-001"; exon_number 1; exon_id "ENSE00001755493.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000331387.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
677 chr22 HAVANA exon 17605545 17605661 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000441544.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006946.15-001"; exon_number 2; exon_id "ENSE00003477722.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000331387.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
678 chr22 HAVANA CDS 17605545 17605661 . + 0 gene_id "ENSG00000235478.1"; transcript_id "ENST00000441544.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006946.15-001"; exon_number 2; exon_id "ENSE00003477722.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000331387.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
679 chr22 HAVANA exon 17611252 17611374 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000441544.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006946.15-001"; exon_number 3; exon_id "ENSE00001757804.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000331387.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
680 chr22 HAVANA CDS 17611252 17611341 . + 0 gene_id "ENSG00000235478.1"; transcript_id "ENST00000441544.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006946.15-001"; exon_number 3; exon_id "ENSE00001757804.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000331387.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
681 chr22 HAVANA stop_codon 17611342 17611344 . + 0 gene_id "ENSG00000235478.1"; transcript_id "ENST00000441544.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006946.15-001"; exon_number 3; exon_id "ENSE00001757804.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000331387.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
682 chr22 HAVANA exon 17612505 17612994 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000441544.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006946.15-001"; exon_number 4; exon_id "ENSE00001719035.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000331387.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
683 chr22 HAVANA UTR 17602485 17602818 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000441544.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006946.15-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000331387.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
684 chr22 HAVANA UTR 17611342 17611374 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000441544.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006946.15-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000331387.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
685 chr22 HAVANA UTR 17612505 17612994 . + . gene_id "ENSG00000235478.1"; transcript_id "ENST00000441544.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006946.15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006946.15-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000153502.4"; havana_transcript "OTTHUMT00000331387.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
686 chr22 HAVANA gene 17618401 17646177 . - . gene_id "ENSG00000069998.8"; transcript_id "ENSG00000069998.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5"; level 1; havana_gene "OTTHUMG00000150071.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
687 chr22 HAVANA transcript 17618401 17646177 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
688 chr22 HAVANA exon 17646099 17646177 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 1; exon_id "ENSE00001359591.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
689 chr22 HAVANA CDS 17646099 17646134 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 1; exon_id "ENSE00001359591.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
690 chr22 HAVANA start_codon 17646132 17646134 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 1; exon_id "ENSE00001359591.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
691 chr22 HAVANA exon 17630432 17630635 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 2; exon_id "ENSE00003684102.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
692 chr22 HAVANA CDS 17630432 17630635 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 2; exon_id "ENSE00003684102.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
693 chr22 HAVANA exon 17629338 17629450 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 3; exon_id "ENSE00003590818.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
694 chr22 HAVANA CDS 17629338 17629450 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 3; exon_id "ENSE00003590818.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
695 chr22 HAVANA exon 17625914 17626007 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 4; exon_id "ENSE00000650240.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
696 chr22 HAVANA CDS 17625914 17626007 . - 1 gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 4; exon_id "ENSE00000650240.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
697 chr22 HAVANA exon 17623988 17624021 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 5; exon_id "ENSE00000650236.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
698 chr22 HAVANA CDS 17623988 17624021 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 5; exon_id "ENSE00000650236.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
699 chr22 HAVANA exon 17621949 17622123 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 6; exon_id "ENSE00003579586.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
700 chr22 HAVANA CDS 17621949 17622123 . - 2 gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 6; exon_id "ENSE00003579586.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
701 chr22 HAVANA exon 17619440 17619628 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 7; exon_id "ENSE00003611649.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
702 chr22 HAVANA CDS 17619440 17619628 . - 1 gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 7; exon_id "ENSE00003611649.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
703 chr22 HAVANA exon 17618401 17619247 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 8; exon_id "ENSE00001867638.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
704 chr22 HAVANA CDS 17618914 17619247 . - 1 gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 8; exon_id "ENSE00001867638.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
705 chr22 HAVANA stop_codon 17618911 17618913 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; exon_number 8; exon_id "ENSE00001867638.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
706 chr22 HAVANA UTR 17646135 17646177 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
707 chr22 HAVANA UTR 17618401 17618913 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000155674.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-001"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13741.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
708 chr22 HAVANA transcript 17618410 17640167 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
709 chr22 HAVANA exon 17640016 17640167 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 1; exon_id "ENSE00000879002.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
710 chr22 HAVANA CDS 17640016 17640141 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 1; exon_id "ENSE00000879002.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
711 chr22 HAVANA start_codon 17640139 17640141 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 1; exon_id "ENSE00000879002.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
712 chr22 HAVANA exon 17630432 17630635 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 2; exon_id "ENSE00003684102.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
713 chr22 HAVANA CDS 17630432 17630635 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 2; exon_id "ENSE00003684102.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
714 chr22 HAVANA exon 17629338 17629450 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 3; exon_id "ENSE00003590818.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
715 chr22 HAVANA CDS 17629338 17629450 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 3; exon_id "ENSE00003590818.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
716 chr22 HAVANA exon 17625914 17626007 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 4; exon_id "ENSE00000650240.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
717 chr22 HAVANA CDS 17625914 17626007 . - 1 gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 4; exon_id "ENSE00000650240.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
718 chr22 HAVANA exon 17623988 17624021 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 5; exon_id "ENSE00000650236.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
719 chr22 HAVANA CDS 17623988 17624021 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 5; exon_id "ENSE00000650236.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
720 chr22 HAVANA exon 17621949 17622123 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 6; exon_id "ENSE00003579586.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
721 chr22 HAVANA CDS 17621949 17622123 . - 2 gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 6; exon_id "ENSE00003579586.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
722 chr22 HAVANA exon 17619440 17619628 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 7; exon_id "ENSE00003611649.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
723 chr22 HAVANA CDS 17619440 17619628 . - 1 gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 7; exon_id "ENSE00003611649.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
724 chr22 HAVANA exon 17618410 17619247 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 8; exon_id "ENSE00001888325.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
725 chr22 HAVANA CDS 17618914 17619247 . - 1 gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 8; exon_id "ENSE00001888325.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
726 chr22 HAVANA stop_codon 17618911 17618913 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; exon_number 8; exon_id "ENSE00001888325.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
727 chr22 HAVANA UTR 17640142 17640167 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
728 chr22 HAVANA UTR 17618410 17618913 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000336737.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR5-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33595.1"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
729 chr22 HAVANA transcript 17618412 17624537 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000477157.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CECR5-004"; level 2; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
730 chr22 HAVANA exon 17621949 17624537 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000477157.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CECR5-004"; exon_number 1; exon_id "ENSE00001909530.1"; level 2; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
731 chr22 HAVANA exon 17619440 17619628 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000477157.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CECR5-004"; exon_number 2; exon_id "ENSE00003585399.1"; level 2; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
732 chr22 HAVANA exon 17618412 17619247 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000477157.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CECR5-004"; exon_number 3; exon_id "ENSE00001847895.1"; level 2; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
733 chr22 HAVANA transcript 17618469 17640145 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000399852.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR5-003"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
734 chr22 HAVANA exon 17640016 17640145 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000399852.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR5-003"; exon_number 1; exon_id "ENSE00001540426.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
735 chr22 HAVANA CDS 17640016 17640141 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000399852.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR5-003"; exon_number 1; exon_id "ENSE00001540426.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
736 chr22 HAVANA start_codon 17640139 17640141 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000399852.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR5-003"; exon_number 1; exon_id "ENSE00001540426.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
737 chr22 HAVANA exon 17623988 17624021 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000399852.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR5-003"; exon_number 2; exon_id "ENSE00000650236.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
738 chr22 HAVANA CDS 17623988 17624021 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000399852.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR5-003"; exon_number 2; exon_id "ENSE00000650236.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
739 chr22 HAVANA exon 17621949 17622123 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000399852.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR5-003"; exon_number 3; exon_id "ENSE00003579586.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
740 chr22 HAVANA CDS 17621949 17622123 . - 2 gene_id "ENSG00000069998.8"; transcript_id "ENST00000399852.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR5-003"; exon_number 3; exon_id "ENSE00003579586.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
741 chr22 HAVANA exon 17618469 17619247 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000399852.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR5-003"; exon_number 4; exon_id "ENSE00001895549.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
742 chr22 HAVANA CDS 17618914 17619247 . - 1 gene_id "ENSG00000069998.8"; transcript_id "ENST00000399852.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR5-003"; exon_number 4; exon_id "ENSE00001895549.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
743 chr22 HAVANA stop_codon 17618911 17618913 . - 0 gene_id "ENSG00000069998.8"; transcript_id "ENST00000399852.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR5-003"; exon_number 4; exon_id "ENSE00001895549.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
744 chr22 HAVANA UTR 17640142 17640145 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000399852.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR5-003"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
745 chr22 HAVANA UTR 17618469 17618913 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000399852.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR5-003"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
746 chr22 HAVANA transcript 17618472 17622733 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000486462.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CECR5-005"; level 2; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316103.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
747 chr22 HAVANA exon 17622283 17622733 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000486462.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CECR5-005"; exon_number 1; exon_id "ENSE00001949202.1"; level 2; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316103.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
748 chr22 HAVANA exon 17621949 17622123 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000486462.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CECR5-005"; exon_number 2; exon_id "ENSE00003511552.1"; level 2; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316103.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
749 chr22 HAVANA exon 17619440 17619628 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000486462.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CECR5-005"; exon_number 3; exon_id "ENSE00003585399.1"; level 2; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316103.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
750 chr22 HAVANA exon 17618472 17619247 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000486462.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CECR5-005"; exon_number 4; exon_id "ENSE00001880162.1"; level 2; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000316103.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
751 chr22 HAVANA transcript 17629338 17639876 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000463033.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CECR5-007"; level 2; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000341070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
752 chr22 HAVANA exon 17639347 17639876 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000463033.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CECR5-007"; exon_number 1; exon_id "ENSE00001912556.1"; level 2; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000341070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
753 chr22 HAVANA exon 17629338 17629450 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000463033.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CECR5-007"; exon_number 2; exon_id "ENSE00003485416.1"; level 2; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000341070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
754 chr22 HAVANA transcript 17629339 17640058 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000480451.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CECR5-006"; level 2; tag "basic"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000341069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
755 chr22 HAVANA exon 17639347 17640058 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000480451.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CECR5-006"; exon_number 1; exon_id "ENSE00001868250.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000341069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
756 chr22 HAVANA exon 17630432 17630635 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000480451.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CECR5-006"; exon_number 2; exon_id "ENSE00003531859.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000341069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
757 chr22 HAVANA exon 17629339 17629450 . - . gene_id "ENSG00000069998.8"; transcript_id "ENST00000480451.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CECR5-006"; exon_number 3; exon_id "ENSE00001830967.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150071.2"; havana_transcript "OTTHUMT00000341069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
758 chr22 HAVANA gene 17640274 17646335 . + . gene_id "ENSG00000185837.3"; transcript_id "ENSG00000185837.3"; gene_type "antisense"; gene_status "KNOWN"; gene_name "CECR5-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "CECR5-AS1"; level 1; havana_gene "OTTHUMG00000150096.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
759 chr22 HAVANA transcript 17640274 17646329 . + . gene_id "ENSG00000185837.3"; transcript_id "ENST00000329743.3"; gene_type "antisense"; gene_status "KNOWN"; gene_name "CECR5-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "CECR5-AS1-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150096.2"; havana_transcript "OTTHUMT00000316107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
760 chr22 HAVANA exon 17640274 17640441 . + . gene_id "ENSG00000185837.3"; transcript_id "ENST00000329743.3"; gene_type "antisense"; gene_status "KNOWN"; gene_name "CECR5-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "CECR5-AS1-002"; exon_number 1; exon_id "ENSE00001312950.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150096.2"; havana_transcript "OTTHUMT00000316107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
761 chr22 HAVANA exon 17646159 17646329 . + . gene_id "ENSG00000185837.3"; transcript_id "ENST00000329743.3"; gene_type "antisense"; gene_status "KNOWN"; gene_name "CECR5-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "CECR5-AS1-002"; exon_number 2; exon_id "ENSE00001739073.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150096.2"; havana_transcript "OTTHUMT00000316107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
762 chr22 HAVANA transcript 17640289 17646335 . + . gene_id "ENSG00000185837.3"; transcript_id "ENST00000431923.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "CECR5-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "CECR5-AS1-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150096.2"; havana_transcript "OTTHUMT00000316106.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
763 chr22 HAVANA exon 17640289 17640727 . + . gene_id "ENSG00000185837.3"; transcript_id "ENST00000431923.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "CECR5-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "CECR5-AS1-001"; exon_number 1; exon_id "ENSE00001290640.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150096.2"; havana_transcript "OTTHUMT00000316106.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
764 chr22 HAVANA exon 17646159 17646335 . + . gene_id "ENSG00000185837.3"; transcript_id "ENST00000431923.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "CECR5-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "CECR5-AS1-001"; exon_number 2; exon_id "ENSE00001614191.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150096.2"; havana_transcript "OTTHUMT00000316106.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
765 chr22 HAVANA gene 17660194 17702879 . - . gene_id "ENSG00000093072.11"; transcript_id "ENSG00000093072.11"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1"; level 1; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
766 chr22 HAVANA transcript 17660194 17702879 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
767 chr22 HAVANA exon 17702617 17702879 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 1; exon_id "ENSE00001540386.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
768 chr22 HAVANA exon 17690246 17690575 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 2; exon_id "ENSE00001540385.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
769 chr22 HAVANA CDS 17690246 17690567 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 2; exon_id "ENSE00001540385.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
770 chr22 HAVANA start_codon 17690565 17690567 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 2; exon_id "ENSE00001540385.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
771 chr22 HAVANA exon 17687961 17688180 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 3; exon_id "ENSE00000650281.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
772 chr22 HAVANA CDS 17687961 17688180 . - 2 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 3; exon_id "ENSE00000650281.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
773 chr22 HAVANA exon 17684453 17684663 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 4; exon_id "ENSE00000650274.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
774 chr22 HAVANA CDS 17684453 17684663 . - 1 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 4; exon_id "ENSE00000650274.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
775 chr22 HAVANA exon 17672573 17672700 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 5; exon_id "ENSE00003508775.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
776 chr22 HAVANA CDS 17672573 17672700 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 5; exon_id "ENSE00003508775.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
777 chr22 HAVANA exon 17670832 17670922 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 6; exon_id "ENSE00000650260.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
778 chr22 HAVANA CDS 17670832 17670922 . - 1 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 6; exon_id "ENSE00000650260.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
779 chr22 HAVANA exon 17669229 17669337 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 7; exon_id "ENSE00000650252.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
780 chr22 HAVANA CDS 17669229 17669337 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 7; exon_id "ENSE00000650252.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
781 chr22 HAVANA exon 17663494 17663651 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 8; exon_id "ENSE00000650250.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
782 chr22 HAVANA CDS 17663494 17663651 . - 2 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 8; exon_id "ENSE00000650250.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
783 chr22 HAVANA exon 17662710 17662912 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 9; exon_id "ENSE00000650248.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
784 chr22 HAVANA CDS 17662710 17662912 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 9; exon_id "ENSE00000650248.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
785 chr22 HAVANA exon 17660194 17662466 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 10; exon_id "ENSE00001307273.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
786 chr22 HAVANA CDS 17662376 17662466 . - 1 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 10; exon_id "ENSE00001307273.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
787 chr22 HAVANA stop_codon 17662373 17662375 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; exon_number 10; exon_id "ENSE00001307273.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
788 chr22 HAVANA UTR 17702617 17702879 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
789 chr22 HAVANA UTR 17690568 17690575 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
790 chr22 HAVANA UTR 17660194 17662375 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-002"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
791 chr22 HAVANA transcript 17660196 17680673 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
792 chr22 HAVANA exon 17680439 17680673 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 1; exon_id "ENSE00001318792.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
793 chr22 HAVANA CDS 17680439 17680468 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 1; exon_id "ENSE00001318792.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
794 chr22 HAVANA start_codon 17680466 17680468 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 1; exon_id "ENSE00001318792.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
795 chr22 HAVANA exon 17672573 17672700 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 2; exon_id "ENSE00003508775.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
796 chr22 HAVANA CDS 17672573 17672700 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 2; exon_id "ENSE00003508775.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
797 chr22 HAVANA exon 17670832 17670922 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 3; exon_id "ENSE00000650260.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
798 chr22 HAVANA CDS 17670832 17670922 . - 1 gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 3; exon_id "ENSE00000650260.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
799 chr22 HAVANA exon 17669229 17669337 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 4; exon_id "ENSE00000650252.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
800 chr22 HAVANA CDS 17669229 17669337 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 4; exon_id "ENSE00000650252.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
801 chr22 HAVANA exon 17663494 17663651 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 5; exon_id "ENSE00000650250.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
802 chr22 HAVANA CDS 17663494 17663651 . - 2 gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 5; exon_id "ENSE00000650250.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
803 chr22 HAVANA exon 17662710 17662912 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 6; exon_id "ENSE00000650248.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
804 chr22 HAVANA CDS 17662710 17662912 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 6; exon_id "ENSE00000650248.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
805 chr22 HAVANA exon 17660196 17662466 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 7; exon_id "ENSE00001298872.4"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
806 chr22 HAVANA CDS 17662376 17662466 . - 1 gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 7; exon_id "ENSE00001298872.4"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
807 chr22 HAVANA stop_codon 17662373 17662375 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; exon_number 7; exon_id "ENSE00001298872.4"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
808 chr22 HAVANA UTR 17680469 17680673 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
809 chr22 HAVANA UTR 17660196 17662375 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000330232.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13743.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
810 chr22 HAVANA transcript 17660196 17690779 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
811 chr22 HAVANA exon 17690246 17690779 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 1; exon_id "ENSE00001307122.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
812 chr22 HAVANA CDS 17690246 17690567 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 1; exon_id "ENSE00001307122.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
813 chr22 HAVANA start_codon 17690565 17690567 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 1; exon_id "ENSE00001307122.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
814 chr22 HAVANA exon 17687961 17688180 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 2; exon_id "ENSE00000650281.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
815 chr22 HAVANA CDS 17687961 17688180 . - 2 gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 2; exon_id "ENSE00000650281.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
816 chr22 HAVANA exon 17684453 17684663 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 3; exon_id "ENSE00000650274.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
817 chr22 HAVANA CDS 17684453 17684663 . - 1 gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 3; exon_id "ENSE00000650274.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
818 chr22 HAVANA exon 17672573 17672700 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 4; exon_id "ENSE00003508775.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
819 chr22 HAVANA CDS 17672573 17672700 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 4; exon_id "ENSE00003508775.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
820 chr22 HAVANA exon 17670832 17670922 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 5; exon_id "ENSE00000650260.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
821 chr22 HAVANA CDS 17670832 17670922 . - 1 gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 5; exon_id "ENSE00000650260.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
822 chr22 HAVANA exon 17669229 17669337 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 6; exon_id "ENSE00000650252.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
823 chr22 HAVANA CDS 17669229 17669337 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 6; exon_id "ENSE00000650252.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
824 chr22 HAVANA exon 17663494 17663651 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 7; exon_id "ENSE00000650250.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
825 chr22 HAVANA CDS 17663494 17663651 . - 2 gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 7; exon_id "ENSE00000650250.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
826 chr22 HAVANA exon 17662710 17662912 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 8; exon_id "ENSE00000650248.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
827 chr22 HAVANA CDS 17662710 17662912 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 8; exon_id "ENSE00000650248.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
828 chr22 HAVANA exon 17660196 17662466 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 9; exon_id "ENSE00001298872.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
829 chr22 HAVANA CDS 17662376 17662466 . - 1 gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 9; exon_id "ENSE00001298872.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
830 chr22 HAVANA stop_codon 17662373 17662375 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; exon_number 9; exon_id "ENSE00001298872.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
831 chr22 HAVANA UTR 17690568 17690779 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
832 chr22 HAVANA UTR 17660196 17662375 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000262607.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-003"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
833 chr22 ENSEMBL transcript 17661880 17702738 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
834 chr22 ENSEMBL exon 17702617 17702738 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 1; exon_id "ENSE00002256932.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
835 chr22 ENSEMBL exon 17690246 17690488 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 2; exon_id "ENSE00002274569.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
836 chr22 ENSEMBL CDS 17690246 17690441 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 2; exon_id "ENSE00002274569.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
837 chr22 ENSEMBL start_codon 17690439 17690441 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 2; exon_id "ENSE00002274569.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
838 chr22 ENSEMBL exon 17687961 17688180 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 3; exon_id "ENSE00000650281.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
839 chr22 ENSEMBL CDS 17687961 17688180 . - 2 gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 3; exon_id "ENSE00000650281.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
840 chr22 ENSEMBL exon 17684453 17684663 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 4; exon_id "ENSE00000650274.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
841 chr22 ENSEMBL CDS 17684453 17684663 . - 1 gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 4; exon_id "ENSE00000650274.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
842 chr22 ENSEMBL exon 17672573 17672700 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 5; exon_id "ENSE00003508775.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
843 chr22 ENSEMBL CDS 17672573 17672700 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 5; exon_id "ENSE00003508775.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
844 chr22 ENSEMBL exon 17670832 17670922 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 6; exon_id "ENSE00000650260.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
845 chr22 ENSEMBL CDS 17670832 17670922 . - 1 gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 6; exon_id "ENSE00000650260.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
846 chr22 ENSEMBL exon 17669229 17669337 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 7; exon_id "ENSE00000650252.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
847 chr22 ENSEMBL CDS 17669229 17669337 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 7; exon_id "ENSE00000650252.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
848 chr22 ENSEMBL exon 17663494 17663651 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 8; exon_id "ENSE00000650250.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
849 chr22 ENSEMBL CDS 17663494 17663651 . - 2 gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 8; exon_id "ENSE00000650250.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
850 chr22 ENSEMBL exon 17662710 17662912 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 9; exon_id "ENSE00000650248.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
851 chr22 ENSEMBL CDS 17662710 17662912 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 9; exon_id "ENSE00000650248.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
852 chr22 ENSEMBL exon 17661880 17662466 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 10; exon_id "ENSE00001540382.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
853 chr22 ENSEMBL CDS 17662376 17662466 . - 1 gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 10; exon_id "ENSE00001540382.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
854 chr22 ENSEMBL stop_codon 17662373 17662375 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; exon_number 10; exon_id "ENSE00001540382.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
855 chr22 ENSEMBL UTR 17702617 17702738 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
856 chr22 ENSEMBL UTR 17690442 17690488 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
857 chr22 ENSEMBL UTR 17661880 17662375 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000449907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000030726.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
858 chr22 HAVANA transcript 17662373 17700266 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
859 chr22 HAVANA exon 17700246 17700266 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 1; exon_id "ENSE00002222024.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
860 chr22 HAVANA exon 17690246 17690613 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 2; exon_id "ENSE00001714750.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
861 chr22 HAVANA CDS 17690246 17690567 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 2; exon_id "ENSE00001714750.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
862 chr22 HAVANA start_codon 17690565 17690567 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 2; exon_id "ENSE00001714750.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
863 chr22 HAVANA exon 17687961 17688180 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 3; exon_id "ENSE00000650281.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
864 chr22 HAVANA CDS 17687961 17688180 . - 2 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 3; exon_id "ENSE00000650281.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
865 chr22 HAVANA exon 17684453 17684663 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 4; exon_id "ENSE00000650274.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
866 chr22 HAVANA CDS 17684453 17684663 . - 1 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 4; exon_id "ENSE00000650274.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
867 chr22 HAVANA exon 17672573 17672700 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 5; exon_id "ENSE00003508775.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
868 chr22 HAVANA CDS 17672573 17672700 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 5; exon_id "ENSE00003508775.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
869 chr22 HAVANA exon 17670832 17670922 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 6; exon_id "ENSE00000650260.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
870 chr22 HAVANA CDS 17670832 17670922 . - 1 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 6; exon_id "ENSE00000650260.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
871 chr22 HAVANA exon 17669229 17669337 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 7; exon_id "ENSE00000650252.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
872 chr22 HAVANA CDS 17669229 17669337 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 7; exon_id "ENSE00000650252.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
873 chr22 HAVANA exon 17663494 17663651 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 8; exon_id "ENSE00000650250.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
874 chr22 HAVANA CDS 17663494 17663651 . - 2 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 8; exon_id "ENSE00000650250.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
875 chr22 HAVANA exon 17662710 17662912 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 9; exon_id "ENSE00000650248.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
876 chr22 HAVANA CDS 17662710 17662912 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 9; exon_id "ENSE00000650248.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
877 chr22 HAVANA exon 17662373 17662466 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 10; exon_id "ENSE00002313829.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
878 chr22 HAVANA CDS 17662376 17662466 . - 1 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 10; exon_id "ENSE00002313829.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
879 chr22 HAVANA stop_codon 17662373 17662375 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; exon_number 10; exon_id "ENSE00002313829.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
880 chr22 HAVANA UTR 17700246 17700266 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
881 chr22 HAVANA UTR 17690568 17690613 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
882 chr22 HAVANA UTR 17662373 17662375 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
883 chr22 HAVANA transcript 17663531 17669617 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000469063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CECR1-007"; level 2; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316084.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
884 chr22 HAVANA exon 17669229 17669617 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000469063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CECR1-007"; exon_number 1; exon_id "ENSE00001891359.1"; level 2; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316084.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
885 chr22 HAVANA exon 17663531 17663651 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000469063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CECR1-007"; exon_number 2; exon_id "ENSE00001844114.1"; level 2; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316084.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
886 chr22 HAVANA transcript 17670674 17679681 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000480276.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CECR1-006"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316083.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
887 chr22 HAVANA exon 17679489 17679681 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000480276.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CECR1-006"; exon_number 1; exon_id "ENSE00001922517.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316083.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
888 chr22 HAVANA exon 17672573 17672700 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000480276.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CECR1-006"; exon_number 2; exon_id "ENSE00003676886.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316083.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
889 chr22 HAVANA exon 17670674 17670922 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000480276.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CECR1-006"; exon_number 3; exon_id "ENSE00001895842.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316083.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
890 chr22 HAVANA transcript 17688047 17700325 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000543038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-001"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000075614.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
891 chr22 HAVANA exon 17700246 17700325 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000543038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-001"; exon_number 1; exon_id "ENSE00001540384.2"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000075614.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
892 chr22 HAVANA exon 17690246 17690580 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000543038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-001"; exon_number 2; exon_id "ENSE00001540383.2"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000075614.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
893 chr22 HAVANA CDS 17690246 17690567 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000543038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-001"; exon_number 2; exon_id "ENSE00001540383.2"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000075614.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
894 chr22 HAVANA start_codon 17690565 17690567 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000543038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-001"; exon_number 2; exon_id "ENSE00001540383.2"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000075614.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
895 chr22 HAVANA exon 17688047 17688180 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000543038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-001"; exon_number 3; exon_id "ENSE00002238209.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000075614.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
896 chr22 HAVANA CDS 17688047 17688180 . - 2 gene_id "ENSG00000093072.11"; transcript_id "ENST00000543038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-001"; exon_number 3; exon_id "ENSE00002238209.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000075614.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
897 chr22 HAVANA UTR 17700246 17700325 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000543038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-001"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000075614.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
898 chr22 HAVANA UTR 17690568 17690580 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000543038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-001"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000075614.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
899 chr22 HAVANA transcript 17688096 17702744 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000441548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR1-005"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316082.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
900 chr22 HAVANA exon 17702617 17702744 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000441548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR1-005"; exon_number 1; exon_id "ENSE00001665410.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316082.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
901 chr22 HAVANA exon 17690246 17690613 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000441548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR1-005"; exon_number 2; exon_id "ENSE00001714750.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316082.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
902 chr22 HAVANA CDS 17690246 17690567 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000441548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR1-005"; exon_number 2; exon_id "ENSE00001714750.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316082.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
903 chr22 HAVANA start_codon 17690565 17690567 . - 0 gene_id "ENSG00000093072.11"; transcript_id "ENST00000441548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR1-005"; exon_number 2; exon_id "ENSE00001714750.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316082.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
904 chr22 HAVANA exon 17688096 17688180 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000441548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR1-005"; exon_number 3; exon_id "ENSE00001629172.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316082.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
905 chr22 HAVANA CDS 17688096 17688180 . - 2 gene_id "ENSG00000093072.11"; transcript_id "ENST00000441548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR1-005"; exon_number 3; exon_id "ENSE00001629172.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316082.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
906 chr22 HAVANA UTR 17702617 17702744 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000441548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR1-005"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316082.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
907 chr22 HAVANA UTR 17690568 17690613 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000441548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CECR1-005"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316082.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
908 chr22 HAVANA gene 17673826 17674198 . + . gene_id "ENSG00000236325.1"; transcript_id "ENSG00000236325.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC005300.5"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC005300.5"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150066.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
909 chr22 HAVANA transcript 17673826 17674198 . + . gene_id "ENSG00000236325.1"; transcript_id "ENST00000428401.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC005300.5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC005300.5-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150066.1"; havana_transcript "OTTHUMT00000316086.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
910 chr22 HAVANA exon 17673826 17674198 . + . gene_id "ENSG00000236325.1"; transcript_id "ENST00000428401.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC005300.5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC005300.5-001"; exon_number 1; exon_id "ENSE00001606948.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150066.1"; havana_transcript "OTTHUMT00000316086.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
911 chr22 ENSEMBL gene 17690773 17691374 . + . gene_id "ENSG00000269774.1"; transcript_id "ENSG00000269774.1"; gene_type "pseudogene"; gene_status "NOVEL"; gene_name "AC005399.1"; transcript_type "pseudogene"; transcript_status "NOVEL"; transcript_name "AC005399.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
912 chr22 ENSEMBL transcript 17690773 17691374 . + . gene_id "ENSG00000269774.1"; transcript_id "ENST00000600045.1"; gene_type "pseudogene"; gene_status "NOVEL"; gene_name "AC005399.1"; transcript_type "pseudogene"; transcript_status "NOVEL"; transcript_name "AC005399.1-201"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
913 chr22 ENSEMBL exon 17690773 17690817 . + . gene_id "ENSG00000269774.1"; transcript_id "ENST00000600045.1"; gene_type "pseudogene"; gene_status "NOVEL"; gene_name "AC005399.1"; transcript_type "pseudogene"; transcript_status "NOVEL"; transcript_name "AC005399.1-201"; exon_number 1; exon_id "ENSE00003149571.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
914 chr22 ENSEMBL exon 17690820 17690857 . + . gene_id "ENSG00000269774.1"; transcript_id "ENST00000600045.1"; gene_type "pseudogene"; gene_status "NOVEL"; gene_name "AC005399.1"; transcript_type "pseudogene"; transcript_status "NOVEL"; transcript_name "AC005399.1-201"; exon_number 2; exon_id "ENSE00002977043.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
915 chr22 ENSEMBL exon 17691158 17691374 . + . gene_id "ENSG00000269774.1"; transcript_id "ENST00000600045.1"; gene_type "pseudogene"; gene_status "NOVEL"; gene_name "AC005399.1"; transcript_type "pseudogene"; transcript_status "NOVEL"; transcript_name "AC005399.1-201"; exon_number 3; exon_id "ENSE00003197150.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
916 chr22 HAVANA gene 17694618 17695045 . + . gene_id "ENSG00000203416.2"; transcript_id "ENSG00000203416.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "FAM32B"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "FAM32B"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150068.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
917 chr22 HAVANA transcript 17694618 17695045 . + . gene_id "ENSG00000203416.2"; transcript_id "ENST00000344033.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "FAM32B"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "FAM32B-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150068.1"; havana_transcript "OTTHUMT00000316096.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
918 chr22 HAVANA exon 17694618 17695045 . + . gene_id "ENSG00000203416.2"; transcript_id "ENST00000344033.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "FAM32B"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "FAM32B-001"; exon_number 1; exon_id "ENSE00001413546.3"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150068.1"; havana_transcript "OTTHUMT00000316096.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
919 chr22 HAVANA gene 17737749 17747623 . - . gene_id "ENSG00000241832.1"; transcript_id "ENSG00000241832.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "CECR3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CECR3"; level 2; havana_gene "OTTHUMG00000150063.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
920 chr22 HAVANA transcript 17737749 17747623 . - . gene_id "ENSG00000241832.1"; transcript_id "ENST00000428828.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "CECR3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CECR3-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150063.1"; havana_transcript "OTTHUMT00000316076.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
921 chr22 HAVANA exon 17747413 17747623 . - . gene_id "ENSG00000241832.1"; transcript_id "ENST00000428828.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "CECR3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CECR3-001"; exon_number 1; exon_id "ENSE00001784478.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150063.1"; havana_transcript "OTTHUMT00000316076.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
922 chr22 HAVANA exon 17741680 17741935 . - . gene_id "ENSG00000241832.1"; transcript_id "ENST00000428828.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "CECR3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CECR3-001"; exon_number 2; exon_id "ENSE00001700428.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150063.1"; havana_transcript "OTTHUMT00000316076.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
923 chr22 HAVANA exon 17737749 17739196 . - . gene_id "ENSG00000241832.1"; transcript_id "ENST00000428828.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "CECR3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CECR3-001"; exon_number 3; exon_id "ENSE00001744810.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150063.1"; havana_transcript "OTTHUMT00000316076.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
924 chr22 HAVANA gene 17809924 17810122 . + . gene_id "ENSG00000231004.2"; transcript_id "ENSG00000231004.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "CECR9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CECR9"; level 1; havana_gene "OTTHUMG00000150065.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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925 chr22 HAVANA transcript 17809924 17810122 . + . gene_id "ENSG00000231004.2"; transcript_id "ENST00000453421.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "CECR9"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CECR9-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150065.1"; havana_transcript "OTTHUMT00000316085.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
926 chr22 HAVANA exon 17809924 17810122 . + . gene_id "ENSG00000231004.2"; transcript_id "ENST00000453421.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "CECR9"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CECR9-001"; exon_number 1; exon_id "ENSE00001592910.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150065.1"; havana_transcript "OTTHUMT00000316085.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
927 chr22 ENSEMBL gene 17833773 17834067 . - . gene_id "ENSG00000239547.2"; transcript_id "ENSG00000239547.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL843P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL843P"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
928 chr22 ENSEMBL transcript 17833773 17834067 . - . gene_id "ENSG00000239547.2"; transcript_id "ENST00000485262.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL843P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL843P-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
929 chr22 ENSEMBL exon 17833773 17834067 . - . gene_id "ENSG00000239547.2"; transcript_id "ENST00000485262.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL843P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL843P-201"; exon_number 1; exon_id "ENSE00001814148.2"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
930 chr22 HAVANA gene 17840837 18037850 . + . gene_id "ENSG00000099954.14"; transcript_id "ENSG00000099954.14"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2"; level 1; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
931 chr22 ENSEMBL transcript 17840837 18018834 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
932 chr22 ENSEMBL exon 17840837 17840913 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 1; exon_id "ENSE00001753284.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
933 chr22 ENSEMBL exon 17956630 17956724 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 2; exon_id "ENSE00003674122.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
934 chr22 ENSEMBL CDS 17956630 17956724 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 2; exon_id "ENSE00003674122.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
935 chr22 ENSEMBL exon 17976435 17976618 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 3; exon_id "ENSE00003616125.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
936 chr22 ENSEMBL CDS 17976435 17976618 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 3; exon_id "ENSE00003616125.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
937 chr22 ENSEMBL exon 17978442 17978581 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 4; exon_id "ENSE00003505471.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
938 chr22 ENSEMBL CDS 17978442 17978581 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 4; exon_id "ENSE00003505471.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
939 chr22 ENSEMBL exon 17979663 17979767 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 5; exon_id "ENSE00001775438.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
940 chr22 ENSEMBL CDS 17979663 17979767 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 5; exon_id "ENSE00001775438.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
941 chr22 ENSEMBL exon 17982114 17982163 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 6; exon_id "ENSE00001756874.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
942 chr22 ENSEMBL CDS 17982114 17982163 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 6; exon_id "ENSE00001756874.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
943 chr22 ENSEMBL exon 17983879 17984048 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 7; exon_id "ENSE00001684496.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
944 chr22 ENSEMBL CDS 17983879 17984048 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 7; exon_id "ENSE00001684496.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
945 chr22 ENSEMBL exon 18003144 18003357 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 8; exon_id "ENSE00001631215.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
946 chr22 ENSEMBL CDS 18003144 18003357 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 8; exon_id "ENSE00001631215.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
947 chr22 ENSEMBL exon 18016792 18016921 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 9; exon_id "ENSE00001704267.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
948 chr22 ENSEMBL CDS 18016792 18016921 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 9; exon_id "ENSE00001704267.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
949 chr22 ENSEMBL exon 18018209 18018246 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 10; exon_id "ENSE00001677027.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
950 chr22 ENSEMBL CDS 18018209 18018246 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 10; exon_id "ENSE00001677027.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
951 chr22 ENSEMBL exon 18018329 18018420 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 11; exon_id "ENSE00001720235.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
952 chr22 ENSEMBL CDS 18018329 18018420 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 11; exon_id "ENSE00001720235.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
953 chr22 ENSEMBL exon 18018682 18018834 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 12; exon_id "ENSE00001785068.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
954 chr22 ENSEMBL CDS 18018682 18018831 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 12; exon_id "ENSE00001785068.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
955 chr22 ENSEMBL stop_codon 18018832 18018834 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; exon_number 12; exon_id "ENSE00001785068.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
956 chr22 ENSEMBL UTR 17840837 17840913 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
957 chr22 ENSEMBL UTR 18018832 18018834 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000342247.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
958 chr22 HAVANA transcript 17840839 18033032 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
959 chr22 HAVANA exon 17840839 17840913 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 1; exon_id "ENSE00001748036.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
960 chr22 HAVANA exon 17956630 17956724 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 2; exon_id "ENSE00003664248.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
961 chr22 HAVANA exon 17976435 17976618 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 3; exon_id "ENSE00003554067.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
962 chr22 HAVANA exon 17978442 17978581 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 4; exon_id "ENSE00003472152.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
963 chr22 HAVANA CDS 17978526 17978581 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 4; exon_id "ENSE00003472152.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
964 chr22 HAVANA start_codon 17978526 17978528 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 4; exon_id "ENSE00003472152.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
965 chr22 HAVANA exon 17979663 17979767 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 5; exon_id "ENSE00001775438.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
966 chr22 HAVANA CDS 17979663 17979767 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 5; exon_id "ENSE00001775438.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
967 chr22 HAVANA exon 17982114 17982163 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 6; exon_id "ENSE00001756874.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
968 chr22 HAVANA CDS 17982114 17982163 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 6; exon_id "ENSE00001756874.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
969 chr22 HAVANA exon 17983879 17984048 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 7; exon_id "ENSE00001684496.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
970 chr22 HAVANA CDS 17983879 17984048 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 7; exon_id "ENSE00001684496.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
971 chr22 HAVANA exon 17990845 17990928 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 8; exon_id "ENSE00001598036.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
972 chr22 HAVANA CDS 17990845 17990928 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 8; exon_id "ENSE00001598036.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
973 chr22 HAVANA exon 18003144 18003297 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 9; exon_id "ENSE00001543635.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
974 chr22 HAVANA CDS 18003144 18003297 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 9; exon_id "ENSE00001543635.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
975 chr22 HAVANA exon 18016792 18016921 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 10; exon_id "ENSE00001704267.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
976 chr22 HAVANA CDS 18016792 18016921 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 10; exon_id "ENSE00001704267.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
977 chr22 HAVANA exon 18018209 18018246 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 11; exon_id "ENSE00001677027.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
978 chr22 HAVANA CDS 18018209 18018246 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 11; exon_id "ENSE00001677027.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
979 chr22 HAVANA exon 18018329 18018420 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 12; exon_id "ENSE00001720235.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
980 chr22 HAVANA CDS 18018329 18018420 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 12; exon_id "ENSE00001720235.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
981 chr22 HAVANA exon 18018682 18018808 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 13; exon_id "ENSE00001592054.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
982 chr22 HAVANA CDS 18018682 18018808 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 13; exon_id "ENSE00001592054.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
983 chr22 HAVANA exon 18020101 18020489 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 14; exon_id "ENSE00001805660.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
984 chr22 HAVANA CDS 18020101 18020489 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 14; exon_id "ENSE00001805660.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
985 chr22 HAVANA exon 18021528 18021656 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 15; exon_id "ENSE00001653782.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
986 chr22 HAVANA CDS 18021528 18021656 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 15; exon_id "ENSE00001653782.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
987 chr22 HAVANA exon 18021846 18022692 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 16; exon_id "ENSE00001713996.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
988 chr22 HAVANA CDS 18021846 18022692 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 16; exon_id "ENSE00001713996.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
989 chr22 HAVANA exon 18027841 18029254 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 17; exon_id "ENSE00001733616.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
990 chr22 HAVANA CDS 18027841 18029254 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 17; exon_id "ENSE00001733616.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
991 chr22 HAVANA exon 18031716 18031827 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 18; exon_id "ENSE00003678912.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
992 chr22 HAVANA CDS 18031716 18031827 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 18; exon_id "ENSE00003678912.1"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
993 chr22 HAVANA exon 18032535 18033032 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 19; exon_id "ENSE00001543623.2"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
994 chr22 HAVANA CDS 18032535 18032537 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 19; exon_id "ENSE00001543623.2"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
995 chr22 HAVANA stop_codon 18032538 18032540 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; exon_number 19; exon_id "ENSE00001543623.2"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
996 chr22 HAVANA UTR 17840839 17840913 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
997 chr22 HAVANA UTR 17956630 17956724 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
998 chr22 HAVANA UTR 17976435 17976618 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
999 chr22 HAVANA UTR 17978442 17978525 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1000 chr22 HAVANA UTR 18032538 18033032 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400585.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-002"; level 1; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316226.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1001 chr22 HAVANA transcript 17907318 17978490 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000497534.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CECR2-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1002 chr22 HAVANA exon 17907318 17907585 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000497534.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CECR2-003"; exon_number 1; exon_id "ENSE00001871173.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1003 chr22 HAVANA exon 17956630 17956724 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000497534.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CECR2-003"; exon_number 2; exon_id "ENSE00003664248.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1004 chr22 HAVANA exon 17976435 17976618 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000497534.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CECR2-003"; exon_number 3; exon_id "ENSE00003554067.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1005 chr22 HAVANA exon 17978442 17978490 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000497534.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CECR2-003"; exon_number 4; exon_id "ENSE00001886699.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1006 chr22 HAVANA transcript 17956135 18037850 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1007 chr22 HAVANA exon 17956135 17956201 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 1; exon_id "ENSE00001543647.3"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1008 chr22 HAVANA CDS 17956142 17956201 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 1; exon_id "ENSE00001543647.3"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1009 chr22 HAVANA start_codon 17956142 17956144 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 1; exon_id "ENSE00001543647.3"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1010 chr22 HAVANA exon 17956630 17956724 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 2; exon_id "ENSE00003580148.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1011 chr22 HAVANA CDS 17956630 17956724 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 2; exon_id "ENSE00003580148.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1012 chr22 HAVANA exon 17976435 17976618 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 3; exon_id "ENSE00003616125.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1013 chr22 HAVANA CDS 17976435 17976618 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 3; exon_id "ENSE00003616125.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1014 chr22 HAVANA exon 17978442 17978581 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 4; exon_id "ENSE00003505471.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1015 chr22 HAVANA CDS 17978442 17978581 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 4; exon_id "ENSE00003505471.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1016 chr22 HAVANA exon 17979663 17979767 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 5; exon_id "ENSE00001775438.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1017 chr22 HAVANA CDS 17979663 17979767 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 5; exon_id "ENSE00001775438.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1018 chr22 HAVANA exon 17982114 17982163 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 6; exon_id "ENSE00001756874.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1019 chr22 HAVANA CDS 17982114 17982163 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 6; exon_id "ENSE00001756874.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1020 chr22 HAVANA exon 17983879 17984048 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 7; exon_id "ENSE00001684496.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1021 chr22 HAVANA CDS 17983879 17984048 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 7; exon_id "ENSE00001684496.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1022 chr22 HAVANA exon 17990845 17990928 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 8; exon_id "ENSE00001598036.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1023 chr22 HAVANA CDS 17990845 17990928 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 8; exon_id "ENSE00001598036.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1024 chr22 HAVANA exon 18003144 18003297 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 9; exon_id "ENSE00001543635.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1025 chr22 HAVANA CDS 18003144 18003297 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 9; exon_id "ENSE00001543635.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1026 chr22 HAVANA exon 18016792 18016921 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 10; exon_id "ENSE00001704267.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1027 chr22 HAVANA CDS 18016792 18016921 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 10; exon_id "ENSE00001704267.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1028 chr22 HAVANA exon 18018209 18018246 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 11; exon_id "ENSE00001677027.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1029 chr22 HAVANA CDS 18018209 18018246 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 11; exon_id "ENSE00001677027.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1030 chr22 HAVANA exon 18018329 18018420 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 12; exon_id "ENSE00001720235.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1031 chr22 HAVANA CDS 18018329 18018420 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 12; exon_id "ENSE00001720235.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1032 chr22 HAVANA exon 18018682 18018808 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 13; exon_id "ENSE00001592054.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1033 chr22 HAVANA CDS 18018682 18018808 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 13; exon_id "ENSE00001592054.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1034 chr22 HAVANA exon 18020101 18020489 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 14; exon_id "ENSE00001805660.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1035 chr22 HAVANA CDS 18020101 18020489 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 14; exon_id "ENSE00001805660.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1036 chr22 HAVANA exon 18021528 18021656 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 15; exon_id "ENSE00001653782.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1037 chr22 HAVANA CDS 18021528 18021656 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 15; exon_id "ENSE00001653782.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1038 chr22 HAVANA exon 18021846 18022692 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 16; exon_id "ENSE00001713996.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1039 chr22 HAVANA CDS 18021846 18022692 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 16; exon_id "ENSE00001713996.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1040 chr22 HAVANA exon 18027838 18029254 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 17; exon_id "ENSE00001606307.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1041 chr22 HAVANA CDS 18027838 18029254 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 17; exon_id "ENSE00001606307.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1042 chr22 HAVANA exon 18031716 18031827 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 18; exon_id "ENSE00003678912.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1043 chr22 HAVANA CDS 18031716 18031827 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 18; exon_id "ENSE00003678912.1"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1044 chr22 HAVANA exon 18032535 18037850 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 19; exon_id "ENSE00001928898.2"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1045 chr22 HAVANA CDS 18032535 18032537 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 19; exon_id "ENSE00001928898.2"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1046 chr22 HAVANA stop_codon 18032538 18032540 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; exon_number 19; exon_id "ENSE00001928898.2"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1047 chr22 HAVANA UTR 17956135 17956141 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1048 chr22 HAVANA UTR 18032538 18037850 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000400573.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CECR2-001"; level 2; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000316104.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1049 chr22 ENSEMBL transcript 17956627 18033845 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1050 chr22 ENSEMBL exon 17956627 17956724 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 1; exon_id "ENSE00001708368.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1051 chr22 ENSEMBL CDS 17956627 17956724 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 1; exon_id "ENSE00001708368.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1052 chr22 ENSEMBL exon 17976435 17976618 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 2; exon_id "ENSE00003616125.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1053 chr22 ENSEMBL CDS 17976435 17976618 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 2; exon_id "ENSE00003616125.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1054 chr22 ENSEMBL exon 17978442 17978581 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 3; exon_id "ENSE00003505471.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1055 chr22 ENSEMBL CDS 17978442 17978581 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 3; exon_id "ENSE00003505471.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1056 chr22 ENSEMBL exon 17979663 17979767 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 4; exon_id "ENSE00001775438.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1057 chr22 ENSEMBL CDS 17979663 17979767 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 4; exon_id "ENSE00001775438.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1058 chr22 ENSEMBL exon 17982114 17982163 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 5; exon_id "ENSE00001756874.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1059 chr22 ENSEMBL CDS 17982114 17982163 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 5; exon_id "ENSE00001756874.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1060 chr22 ENSEMBL exon 17983879 17984048 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 6; exon_id "ENSE00001684496.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1061 chr22 ENSEMBL CDS 17983879 17984048 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 6; exon_id "ENSE00001684496.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1062 chr22 ENSEMBL exon 17990845 17990928 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 7; exon_id "ENSE00001598036.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1063 chr22 ENSEMBL CDS 17990845 17990928 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 7; exon_id "ENSE00001598036.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1064 chr22 ENSEMBL exon 18003144 18003357 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 8; exon_id "ENSE00001631215.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1065 chr22 ENSEMBL CDS 18003144 18003357 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 8; exon_id "ENSE00001631215.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1066 chr22 ENSEMBL exon 18016792 18016921 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 9; exon_id "ENSE00001704267.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1067 chr22 ENSEMBL CDS 18016792 18016921 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 9; exon_id "ENSE00001704267.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1068 chr22 ENSEMBL exon 18018209 18018246 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 10; exon_id "ENSE00001677027.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1069 chr22 ENSEMBL CDS 18018209 18018246 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 10; exon_id "ENSE00001677027.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1070 chr22 ENSEMBL exon 18018329 18018420 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 11; exon_id "ENSE00001720235.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1071 chr22 ENSEMBL CDS 18018329 18018420 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 11; exon_id "ENSE00001720235.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1072 chr22 ENSEMBL exon 18018682 18018808 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 12; exon_id "ENSE00001592054.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1073 chr22 ENSEMBL CDS 18018682 18018808 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 12; exon_id "ENSE00001592054.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1074 chr22 ENSEMBL exon 18020101 18020489 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 13; exon_id "ENSE00001805660.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1075 chr22 ENSEMBL CDS 18020101 18020489 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 13; exon_id "ENSE00001805660.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1076 chr22 ENSEMBL exon 18021528 18021656 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 14; exon_id "ENSE00001653782.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1077 chr22 ENSEMBL CDS 18021528 18021656 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 14; exon_id "ENSE00001653782.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1078 chr22 ENSEMBL exon 18021846 18022692 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 15; exon_id "ENSE00001713996.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1079 chr22 ENSEMBL CDS 18021846 18022692 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 15; exon_id "ENSE00001713996.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1080 chr22 ENSEMBL exon 18027838 18029254 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 16; exon_id "ENSE00001606307.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1081 chr22 ENSEMBL CDS 18027838 18029254 . + 2 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 16; exon_id "ENSE00001606307.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1082 chr22 ENSEMBL exon 18031716 18031827 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 17; exon_id "ENSE00003678912.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1083 chr22 ENSEMBL CDS 18031716 18031827 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 17; exon_id "ENSE00003678912.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1084 chr22 ENSEMBL exon 18032535 18033845 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 18; exon_id "ENSE00001426606.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1085 chr22 ENSEMBL CDS 18032535 18032537 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 18; exon_id "ENSE00001426606.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1086 chr22 ENSEMBL stop_codon 18032538 18032540 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; exon_number 18; exon_id "ENSE00001426606.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1087 chr22 ENSEMBL UTR 18032538 18033845 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000262608.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR2-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150072.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1088 chr22 HAVANA transcript 18028689 18033833 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000355219.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CECR2-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000340298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1089 chr22 HAVANA exon 18028689 18029254 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000355219.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CECR2-004"; exon_number 1; exon_id "ENSE00001798424.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000340298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1090 chr22 HAVANA CDS 18028689 18029254 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000355219.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CECR2-004"; exon_number 1; exon_id "ENSE00001798424.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000340298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1091 chr22 HAVANA exon 18029928 18030094 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000355219.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CECR2-004"; exon_number 2; exon_id "ENSE00001605275.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000340298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1092 chr22 HAVANA CDS 18029928 18030015 . + 1 gene_id "ENSG00000099954.14"; transcript_id "ENST00000355219.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CECR2-004"; exon_number 2; exon_id "ENSE00001605275.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000340298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1093 chr22 HAVANA stop_codon 18030016 18030018 . + 0 gene_id "ENSG00000099954.14"; transcript_id "ENST00000355219.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CECR2-004"; exon_number 2; exon_id "ENSE00001605275.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000340298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1094 chr22 HAVANA exon 18031716 18031827 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000355219.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CECR2-004"; exon_number 3; exon_id "ENSE00003684690.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000340298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1095 chr22 HAVANA exon 18032535 18033833 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000355219.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CECR2-004"; exon_number 4; exon_id "ENSE00001434190.3"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000340298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1096 chr22 HAVANA UTR 18030016 18030094 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000355219.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CECR2-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000340298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1097 chr22 HAVANA UTR 18031716 18031827 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000355219.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CECR2-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000340298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1098 chr22 HAVANA UTR 18032535 18033833 . + . gene_id "ENSG00000099954.14"; transcript_id "ENST00000355219.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CECR2-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150072.7"; havana_transcript "OTTHUMT00000340298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1099 chr22 HAVANA gene 17897744 17898875 . + . gene_id "ENSG00000229492.1"; transcript_id "ENSG00000229492.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC004019.10"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC004019.10"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150062.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1100 chr22 HAVANA transcript 17897744 17898875 . + . gene_id "ENSG00000229492.1"; transcript_id "ENST00000455617.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC004019.10"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC004019.10-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150062.1"; havana_transcript "OTTHUMT00000316075.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1101 chr22 HAVANA exon 17897744 17898875 . + . gene_id "ENSG00000229492.1"; transcript_id "ENST00000455617.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC004019.10"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC004019.10-001"; exon_number 1; exon_id "ENSE00001756696.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150062.1"; havana_transcript "OTTHUMT00000316075.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1102 chr22 HAVANA gene 17903436 17903823 . - . gene_id "ENSG00000232305.1"; transcript_id "ENSG00000232305.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CLCP1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "CLCP1"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000155638.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1103 chr22 HAVANA transcript 17903436 17903823 . - . gene_id "ENSG00000232305.1"; transcript_id "ENST00000455251.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CLCP1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "CLCP1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155638.1"; havana_transcript "OTTHUMT00000340935.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1104 chr22 HAVANA exon 17903436 17903823 . - . gene_id "ENSG00000232305.1"; transcript_id "ENST00000455251.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CLCP1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "CLCP1-001"; exon_number 1; exon_id "ENSE00001625991.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155638.1"; havana_transcript "OTTHUMT00000340935.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1105 chr22 HAVANA gene 17997708 17998061 . - . gene_id "ENSG00000228045.1"; transcript_id "ENSG00000228045.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "DNAJA1P6"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "DNAJA1P6"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150091.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1106 chr22 HAVANA transcript 17997708 17998061 . - . gene_id "ENSG00000228045.1"; transcript_id "ENST00000437347.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "DNAJA1P6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "DNAJA1P6-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150091.1"; havana_transcript "OTTHUMT00000316224.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1107 chr22 HAVANA exon 17997708 17998061 . - . gene_id "ENSG00000228045.1"; transcript_id "ENST00000437347.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "DNAJA1P6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "DNAJA1P6-001"; exon_number 1; exon_id "ENSE00001538132.2"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150091.1"; havana_transcript "OTTHUMT00000316224.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1108 chr22 HAVANA gene 18036250 18037847 . + . gene_id "ENSG00000272675.1"; transcript_id "ENSG00000272675.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC004019.18"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AC004019.18"; level 2; havana_gene "OTTHUMG00000185891.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1109 chr22 HAVANA transcript 18036250 18037847 . + . gene_id "ENSG00000272675.1"; transcript_id "ENST00000608960.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC004019.18"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC004019.18-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000185891.1"; havana_transcript "OTTHUMT00000471653.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1110 chr22 HAVANA exon 18036250 18037847 . + . gene_id "ENSG00000272675.1"; transcript_id "ENST00000608960.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC004019.18"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC004019.18-001"; exon_number 1; exon_id "ENSE00003706105.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000185891.1"; havana_transcript "OTTHUMT00000471653.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1111 chr22 HAVANA gene 18043139 18073760 . + . gene_id "ENSG00000182902.9"; transcript_id "ENSG00000182902.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18"; level 2; havana_gene "OTTHUMG00000150089.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1112 chr22 HAVANA transcript 18043139 18073760 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1113 chr22 HAVANA exon 18043139 18043413 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 1; exon_id "ENSE00001955974.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1114 chr22 HAVANA exon 18049989 18050051 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 2; exon_id "ENSE00001433126.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1115 chr22 HAVANA exon 18062511 18062730 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 3; exon_id "ENSE00003663381.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1116 chr22 HAVANA CDS 18062711 18062730 . + 0 gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 3; exon_id "ENSE00003663381.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1117 chr22 HAVANA start_codon 18062711 18062713 . + 0 gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 3; exon_id "ENSE00003663381.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1118 chr22 HAVANA exon 18063803 18063925 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 4; exon_id "ENSE00003532916.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1119 chr22 HAVANA CDS 18063803 18063925 . + 1 gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 4; exon_id "ENSE00003532916.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1120 chr22 HAVANA exon 18064124 18064179 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 5; exon_id "ENSE00003475345.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1121 chr22 HAVANA CDS 18064124 18064179 . + 1 gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 5; exon_id "ENSE00003475345.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1122 chr22 HAVANA exon 18065329 18065419 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 6; exon_id "ENSE00003558498.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1123 chr22 HAVANA CDS 18065329 18065419 . + 2 gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 6; exon_id "ENSE00003558498.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1124 chr22 HAVANA exon 18066182 18066300 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 7; exon_id "ENSE00001312572.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1125 chr22 HAVANA CDS 18066182 18066300 . + 1 gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 7; exon_id "ENSE00001312572.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1126 chr22 HAVANA exon 18069902 18070067 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 8; exon_id "ENSE00001298916.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1127 chr22 HAVANA CDS 18069902 18070067 . + 2 gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 8; exon_id "ENSE00001298916.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1128 chr22 HAVANA exon 18070691 18070845 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 9; exon_id "ENSE00001311106.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1129 chr22 HAVANA CDS 18070691 18070845 . + 1 gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 9; exon_id "ENSE00001311106.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1130 chr22 HAVANA exon 18072356 18072431 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 10; exon_id "ENSE00001321506.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1131 chr22 HAVANA CDS 18072356 18072431 . + 2 gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 10; exon_id "ENSE00001321506.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1132 chr22 HAVANA exon 18072861 18073760 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 11; exon_id "ENSE00003708716.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1133 chr22 HAVANA CDS 18072861 18072999 . + 1 gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 11; exon_id "ENSE00003708716.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1134 chr22 HAVANA stop_codon 18073000 18073002 . + 0 gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; exon_number 11; exon_id "ENSE00003708716.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1135 chr22 HAVANA UTR 18043139 18043413 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1136 chr22 HAVANA UTR 18049989 18050051 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1137 chr22 HAVANA UTR 18062511 18062710 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1138 chr22 HAVANA UTR 18073000 18073760 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000327451.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1139 chr22 HAVANA transcript 18043150 18073647 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1140 chr22 HAVANA exon 18043150 18043413 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 1; exon_id "ENSE00001540287.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1141 chr22 HAVANA exon 18062511 18062730 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 2; exon_id "ENSE00003663381.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1142 chr22 HAVANA CDS 18062711 18062730 . + 0 gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 2; exon_id "ENSE00003663381.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1143 chr22 HAVANA start_codon 18062711 18062713 . + 0 gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 2; exon_id "ENSE00003663381.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1144 chr22 HAVANA exon 18063803 18063925 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 3; exon_id "ENSE00003532916.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1145 chr22 HAVANA CDS 18063803 18063925 . + 1 gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 3; exon_id "ENSE00003532916.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1146 chr22 HAVANA exon 18064124 18064179 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 4; exon_id "ENSE00003475345.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1147 chr22 HAVANA CDS 18064124 18064179 . + 1 gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 4; exon_id "ENSE00003475345.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1148 chr22 HAVANA exon 18065329 18065419 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 5; exon_id "ENSE00003558498.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1149 chr22 HAVANA CDS 18065329 18065419 . + 2 gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 5; exon_id "ENSE00003558498.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1150 chr22 HAVANA exon 18066182 18066300 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 6; exon_id "ENSE00001312572.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1151 chr22 HAVANA CDS 18066182 18066300 . + 1 gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 6; exon_id "ENSE00001312572.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1152 chr22 HAVANA exon 18069902 18070067 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 7; exon_id "ENSE00001298916.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1153 chr22 HAVANA CDS 18069902 18070067 . + 2 gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 7; exon_id "ENSE00001298916.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1154 chr22 HAVANA exon 18070691 18070845 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 8; exon_id "ENSE00001311106.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1155 chr22 HAVANA CDS 18070691 18070845 . + 1 gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 8; exon_id "ENSE00001311106.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1156 chr22 HAVANA exon 18072356 18072431 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 9; exon_id "ENSE00001321506.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1157 chr22 HAVANA CDS 18072356 18072431 . + 2 gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 9; exon_id "ENSE00001321506.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1158 chr22 HAVANA exon 18072861 18073647 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 10; exon_id "ENSE00001291333.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1159 chr22 HAVANA CDS 18072861 18072999 . + 1 gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 10; exon_id "ENSE00001291333.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1160 chr22 HAVANA stop_codon 18073000 18073002 . + 0 gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; exon_number 10; exon_id "ENSE00001291333.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1161 chr22 HAVANA UTR 18043150 18043413 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1162 chr22 HAVANA UTR 18062511 18062710 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1163 chr22 HAVANA UTR 18073000 18073647 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000399813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A18-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13744.1"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1164 chr22 HAVANA transcript 18043164 18050321 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000496051.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A18-004"; level 2; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316217.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1165 chr22 HAVANA exon 18043164 18043413 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000496051.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A18-004"; exon_number 1; exon_id "ENSE00001430286.2"; level 2; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316217.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1166 chr22 HAVANA exon 18049989 18050321 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000496051.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A18-004"; exon_number 2; exon_id "ENSE00001838433.1"; level 2; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316217.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1167 chr22 HAVANA transcript 18043289 18064974 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000467228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC25A18-003"; level 2; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316216.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1168 chr22 HAVANA exon 18043289 18043413 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000467228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC25A18-003"; exon_number 1; exon_id "ENSE00001866696.1"; level 2; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316216.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1169 chr22 HAVANA exon 18049989 18050051 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000467228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC25A18-003"; exon_number 2; exon_id "ENSE00001433126.1"; level 2; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316216.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1170 chr22 HAVANA exon 18062511 18063925 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000467228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC25A18-003"; exon_number 3; exon_id "ENSE00001903654.1"; level 2; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316216.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1171 chr22 HAVANA exon 18064124 18064974 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000467228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC25A18-003"; exon_number 4; exon_id "ENSE00001842043.1"; level 2; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316216.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1172 chr22 HAVANA transcript 18049766 18066250 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000497401.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A18-006"; level 2; tag "basic"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1173 chr22 HAVANA exon 18049766 18050051 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000497401.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A18-006"; exon_number 1; exon_id "ENSE00001910801.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1174 chr22 HAVANA exon 18062511 18062730 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000497401.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A18-006"; exon_number 2; exon_id "ENSE00003525417.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1175 chr22 HAVANA exon 18063803 18063925 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000497401.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A18-006"; exon_number 3; exon_id "ENSE00003525992.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1176 chr22 HAVANA exon 18064124 18064179 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000497401.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A18-006"; exon_number 4; exon_id "ENSE00003545400.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1177 chr22 HAVANA exon 18065329 18065419 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000497401.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A18-006"; exon_number 5; exon_id "ENSE00003506584.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1178 chr22 HAVANA exon 18066182 18066250 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000497401.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A18-006"; exon_number 6; exon_id "ENSE00001822244.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1179 chr22 HAVANA transcript 18049772 18050458 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000469889.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A18-005"; level 2; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316218.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1180 chr22 HAVANA exon 18049772 18049861 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000469889.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A18-005"; exon_number 1; exon_id "ENSE00001946660.1"; level 2; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316218.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1181 chr22 HAVANA exon 18049989 18050458 . + . gene_id "ENSG00000182902.9"; transcript_id "ENST00000469889.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A18"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A18-005"; exon_number 2; exon_id "ENSE00001946925.1"; level 2; havana_gene "OTTHUMG00000150089.3"; havana_transcript "OTTHUMT00000316218.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1182 chr22 HAVANA gene 18062923 18071958 . - . gene_id "ENSG00000236754.1"; transcript_id "ENSG00000236754.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC004019.13"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AC004019.13"; level 1; havana_gene "OTTHUMG00000150092.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1183 chr22 HAVANA transcript 18062923 18071958 . - . gene_id "ENSG00000236754.1"; transcript_id "ENST00000443935.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC004019.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC004019.13-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150092.1"; havana_transcript "OTTHUMT00000316225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1184 chr22 HAVANA exon 18070633 18071958 . - . gene_id "ENSG00000236754.1"; transcript_id "ENST00000443935.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC004019.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC004019.13-001"; exon_number 1; exon_id "ENSE00001693766.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150092.1"; havana_transcript "OTTHUMT00000316225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1185 chr22 HAVANA exon 18065017 18065138 . - . gene_id "ENSG00000236754.1"; transcript_id "ENST00000443935.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC004019.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC004019.13-001"; exon_number 2; exon_id "ENSE00001656529.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150092.1"; havana_transcript "OTTHUMT00000316225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1186 chr22 HAVANA exon 18064100 18064314 . - . gene_id "ENSG00000236754.1"; transcript_id "ENST00000443935.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC004019.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC004019.13-001"; exon_number 3; exon_id "ENSE00001716866.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150092.1"; havana_transcript "OTTHUMT00000316225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1187 chr22 HAVANA exon 18062923 18063097 . - . gene_id "ENSG00000236754.1"; transcript_id "ENST00000443935.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC004019.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC004019.13-001"; exon_number 4; exon_id "ENSE00001709332.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150092.1"; havana_transcript "OTTHUMT00000316225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1188 chr22 HAVANA gene 18074902 18111584 . - . gene_id "ENSG00000131100.8"; transcript_id "ENSG00000131100.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1"; level 2; havana_gene "OTTHUMG00000059320.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1189 chr22 HAVANA transcript 18074902 18111584 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1190 chr22 HAVANA exon 18111369 18111584 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 1; exon_id "ENSE00001332821.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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1191 chr22 HAVANA CDS 18111369 18111401 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 1; exon_id "ENSE00001332821.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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1192 chr22 HAVANA start_codon 18111399 18111401 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 1; exon_id "ENSE00001332821.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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1193 chr22 HAVANA exon 18102227 18102292 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 2; exon_id "ENSE00003633644.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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1194 chr22 HAVANA CDS 18102227 18102292 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 2; exon_id "ENSE00003633644.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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1195 chr22 HAVANA exon 18095977 18096086 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 3; exon_id "ENSE00003674940.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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1196 chr22 HAVANA CDS 18095977 18096086 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 3; exon_id "ENSE00003674940.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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1197 chr22 HAVANA exon 18095578 18095644 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 4; exon_id "ENSE00003642837.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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1198 chr22 HAVANA CDS 18095578 18095644 . - 1 gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 4; exon_id "ENSE00003642837.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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1199 chr22 HAVANA exon 18083858 18083947 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 5; exon_id "ENSE00003646084.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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1200 chr22 HAVANA CDS 18083858 18083947 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 5; exon_id "ENSE00003646084.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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1201 chr22 HAVANA exon 18082793 18082861 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 6; exon_id "ENSE00003503886.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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1202 chr22 HAVANA CDS 18082793 18082861 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 6; exon_id "ENSE00003503886.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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1203 chr22 HAVANA exon 18080960 18081054 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 7; exon_id "ENSE00000650333.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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1204 chr22 HAVANA CDS 18080960 18081054 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 7; exon_id "ENSE00000650333.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1205 chr22 HAVANA exon 18077295 18077382 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 8; exon_id "ENSE00000650331.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1206 chr22 HAVANA CDS 18077295 18077382 . - 1 gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 8; exon_id "ENSE00000650331.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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1207 chr22 HAVANA exon 18074902 18075502 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 9; exon_id "ENSE00001141765.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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1208 chr22 HAVANA CDS 18075443 18075502 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 9; exon_id "ENSE00001141765.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
1209 chr22 HAVANA stop_codon 18075440 18075442 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; exon_number 9; exon_id "ENSE00001141765.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1210 chr22 HAVANA UTR 18111402 18111584 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1211 chr22 HAVANA UTR 18074902 18075442 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1212 chr22 HAVANA transcript 18074935 18111513 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1213 chr22 HAVANA exon 18111369 18111513 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 1; exon_id "ENSE00001908260.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1214 chr22 HAVANA CDS 18111369 18111401 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 1; exon_id "ENSE00001908260.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1215 chr22 HAVANA start_codon 18111399 18111401 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 1; exon_id "ENSE00001908260.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1216 chr22 HAVANA exon 18102227 18102292 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 2; exon_id "ENSE00003633644.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1217 chr22 HAVANA CDS 18102227 18102292 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 2; exon_id "ENSE00003633644.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1218 chr22 HAVANA exon 18095977 18096086 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 3; exon_id "ENSE00003674940.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1219 chr22 HAVANA CDS 18095977 18096086 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 3; exon_id "ENSE00003674940.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1220 chr22 HAVANA exon 18095578 18095644 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 4; exon_id "ENSE00003642837.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1221 chr22 HAVANA CDS 18095578 18095644 . - 1 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 4; exon_id "ENSE00003642837.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1222 chr22 HAVANA exon 18082793 18082861 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 5; exon_id "ENSE00003503886.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1223 chr22 HAVANA CDS 18082793 18082861 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 5; exon_id "ENSE00003503886.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1224 chr22 HAVANA exon 18080960 18081054 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 6; exon_id "ENSE00000650333.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1225 chr22 HAVANA CDS 18080960 18081054 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 6; exon_id "ENSE00000650333.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1226 chr22 HAVANA exon 18077295 18077382 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 7; exon_id "ENSE00000650331.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1227 chr22 HAVANA CDS 18077295 18077382 . - 1 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 7; exon_id "ENSE00000650331.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1228 chr22 HAVANA exon 18074935 18075502 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 8; exon_id "ENSE00001953940.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1229 chr22 HAVANA CDS 18075443 18075502 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 8; exon_id "ENSE00001953940.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1230 chr22 HAVANA stop_codon 18075440 18075442 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; exon_number 8; exon_id "ENSE00001953940.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1231 chr22 HAVANA UTR 18111402 18111513 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1232 chr22 HAVANA UTR 18074935 18075442 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1233 chr22 HAVANA transcript 18075175 18111515 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1234 chr22 HAVANA exon 18111369 18111515 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 1; exon_id "ENSE00003539390.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1235 chr22 HAVANA CDS 18111369 18111401 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 1; exon_id "ENSE00003539390.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1236 chr22 HAVANA start_codon 18111399 18111401 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 1; exon_id "ENSE00003539390.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1237 chr22 HAVANA exon 18095977 18096086 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 2; exon_id "ENSE00003674940.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1238 chr22 HAVANA CDS 18095977 18096086 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 2; exon_id "ENSE00003674940.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1239 chr22 HAVANA exon 18095578 18095644 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 3; exon_id "ENSE00003642837.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1240 chr22 HAVANA CDS 18095578 18095644 . - 1 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 3; exon_id "ENSE00003642837.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1241 chr22 HAVANA exon 18083858 18083947 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 4; exon_id "ENSE00003646084.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1242 chr22 HAVANA CDS 18083858 18083947 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 4; exon_id "ENSE00003646084.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1243 chr22 HAVANA exon 18082793 18082861 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 5; exon_id "ENSE00003503886.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1244 chr22 HAVANA CDS 18082793 18082861 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 5; exon_id "ENSE00003503886.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1245 chr22 HAVANA exon 18080960 18081054 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 6; exon_id "ENSE00000650333.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1246 chr22 HAVANA CDS 18080960 18081054 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 6; exon_id "ENSE00000650333.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1247 chr22 HAVANA exon 18077295 18077382 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 7; exon_id "ENSE00000650331.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1248 chr22 HAVANA CDS 18077295 18077382 . - 1 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 7; exon_id "ENSE00000650331.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1249 chr22 HAVANA exon 18075175 18075502 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 8; exon_id "ENSE00001852568.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1250 chr22 HAVANA CDS 18075443 18075502 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 8; exon_id "ENSE00001852568.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1251 chr22 HAVANA stop_codon 18075440 18075442 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; exon_number 8; exon_id "ENSE00001852568.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1252 chr22 HAVANA UTR 18111402 18111515 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1253 chr22 HAVANA UTR 18075175 18075442 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1254 chr22 HAVANA transcript 18075435 18078058 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000473248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-009"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1255 chr22 HAVANA exon 18077295 18078058 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000473248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-009"; exon_number 1; exon_id "ENSE00001881345.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1256 chr22 HAVANA exon 18075435 18075502 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000473248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-009"; exon_number 2; exon_id "ENSE00001858679.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1257 chr22 HAVANA transcript 18077305 18111499 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1258 chr22 HAVANA exon 18111369 18111499 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 1; exon_id "ENSE00001788527.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1259 chr22 HAVANA exon 18102227 18102292 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 2; exon_id "ENSE00003486806.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1260 chr22 HAVANA CDS 18102227 18102234 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 2; exon_id "ENSE00003486806.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1261 chr22 HAVANA start_codon 18102232 18102234 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 2; exon_id "ENSE00003486806.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1262 chr22 HAVANA exon 18101800 18101893 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 3; exon_id "ENSE00001645476.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1263 chr22 HAVANA CDS 18101800 18101893 . - 1 gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 3; exon_id "ENSE00001645476.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1264 chr22 HAVANA exon 18095977 18096086 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 4; exon_id "ENSE00003674940.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1265 chr22 HAVANA CDS 18095977 18096086 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 4; exon_id "ENSE00003674940.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1266 chr22 HAVANA exon 18095578 18095644 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 5; exon_id "ENSE00003642837.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1267 chr22 HAVANA CDS 18095578 18095644 . - 1 gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 5; exon_id "ENSE00003642837.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1268 chr22 HAVANA exon 18083858 18083947 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 6; exon_id "ENSE00003646084.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1269 chr22 HAVANA CDS 18083858 18083947 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 6; exon_id "ENSE00003646084.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1270 chr22 HAVANA exon 18082793 18082861 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 7; exon_id "ENSE00003503886.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1271 chr22 HAVANA CDS 18082793 18082861 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 7; exon_id "ENSE00003503886.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1272 chr22 HAVANA exon 18080960 18081054 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 8; exon_id "ENSE00000650333.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1273 chr22 HAVANA CDS 18080960 18081054 . - 0 gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 8; exon_id "ENSE00000650333.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1274 chr22 HAVANA exon 18077305 18077382 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 9; exon_id "ENSE00001773739.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1275 chr22 HAVANA CDS 18077305 18077382 . - 1 gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; exon_number 9; exon_id "ENSE00001773739.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1276 chr22 HAVANA UTR 18111369 18111499 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1277 chr22 HAVANA UTR 18102235 18102292 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000413576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1278 chr22 HAVANA transcript 18080767 18102294 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000481365.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-008"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353466.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1279 chr22 HAVANA exon 18102227 18102294 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000481365.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-008"; exon_number 1; exon_id "ENSE00001891370.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353466.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1280 chr22 HAVANA exon 18095977 18096086 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000481365.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-008"; exon_number 2; exon_id "ENSE00003563528.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353466.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1281 chr22 HAVANA exon 18095578 18095644 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000481365.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-008"; exon_number 3; exon_id "ENSE00003671018.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353466.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1282 chr22 HAVANA exon 18083858 18083947 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000481365.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-008"; exon_number 4; exon_id "ENSE00003481688.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353466.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1283 chr22 HAVANA exon 18082793 18082861 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000481365.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-008"; exon_number 5; exon_id "ENSE00003522232.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353466.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1284 chr22 HAVANA exon 18080767 18081054 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000481365.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-008"; exon_number 6; exon_id "ENSE00001826224.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353466.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1285 chr22 HAVANA transcript 18083446 18102294 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000484653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-007"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353465.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1286 chr22 HAVANA exon 18102227 18102294 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000484653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-007"; exon_number 1; exon_id "ENSE00001891370.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353465.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1287 chr22 HAVANA exon 18095977 18096086 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000484653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-007"; exon_number 2; exon_id "ENSE00003563528.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353465.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1288 chr22 HAVANA exon 18095578 18095644 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000484653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-007"; exon_number 3; exon_id "ENSE00003671018.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353465.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1289 chr22 HAVANA exon 18083446 18083947 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000484653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-007"; exon_number 4; exon_id "ENSE00001951335.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353465.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1290 chr22 HAVANA transcript 18095380 18111514 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000478963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316222.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1291 chr22 HAVANA exon 18111369 18111514 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000478963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-003"; exon_number 1; exon_id "ENSE00001904722.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316222.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1292 chr22 HAVANA exon 18102227 18102292 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000478963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-003"; exon_number 2; exon_id "ENSE00003566625.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316222.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1293 chr22 HAVANA exon 18095977 18096086 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000478963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-003"; exon_number 3; exon_id "ENSE00003563528.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316222.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1294 chr22 HAVANA exon 18095380 18095644 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000478963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-003"; exon_number 4; exon_id "ENSE00001922247.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316222.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1295 chr22 HAVANA transcript 18095742 18111515 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000460085.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-002"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316221.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1296 chr22 HAVANA exon 18111369 18111515 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000460085.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-002"; exon_number 1; exon_id "ENSE00003527359.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316221.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1297 chr22 HAVANA exon 18102227 18102292 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000460085.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-002"; exon_number 2; exon_id "ENSE00003566625.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316221.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1298 chr22 HAVANA exon 18095742 18096086 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000460085.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ATP6V1E1-002"; exon_number 3; exon_id "ENSE00001840700.1"; level 2; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000316221.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1299 chr22 HAVANA gene 18111621 18213388 . + . gene_id "ENSG00000099968.13"; transcript_id "ENSG00000099968.13"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13"; level 1; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1300 chr22 HAVANA transcript 18111621 18178975 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399781.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCL2L13-008"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316191.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1301 chr22 HAVANA exon 18111621 18111672 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399781.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCL2L13-008"; exon_number 1; exon_id "ENSE00001540168.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316191.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1302 chr22 HAVANA exon 18120868 18121466 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399781.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCL2L13-008"; exon_number 2; exon_id "ENSE00001540171.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316191.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1303 chr22 HAVANA exon 18138428 18138598 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399781.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCL2L13-008"; exon_number 3; exon_id "ENSE00003461313.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316191.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1304 chr22 HAVANA exon 18165980 18166087 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399781.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCL2L13-008"; exon_number 4; exon_id "ENSE00003637389.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316191.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1305 chr22 HAVANA exon 18178907 18178975 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399781.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCL2L13-008"; exon_number 5; exon_id "ENSE00001540167.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316191.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1306 chr22 HAVANA transcript 18111682 18185194 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1307 chr22 HAVANA exon 18111682 18111771 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; exon_number 1; exon_id "ENSE00001540172.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1308 chr22 HAVANA exon 18120868 18121466 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; exon_number 2; exon_id "ENSE00001540171.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1309 chr22 HAVANA exon 18138428 18138598 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; exon_number 3; exon_id "ENSE00003647715.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1310 chr22 HAVANA CDS 18138478 18138598 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; exon_number 3; exon_id "ENSE00003647715.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1311 chr22 HAVANA start_codon 18138478 18138480 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; exon_number 3; exon_id "ENSE00003647715.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1312 chr22 HAVANA exon 18165980 18166087 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; exon_number 4; exon_id "ENSE00003693073.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1313 chr22 HAVANA CDS 18165980 18166087 . + 2 gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; exon_number 4; exon_id "ENSE00003693073.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1314 chr22 HAVANA exon 18171752 18171908 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; exon_number 5; exon_id "ENSE00003591214.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1315 chr22 HAVANA CDS 18171752 18171908 . + 2 gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; exon_number 5; exon_id "ENSE00003591214.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1316 chr22 HAVANA exon 18178907 18178976 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; exon_number 6; exon_id "ENSE00003497481.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1317 chr22 HAVANA CDS 18178907 18178976 . + 1 gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; exon_number 6; exon_id "ENSE00003497481.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1318 chr22 HAVANA exon 18185009 18185194 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; exon_number 7; exon_id "ENSE00001540169.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1319 chr22 HAVANA CDS 18185009 18185155 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; exon_number 7; exon_id "ENSE00001540169.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1320 chr22 HAVANA stop_codon 18185156 18185158 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; exon_number 7; exon_id "ENSE00001540169.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1321 chr22 HAVANA UTR 18111682 18111771 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1322 chr22 HAVANA UTR 18120868 18121466 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1323 chr22 HAVANA UTR 18138428 18138477 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1324 chr22 HAVANA UTR 18185156 18185194 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1325 chr22 HAVANA transcript 18121356 18211487 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1326 chr22 HAVANA exon 18121356 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 1; exon_id "ENSE00001898002.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1327 chr22 HAVANA exon 18138428 18138598 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 2; exon_id "ENSE00003647715.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1328 chr22 HAVANA CDS 18138478 18138598 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 2; exon_id "ENSE00003647715.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1329 chr22 HAVANA start_codon 18138478 18138480 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 2; exon_id "ENSE00003647715.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1330 chr22 HAVANA exon 18165980 18166087 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 3; exon_id "ENSE00003693073.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1331 chr22 HAVANA CDS 18165980 18166087 . + 2 gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 3; exon_id "ENSE00003693073.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1332 chr22 HAVANA exon 18171752 18171908 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 4; exon_id "ENSE00003591214.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1333 chr22 HAVANA CDS 18171752 18171908 . + 2 gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 4; exon_id "ENSE00003591214.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1334 chr22 HAVANA exon 18178907 18178976 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 5; exon_id "ENSE00003497481.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1335 chr22 HAVANA CDS 18178907 18178976 . + 1 gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 5; exon_id "ENSE00003497481.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1336 chr22 HAVANA exon 18185009 18185152 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 6; exon_id "ENSE00003546934.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1337 chr22 HAVANA CDS 18185009 18185152 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 6; exon_id "ENSE00003546934.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1338 chr22 HAVANA exon 18209443 18211487 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 7; exon_id "ENSE00001680488.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1339 chr22 HAVANA CDS 18209443 18210297 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 7; exon_id "ENSE00001680488.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1340 chr22 HAVANA stop_codon 18210298 18210300 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; exon_number 7; exon_id "ENSE00001680488.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1341 chr22 HAVANA UTR 18121356 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1342 chr22 HAVANA UTR 18138428 18138477 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1343 chr22 HAVANA UTR 18210298 18211487 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000317582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1344 chr22 HAVANA transcript 18121507 18211465 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1345 chr22 HAVANA exon 18121507 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; exon_number 1; exon_id "ENSE00001412972.2"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1346 chr22 HAVANA exon 18138428 18138598 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; exon_number 2; exon_id "ENSE00003647715.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1347 chr22 HAVANA CDS 18138478 18138598 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; exon_number 2; exon_id "ENSE00003647715.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1348 chr22 HAVANA start_codon 18138478 18138480 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; exon_number 2; exon_id "ENSE00003647715.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1349 chr22 HAVANA exon 18165980 18166087 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; exon_number 3; exon_id "ENSE00003693073.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1350 chr22 HAVANA CDS 18165980 18166087 . + 2 gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; exon_number 3; exon_id "ENSE00003693073.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1351 chr22 HAVANA exon 18178907 18178976 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; exon_number 4; exon_id "ENSE00003460053.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1352 chr22 HAVANA CDS 18178907 18178911 . + 2 gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; exon_number 4; exon_id "ENSE00003460053.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1353 chr22 HAVANA stop_codon 18178912 18178914 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; exon_number 4; exon_id "ENSE00003460053.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1354 chr22 HAVANA exon 18185009 18185152 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; exon_number 5; exon_id "ENSE00003503185.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1355 chr22 HAVANA exon 18209443 18211465 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; exon_number 6; exon_id "ENSE00003520084.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1356 chr22 HAVANA UTR 18121507 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1357 chr22 HAVANA UTR 18138428 18138477 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1358 chr22 HAVANA UTR 18178912 18178976 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1359 chr22 HAVANA UTR 18185009 18185152 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1360 chr22 HAVANA UTR 18209443 18211465 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000498133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-003"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316186.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1361 chr22 ENSEMBL transcript 18121507 18211465 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1362 chr22 ENSEMBL exon 18121507 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; exon_number 1; exon_id "ENSE00001412972.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1363 chr22 ENSEMBL exon 18138428 18138598 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; exon_number 2; exon_id "ENSE00003461313.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1364 chr22 ENSEMBL exon 18165980 18166087 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; exon_number 3; exon_id "ENSE00003637389.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1365 chr22 ENSEMBL exon 18178907 18178976 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; exon_number 4; exon_id "ENSE00003555903.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1366 chr22 ENSEMBL exon 18185009 18185152 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; exon_number 5; exon_id "ENSE00003600296.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1367 chr22 ENSEMBL CDS 18185039 18185152 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; exon_number 5; exon_id "ENSE00003600296.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1368 chr22 ENSEMBL start_codon 18185039 18185041 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; exon_number 5; exon_id "ENSE00003600296.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1369 chr22 ENSEMBL exon 18209443 18211465 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; exon_number 6; exon_id "ENSE00003626534.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1370 chr22 ENSEMBL CDS 18209443 18210297 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; exon_number 6; exon_id "ENSE00003626534.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1371 chr22 ENSEMBL stop_codon 18210298 18210300 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; exon_number 6; exon_id "ENSE00003626534.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1372 chr22 ENSEMBL UTR 18121507 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1373 chr22 ENSEMBL UTR 18138428 18138598 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1374 chr22 ENSEMBL UTR 18165980 18166087 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1375 chr22 ENSEMBL UTR 18178907 18178976 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1376 chr22 ENSEMBL UTR 18185009 18185038 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1377 chr22 ENSEMBL UTR 18210298 18211465 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000543133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-204"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1378 chr22 HAVANA transcript 18121523 18175161 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000464649.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BCL2L13-009"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1379 chr22 HAVANA exon 18121523 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000464649.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BCL2L13-009"; exon_number 1; exon_id "ENSE00001845131.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1380 chr22 HAVANA exon 18165980 18166087 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000464649.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BCL2L13-009"; exon_number 2; exon_id "ENSE00003637389.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1381 chr22 HAVANA exon 18171752 18171908 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000464649.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BCL2L13-009"; exon_number 3; exon_id "ENSE00003687973.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1382 chr22 HAVANA exon 18175122 18175161 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000464649.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BCL2L13-009"; exon_number 4; exon_id "ENSE00001873289.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1383 chr22 ENSEMBL transcript 18121523 18210466 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000538149.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1384 chr22 ENSEMBL exon 18121523 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000538149.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-203"; exon_number 1; exon_id "ENSE00001845131.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1385 chr22 ENSEMBL exon 18138428 18138598 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000538149.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-203"; exon_number 2; exon_id "ENSE00003461014.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1386 chr22 ENSEMBL CDS 18138515 18138598 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000538149.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-203"; exon_number 2; exon_id "ENSE00003461014.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1387 chr22 ENSEMBL start_codon 18138515 18138517 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000538149.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-203"; exon_number 2; exon_id "ENSE00003461014.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1388 chr22 ENSEMBL exon 18185009 18185152 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000538149.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-203"; exon_number 3; exon_id "ENSE00003546934.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1389 chr22 ENSEMBL CDS 18185009 18185152 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000538149.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-203"; exon_number 3; exon_id "ENSE00003546934.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1390 chr22 ENSEMBL exon 18209443 18210466 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000538149.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-203"; exon_number 4; exon_id "ENSE00002232124.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1391 chr22 ENSEMBL CDS 18209443 18210297 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000538149.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-203"; exon_number 4; exon_id "ENSE00002232124.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1392 chr22 ENSEMBL stop_codon 18210298 18210300 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000538149.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-203"; exon_number 4; exon_id "ENSE00002232124.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1393 chr22 ENSEMBL UTR 18121523 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000538149.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1394 chr22 ENSEMBL UTR 18138428 18138514 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000538149.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1395 chr22 ENSEMBL UTR 18210298 18210466 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000538149.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1396 chr22 ENSEMBL transcript 18121530 18210428 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1397 chr22 ENSEMBL exon 18121530 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; exon_number 1; exon_id "ENSE00001323953.3"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1398 chr22 ENSEMBL exon 18138428 18138598 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; exon_number 2; exon_id "ENSE00003461313.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1399 chr22 ENSEMBL exon 18165980 18166087 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; exon_number 3; exon_id "ENSE00003637389.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1400 chr22 ENSEMBL exon 18185009 18185152 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; exon_number 4; exon_id "ENSE00003600296.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1401 chr22 ENSEMBL CDS 18185039 18185152 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; exon_number 4; exon_id "ENSE00003600296.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1402 chr22 ENSEMBL start_codon 18185039 18185041 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; exon_number 4; exon_id "ENSE00003600296.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1403 chr22 ENSEMBL exon 18209443 18210428 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; exon_number 5; exon_id "ENSE00002263893.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1404 chr22 ENSEMBL CDS 18209443 18210297 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; exon_number 5; exon_id "ENSE00002263893.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1405 chr22 ENSEMBL stop_codon 18210298 18210300 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; exon_number 5; exon_id "ENSE00002263893.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1406 chr22 ENSEMBL UTR 18121530 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1407 chr22 ENSEMBL UTR 18138428 18138598 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1408 chr22 ENSEMBL UTR 18165980 18166087 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1409 chr22 ENSEMBL UTR 18185009 18185038 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1410 chr22 ENSEMBL UTR 18210298 18210428 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000337612.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS59448.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1411 chr22 HAVANA transcript 18121538 18186499 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1412 chr22 HAVANA exon 18121538 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; exon_number 1; exon_id "ENSE00001854798.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1413 chr22 HAVANA exon 18138428 18138598 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; exon_number 2; exon_id "ENSE00003647715.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1414 chr22 HAVANA CDS 18138478 18138598 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; exon_number 2; exon_id "ENSE00003647715.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1415 chr22 HAVANA start_codon 18138478 18138480 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; exon_number 2; exon_id "ENSE00003647715.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1416 chr22 HAVANA exon 18165980 18166087 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; exon_number 3; exon_id "ENSE00003693073.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1417 chr22 HAVANA CDS 18165980 18166087 . + 2 gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; exon_number 3; exon_id "ENSE00003693073.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1418 chr22 HAVANA exon 18171752 18171908 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; exon_number 4; exon_id "ENSE00003591214.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1419 chr22 HAVANA CDS 18171752 18171908 . + 2 gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; exon_number 4; exon_id "ENSE00003591214.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1420 chr22 HAVANA exon 18178907 18178976 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; exon_number 5; exon_id "ENSE00003497481.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1421 chr22 HAVANA CDS 18178907 18178976 . + 1 gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; exon_number 5; exon_id "ENSE00003497481.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1422 chr22 HAVANA exon 18185009 18186499 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; exon_number 6; exon_id "ENSE00001841813.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1423 chr22 HAVANA CDS 18185009 18185155 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; exon_number 6; exon_id "ENSE00001841813.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1424 chr22 HAVANA stop_codon 18185156 18185158 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; exon_number 6; exon_id "ENSE00001841813.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1425 chr22 HAVANA UTR 18121538 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1426 chr22 HAVANA UTR 18138428 18138477 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1427 chr22 HAVANA UTR 18185156 18186499 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000493680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-004"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316187.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1428 chr22 HAVANA transcript 18121577 18213388 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1429 chr22 HAVANA exon 18121577 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; exon_number 1; exon_id "ENSE00001832778.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1430 chr22 HAVANA exon 18138428 18138598 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; exon_number 2; exon_id "ENSE00003647715.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1431 chr22 HAVANA CDS 18138478 18138598 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; exon_number 2; exon_id "ENSE00003647715.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1432 chr22 HAVANA start_codon 18138478 18138480 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; exon_number 2; exon_id "ENSE00003647715.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1433 chr22 HAVANA exon 18165980 18166087 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; exon_number 3; exon_id "ENSE00003693073.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1434 chr22 HAVANA CDS 18165980 18166087 . + 2 gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; exon_number 3; exon_id "ENSE00003693073.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1435 chr22 HAVANA exon 18171752 18171908 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; exon_number 4; exon_id "ENSE00003591214.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1436 chr22 HAVANA CDS 18171752 18171908 . + 2 gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; exon_number 4; exon_id "ENSE00003591214.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1437 chr22 HAVANA exon 18209443 18213388 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; exon_number 5; exon_id "ENSE00001890669.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1438 chr22 HAVANA CDS 18209443 18209569 . + 1 gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; exon_number 5; exon_id "ENSE00001890669.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1439 chr22 HAVANA stop_codon 18209570 18209572 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; exon_number 5; exon_id "ENSE00001890669.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1440 chr22 HAVANA UTR 18121577 18121652 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1441 chr22 HAVANA UTR 18138428 18138477 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1442 chr22 HAVANA UTR 18209570 18213388 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000355028.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BCL2L13-005"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS59447.1"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1443 chr22 ENSEMBL transcript 18138478 18210300 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000418951.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1444 chr22 ENSEMBL exon 18138478 18138598 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000418951.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-202"; exon_number 1; exon_id "ENSE00001629201.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1445 chr22 ENSEMBL CDS 18138478 18138598 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000418951.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-202"; exon_number 1; exon_id "ENSE00001629201.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1446 chr22 ENSEMBL start_codon 18138478 18138480 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000418951.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-202"; exon_number 1; exon_id "ENSE00001629201.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1447 chr22 ENSEMBL exon 18165980 18166087 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000418951.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-202"; exon_number 2; exon_id "ENSE00003693073.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1448 chr22 ENSEMBL CDS 18165980 18166087 . + 2 gene_id "ENSG00000099968.13"; transcript_id "ENST00000418951.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-202"; exon_number 2; exon_id "ENSE00003693073.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1449 chr22 ENSEMBL exon 18167375 18167472 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000418951.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-202"; exon_number 3; exon_id "ENSE00001315528.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1450 chr22 ENSEMBL CDS 18167375 18167457 . + 2 gene_id "ENSG00000099968.13"; transcript_id "ENST00000418951.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-202"; exon_number 3; exon_id "ENSE00001315528.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1451 chr22 ENSEMBL stop_codon 18167458 18167460 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000418951.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-202"; exon_number 3; exon_id "ENSE00001315528.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1452 chr22 ENSEMBL exon 18171752 18171908 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000418951.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-202"; exon_number 4; exon_id "ENSE00003687973.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1453 chr22 ENSEMBL exon 18209443 18210300 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000418951.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-202"; exon_number 5; exon_id "ENSE00001540150.3"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1454 chr22 ENSEMBL UTR 18167458 18167472 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000418951.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1455 chr22 ENSEMBL UTR 18171752 18171908 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000418951.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1456 chr22 ENSEMBL UTR 18209443 18210300 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000418951.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCL2L13-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13746.1"; havana_gene "OTTHUMG00000150088.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1457 chr22 HAVANA transcript 18171840 18211906 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399777.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316189.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1458 chr22 HAVANA exon 18171840 18171908 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399777.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-006"; exon_number 1; exon_id "ENSE00001540161.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316189.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1459 chr22 HAVANA CDS 18171840 18171908 . + 1 gene_id "ENSG00000099968.13"; transcript_id "ENST00000399777.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-006"; exon_number 1; exon_id "ENSE00001540161.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316189.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1460 chr22 HAVANA exon 18185009 18185152 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399777.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-006"; exon_number 2; exon_id "ENSE00003526121.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316189.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1461 chr22 HAVANA CDS 18185009 18185051 . + 1 gene_id "ENSG00000099968.13"; transcript_id "ENST00000399777.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-006"; exon_number 2; exon_id "ENSE00003526121.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316189.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1462 chr22 HAVANA stop_codon 18185052 18185054 . + 0 gene_id "ENSG00000099968.13"; transcript_id "ENST00000399777.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-006"; exon_number 2; exon_id "ENSE00003526121.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316189.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1463 chr22 HAVANA exon 18209443 18211906 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399777.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-006"; exon_number 3; exon_id "ENSE00001399631.3"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316189.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1464 chr22 HAVANA UTR 18185052 18185152 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399777.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316189.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1465 chr22 HAVANA UTR 18209443 18211906 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000399777.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BCL2L13-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316189.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1466 chr22 HAVANA transcript 18178504 18185129 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000479296.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BCL2L13-010"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316193.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1467 chr22 HAVANA exon 18178504 18178976 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000479296.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BCL2L13-010"; exon_number 1; exon_id "ENSE00001926348.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316193.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1468 chr22 HAVANA exon 18185009 18185129 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000479296.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BCL2L13-010"; exon_number 2; exon_id "ENSE00001895448.1"; level 2; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316193.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1469 chr22 HAVANA transcript 18189476 18210436 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000485631.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BCL2L13-007"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1470 chr22 HAVANA exon 18189476 18189591 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000485631.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BCL2L13-007"; exon_number 1; exon_id "ENSE00001958207.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1471 chr22 HAVANA exon 18209443 18210436 . + . gene_id "ENSG00000099968.13"; transcript_id "ENST00000485631.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCL2L13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BCL2L13-007"; exon_number 2; exon_id "ENSE00001826278.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150088.3"; havana_transcript "OTTHUMT00000316190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1472 chr22 ENSEMBL gene 18124172 18124285 . - . gene_id "ENSG00000251737.1"; transcript_id "ENSG00000251737.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1473 chr22 ENSEMBL transcript 18124172 18124285 . - . gene_id "ENSG00000251737.1"; transcript_id "ENST00000515928.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.432-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1474 chr22 ENSEMBL exon 18124172 18124285 . - . gene_id "ENSG00000251737.1"; transcript_id "ENST00000515928.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.432-201"; exon_number 1; exon_id "ENSE00002088205.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1475 chr22 HAVANA gene 18216906 18257536 . - . gene_id "ENSG00000015475.14"; transcript_id "ENSG00000015475.14"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID"; level 2; tag "ncRNA_host"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1476 chr22 HAVANA transcript 18216906 18256782 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1477 chr22 HAVANA exon 18256376 18256782 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; exon_number 1; exon_id "ENSE00001349079.5"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1478 chr22 HAVANA CDS 18256376 18256455 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; exon_number 1; exon_id "ENSE00001349079.5"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1479 chr22 HAVANA start_codon 18256453 18256455 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; exon_number 1; exon_id "ENSE00001349079.5"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1480 chr22 HAVANA exon 18232871 18232940 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; exon_number 2; exon_id "ENSE00003568392.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1481 chr22 HAVANA CDS 18232871 18232940 . - 1 gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; exon_number 2; exon_id "ENSE00003568392.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1482 chr22 HAVANA exon 18226569 18226779 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; exon_number 3; exon_id "ENSE00003565087.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1483 chr22 HAVANA CDS 18226569 18226779 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; exon_number 3; exon_id "ENSE00003565087.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1484 chr22 HAVANA exon 18222115 18222254 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; exon_number 4; exon_id "ENSE00003689682.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1485 chr22 HAVANA CDS 18222115 18222254 . - 2 gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; exon_number 4; exon_id "ENSE00003689682.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1486 chr22 HAVANA exon 18220783 18220995 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; exon_number 5; exon_id "ENSE00003542752.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1487 chr22 HAVANA CDS 18220783 18220995 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; exon_number 5; exon_id "ENSE00003542752.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1488 chr22 HAVANA exon 18216906 18218357 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; exon_number 6; exon_id "ENSE00001946765.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1489 chr22 HAVANA CDS 18218349 18218357 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; exon_number 6; exon_id "ENSE00001946765.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1490 chr22 HAVANA stop_codon 18218346 18218348 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; exon_number 6; exon_id "ENSE00001946765.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1491 chr22 HAVANA UTR 18256456 18256782 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1492 chr22 HAVANA UTR 18216906 18218348 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000317361.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13747.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1493 chr22 ENSEMBL transcript 18216908 18257258 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1494 chr22 ENSEMBL exon 18257147 18257258 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; exon_number 1; exon_id "ENSE00001540140.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1495 chr22 ENSEMBL exon 18226569 18226779 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; exon_number 2; exon_id "ENSE00003489267.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1496 chr22 ENSEMBL exon 18222115 18222254 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; exon_number 3; exon_id "ENSE00003616197.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1497 chr22 ENSEMBL CDS 18222115 18222189 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; exon_number 3; exon_id "ENSE00003616197.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1498 chr22 ENSEMBL start_codon 18222187 18222189 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; exon_number 3; exon_id "ENSE00003616197.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1499 chr22 ENSEMBL exon 18220783 18220995 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; exon_number 4; exon_id "ENSE00003542752.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1500 chr22 ENSEMBL CDS 18220783 18220995 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; exon_number 4; exon_id "ENSE00003542752.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1501 chr22 ENSEMBL exon 18216908 18218357 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; exon_number 5; exon_id "ENSE00001389825.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1502 chr22 ENSEMBL CDS 18218349 18218357 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; exon_number 5; exon_id "ENSE00001389825.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1503 chr22 ENSEMBL stop_codon 18218346 18218348 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; exon_number 5; exon_id "ENSE00001389825.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1504 chr22 ENSEMBL UTR 18257147 18257258 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1505 chr22 ENSEMBL UTR 18226569 18226779 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1506 chr22 ENSEMBL UTR 18222190 18222254 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1507 chr22 ENSEMBL UTR 18216908 18218348 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1508 chr22 HAVANA transcript 18216937 18257258 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1509 chr22 HAVANA exon 18257147 18257258 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; exon_number 1; exon_id "ENSE00001540140.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1510 chr22 HAVANA exon 18232871 18232940 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; exon_number 2; exon_id "ENSE00003526724.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1511 chr22 HAVANA CDS 18232871 18232882 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; exon_number 2; exon_id "ENSE00003526724.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1512 chr22 HAVANA start_codon 18232880 18232882 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; exon_number 2; exon_id "ENSE00003526724.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1513 chr22 HAVANA exon 18226569 18226779 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; exon_number 3; exon_id "ENSE00003565087.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1514 chr22 HAVANA CDS 18226569 18226779 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; exon_number 3; exon_id "ENSE00003565087.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1515 chr22 HAVANA exon 18222115 18222254 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; exon_number 4; exon_id "ENSE00003689682.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1516 chr22 HAVANA CDS 18222115 18222254 . - 2 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; exon_number 4; exon_id "ENSE00003689682.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1517 chr22 HAVANA exon 18220783 18220995 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; exon_number 5; exon_id "ENSE00003542752.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1518 chr22 HAVANA CDS 18220783 18220995 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; exon_number 5; exon_id "ENSE00003542752.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1519 chr22 HAVANA exon 18216937 18218357 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; exon_number 6; exon_id "ENSE00001856820.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1520 chr22 HAVANA CDS 18218349 18218357 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; exon_number 6; exon_id "ENSE00001856820.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1521 chr22 HAVANA stop_codon 18218346 18218348 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; exon_number 6; exon_id "ENSE00001856820.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1522 chr22 HAVANA UTR 18257147 18257258 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1523 chr22 HAVANA UTR 18232883 18232940 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1524 chr22 HAVANA UTR 18216937 18218348 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399774.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1525 chr22 HAVANA transcript 18216941 18257255 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399765.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1526 chr22 HAVANA exon 18257147 18257255 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399765.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-004"; exon_number 1; exon_id "ENSE00001540096.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1527 chr22 HAVANA exon 18222115 18222254 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399765.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-004"; exon_number 2; exon_id "ENSE00003616197.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1528 chr22 HAVANA CDS 18222115 18222189 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399765.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-004"; exon_number 2; exon_id "ENSE00003616197.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1529 chr22 HAVANA start_codon 18222187 18222189 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399765.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-004"; exon_number 2; exon_id "ENSE00003616197.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1530 chr22 HAVANA exon 18220783 18220995 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399765.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-004"; exon_number 3; exon_id "ENSE00003542752.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1531 chr22 HAVANA CDS 18220783 18220995 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399765.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-004"; exon_number 3; exon_id "ENSE00003542752.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1532 chr22 HAVANA exon 18216941 18218357 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399765.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-004"; exon_number 4; exon_id "ENSE00001540093.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1533 chr22 HAVANA CDS 18218349 18218357 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399765.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-004"; exon_number 4; exon_id "ENSE00001540093.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1534 chr22 HAVANA stop_codon 18218346 18218348 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000399765.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-004"; exon_number 4; exon_id "ENSE00001540093.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1535 chr22 HAVANA UTR 18257147 18257255 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399765.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1536 chr22 HAVANA UTR 18222190 18222254 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399765.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1537 chr22 HAVANA UTR 18216941 18218348 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000399765.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13749.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1538 chr22 HAVANA transcript 18217988 18223960 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000494097.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BID-005"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316182.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1539 chr22 HAVANA exon 18222115 18223960 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000494097.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BID-005"; exon_number 1; exon_id "ENSE00001855408.1"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316182.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1540 chr22 HAVANA exon 18220783 18220995 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000494097.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BID-005"; exon_number 2; exon_id "ENSE00003683851.1"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316182.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1541 chr22 HAVANA exon 18217988 18218357 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000494097.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BID-005"; exon_number 3; exon_id "ENSE00001892438.1"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316182.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1542 chr22 HAVANA transcript 18218265 18257178 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1543 chr22 HAVANA exon 18257147 18257178 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; exon_number 1; exon_id "ENSE00002195037.1"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1544 chr22 HAVANA exon 18232871 18232940 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; exon_number 2; exon_id "ENSE00003526724.1"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1545 chr22 HAVANA CDS 18232871 18232882 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; exon_number 2; exon_id "ENSE00003526724.1"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1546 chr22 HAVANA start_codon 18232880 18232882 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; exon_number 2; exon_id "ENSE00003526724.1"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1547 chr22 HAVANA exon 18226569 18226779 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; exon_number 3; exon_id "ENSE00003565087.1"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1548 chr22 HAVANA CDS 18226569 18226779 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; exon_number 3; exon_id "ENSE00003565087.1"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1549 chr22 HAVANA exon 18222848 18222942 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; exon_number 4; exon_id "ENSE00001374791.1"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1550 chr22 HAVANA CDS 18222848 18222942 . - 2 gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; exon_number 4; exon_id "ENSE00001374791.1"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1551 chr22 HAVANA exon 18222115 18222254 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; exon_number 5; exon_id "ENSE00003668564.1"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1552 chr22 HAVANA CDS 18222162 18222254 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; exon_number 5; exon_id "ENSE00003668564.1"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1553 chr22 HAVANA stop_codon 18222159 18222161 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; exon_number 5; exon_id "ENSE00003668564.1"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1554 chr22 HAVANA exon 18220783 18220995 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; exon_number 6; exon_id "ENSE00003683851.1"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1555 chr22 HAVANA exon 18218265 18218357 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; exon_number 7; exon_id "ENSE00001428765.1"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1556 chr22 HAVANA UTR 18257147 18257178 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1557 chr22 HAVANA UTR 18232883 18232940 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1558 chr22 HAVANA UTR 18222115 18222161 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1559 chr22 HAVANA UTR 18220783 18220995 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1560 chr22 HAVANA UTR 18218265 18218357 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000342111.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-003"; level 2; tag "NMD_exception"; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316180.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1561 chr22 HAVANA transcript 18218318 18257178 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000550946.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BID-011"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1562 chr22 HAVANA exon 18257147 18257178 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000550946.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BID-011"; exon_number 1; exon_id "ENSE00002195037.1"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1563 chr22 HAVANA exon 18232871 18232940 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000550946.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BID-011"; exon_number 2; exon_id "ENSE00003590401.1"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1564 chr22 HAVANA exon 18226569 18226779 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000550946.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BID-011"; exon_number 3; exon_id "ENSE00003489267.1"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1565 chr22 HAVANA exon 18222115 18222942 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000550946.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BID-011"; exon_number 4; exon_id "ENSE00002394631.1"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1566 chr22 HAVANA exon 18220783 18220995 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000550946.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BID-011"; exon_number 5; exon_id "ENSE00003683851.1"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1567 chr22 HAVANA exon 18218318 18218357 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000550946.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BID-011"; exon_number 6; exon_id "ENSE00003539371.1"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1568 chr22 HAVANA transcript 18218318 18257431 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1569 chr22 HAVANA exon 18257406 18257431 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; exon_number 1; exon_id "ENSE00002343949.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1570 chr22 HAVANA exon 18232871 18232940 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; exon_number 2; exon_id "ENSE00003526724.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1571 chr22 HAVANA CDS 18232871 18232882 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; exon_number 2; exon_id "ENSE00003526724.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1572 chr22 HAVANA start_codon 18232880 18232882 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; exon_number 2; exon_id "ENSE00003526724.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1573 chr22 HAVANA exon 18226569 18226779 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; exon_number 3; exon_id "ENSE00003565087.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1574 chr22 HAVANA CDS 18226569 18226779 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; exon_number 3; exon_id "ENSE00003565087.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1575 chr22 HAVANA exon 18222115 18222254 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; exon_number 4; exon_id "ENSE00003689682.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1576 chr22 HAVANA CDS 18222115 18222254 . - 2 gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; exon_number 4; exon_id "ENSE00003689682.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1577 chr22 HAVANA exon 18220783 18220995 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; exon_number 5; exon_id "ENSE00003542752.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1578 chr22 HAVANA CDS 18220783 18220995 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; exon_number 5; exon_id "ENSE00003542752.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1579 chr22 HAVANA exon 18218318 18218357 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; exon_number 6; exon_id "ENSE00003487532.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1580 chr22 HAVANA CDS 18218349 18218357 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; exon_number 6; exon_id "ENSE00003487532.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1581 chr22 HAVANA stop_codon 18218346 18218348 . - 0 gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; exon_number 6; exon_id "ENSE00003487532.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1582 chr22 HAVANA UTR 18257406 18257431 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1583 chr22 HAVANA UTR 18232883 18232940 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1584 chr22 HAVANA UTR 18218318 18218348 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000551952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BID-009"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13748.1"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1585 chr22 HAVANA transcript 18220824 18257261 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000473439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BID-006"; level 2; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316183.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1586 chr22 HAVANA exon 18257147 18257261 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000473439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BID-006"; exon_number 1; exon_id "ENSE00001917930.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316183.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1587 chr22 HAVANA exon 18226569 18226779 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000473439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BID-006"; exon_number 2; exon_id "ENSE00003489267.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316183.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1588 chr22 HAVANA exon 18222115 18222254 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000473439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BID-006"; exon_number 3; exon_id "ENSE00003500448.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316183.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1589 chr22 HAVANA exon 18220824 18220995 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000473439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BID-006"; exon_number 4; exon_id "ENSE00001877316.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000316183.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1590 chr22 HAVANA transcript 18222214 18257536 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000552886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BID-008"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1591 chr22 HAVANA exon 18257459 18257536 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000552886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BID-008"; exon_number 1; exon_id "ENSE00002385433.1"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1592 chr22 HAVANA exon 18226569 18226779 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000552886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BID-008"; exon_number 2; exon_id "ENSE00003489267.1"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1593 chr22 HAVANA exon 18222214 18222254 . - . gene_id "ENSG00000015475.14"; transcript_id "ENST00000552886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BID"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BID-008"; exon_number 3; exon_id "ENSE00002342528.1"; level 2; havana_gene "OTTHUMG00000150087.4"; havana_transcript "OTTHUMT00000404248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1594 chr22 ENSEMBL gene 18246946 18247025 . - . gene_id "ENSG00000264757.1"; transcript_id "ENSG00000264757.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR3198-1"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR3198-1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1595 chr22 ENSEMBL transcript 18246946 18247025 . - . gene_id "ENSG00000264757.1"; transcript_id "ENST00000583102.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR3198-1"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR3198-1-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1596 chr22 ENSEMBL exon 18246946 18247025 . - . gene_id "ENSG00000264757.1"; transcript_id "ENST00000583102.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR3198-1"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR3198-1-201"; exon_number 1; exon_id "ENSE00002734587.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1597 chr22 HAVANA gene 18260088 18262247 . + . gene_id "ENSG00000269220.1"; transcript_id "ENSG00000269220.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LINC00528"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LINC00528"; level 2; havana_gene "OTTHUMG00000186097.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1598 chr22 HAVANA transcript 18260088 18262247 . + . gene_id "ENSG00000269220.1"; transcript_id "ENST00000600723.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LINC00528"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LINC00528-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186097.1"; havana_transcript "OTTHUMT00000472248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1599 chr22 HAVANA exon 18260088 18262247 . + . gene_id "ENSG00000269220.1"; transcript_id "ENST00000600723.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LINC00528"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LINC00528-001"; exon_number 1; exon_id "ENSE00003141552.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186097.1"; havana_transcript "OTTHUMT00000472248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1600 chr22 HAVANA gene 18270415 18507325 . - . gene_id "ENSG00000243156.3"; transcript_id "ENSG00000243156.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3"; level 1; tag "ncRNA_host"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1601 chr22 HAVANA transcript 18270415 18507325 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1602 chr22 HAVANA exon 18507047 18507325 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 1; exon_id "ENSE00002719648.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1603 chr22 HAVANA exon 18389315 18389652 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 2; exon_id "ENSE00002704788.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1604 chr22 HAVANA CDS 18389315 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 2; exon_id "ENSE00002704788.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1605 chr22 HAVANA start_codon 18389576 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 2; exon_id "ENSE00002704788.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1606 chr22 HAVANA exon 18387398 18387605 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 3; exon_id "ENSE00002698801.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1607 chr22 HAVANA CDS 18387398 18387605 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 3; exon_id "ENSE00002698801.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1608 chr22 HAVANA exon 18385397 18385513 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 4; exon_id "ENSE00002693380.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1609 chr22 HAVANA CDS 18385397 18385513 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 4; exon_id "ENSE00002693380.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1610 chr22 HAVANA exon 18384644 18384745 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 5; exon_id "ENSE00002726542.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1611 chr22 HAVANA CDS 18384644 18384745 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 5; exon_id "ENSE00002726542.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1612 chr22 HAVANA exon 18383608 18383763 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 6; exon_id "ENSE00002688992.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1613 chr22 HAVANA CDS 18383608 18383763 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 6; exon_id "ENSE00002688992.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1614 chr22 HAVANA exon 18382214 18382314 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 7; exon_id "ENSE00002707115.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1615 chr22 HAVANA CDS 18382214 18382314 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 7; exon_id "ENSE00002707115.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1616 chr22 HAVANA exon 18379490 18379747 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 8; exon_id "ENSE00003480785.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1617 chr22 HAVANA CDS 18379490 18379747 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 8; exon_id "ENSE00003480785.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1618 chr22 HAVANA exon 18379012 18379127 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 9; exon_id "ENSE00003653418.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1619 chr22 HAVANA CDS 18379012 18379127 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 9; exon_id "ENSE00003653418.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1620 chr22 HAVANA exon 18378050 18378176 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 10; exon_id "ENSE00003676893.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1621 chr22 HAVANA CDS 18378050 18378176 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 10; exon_id "ENSE00003676893.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1622 chr22 HAVANA exon 18376574 18376670 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 11; exon_id "ENSE00003580828.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1623 chr22 HAVANA CDS 18376574 18376670 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 11; exon_id "ENSE00003580828.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1624 chr22 HAVANA exon 18374251 18374398 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 12; exon_id "ENSE00003609414.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1625 chr22 HAVANA CDS 18374251 18374398 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 12; exon_id "ENSE00003609414.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1626 chr22 HAVANA exon 18371800 18371996 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 13; exon_id "ENSE00003461380.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1627 chr22 HAVANA CDS 18371800 18371996 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 13; exon_id "ENSE00003461380.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1628 chr22 HAVANA exon 18370089 18370201 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 14; exon_id "ENSE00003634930.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1629 chr22 HAVANA CDS 18370089 18370201 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 14; exon_id "ENSE00003634930.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1630 chr22 HAVANA exon 18369936 18369998 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 15; exon_id "ENSE00003493513.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1631 chr22 HAVANA CDS 18369936 18369998 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 15; exon_id "ENSE00003493513.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1632 chr22 HAVANA exon 18368644 18368817 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 16; exon_id "ENSE00003482929.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1633 chr22 HAVANA CDS 18368644 18368817 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 16; exon_id "ENSE00003482929.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1634 chr22 HAVANA exon 18354603 18354789 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 17; exon_id "ENSE00003545912.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1635 chr22 HAVANA CDS 18354603 18354789 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 17; exon_id "ENSE00003545912.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1636 chr22 HAVANA exon 18348690 18348778 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 18; exon_id "ENSE00003607110.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1637 chr22 HAVANA CDS 18348690 18348778 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 18; exon_id "ENSE00003607110.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1638 chr22 HAVANA exon 18347665 18347752 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 19; exon_id "ENSE00003592365.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1639 chr22 HAVANA CDS 18347665 18347752 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 19; exon_id "ENSE00003592365.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1640 chr22 HAVANA exon 18324588 18324783 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 20; exon_id "ENSE00002708003.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1641 chr22 HAVANA CDS 18324588 18324783 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 20; exon_id "ENSE00002708003.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1642 chr22 HAVANA exon 18314620 18314873 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 21; exon_id "ENSE00001558014.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1643 chr22 HAVANA CDS 18314620 18314873 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 21; exon_id "ENSE00001558014.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1644 chr22 HAVANA exon 18310410 18310547 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 22; exon_id "ENSE00000879027.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1645 chr22 HAVANA CDS 18310410 18310547 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 22; exon_id "ENSE00000879027.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1646 chr22 HAVANA exon 18305713 18305826 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 23; exon_id "ENSE00000650394.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1647 chr22 HAVANA CDS 18305713 18305826 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 23; exon_id "ENSE00000650394.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1648 chr22 HAVANA exon 18304796 18304936 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 24; exon_id "ENSE00000650392.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1649 chr22 HAVANA CDS 18304796 18304936 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 24; exon_id "ENSE00000650392.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1650 chr22 HAVANA exon 18304193 18304275 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 25; exon_id "ENSE00000650390.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1651 chr22 HAVANA CDS 18304193 18304275 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 25; exon_id "ENSE00000650390.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1652 chr22 HAVANA exon 18300077 18301895 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 26; exon_id "ENSE00000650388.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1653 chr22 HAVANA CDS 18300077 18301895 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 26; exon_id "ENSE00000650388.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1654 chr22 HAVANA exon 18299456 18299550 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 27; exon_id "ENSE00000650386.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1655 chr22 HAVANA CDS 18299456 18299550 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 27; exon_id "ENSE00000650386.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1656 chr22 HAVANA exon 18293469 18293579 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 28; exon_id "ENSE00003601483.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1657 chr22 HAVANA CDS 18293469 18293579 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 28; exon_id "ENSE00003601483.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1658 chr22 HAVANA exon 18291610 18291703 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 29; exon_id "ENSE00003527655.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1659 chr22 HAVANA CDS 18291610 18291703 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 29; exon_id "ENSE00003527655.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1660 chr22 HAVANA exon 18273968 18274067 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 30; exon_id "ENSE00003612983.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1661 chr22 HAVANA CDS 18273968 18274067 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 30; exon_id "ENSE00003612983.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1662 chr22 HAVANA exon 18273764 18273837 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 31; exon_id "ENSE00003529728.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1663 chr22 HAVANA CDS 18273764 18273837 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 31; exon_id "ENSE00003529728.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1664 chr22 HAVANA exon 18270415 18273682 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 32; exon_id "ENSE00002707212.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1665 chr22 HAVANA CDS 18273501 18273682 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 32; exon_id "ENSE00002707212.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1666 chr22 HAVANA stop_codon 18273498 18273500 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; exon_number 32; exon_id "ENSE00002707212.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1667 chr22 HAVANA UTR 18507047 18507325 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1668 chr22 HAVANA UTR 18389579 18389652 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1669 chr22 HAVANA UTR 18270415 18273500 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000441493.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-010"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46659.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447351.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1670 chr22 HAVANA transcript 18273306 18274433 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000252134.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MICAL3-014"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447352.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1671 chr22 HAVANA exon 18273968 18274433 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000252134.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MICAL3-014"; exon_number 1; exon_id "ENSE00002717540.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447352.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1672 chr22 HAVANA exon 18273764 18273837 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000252134.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MICAL3-014"; exon_number 2; exon_id "ENSE00003660234.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447352.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1673 chr22 HAVANA exon 18273306 18273682 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000252134.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MICAL3-014"; exon_number 3; exon_id "ENSE00002729186.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447352.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1674 chr22 HAVANA transcript 18273603 18298435 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000580469.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MICAL3-013"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447353.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1675 chr22 HAVANA exon 18295273 18298435 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000580469.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MICAL3-013"; exon_number 1; exon_id "ENSE00002729146.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447353.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1676 chr22 HAVANA exon 18293469 18293579 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000580469.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MICAL3-013"; exon_number 2; exon_id "ENSE00003459684.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447353.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1677 chr22 HAVANA exon 18291610 18291703 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000580469.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MICAL3-013"; exon_number 3; exon_id "ENSE00003556074.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447353.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1678 chr22 HAVANA exon 18273968 18274067 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000580469.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MICAL3-013"; exon_number 4; exon_id "ENSE00003679867.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447353.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1679 chr22 HAVANA exon 18273764 18273837 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000580469.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MICAL3-013"; exon_number 5; exon_id "ENSE00003660234.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447353.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1680 chr22 HAVANA exon 18273603 18273682 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000580469.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MICAL3-013"; exon_number 6; exon_id "ENSE00002701979.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447353.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1681 chr22 HAVANA transcript 18273712 18300255 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1682 chr22 HAVANA exon 18300077 18300255 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 1; exon_id "ENSE00002712531.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1683 chr22 HAVANA CDS 18300077 18300255 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 1; exon_id "ENSE00002712531.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1684 chr22 HAVANA exon 18299456 18299550 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 2; exon_id "ENSE00000650386.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1685 chr22 HAVANA CDS 18299456 18299550 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 2; exon_id "ENSE00000650386.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1686 chr22 HAVANA exon 18295273 18295323 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 3; exon_id "ENSE00002719872.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1687 chr22 HAVANA CDS 18295273 18295323 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 3; exon_id "ENSE00002719872.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1688 chr22 HAVANA exon 18293469 18293579 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 4; exon_id "ENSE00003601483.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1689 chr22 HAVANA CDS 18293469 18293579 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 4; exon_id "ENSE00003601483.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1690 chr22 HAVANA exon 18291610 18291703 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 5; exon_id "ENSE00003527655.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1691 chr22 HAVANA CDS 18291610 18291703 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 5; exon_id "ENSE00003527655.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1692 chr22 HAVANA exon 18286577 18286627 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 6; exon_id "ENSE00002711679.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1693 chr22 HAVANA CDS 18286577 18286627 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 6; exon_id "ENSE00002711679.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1694 chr22 HAVANA exon 18273968 18274067 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 7; exon_id "ENSE00003612983.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1695 chr22 HAVANA CDS 18273968 18274067 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 7; exon_id "ENSE00003612983.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1696 chr22 HAVANA exon 18273712 18273837 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 8; exon_id "ENSE00002697741.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1697 chr22 HAVANA CDS 18273712 18273837 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000577821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-015"; exon_number 8; exon_id "ENSE00002697741.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447354.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1698 chr22 HAVANA transcript 18274030 18300191 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000579997.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-019"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447355.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1699 chr22 HAVANA exon 18300077 18300191 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000579997.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-019"; exon_number 1; exon_id "ENSE00002711908.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447355.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1700 chr22 HAVANA CDS 18300077 18300191 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000579997.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-019"; exon_number 1; exon_id "ENSE00002711908.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447355.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1701 chr22 HAVANA exon 18299456 18299550 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000579997.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-019"; exon_number 2; exon_id "ENSE00000650386.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447355.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1702 chr22 HAVANA CDS 18299456 18299550 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000579997.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-019"; exon_number 2; exon_id "ENSE00000650386.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447355.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1703 chr22 HAVANA exon 18293469 18293579 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000579997.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-019"; exon_number 3; exon_id "ENSE00003601483.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447355.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1704 chr22 HAVANA CDS 18293469 18293579 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000579997.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-019"; exon_number 3; exon_id "ENSE00003601483.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447355.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1705 chr22 HAVANA exon 18291610 18291703 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000579997.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-019"; exon_number 4; exon_id "ENSE00003527655.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447355.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1706 chr22 HAVANA CDS 18291610 18291703 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000579997.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-019"; exon_number 4; exon_id "ENSE00003527655.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447355.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1707 chr22 HAVANA exon 18276495 18276560 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000579997.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-019"; exon_number 5; exon_id "ENSE00002687043.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447355.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1708 chr22 HAVANA CDS 18276495 18276560 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000579997.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-019"; exon_number 5; exon_id "ENSE00002687043.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447355.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1709 chr22 HAVANA exon 18274030 18274067 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000579997.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-019"; exon_number 6; exon_id "ENSE00002685748.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447355.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1710 chr22 HAVANA CDS 18274030 18274067 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000579997.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-019"; exon_number 6; exon_id "ENSE00002685748.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447355.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1711 chr22 HAVANA transcript 18286320 18293502 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000584751.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-018"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447356.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1712 chr22 HAVANA exon 18293469 18293502 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000584751.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-018"; exon_number 1; exon_id "ENSE00002716893.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447356.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1713 chr22 HAVANA CDS 18293469 18293502 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000584751.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-018"; exon_number 1; exon_id "ENSE00002716893.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447356.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1714 chr22 HAVANA exon 18291610 18291703 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000584751.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-018"; exon_number 2; exon_id "ENSE00003527655.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447356.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1715 chr22 HAVANA CDS 18291610 18291703 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000584751.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-018"; exon_number 2; exon_id "ENSE00003527655.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447356.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1716 chr22 HAVANA exon 18286320 18286627 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000584751.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-018"; exon_number 3; exon_id "ENSE00002734495.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447356.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1717 chr22 HAVANA CDS 18286341 18286627 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000584751.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-018"; exon_number 3; exon_id "ENSE00002734495.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447356.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1718 chr22 HAVANA stop_codon 18286338 18286340 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000584751.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-018"; exon_number 3; exon_id "ENSE00002734495.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447356.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1719 chr22 HAVANA UTR 18286320 18286340 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000584751.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-018"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447356.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1720 chr22 HAVANA transcript 18301788 18314766 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000498573.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-011"; level 1; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1721 chr22 HAVANA exon 18314620 18314766 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000498573.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-011"; exon_number 1; exon_id "ENSE00001831738.1"; level 1; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1722 chr22 HAVANA CDS 18314620 18314766 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000498573.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-011"; exon_number 1; exon_id "ENSE00001831738.1"; level 1; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1723 chr22 HAVANA exon 18305713 18305826 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000498573.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-011"; exon_number 2; exon_id "ENSE00000650394.1"; level 1; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1724 chr22 HAVANA CDS 18305713 18305826 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000498573.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-011"; exon_number 2; exon_id "ENSE00000650394.1"; level 1; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1725 chr22 HAVANA exon 18304796 18304936 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000498573.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-011"; exon_number 3; exon_id "ENSE00000650392.1"; level 1; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1726 chr22 HAVANA CDS 18304796 18304936 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000498573.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-011"; exon_number 3; exon_id "ENSE00000650392.1"; level 1; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1727 chr22 HAVANA exon 18304193 18304275 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000498573.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-011"; exon_number 4; exon_id "ENSE00000650390.1"; level 1; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1728 chr22 HAVANA CDS 18304193 18304275 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000498573.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-011"; exon_number 4; exon_id "ENSE00000650390.1"; level 1; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1729 chr22 HAVANA exon 18301788 18301895 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000498573.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-011"; exon_number 5; exon_id "ENSE00001922675.1"; level 1; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1730 chr22 HAVANA CDS 18301788 18301895 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000498573.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-011"; exon_number 5; exon_id "ENSE00001922675.1"; level 1; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1731 chr22 HAVANA transcript 18301802 18314693 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000578984.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-017"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447357.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1732 chr22 HAVANA exon 18314620 18314693 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000578984.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-017"; exon_number 1; exon_id "ENSE00001510482.2"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447357.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1733 chr22 HAVANA CDS 18314620 18314693 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000578984.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-017"; exon_number 1; exon_id "ENSE00001510482.2"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447357.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1734 chr22 HAVANA exon 18309220 18309282 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000578984.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-017"; exon_number 2; exon_id "ENSE00002722553.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447357.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1735 chr22 HAVANA CDS 18309220 18309282 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000578984.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-017"; exon_number 2; exon_id "ENSE00002722553.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447357.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1736 chr22 HAVANA exon 18305713 18305826 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000578984.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-017"; exon_number 3; exon_id "ENSE00000650394.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447357.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1737 chr22 HAVANA CDS 18305713 18305826 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000578984.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-017"; exon_number 3; exon_id "ENSE00000650394.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447357.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1738 chr22 HAVANA exon 18304796 18304936 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000578984.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-017"; exon_number 4; exon_id "ENSE00000650392.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447357.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1739 chr22 HAVANA CDS 18304796 18304936 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000578984.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-017"; exon_number 4; exon_id "ENSE00000650392.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447357.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1740 chr22 HAVANA exon 18304193 18304275 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000578984.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-017"; exon_number 5; exon_id "ENSE00000650390.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447357.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1741 chr22 HAVANA CDS 18304193 18304275 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000578984.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-017"; exon_number 5; exon_id "ENSE00000650390.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447357.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1742 chr22 HAVANA exon 18301802 18301895 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000578984.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-017"; exon_number 6; exon_id "ENSE00002721720.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447357.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1743 chr22 HAVANA CDS 18301802 18301895 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000578984.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MICAL3-017"; exon_number 6; exon_id "ENSE00002721720.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447357.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1744 chr22 HAVANA transcript 18317094 18389601 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1745 chr22 HAVANA exon 18389315 18389601 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 1; exon_id "ENSE00001543520.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1746 chr22 HAVANA CDS 18389315 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 1; exon_id "ENSE00001543520.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1747 chr22 HAVANA start_codon 18389576 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 1; exon_id "ENSE00001543520.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1748 chr22 HAVANA exon 18387398 18387605 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 2; exon_id "ENSE00002698801.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1749 chr22 HAVANA CDS 18387398 18387605 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 2; exon_id "ENSE00002698801.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1750 chr22 HAVANA exon 18385397 18385513 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 3; exon_id "ENSE00002693380.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1751 chr22 HAVANA CDS 18385397 18385513 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 3; exon_id "ENSE00002693380.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1752 chr22 HAVANA exon 18384644 18384745 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 4; exon_id "ENSE00002726542.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1753 chr22 HAVANA CDS 18384644 18384745 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 4; exon_id "ENSE00002726542.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1754 chr22 HAVANA exon 18383608 18383763 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 5; exon_id "ENSE00002688992.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1755 chr22 HAVANA CDS 18383608 18383763 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 5; exon_id "ENSE00002688992.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1756 chr22 HAVANA exon 18382214 18382314 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 6; exon_id "ENSE00002707115.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1757 chr22 HAVANA CDS 18382214 18382314 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 6; exon_id "ENSE00002707115.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1758 chr22 HAVANA exon 18379490 18379747 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 7; exon_id "ENSE00003480785.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1759 chr22 HAVANA CDS 18379490 18379747 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 7; exon_id "ENSE00003480785.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1760 chr22 HAVANA exon 18379012 18379127 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 8; exon_id "ENSE00003653418.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1761 chr22 HAVANA CDS 18379012 18379127 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 8; exon_id "ENSE00003653418.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1762 chr22 HAVANA exon 18378050 18378176 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 9; exon_id "ENSE00003676893.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1763 chr22 HAVANA CDS 18378050 18378176 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 9; exon_id "ENSE00003676893.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1764 chr22 HAVANA exon 18376574 18376670 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 10; exon_id "ENSE00003580828.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1765 chr22 HAVANA CDS 18376574 18376670 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 10; exon_id "ENSE00003580828.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1766 chr22 HAVANA exon 18374251 18374398 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 11; exon_id "ENSE00003609414.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1767 chr22 HAVANA CDS 18374251 18374398 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 11; exon_id "ENSE00003609414.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1768 chr22 HAVANA exon 18371800 18371996 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 12; exon_id "ENSE00003461380.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1769 chr22 HAVANA CDS 18371800 18371996 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 12; exon_id "ENSE00003461380.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1770 chr22 HAVANA exon 18370089 18370201 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 13; exon_id "ENSE00003634930.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1771 chr22 HAVANA CDS 18370089 18370201 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 13; exon_id "ENSE00003634930.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1772 chr22 HAVANA exon 18369936 18369998 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 14; exon_id "ENSE00003493513.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1773 chr22 HAVANA CDS 18369936 18369998 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 14; exon_id "ENSE00003493513.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1774 chr22 HAVANA exon 18368644 18368817 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 15; exon_id "ENSE00003482929.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1775 chr22 HAVANA CDS 18368644 18368817 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 15; exon_id "ENSE00003482929.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1776 chr22 HAVANA exon 18354603 18354789 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 16; exon_id "ENSE00003545912.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1777 chr22 HAVANA CDS 18354603 18354789 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 16; exon_id "ENSE00003545912.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1778 chr22 HAVANA exon 18348690 18348778 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 17; exon_id "ENSE00003607110.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1779 chr22 HAVANA CDS 18348690 18348778 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 17; exon_id "ENSE00003607110.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1780 chr22 HAVANA exon 18347665 18347752 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 18; exon_id "ENSE00003592365.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1781 chr22 HAVANA CDS 18347665 18347752 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 18; exon_id "ENSE00003592365.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
1782 chr22 HAVANA exon 18324588 18324783 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 19; exon_id "ENSE00002708003.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
1783 chr22 HAVANA CDS 18324588 18324783 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 19; exon_id "ENSE00002708003.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1784 chr22 HAVANA exon 18317094 18317315 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 20; exon_id "ENSE00001712680.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1785 chr22 HAVANA CDS 18317219 18317315 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 20; exon_id "ENSE00001712680.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1786 chr22 HAVANA stop_codon 18317216 18317218 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; exon_number 20; exon_id "ENSE00001712680.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1787 chr22 HAVANA UTR 18389579 18389601 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1788 chr22 HAVANA UTR 18317094 18317218 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000400561.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1789 chr22 ENSEMBL transcript 18317104 18507325 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1790 chr22 ENSEMBL exon 18507047 18507325 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 1; exon_id "ENSE00002719648.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1791 chr22 ENSEMBL exon 18389315 18389652 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 2; exon_id "ENSE00002704788.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1792 chr22 ENSEMBL CDS 18389315 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 2; exon_id "ENSE00002704788.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1793 chr22 ENSEMBL start_codon 18389576 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 2; exon_id "ENSE00002704788.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1794 chr22 ENSEMBL exon 18387398 18387605 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 3; exon_id "ENSE00002698801.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1795 chr22 ENSEMBL CDS 18387398 18387605 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 3; exon_id "ENSE00002698801.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1796 chr22 ENSEMBL exon 18385397 18385513 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 4; exon_id "ENSE00002693380.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1797 chr22 ENSEMBL CDS 18385397 18385513 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 4; exon_id "ENSE00002693380.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1798 chr22 ENSEMBL exon 18384644 18384745 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 5; exon_id "ENSE00002726542.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1799 chr22 ENSEMBL CDS 18384644 18384745 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 5; exon_id "ENSE00002726542.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1800 chr22 ENSEMBL exon 18383608 18383763 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 6; exon_id "ENSE00002688992.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1801 chr22 ENSEMBL CDS 18383608 18383763 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 6; exon_id "ENSE00002688992.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1802 chr22 ENSEMBL exon 18382214 18382314 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 7; exon_id "ENSE00002707115.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1803 chr22 ENSEMBL CDS 18382214 18382314 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 7; exon_id "ENSE00002707115.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1804 chr22 ENSEMBL exon 18379490 18379747 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 8; exon_id "ENSE00003480785.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1805 chr22 ENSEMBL CDS 18379490 18379747 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 8; exon_id "ENSE00003480785.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1806 chr22 ENSEMBL exon 18379012 18379127 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 9; exon_id "ENSE00003653418.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1807 chr22 ENSEMBL CDS 18379012 18379127 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 9; exon_id "ENSE00003653418.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1808 chr22 ENSEMBL exon 18378050 18378176 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 10; exon_id "ENSE00003676893.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1809 chr22 ENSEMBL CDS 18378050 18378176 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 10; exon_id "ENSE00003676893.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1810 chr22 ENSEMBL exon 18376574 18376670 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 11; exon_id "ENSE00003580828.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1811 chr22 ENSEMBL CDS 18376574 18376670 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 11; exon_id "ENSE00003580828.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1812 chr22 ENSEMBL exon 18374251 18374398 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 12; exon_id "ENSE00003609414.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1813 chr22 ENSEMBL CDS 18374251 18374398 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 12; exon_id "ENSE00003609414.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1814 chr22 ENSEMBL exon 18371800 18371996 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 13; exon_id "ENSE00003461380.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1815 chr22 ENSEMBL CDS 18371800 18371996 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 13; exon_id "ENSE00003461380.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1816 chr22 ENSEMBL exon 18370089 18370201 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 14; exon_id "ENSE00003634930.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1817 chr22 ENSEMBL CDS 18370089 18370201 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 14; exon_id "ENSE00003634930.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1818 chr22 ENSEMBL exon 18369936 18369998 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 15; exon_id "ENSE00003493513.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1819 chr22 ENSEMBL CDS 18369936 18369998 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 15; exon_id "ENSE00003493513.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1820 chr22 ENSEMBL exon 18368644 18368817 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 16; exon_id "ENSE00003482929.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1821 chr22 ENSEMBL CDS 18368644 18368817 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 16; exon_id "ENSE00003482929.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1822 chr22 ENSEMBL exon 18354603 18354789 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 17; exon_id "ENSE00003545912.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1823 chr22 ENSEMBL CDS 18354603 18354789 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 17; exon_id "ENSE00003545912.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1824 chr22 ENSEMBL exon 18348690 18348778 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 18; exon_id "ENSE00003607110.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1825 chr22 ENSEMBL CDS 18348690 18348778 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 18; exon_id "ENSE00003607110.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1826 chr22 ENSEMBL exon 18347665 18347752 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 19; exon_id "ENSE00003592365.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1827 chr22 ENSEMBL CDS 18347665 18347752 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 19; exon_id "ENSE00003592365.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1828 chr22 ENSEMBL exon 18324588 18324783 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 20; exon_id "ENSE00002708003.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1829 chr22 ENSEMBL CDS 18324588 18324783 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 20; exon_id "ENSE00002708003.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1830 chr22 ENSEMBL exon 18317104 18317315 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 21; exon_id "ENSE00001543490.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1831 chr22 ENSEMBL CDS 18317219 18317315 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 21; exon_id "ENSE00001543490.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1832 chr22 ENSEMBL stop_codon 18317216 18317218 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; exon_number 21; exon_id "ENSE00001543490.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1833 chr22 ENSEMBL UTR 18507047 18507325 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1834 chr22 ENSEMBL UTR 18389579 18389652 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1835 chr22 ENSEMBL UTR 18317104 18317218 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000444520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-203"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46660.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1836 chr22 HAVANA transcript 18322358 18484267 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1837 chr22 HAVANA exon 18484159 18484267 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 1; exon_id "ENSE00001816011.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1838 chr22 HAVANA exon 18389315 18389652 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 2; exon_id "ENSE00002704788.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1839 chr22 HAVANA CDS 18389315 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 2; exon_id "ENSE00002704788.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1840 chr22 HAVANA start_codon 18389576 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 2; exon_id "ENSE00002704788.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1841 chr22 HAVANA exon 18387398 18387605 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 3; exon_id "ENSE00002698801.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1842 chr22 HAVANA CDS 18387398 18387605 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 3; exon_id "ENSE00002698801.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1843 chr22 HAVANA exon 18385397 18385513 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 4; exon_id "ENSE00002693380.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1844 chr22 HAVANA CDS 18385397 18385513 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 4; exon_id "ENSE00002693380.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1845 chr22 HAVANA exon 18384644 18384745 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 5; exon_id "ENSE00002726542.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1846 chr22 HAVANA CDS 18384644 18384745 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 5; exon_id "ENSE00002726542.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1847 chr22 HAVANA exon 18383608 18383763 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 6; exon_id "ENSE00002688992.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1848 chr22 HAVANA CDS 18383608 18383763 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 6; exon_id "ENSE00002688992.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1849 chr22 HAVANA exon 18379490 18379747 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 7; exon_id "ENSE00003583117.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1850 chr22 HAVANA CDS 18379590 18379747 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 7; exon_id "ENSE00003583117.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1851 chr22 HAVANA stop_codon 18379587 18379589 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 7; exon_id "ENSE00003583117.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1852 chr22 HAVANA exon 18379012 18379127 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 8; exon_id "ENSE00003552179.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1853 chr22 HAVANA exon 18378050 18378176 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 9; exon_id "ENSE00003631077.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1854 chr22 HAVANA exon 18376574 18376670 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 10; exon_id "ENSE00003458345.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1855 chr22 HAVANA exon 18374251 18374398 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 11; exon_id "ENSE00003679410.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1856 chr22 HAVANA exon 18371800 18371996 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 12; exon_id "ENSE00003666674.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1857 chr22 HAVANA exon 18370089 18370201 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 13; exon_id "ENSE00003646936.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1858 chr22 HAVANA exon 18369936 18369998 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 14; exon_id "ENSE00003596293.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1859 chr22 HAVANA exon 18368644 18368817 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 15; exon_id "ENSE00003514017.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1860 chr22 HAVANA exon 18354603 18354789 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 16; exon_id "ENSE00003665034.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1861 chr22 HAVANA exon 18348690 18348778 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 17; exon_id "ENSE00003482313.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1862 chr22 HAVANA exon 18347665 18347752 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 18; exon_id "ENSE00003649827.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1863 chr22 HAVANA exon 18322358 18324783 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; exon_number 19; exon_id "ENSE00001829348.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1864 chr22 HAVANA UTR 18484159 18484267 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1865 chr22 HAVANA UTR 18389579 18389652 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1866 chr22 HAVANA UTR 18379490 18379589 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1867 chr22 HAVANA UTR 18379012 18379127 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1868 chr22 HAVANA UTR 18378050 18378176 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1869 chr22 HAVANA UTR 18376574 18376670 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1870 chr22 HAVANA UTR 18374251 18374398 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1871 chr22 HAVANA UTR 18371800 18371996 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1872 chr22 HAVANA UTR 18370089 18370201 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1873 chr22 HAVANA UTR 18369936 18369998 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1874 chr22 HAVANA UTR 18368644 18368817 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1875 chr22 HAVANA UTR 18354603 18354789 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1876 chr22 HAVANA UTR 18348690 18348778 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1877 chr22 HAVANA UTR 18347665 18347752 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1878 chr22 HAVANA UTR 18322358 18324783 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000495076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MICAL3-005"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316091.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1879 chr22 HAVANA transcript 18322717 18325248 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000578905.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MICAL3-016"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447358.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1880 chr22 HAVANA exon 18322717 18325248 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000578905.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MICAL3-016"; exon_number 1; exon_id "ENSE00002714485.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447358.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1881 chr22 HAVANA transcript 18322717 18389578 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1882 chr22 HAVANA exon 18389315 18389578 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 1; exon_id "ENSE00002048224.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1883 chr22 HAVANA CDS 18389315 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 1; exon_id "ENSE00002048224.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1884 chr22 HAVANA start_codon 18389576 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 1; exon_id "ENSE00002048224.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1885 chr22 HAVANA exon 18387398 18387605 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 2; exon_id "ENSE00002698801.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1886 chr22 HAVANA CDS 18387398 18387605 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 2; exon_id "ENSE00002698801.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1887 chr22 HAVANA exon 18385397 18385513 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 3; exon_id "ENSE00002693380.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1888 chr22 HAVANA CDS 18385397 18385513 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 3; exon_id "ENSE00002693380.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1889 chr22 HAVANA exon 18384644 18384745 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 4; exon_id "ENSE00002726542.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1890 chr22 HAVANA CDS 18384644 18384745 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 4; exon_id "ENSE00002726542.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1891 chr22 HAVANA exon 18383608 18383763 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 5; exon_id "ENSE00002688992.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1892 chr22 HAVANA CDS 18383608 18383763 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 5; exon_id "ENSE00002688992.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1893 chr22 HAVANA exon 18382214 18382314 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 6; exon_id "ENSE00002707115.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1894 chr22 HAVANA CDS 18382214 18382314 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 6; exon_id "ENSE00002707115.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1895 chr22 HAVANA exon 18379490 18379747 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 7; exon_id "ENSE00003480785.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1896 chr22 HAVANA CDS 18379490 18379747 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 7; exon_id "ENSE00003480785.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1897 chr22 HAVANA exon 18379012 18379127 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 8; exon_id "ENSE00003653418.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1898 chr22 HAVANA CDS 18379012 18379127 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 8; exon_id "ENSE00003653418.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1899 chr22 HAVANA exon 18378050 18378176 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 9; exon_id "ENSE00003676893.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1900 chr22 HAVANA CDS 18378050 18378176 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 9; exon_id "ENSE00003676893.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1901 chr22 HAVANA exon 18376574 18376670 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 10; exon_id "ENSE00003580828.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1902 chr22 HAVANA CDS 18376574 18376670 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 10; exon_id "ENSE00003580828.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1903 chr22 HAVANA exon 18374251 18374398 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 11; exon_id "ENSE00003609414.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1904 chr22 HAVANA CDS 18374251 18374398 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 11; exon_id "ENSE00003609414.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1905 chr22 HAVANA exon 18371800 18371996 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 12; exon_id "ENSE00003461380.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1906 chr22 HAVANA CDS 18371800 18371996 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 12; exon_id "ENSE00003461380.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1907 chr22 HAVANA exon 18370089 18370201 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 13; exon_id "ENSE00003634930.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1908 chr22 HAVANA CDS 18370089 18370201 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 13; exon_id "ENSE00003634930.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1909 chr22 HAVANA exon 18369936 18369998 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 14; exon_id "ENSE00003493513.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1910 chr22 HAVANA CDS 18369936 18369998 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 14; exon_id "ENSE00003493513.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1911 chr22 HAVANA exon 18368644 18368817 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 15; exon_id "ENSE00003482929.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1912 chr22 HAVANA CDS 18368644 18368817 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 15; exon_id "ENSE00003482929.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1913 chr22 HAVANA exon 18367041 18367124 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 16; exon_id "ENSE00002078084.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1914 chr22 HAVANA CDS 18367041 18367124 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 16; exon_id "ENSE00002078084.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1915 chr22 HAVANA exon 18354603 18354789 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 17; exon_id "ENSE00003545912.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1916 chr22 HAVANA CDS 18354603 18354789 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 17; exon_id "ENSE00003545912.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1917 chr22 HAVANA exon 18348690 18348778 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 18; exon_id "ENSE00003607110.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1918 chr22 HAVANA CDS 18348690 18348778 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 18; exon_id "ENSE00003607110.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1919 chr22 HAVANA exon 18347665 18347752 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 19; exon_id "ENSE00003592365.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1920 chr22 HAVANA CDS 18347665 18347752 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 19; exon_id "ENSE00003592365.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1921 chr22 HAVANA exon 18322717 18324783 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 20; exon_id "ENSE00001792381.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1922 chr22 HAVANA CDS 18324545 18324783 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 20; exon_id "ENSE00001792381.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1923 chr22 HAVANA stop_codon 18324542 18324544 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; exon_number 20; exon_id "ENSE00001792381.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1924 chr22 HAVANA UTR 18322717 18324544 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000414725.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316088.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1925 chr22 HAVANA transcript 18324441 18389593 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1926 chr22 HAVANA exon 18389315 18389593 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 1; exon_id "ENSE00001381210.4"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1927 chr22 HAVANA CDS 18389315 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 1; exon_id "ENSE00001381210.4"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1928 chr22 HAVANA start_codon 18389576 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 1; exon_id "ENSE00001381210.4"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1929 chr22 HAVANA exon 18387398 18387605 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 2; exon_id "ENSE00002698801.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1930 chr22 HAVANA CDS 18387398 18387605 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 2; exon_id "ENSE00002698801.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1931 chr22 HAVANA exon 18385397 18385513 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 3; exon_id "ENSE00002693380.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1932 chr22 HAVANA CDS 18385397 18385513 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 3; exon_id "ENSE00002693380.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1933 chr22 HAVANA exon 18384644 18384745 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 4; exon_id "ENSE00002726542.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1934 chr22 HAVANA CDS 18384644 18384745 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 4; exon_id "ENSE00002726542.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1935 chr22 HAVANA exon 18383608 18383763 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 5; exon_id "ENSE00002688992.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1936 chr22 HAVANA CDS 18383608 18383763 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 5; exon_id "ENSE00002688992.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1937 chr22 HAVANA exon 18382214 18382314 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 6; exon_id "ENSE00002707115.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1938 chr22 HAVANA CDS 18382214 18382314 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 6; exon_id "ENSE00002707115.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1939 chr22 HAVANA exon 18379490 18379747 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 7; exon_id "ENSE00003480785.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1940 chr22 HAVANA CDS 18379490 18379747 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 7; exon_id "ENSE00003480785.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1941 chr22 HAVANA exon 18379012 18379127 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 8; exon_id "ENSE00003653418.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1942 chr22 HAVANA CDS 18379012 18379127 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 8; exon_id "ENSE00003653418.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1943 chr22 HAVANA exon 18378050 18378176 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 9; exon_id "ENSE00003676893.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1944 chr22 HAVANA CDS 18378050 18378176 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 9; exon_id "ENSE00003676893.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1945 chr22 HAVANA exon 18376574 18376670 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 10; exon_id "ENSE00003580828.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1946 chr22 HAVANA CDS 18376574 18376670 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 10; exon_id "ENSE00003580828.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1947 chr22 HAVANA exon 18374251 18374398 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 11; exon_id "ENSE00003609414.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1948 chr22 HAVANA CDS 18374251 18374398 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 11; exon_id "ENSE00003609414.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1949 chr22 HAVANA exon 18371800 18371996 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 12; exon_id "ENSE00003461380.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1950 chr22 HAVANA CDS 18371800 18371996 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 12; exon_id "ENSE00003461380.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1951 chr22 HAVANA exon 18370089 18370201 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 13; exon_id "ENSE00003634930.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1952 chr22 HAVANA CDS 18370089 18370201 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 13; exon_id "ENSE00003634930.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1953 chr22 HAVANA exon 18369936 18369998 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 14; exon_id "ENSE00003493513.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1954 chr22 HAVANA CDS 18369936 18369998 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 14; exon_id "ENSE00003493513.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1955 chr22 HAVANA exon 18368644 18368817 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 15; exon_id "ENSE00003482929.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1956 chr22 HAVANA CDS 18368644 18368817 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 15; exon_id "ENSE00003482929.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1957 chr22 HAVANA exon 18354603 18354789 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 16; exon_id "ENSE00003545912.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1958 chr22 HAVANA CDS 18354603 18354789 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 16; exon_id "ENSE00003545912.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1959 chr22 HAVANA exon 18348690 18348778 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 17; exon_id "ENSE00003607110.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1960 chr22 HAVANA CDS 18348690 18348778 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 17; exon_id "ENSE00003607110.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1961 chr22 HAVANA exon 18347665 18347752 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 18; exon_id "ENSE00003592365.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1962 chr22 HAVANA CDS 18347665 18347752 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 18; exon_id "ENSE00003592365.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1963 chr22 HAVANA exon 18324441 18324783 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 19; exon_id "ENSE00001923595.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1964 chr22 HAVANA CDS 18324545 18324783 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 19; exon_id "ENSE00001923595.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1965 chr22 HAVANA stop_codon 18324542 18324544 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; exon_number 19; exon_id "ENSE00001923595.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1966 chr22 HAVANA UTR 18389579 18389593 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1967 chr22 HAVANA UTR 18324441 18324544 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000383094.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316087.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1968 chr22 ENSEMBL transcript 18324542 18507325 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1969 chr22 ENSEMBL exon 18507047 18507325 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 1; exon_id "ENSE00002719648.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1970 chr22 ENSEMBL exon 18389315 18389652 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 2; exon_id "ENSE00002704788.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1971 chr22 ENSEMBL CDS 18389315 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 2; exon_id "ENSE00002704788.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1972 chr22 ENSEMBL start_codon 18389576 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 2; exon_id "ENSE00002704788.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1973 chr22 ENSEMBL exon 18387398 18387605 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 3; exon_id "ENSE00002698801.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1974 chr22 ENSEMBL CDS 18387398 18387605 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 3; exon_id "ENSE00002698801.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1975 chr22 ENSEMBL exon 18385397 18385513 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 4; exon_id "ENSE00002693380.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1976 chr22 ENSEMBL CDS 18385397 18385513 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 4; exon_id "ENSE00002693380.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1977 chr22 ENSEMBL exon 18384644 18384745 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 5; exon_id "ENSE00002726542.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1978 chr22 ENSEMBL CDS 18384644 18384745 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 5; exon_id "ENSE00002726542.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1979 chr22 ENSEMBL exon 18383608 18383763 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 6; exon_id "ENSE00002688992.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1980 chr22 ENSEMBL CDS 18383608 18383763 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 6; exon_id "ENSE00002688992.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1981 chr22 ENSEMBL exon 18382214 18382314 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 7; exon_id "ENSE00002707115.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1982 chr22 ENSEMBL CDS 18382214 18382314 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 7; exon_id "ENSE00002707115.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1983 chr22 ENSEMBL exon 18379490 18379747 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 8; exon_id "ENSE00003480785.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1984 chr22 ENSEMBL CDS 18379490 18379747 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 8; exon_id "ENSE00003480785.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1985 chr22 ENSEMBL exon 18379012 18379127 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 9; exon_id "ENSE00003653418.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1986 chr22 ENSEMBL CDS 18379012 18379127 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 9; exon_id "ENSE00003653418.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1987 chr22 ENSEMBL exon 18378050 18378176 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 10; exon_id "ENSE00003676893.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1988 chr22 ENSEMBL CDS 18378050 18378176 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 10; exon_id "ENSE00003676893.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1989 chr22 ENSEMBL exon 18376574 18376670 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 11; exon_id "ENSE00003580828.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1990 chr22 ENSEMBL CDS 18376574 18376670 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 11; exon_id "ENSE00003580828.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1991 chr22 ENSEMBL exon 18374251 18374398 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 12; exon_id "ENSE00003609414.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1992 chr22 ENSEMBL CDS 18374251 18374398 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 12; exon_id "ENSE00003609414.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1993 chr22 ENSEMBL exon 18371800 18371996 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 13; exon_id "ENSE00003461380.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1994 chr22 ENSEMBL CDS 18371800 18371996 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 13; exon_id "ENSE00003461380.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1995 chr22 ENSEMBL exon 18370089 18370201 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 14; exon_id "ENSE00003634930.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1996 chr22 ENSEMBL CDS 18370089 18370201 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 14; exon_id "ENSE00003634930.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1997 chr22 ENSEMBL exon 18369936 18369998 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 15; exon_id "ENSE00003493513.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1998 chr22 ENSEMBL CDS 18369936 18369998 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 15; exon_id "ENSE00003493513.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
1999 chr22 ENSEMBL exon 18368644 18368817 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 16; exon_id "ENSE00003482929.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2000 chr22 ENSEMBL CDS 18368644 18368817 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 16; exon_id "ENSE00003482929.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2001 chr22 ENSEMBL exon 18367041 18367124 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 17; exon_id "ENSE00002078084.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2002 chr22 ENSEMBL CDS 18367041 18367124 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 17; exon_id "ENSE00002078084.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2003 chr22 ENSEMBL exon 18354603 18354789 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 18; exon_id "ENSE00003545912.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2004 chr22 ENSEMBL CDS 18354603 18354789 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 18; exon_id "ENSE00003545912.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2005 chr22 ENSEMBL exon 18348690 18348778 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 19; exon_id "ENSE00003607110.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2006 chr22 ENSEMBL CDS 18348690 18348778 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 19; exon_id "ENSE00003607110.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2007 chr22 ENSEMBL exon 18347665 18347752 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 20; exon_id "ENSE00003592365.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2008 chr22 ENSEMBL CDS 18347665 18347752 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 20; exon_id "ENSE00003592365.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2009 chr22 ENSEMBL exon 18324542 18324783 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 21; exon_id "ENSE00001295331.6"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2010 chr22 ENSEMBL CDS 18324545 18324783 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 21; exon_id "ENSE00001295331.6"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2011 chr22 ENSEMBL stop_codon 18324542 18324544 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; exon_number 21; exon_id "ENSE00001295331.6"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2012 chr22 ENSEMBL UTR 18507047 18507325 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2013 chr22 ENSEMBL UTR 18389579 18389652 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2014 chr22 ENSEMBL UTR 18324542 18324544 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000207726.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2015 chr22 ENSEMBL transcript 18342922 18507325 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2016 chr22 ENSEMBL exon 18507047 18507325 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 1; exon_id "ENSE00002719648.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2017 chr22 ENSEMBL exon 18389315 18389652 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 2; exon_id "ENSE00002704788.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2018 chr22 ENSEMBL CDS 18389315 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 2; exon_id "ENSE00002704788.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2019 chr22 ENSEMBL start_codon 18389576 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 2; exon_id "ENSE00002704788.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2020 chr22 ENSEMBL exon 18387398 18387605 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 3; exon_id "ENSE00002698801.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2021 chr22 ENSEMBL CDS 18387398 18387605 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 3; exon_id "ENSE00002698801.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2022 chr22 ENSEMBL exon 18385397 18385513 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 4; exon_id "ENSE00002693380.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2023 chr22 ENSEMBL CDS 18385397 18385513 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 4; exon_id "ENSE00002693380.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2024 chr22 ENSEMBL exon 18384644 18384745 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 5; exon_id "ENSE00002726542.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2025 chr22 ENSEMBL CDS 18384644 18384745 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 5; exon_id "ENSE00002726542.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2026 chr22 ENSEMBL exon 18383608 18383763 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 6; exon_id "ENSE00002688992.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2027 chr22 ENSEMBL CDS 18383608 18383763 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 6; exon_id "ENSE00002688992.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2028 chr22 ENSEMBL exon 18382214 18382314 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 7; exon_id "ENSE00002707115.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2029 chr22 ENSEMBL CDS 18382214 18382314 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 7; exon_id "ENSE00002707115.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2030 chr22 ENSEMBL exon 18379490 18379747 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 8; exon_id "ENSE00003480785.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2031 chr22 ENSEMBL CDS 18379490 18379747 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 8; exon_id "ENSE00003480785.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2032 chr22 ENSEMBL exon 18379012 18379127 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 9; exon_id "ENSE00003653418.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2033 chr22 ENSEMBL CDS 18379012 18379127 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 9; exon_id "ENSE00003653418.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2034 chr22 ENSEMBL exon 18378050 18378176 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 10; exon_id "ENSE00003676893.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2035 chr22 ENSEMBL CDS 18378050 18378176 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 10; exon_id "ENSE00003676893.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2036 chr22 ENSEMBL exon 18376574 18376670 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 11; exon_id "ENSE00003580828.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2037 chr22 ENSEMBL CDS 18376574 18376670 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 11; exon_id "ENSE00003580828.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2038 chr22 ENSEMBL exon 18374251 18374398 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 12; exon_id "ENSE00003609414.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2039 chr22 ENSEMBL CDS 18374251 18374398 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 12; exon_id "ENSE00003609414.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2040 chr22 ENSEMBL exon 18371800 18371996 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 13; exon_id "ENSE00003461380.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2041 chr22 ENSEMBL CDS 18371800 18371996 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 13; exon_id "ENSE00003461380.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2042 chr22 ENSEMBL exon 18370089 18370201 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 14; exon_id "ENSE00003634930.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2043 chr22 ENSEMBL CDS 18370089 18370201 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 14; exon_id "ENSE00003634930.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2044 chr22 ENSEMBL exon 18369936 18369998 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 15; exon_id "ENSE00003493513.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2045 chr22 ENSEMBL CDS 18369936 18369998 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 15; exon_id "ENSE00003493513.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2046 chr22 ENSEMBL exon 18368644 18368817 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 16; exon_id "ENSE00003482929.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2047 chr22 ENSEMBL CDS 18368644 18368817 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 16; exon_id "ENSE00003482929.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2048 chr22 ENSEMBL exon 18363971 18364069 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 17; exon_id "ENSE00001778759.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2049 chr22 ENSEMBL CDS 18363971 18364069 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 17; exon_id "ENSE00001778759.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2050 chr22 ENSEMBL exon 18362112 18362168 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 18; exon_id "ENSE00001673958.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2051 chr22 ENSEMBL CDS 18362112 18362168 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 18; exon_id "ENSE00001673958.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2052 chr22 ENSEMBL exon 18358213 18358320 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 19; exon_id "ENSE00001647641.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2053 chr22 ENSEMBL CDS 18358213 18358320 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 19; exon_id "ENSE00001647641.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2054 chr22 ENSEMBL exon 18355513 18355620 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 20; exon_id "ENSE00001688998.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2055 chr22 ENSEMBL CDS 18355513 18355620 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 20; exon_id "ENSE00001688998.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2056 chr22 ENSEMBL exon 18354603 18354789 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 21; exon_id "ENSE00003545912.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2057 chr22 ENSEMBL CDS 18354603 18354789 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 21; exon_id "ENSE00003545912.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2058 chr22 ENSEMBL exon 18348690 18348778 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 22; exon_id "ENSE00003607110.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2059 chr22 ENSEMBL CDS 18348690 18348778 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 22; exon_id "ENSE00003607110.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2060 chr22 ENSEMBL exon 18342922 18347752 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 23; exon_id "ENSE00001616343.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2061 chr22 ENSEMBL CDS 18347423 18347752 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 23; exon_id "ENSE00001616343.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2062 chr22 ENSEMBL stop_codon 18347420 18347422 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; exon_number 23; exon_id "ENSE00001616343.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2063 chr22 ENSEMBL UTR 18507047 18507325 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2064 chr22 ENSEMBL UTR 18389579 18389652 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2065 chr22 ENSEMBL UTR 18342922 18347422 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000429452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2066 chr22 HAVANA transcript 18342929 18378054 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2067 chr22 HAVANA exon 18378050 18378054 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 1; exon_id "ENSE00002687380.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2068 chr22 HAVANA CDS 18378050 18378054 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 1; exon_id "ENSE00002687380.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2069 chr22 HAVANA exon 18376574 18376670 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 2; exon_id "ENSE00003580828.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2070 chr22 HAVANA CDS 18376574 18376670 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 2; exon_id "ENSE00003580828.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2071 chr22 HAVANA exon 18374251 18374398 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 3; exon_id "ENSE00003609414.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2072 chr22 HAVANA CDS 18374251 18374398 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 3; exon_id "ENSE00003609414.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2073 chr22 HAVANA exon 18371800 18371996 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 4; exon_id "ENSE00003461380.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2074 chr22 HAVANA CDS 18371800 18371996 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 4; exon_id "ENSE00003461380.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2075 chr22 HAVANA exon 18370089 18370201 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 5; exon_id "ENSE00003634930.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2076 chr22 HAVANA CDS 18370089 18370201 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 5; exon_id "ENSE00003634930.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2077 chr22 HAVANA exon 18369936 18369998 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 6; exon_id "ENSE00003493513.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2078 chr22 HAVANA CDS 18369936 18369998 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 6; exon_id "ENSE00003493513.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2079 chr22 HAVANA exon 18368644 18368817 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 7; exon_id "ENSE00003482929.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2080 chr22 HAVANA CDS 18368644 18368817 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 7; exon_id "ENSE00003482929.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2081 chr22 HAVANA exon 18367041 18367124 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 8; exon_id "ENSE00002078084.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2082 chr22 HAVANA CDS 18367041 18367124 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 8; exon_id "ENSE00002078084.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2083 chr22 HAVANA exon 18354603 18354789 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 9; exon_id "ENSE00003545912.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2084 chr22 HAVANA CDS 18354603 18354789 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 9; exon_id "ENSE00003545912.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2085 chr22 HAVANA exon 18348690 18348778 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 10; exon_id "ENSE00003607110.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2086 chr22 HAVANA CDS 18348690 18348778 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 10; exon_id "ENSE00003607110.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2087 chr22 HAVANA exon 18342929 18347752 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 11; exon_id "ENSE00001840041.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2088 chr22 HAVANA CDS 18347423 18347752 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 11; exon_id "ENSE00001840041.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2089 chr22 HAVANA stop_codon 18347420 18347422 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; exon_number 11; exon_id "ENSE00001840041.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2090 chr22 HAVANA UTR 18342929 18347422 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000461307.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316090.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2091 chr22 HAVANA transcript 18347381 18389640 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2092 chr22 HAVANA exon 18389315 18389640 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 1; exon_id "ENSE00002706079.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2093 chr22 HAVANA CDS 18389315 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 1; exon_id "ENSE00002706079.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2094 chr22 HAVANA start_codon 18389576 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 1; exon_id "ENSE00002706079.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2095 chr22 HAVANA exon 18387398 18387605 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 2; exon_id "ENSE00002698801.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2096 chr22 HAVANA CDS 18387398 18387605 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 2; exon_id "ENSE00002698801.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2097 chr22 HAVANA exon 18385397 18385513 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 3; exon_id "ENSE00002693380.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2098 chr22 HAVANA CDS 18385397 18385513 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 3; exon_id "ENSE00002693380.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2099 chr22 HAVANA exon 18384644 18384745 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 4; exon_id "ENSE00002726542.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2100 chr22 HAVANA CDS 18384644 18384745 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 4; exon_id "ENSE00002726542.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2101 chr22 HAVANA exon 18383608 18383763 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 5; exon_id "ENSE00002688992.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2102 chr22 HAVANA CDS 18383608 18383763 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 5; exon_id "ENSE00002688992.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2103 chr22 HAVANA exon 18382214 18382314 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 6; exon_id "ENSE00002707115.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
2104 chr22 HAVANA CDS 18382214 18382314 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 6; exon_id "ENSE00002707115.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2105 chr22 HAVANA exon 18379490 18379747 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 7; exon_id "ENSE00003480785.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2106 chr22 HAVANA CDS 18379490 18379747 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 7; exon_id "ENSE00003480785.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2107 chr22 HAVANA exon 18379012 18379127 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 8; exon_id "ENSE00003653418.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2108 chr22 HAVANA CDS 18379012 18379127 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 8; exon_id "ENSE00003653418.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2109 chr22 HAVANA exon 18378050 18378176 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 9; exon_id "ENSE00003676893.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2110 chr22 HAVANA CDS 18378050 18378176 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 9; exon_id "ENSE00003676893.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2111 chr22 HAVANA exon 18376574 18376670 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 10; exon_id "ENSE00003580828.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2112 chr22 HAVANA CDS 18376574 18376670 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 10; exon_id "ENSE00003580828.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2113 chr22 HAVANA exon 18374251 18374398 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 11; exon_id "ENSE00003609414.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2114 chr22 HAVANA CDS 18374251 18374398 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 11; exon_id "ENSE00003609414.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2115 chr22 HAVANA exon 18371800 18371996 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 12; exon_id "ENSE00003461380.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2116 chr22 HAVANA CDS 18371800 18371996 . - 1 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 12; exon_id "ENSE00003461380.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2117 chr22 HAVANA exon 18370089 18370201 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 13; exon_id "ENSE00003634930.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2118 chr22 HAVANA CDS 18370089 18370201 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 13; exon_id "ENSE00003634930.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2119 chr22 HAVANA exon 18369936 18369998 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 14; exon_id "ENSE00003493513.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2120 chr22 HAVANA CDS 18369936 18369998 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 14; exon_id "ENSE00003493513.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2121 chr22 HAVANA exon 18368644 18368817 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 15; exon_id "ENSE00003482929.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2122 chr22 HAVANA CDS 18368644 18368817 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 15; exon_id "ENSE00003482929.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2123 chr22 HAVANA exon 18363971 18364069 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 16; exon_id "ENSE00001778759.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2124 chr22 HAVANA CDS 18363971 18364069 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 16; exon_id "ENSE00001778759.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2125 chr22 HAVANA exon 18362112 18362168 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 17; exon_id "ENSE00001673958.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2126 chr22 HAVANA CDS 18362112 18362168 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 17; exon_id "ENSE00001673958.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2127 chr22 HAVANA exon 18358213 18358320 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 18; exon_id "ENSE00001647641.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2128 chr22 HAVANA CDS 18358213 18358320 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 18; exon_id "ENSE00001647641.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2129 chr22 HAVANA exon 18355513 18355620 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 19; exon_id "ENSE00001688998.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2130 chr22 HAVANA CDS 18355513 18355620 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 19; exon_id "ENSE00001688998.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2131 chr22 HAVANA exon 18354603 18354789 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 20; exon_id "ENSE00003545912.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2132 chr22 HAVANA CDS 18354603 18354789 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 20; exon_id "ENSE00003545912.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2133 chr22 HAVANA exon 18348690 18348778 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 21; exon_id "ENSE00003607110.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2134 chr22 HAVANA CDS 18348690 18348778 . - 2 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 21; exon_id "ENSE00003607110.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2135 chr22 HAVANA exon 18347381 18347752 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 22; exon_id "ENSE00002716821.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2136 chr22 HAVANA CDS 18347423 18347752 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 22; exon_id "ENSE00002716821.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2137 chr22 HAVANA stop_codon 18347420 18347422 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; exon_number 22; exon_id "ENSE00002716821.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2138 chr22 HAVANA UTR 18389579 18389640 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2139 chr22 HAVANA UTR 18347381 18347422 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000585038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MICAL3-012"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS46661.1"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000447359.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2140 chr22 HAVANA transcript 18348690 18359469 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000462645.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MICAL3-008"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316094.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2141 chr22 HAVANA exon 18359174 18359469 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000462645.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MICAL3-008"; exon_number 1; exon_id "ENSE00001847385.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316094.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2142 chr22 HAVANA exon 18354603 18354789 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000462645.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MICAL3-008"; exon_number 2; exon_id "ENSE00003665034.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316094.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2143 chr22 HAVANA exon 18348690 18348778 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000462645.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MICAL3-008"; exon_number 3; exon_id "ENSE00003482313.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316094.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2144 chr22 HAVANA transcript 18354696 18359638 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000465886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MICAL3-007"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316093.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2145 chr22 HAVANA exon 18359174 18359638 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000465886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MICAL3-007"; exon_number 1; exon_id "ENSE00001875222.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316093.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2146 chr22 HAVANA exon 18354696 18354789 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000465886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MICAL3-007"; exon_number 2; exon_id "ENSE00001939452.1"; level 2; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316093.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2147 chr22 HAVANA transcript 18354700 18359505 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000498345.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MICAL3-009"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316095.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2148 chr22 HAVANA exon 18359174 18359505 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000498345.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MICAL3-009"; exon_number 1; exon_id "ENSE00001898627.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316095.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2149 chr22 HAVANA exon 18357977 18358092 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000498345.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MICAL3-009"; exon_number 2; exon_id "ENSE00001935821.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316095.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2150 chr22 HAVANA exon 18354700 18354789 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000498345.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MICAL3-009"; exon_number 3; exon_id "ENSE00001849894.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316095.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2151 chr22 HAVANA transcript 18387494 18483946 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000424046.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316092.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2152 chr22 HAVANA exon 18483855 18483946 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000424046.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-006"; exon_number 1; exon_id "ENSE00001633107.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316092.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2153 chr22 HAVANA exon 18389315 18389652 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000424046.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-006"; exon_number 2; exon_id "ENSE00002704788.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316092.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2154 chr22 HAVANA CDS 18389315 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000424046.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-006"; exon_number 2; exon_id "ENSE00002704788.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316092.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2155 chr22 HAVANA start_codon 18389576 18389578 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000424046.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-006"; exon_number 2; exon_id "ENSE00002704788.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316092.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2156 chr22 HAVANA exon 18387494 18387605 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000424046.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-006"; exon_number 3; exon_id "ENSE00001799837.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316092.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2157 chr22 HAVANA CDS 18387494 18387605 . - 0 gene_id "ENSG00000243156.3"; transcript_id "ENST00000424046.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-006"; exon_number 3; exon_id "ENSE00001799837.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316092.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2158 chr22 HAVANA UTR 18483855 18483946 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000424046.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316092.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2159 chr22 HAVANA UTR 18389579 18389652 . - . gene_id "ENSG00000243156.3"; transcript_id "ENST00000424046.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MICAL3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MICAL3-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150067.4"; havana_transcript "OTTHUMT00000316092.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2160 chr22 HAVANA gene 18270418 18294263 . - . gene_id "ENSG00000093100.13"; transcript_id "ENSG00000093100.13"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "XXbac-B461K10.4"; transcript_type "processed_transcript"; transcript_status "NOVEL"; transcript_name "XXbac-B461K10.4"; level 1; havana_gene "OTTHUMG00000150085.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2161 chr22 HAVANA transcript 18270418 18294263 . - . gene_id "ENSG00000093100.13"; transcript_id "ENST00000476405.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "XXbac-B461K10.4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "XXbac-B461K10.4-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150085.1"; havana_transcript "OTTHUMT00000316175.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2162 chr22 HAVANA exon 18293469 18294263 . - . gene_id "ENSG00000093100.13"; transcript_id "ENST00000476405.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "XXbac-B461K10.4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "XXbac-B461K10.4-002"; exon_number 1; exon_id "ENSE00001942003.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150085.1"; havana_transcript "OTTHUMT00000316175.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2163 chr22 HAVANA exon 18291610 18291703 . - . gene_id "ENSG00000093100.13"; transcript_id "ENST00000476405.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "XXbac-B461K10.4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "XXbac-B461K10.4-002"; exon_number 2; exon_id "ENSE00003669728.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150085.1"; havana_transcript "OTTHUMT00000316175.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2164 chr22 HAVANA exon 18273968 18274067 . - . gene_id "ENSG00000093100.13"; transcript_id "ENST00000476405.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "XXbac-B461K10.4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "XXbac-B461K10.4-002"; exon_number 3; exon_id "ENSE00003496497.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150085.1"; havana_transcript "OTTHUMT00000316175.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2165 chr22 HAVANA exon 18273764 18273837 . - . gene_id "ENSG00000093100.13"; transcript_id "ENST00000476405.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "XXbac-B461K10.4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "XXbac-B461K10.4-002"; exon_number 4; exon_id "ENSE00003543642.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150085.1"; havana_transcript "OTTHUMT00000316175.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2166 chr22 HAVANA exon 18270418 18273682 . - . gene_id "ENSG00000093100.13"; transcript_id "ENST00000476405.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "XXbac-B461K10.4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "XXbac-B461K10.4-002"; exon_number 5; exon_id "ENSE00001889757.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150085.1"; havana_transcript "OTTHUMT00000316175.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2167 chr22 ENSEMBL gene 18463634 18463727 . - . gene_id "ENSG00000207780.1"; transcript_id "ENSG00000207780.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR648"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR648"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2168 chr22 ENSEMBL transcript 18463634 18463727 . - . gene_id "ENSG00000207780.1"; transcript_id "ENST00000385046.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR648"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR648-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2169 chr22 ENSEMBL exon 18463634 18463727 . - . gene_id "ENSG00000207780.1"; transcript_id "ENST00000385046.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR648"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR648-201"; exon_number 1; exon_id "ENSE00001500053.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2170 chr22 HAVANA gene 18465971 18466385 . - . gene_id "ENSG00000235445.1"; transcript_id "ENSG00000235445.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "XXbac-B476C20.14"; transcript_type "sense_intronic"; transcript_status "NOVEL"; transcript_name "XXbac-B476C20.14"; level 2; havana_gene "OTTHUMG00000150069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2171 chr22 HAVANA transcript 18465971 18466385 . - . gene_id "ENSG00000235445.1"; transcript_id "ENST00000429618.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "XXbac-B476C20.14"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.14-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150069.1"; havana_transcript "OTTHUMT00000316097.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2172 chr22 HAVANA exon 18466108 18466385 . - . gene_id "ENSG00000235445.1"; transcript_id "ENST00000429618.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "XXbac-B476C20.14"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.14-001"; exon_number 1; exon_id "ENSE00001689501.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150069.1"; havana_transcript "OTTHUMT00000316097.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2173 chr22 HAVANA exon 18465971 18466053 . - . gene_id "ENSG00000235445.1"; transcript_id "ENST00000429618.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "XXbac-B476C20.14"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.14-001"; exon_number 2; exon_id "ENSE00001700628.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150069.1"; havana_transcript "OTTHUMT00000316097.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2174 chr22 HAVANA gene 18487036 18490074 . - . gene_id "ENSG00000234913.1"; transcript_id "ENSG00000234913.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "XXbac-B476C20.13"; transcript_type "sense_intronic"; transcript_status "NOVEL"; transcript_name "XXbac-B476C20.13"; level 2; havana_gene "OTTHUMG00000150064.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2175 chr22 HAVANA transcript 18487036 18490074 . - . gene_id "ENSG00000234913.1"; transcript_id "ENST00000441167.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "XXbac-B476C20.13"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.13-001"; level 2; tag "non_canonical_TEC"; tag "basic"; havana_gene "OTTHUMG00000150064.1"; havana_transcript "OTTHUMT00000316078.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2176 chr22 HAVANA exon 18489928 18490074 . - . gene_id "ENSG00000234913.1"; transcript_id "ENST00000441167.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "XXbac-B476C20.13"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.13-001"; exon_number 1; exon_id "ENSE00001769829.1"; level 2; tag "non_canonical_TEC"; tag "basic"; havana_gene "OTTHUMG00000150064.1"; havana_transcript "OTTHUMT00000316078.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2177 chr22 HAVANA exon 18487036 18489381 . - . gene_id "ENSG00000234913.1"; transcript_id "ENST00000441167.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "XXbac-B476C20.13"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.13-001"; exon_number 2; exon_id "ENSE00001670794.1"; level 2; tag "non_canonical_TEC"; tag "basic"; havana_gene "OTTHUMG00000150064.1"; havana_transcript "OTTHUMT00000316078.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2178 chr22 HAVANA gene 18501980 18502966 . + . gene_id "ENSG00000237446.1"; transcript_id "ENSG00000237446.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RHEBP3"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "RHEBP3"; level 2; havana_gene "OTTHUMG00000150061.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2179 chr22 HAVANA transcript 18501980 18502966 . + . gene_id "ENSG00000237446.1"; transcript_id "ENST00000411920.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RHEBP3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RHEBP3-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150061.1"; havana_transcript "OTTHUMT00000316074.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2180 chr22 HAVANA exon 18501980 18502177 . + . gene_id "ENSG00000237446.1"; transcript_id "ENST00000411920.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RHEBP3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RHEBP3-001"; exon_number 1; exon_id "ENSE00001687294.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150061.1"; havana_transcript "OTTHUMT00000316074.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2181 chr22 HAVANA exon 18502502 18502567 . + . gene_id "ENSG00000237446.1"; transcript_id "ENST00000411920.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RHEBP3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RHEBP3-001"; exon_number 2; exon_id "ENSE00001796823.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150061.1"; havana_transcript "OTTHUMT00000316074.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2182 chr22 HAVANA exon 18502880 18502966 . + . gene_id "ENSG00000237446.1"; transcript_id "ENST00000411920.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RHEBP3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RHEBP3-001"; exon_number 3; exon_id "ENSE00001783463.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150061.1"; havana_transcript "OTTHUMT00000316074.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2183 chr22 HAVANA gene 18512151 18520734 . + . gene_id "ENSG00000235295.1"; transcript_id "ENSG00000235295.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B476C20.17"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "XXbac-B476C20.17"; level 2; havana_gene "OTTHUMG00000153506.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2184 chr22 HAVANA transcript 18512151 18520734 . + . gene_id "ENSG00000235295.1"; transcript_id "ENST00000443243.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B476C20.17"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.17-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000153506.1"; havana_transcript "OTTHUMT00000331424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2185 chr22 HAVANA exon 18512151 18512320 . + . gene_id "ENSG00000235295.1"; transcript_id "ENST00000443243.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B476C20.17"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.17-001"; exon_number 1; exon_id "ENSE00001666605.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000153506.1"; havana_transcript "OTTHUMT00000331424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2186 chr22 HAVANA exon 18518526 18520734 . + . gene_id "ENSG00000235295.1"; transcript_id "ENST00000443243.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B476C20.17"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.17-001"; exon_number 2; exon_id "ENSE00001722875.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000153506.1"; havana_transcript "OTTHUMT00000331424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2187 chr22 HAVANA gene 18559293 18561650 . - . gene_id "ENSG00000225335.2"; transcript_id "ENSG00000225335.2"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B476C20.9"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "XXbac-B476C20.9"; level 1; havana_gene "OTTHUMG00000149968.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2188 chr22 HAVANA transcript 18559293 18560563 . - . gene_id "ENSG00000225335.2"; transcript_id "ENST00000426483.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B476C20.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.9-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000149968.2"; havana_transcript "OTTHUMT00000314642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2189 chr22 HAVANA exon 18560295 18560563 . - . gene_id "ENSG00000225335.2"; transcript_id "ENST00000426483.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B476C20.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.9-001"; exon_number 1; exon_id "ENSE00001624214.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000149968.2"; havana_transcript "OTTHUMT00000314642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2190 chr22 HAVANA exon 18559293 18559828 . - . gene_id "ENSG00000225335.2"; transcript_id "ENST00000426483.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B476C20.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.9-001"; exon_number 2; exon_id "ENSE00001766432.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000149968.2"; havana_transcript "OTTHUMT00000314642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2191 chr22 HAVANA transcript 18559952 18561650 . - . gene_id "ENSG00000225335.2"; transcript_id "ENST00000607927.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B476C20.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.9-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000149968.2"; havana_transcript "OTTHUMT00000472249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2192 chr22 HAVANA exon 18559952 18561650 . - . gene_id "ENSG00000225335.2"; transcript_id "ENST00000607927.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B476C20.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.9-002"; exon_number 1; exon_id "ENSE00003708348.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149968.2"; havana_transcript "OTTHUMT00000472249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2193 chr22 HAVANA gene 18560689 18613905 . + . gene_id "ENSG00000215193.8"; transcript_id "ENSG00000215193.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26"; level 1; havana_gene "OTTHUMG00000149970.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2194 chr22 HAVANA transcript 18560689 18588162 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2195 chr22 HAVANA exon 18560689 18560813 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; exon_number 1; exon_id "ENSE00001323463.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2196 chr22 HAVANA exon 18561062 18561372 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; exon_number 2; exon_id "ENSE00001316061.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2197 chr22 HAVANA CDS 18561143 18561372 . + 0 gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; exon_number 2; exon_id "ENSE00001316061.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2198 chr22 HAVANA start_codon 18561143 18561145 . + 0 gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; exon_number 2; exon_id "ENSE00001316061.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2199 chr22 HAVANA exon 18562640 18562780 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; exon_number 3; exon_id "ENSE00001672140.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2200 chr22 HAVANA CDS 18562640 18562780 . + 1 gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; exon_number 3; exon_id "ENSE00001672140.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2201 chr22 HAVANA exon 18566203 18566498 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; exon_number 4; exon_id "ENSE00001787215.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2202 chr22 HAVANA CDS 18566203 18566498 . + 1 gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; exon_number 4; exon_id "ENSE00001787215.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2203 chr22 HAVANA exon 18567878 18568024 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; exon_number 5; exon_id "ENSE00001755511.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2204 chr22 HAVANA CDS 18567878 18568024 . + 2 gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; exon_number 5; exon_id "ENSE00001755511.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2205 chr22 HAVANA exon 18570738 18588162 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; exon_number 6; exon_id "ENSE00001596915.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2206 chr22 HAVANA CDS 18570738 18570838 . + 2 gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; exon_number 6; exon_id "ENSE00001596915.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2207 chr22 HAVANA stop_codon 18570839 18570841 . + 0 gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; exon_number 6; exon_id "ENSE00001596915.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2208 chr22 HAVANA UTR 18560689 18560813 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2209 chr22 HAVANA UTR 18561062 18561142 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2210 chr22 HAVANA UTR 18570839 18588162 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000329627.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314644.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2211 chr22 HAVANA transcript 18560774 18571226 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2212 chr22 HAVANA exon 18560774 18561372 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; exon_number 1; exon_id "ENSE00001813110.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2213 chr22 HAVANA CDS 18561143 18561372 . + 0 gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; exon_number 1; exon_id "ENSE00001813110.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2214 chr22 HAVANA start_codon 18561143 18561145 . + 0 gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; exon_number 1; exon_id "ENSE00001813110.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2215 chr22 HAVANA exon 18562640 18562780 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; exon_number 2; exon_id "ENSE00001672140.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2216 chr22 HAVANA CDS 18562640 18562780 . + 1 gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; exon_number 2; exon_id "ENSE00001672140.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2217 chr22 HAVANA exon 18566203 18566498 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; exon_number 3; exon_id "ENSE00001787215.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2218 chr22 HAVANA CDS 18566203 18566498 . + 1 gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; exon_number 3; exon_id "ENSE00001787215.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2219 chr22 HAVANA exon 18567878 18568024 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; exon_number 4; exon_id "ENSE00001755511.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2220 chr22 HAVANA CDS 18567878 18568024 . + 2 gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; exon_number 4; exon_id "ENSE00001755511.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2221 chr22 HAVANA exon 18570738 18571226 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; exon_number 5; exon_id "ENSE00001906999.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2222 chr22 HAVANA CDS 18570738 18570838 . + 2 gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; exon_number 5; exon_id "ENSE00001906999.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2223 chr22 HAVANA stop_codon 18570839 18570841 . + 0 gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; exon_number 5; exon_id "ENSE00001906999.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2224 chr22 HAVANA UTR 18560774 18561142 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2225 chr22 HAVANA UTR 18570839 18571226 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000399744.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PEX26-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13750.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2226 chr22 HAVANA transcript 18560781 18613905 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2227 chr22 HAVANA exon 18560781 18561372 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; exon_number 1; exon_id "ENSE00001832215.1"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2228 chr22 HAVANA CDS 18561143 18561372 . + 0 gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; exon_number 1; exon_id "ENSE00001832215.1"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2229 chr22 HAVANA start_codon 18561143 18561145 . + 0 gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; exon_number 1; exon_id "ENSE00001832215.1"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2230 chr22 HAVANA exon 18562640 18562780 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; exon_number 2; exon_id "ENSE00001672140.1"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2231 chr22 HAVANA CDS 18562640 18562780 . + 1 gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; exon_number 2; exon_id "ENSE00001672140.1"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2232 chr22 HAVANA exon 18604246 18604468 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; exon_number 3; exon_id "ENSE00003679760.1"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2233 chr22 HAVANA CDS 18604246 18604441 . + 1 gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; exon_number 3; exon_id "ENSE00003679760.1"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2234 chr22 HAVANA stop_codon 18604442 18604444 . + 0 gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; exon_number 3; exon_id "ENSE00003679760.1"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2235 chr22 HAVANA exon 18606923 18607071 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; exon_number 4; exon_id "ENSE00003519222.1"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2236 chr22 HAVANA exon 18609121 18609801 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; exon_number 5; exon_id "ENSE00003596502.1"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2237 chr22 HAVANA exon 18613610 18613905 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; exon_number 6; exon_id "ENSE00001599830.2"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2238 chr22 HAVANA UTR 18560781 18561142 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2239 chr22 HAVANA UTR 18604442 18604468 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2240 chr22 HAVANA UTR 18606923 18607071 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2241 chr22 HAVANA UTR 18609121 18609801 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2242 chr22 HAVANA UTR 18613610 18613905 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000474897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PEX26-004"; level 2; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000316267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2243 chr22 HAVANA transcript 18561143 18570885 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000428061.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PEX26-003"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS56221.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2244 chr22 HAVANA exon 18561143 18561372 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000428061.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PEX26-003"; exon_number 1; exon_id "ENSE00001539960.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS56221.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2245 chr22 HAVANA CDS 18561143 18561372 . + 0 gene_id "ENSG00000215193.8"; transcript_id "ENST00000428061.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PEX26-003"; exon_number 1; exon_id "ENSE00001539960.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS56221.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2246 chr22 HAVANA start_codon 18561143 18561145 . + 0 gene_id "ENSG00000215193.8"; transcript_id "ENST00000428061.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PEX26-003"; exon_number 1; exon_id "ENSE00001539960.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS56221.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2247 chr22 HAVANA exon 18562640 18562780 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000428061.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PEX26-003"; exon_number 2; exon_id "ENSE00001672140.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS56221.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2248 chr22 HAVANA CDS 18562640 18562780 . + 1 gene_id "ENSG00000215193.8"; transcript_id "ENST00000428061.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PEX26-003"; exon_number 2; exon_id "ENSE00001672140.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS56221.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2249 chr22 HAVANA exon 18566203 18566498 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000428061.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PEX26-003"; exon_number 3; exon_id "ENSE00001787215.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS56221.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2250 chr22 HAVANA CDS 18566203 18566498 . + 1 gene_id "ENSG00000215193.8"; transcript_id "ENST00000428061.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PEX26-003"; exon_number 3; exon_id "ENSE00001787215.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS56221.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2251 chr22 HAVANA exon 18570738 18570885 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000428061.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PEX26-003"; exon_number 4; exon_id "ENSE00001918090.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS56221.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2252 chr22 HAVANA CDS 18570738 18570838 . + 2 gene_id "ENSG00000215193.8"; transcript_id "ENST00000428061.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PEX26-003"; exon_number 4; exon_id "ENSE00001918090.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS56221.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2253 chr22 HAVANA stop_codon 18570839 18570841 . + 0 gene_id "ENSG00000215193.8"; transcript_id "ENST00000428061.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PEX26-003"; exon_number 4; exon_id "ENSE00001918090.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS56221.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2254 chr22 HAVANA UTR 18570839 18570885 . + . gene_id "ENSG00000215193.8"; transcript_id "ENST00000428061.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PEX26"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PEX26-003"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS56221.1"; havana_gene "OTTHUMG00000149970.5"; havana_transcript "OTTHUMT00000314646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2255 chr22 HAVANA gene 18564232 18564441 . - . gene_id "ENSG00000236890.2"; transcript_id "ENSG00000236890.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B476C20.11"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.11"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150070.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2256 chr22 HAVANA transcript 18564232 18564441 . - . gene_id "ENSG00000236890.2"; transcript_id "ENST00000427227.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B476C20.11"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.11-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150070.2"; havana_transcript "OTTHUMT00000316098.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2257 chr22 HAVANA exon 18564232 18564441 . - . gene_id "ENSG00000236890.2"; transcript_id "ENST00000427227.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B476C20.11"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.11-001"; exon_number 1; exon_id "ENSE00001666104.2"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150070.2"; havana_transcript "OTTHUMT00000316098.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2258 chr22 HAVANA gene 18584378 18584654 . + . gene_id "ENSG00000235617.1"; transcript_id "ENSG00000235617.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B476C20.10"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.10"; level 2; havana_gene "OTTHUMG00000150060.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2259 chr22 HAVANA transcript 18584378 18584654 . + . gene_id "ENSG00000235617.1"; transcript_id "ENST00000450866.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B476C20.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.10-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150060.1"; havana_transcript "OTTHUMT00000316073.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2260 chr22 HAVANA exon 18584378 18584654 . + . gene_id "ENSG00000235617.1"; transcript_id "ENST00000450866.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B476C20.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B476C20.10-001"; exon_number 1; exon_id "ENSE00001677677.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150060.1"; havana_transcript "OTTHUMT00000316073.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2261 chr22 HAVANA gene 18585223 18586415 . - . gene_id "ENSG00000225225.1"; transcript_id "ENSG00000225225.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ARL2BPP10"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "ARL2BPP10"; level 2; havana_gene "OTTHUMG00000155640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2262 chr22 HAVANA transcript 18585223 18586415 . - . gene_id "ENSG00000225225.1"; transcript_id "ENST00000446487.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ARL2BPP10"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ARL2BPP10-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000155640.1"; havana_transcript "OTTHUMT00000340946.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2263 chr22 HAVANA exon 18586223 18586415 . - . gene_id "ENSG00000225225.1"; transcript_id "ENST00000446487.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ARL2BPP10"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ARL2BPP10-001"; exon_number 1; exon_id "ENSE00001706316.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000155640.1"; havana_transcript "OTTHUMT00000340946.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2264 chr22 HAVANA exon 18585223 18585560 . - . gene_id "ENSG00000225225.1"; transcript_id "ENST00000446487.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ARL2BPP10"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ARL2BPP10-001"; exon_number 2; exon_id "ENSE00001780732.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000155640.1"; havana_transcript "OTTHUMT00000340946.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2265 chr22 HAVANA gene 18593097 18629321 . + . gene_id "ENSG00000183785.10"; transcript_id "ENSG00000183785.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8"; level 1; havana_gene "OTTHUMG00000150097.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2266 chr22 HAVANA transcript 18593097 18607035 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000426208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-004"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2267 chr22 HAVANA exon 18593097 18593342 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000426208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-004"; exon_number 1; exon_id "ENSE00001779322.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2268 chr22 HAVANA exon 18604246 18604468 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000426208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-004"; exon_number 2; exon_id "ENSE00003630776.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2269 chr22 HAVANA CDS 18604441 18604468 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000426208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-004"; exon_number 2; exon_id "ENSE00003630776.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2270 chr22 HAVANA start_codon 18604441 18604443 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000426208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-004"; exon_number 2; exon_id "ENSE00003630776.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2271 chr22 HAVANA exon 18606923 18607035 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000426208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-004"; exon_number 3; exon_id "ENSE00001676399.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2272 chr22 HAVANA CDS 18606923 18607035 . + 2 gene_id "ENSG00000183785.10"; transcript_id "ENST00000426208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-004"; exon_number 3; exon_id "ENSE00001676399.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2273 chr22 HAVANA UTR 18593097 18593342 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000426208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-004"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2274 chr22 HAVANA UTR 18604246 18604440 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000426208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-004"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2275 chr22 HAVANA transcript 18593453 18613921 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2276 chr22 HAVANA exon 18593453 18593605 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; exon_number 1; exon_id "ENSE00001331009.5"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2277 chr22 HAVANA exon 18604246 18604468 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; exon_number 2; exon_id "ENSE00003630776.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2278 chr22 HAVANA CDS 18604441 18604468 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; exon_number 2; exon_id "ENSE00003630776.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2279 chr22 HAVANA start_codon 18604441 18604443 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; exon_number 2; exon_id "ENSE00003630776.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2280 chr22 HAVANA exon 18606923 18607071 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; exon_number 3; exon_id "ENSE00003585148.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2281 chr22 HAVANA CDS 18606923 18607071 . + 2 gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; exon_number 3; exon_id "ENSE00003585148.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2282 chr22 HAVANA exon 18609121 18609801 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; exon_number 4; exon_id "ENSE00003570829.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2283 chr22 HAVANA CDS 18609121 18609801 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; exon_number 4; exon_id "ENSE00003570829.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2284 chr22 HAVANA exon 18613610 18613921 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; exon_number 5; exon_id "ENSE00001494806.2"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2285 chr22 HAVANA CDS 18613610 18613900 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; exon_number 5; exon_id "ENSE00001494806.2"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2286 chr22 HAVANA stop_codon 18613901 18613903 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; exon_number 5; exon_id "ENSE00001494806.2"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2287 chr22 HAVANA UTR 18593453 18593605 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2288 chr22 HAVANA UTR 18604246 18604440 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2289 chr22 HAVANA UTR 18613901 18613921 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000316027.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-002"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54495.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316233.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2290 chr22 HAVANA transcript 18593559 18614498 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2291 chr22 HAVANA exon 18593559 18593634 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; exon_number 1; exon_id "ENSE00001539912.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2292 chr22 HAVANA CDS 18593632 18593634 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; exon_number 1; exon_id "ENSE00001539912.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2293 chr22 HAVANA start_codon 18593632 18593634 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; exon_number 1; exon_id "ENSE00001539912.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2294 chr22 HAVANA exon 18604246 18604468 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; exon_number 2; exon_id "ENSE00003566581.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2295 chr22 HAVANA CDS 18604246 18604468 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; exon_number 2; exon_id "ENSE00003566581.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2296 chr22 HAVANA exon 18606923 18607071 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; exon_number 3; exon_id "ENSE00003585148.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2297 chr22 HAVANA CDS 18606923 18607071 . + 2 gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; exon_number 3; exon_id "ENSE00003585148.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2298 chr22 HAVANA exon 18609121 18609801 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; exon_number 4; exon_id "ENSE00003570829.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2299 chr22 HAVANA CDS 18609121 18609801 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; exon_number 4; exon_id "ENSE00003570829.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2300 chr22 HAVANA exon 18613610 18614498 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; exon_number 5; exon_id "ENSE00001539883.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2301 chr22 HAVANA CDS 18613610 18613900 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; exon_number 5; exon_id "ENSE00001539883.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2302 chr22 HAVANA stop_codon 18613901 18613903 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; exon_number 5; exon_id "ENSE00001539883.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2303 chr22 HAVANA UTR 18593559 18593631 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2304 chr22 HAVANA UTR 18613901 18614498 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000330423.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TUBA8-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13751.1"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316232.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2305 chr22 HAVANA transcript 18603874 18613884 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000416740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2306 chr22 HAVANA exon 18603874 18604468 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000416740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-003"; exon_number 1; exon_id "ENSE00001766585.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2307 chr22 HAVANA CDS 18604171 18604468 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000416740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-003"; exon_number 1; exon_id "ENSE00001766585.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2308 chr22 HAVANA start_codon 18604171 18604173 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000416740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-003"; exon_number 1; exon_id "ENSE00001766585.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2309 chr22 HAVANA exon 18606923 18607071 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000416740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-003"; exon_number 2; exon_id "ENSE00003585148.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2310 chr22 HAVANA CDS 18606923 18607071 . + 2 gene_id "ENSG00000183785.10"; transcript_id "ENST00000416740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-003"; exon_number 2; exon_id "ENSE00003585148.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2311 chr22 HAVANA exon 18609121 18609801 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000416740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-003"; exon_number 3; exon_id "ENSE00003570829.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2312 chr22 HAVANA CDS 18609121 18609801 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000416740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-003"; exon_number 3; exon_id "ENSE00003570829.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2313 chr22 HAVANA exon 18613610 18613884 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000416740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-003"; exon_number 4; exon_id "ENSE00001601849.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2314 chr22 HAVANA CDS 18613610 18613884 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000416740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-003"; exon_number 4; exon_id "ENSE00001601849.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2315 chr22 HAVANA UTR 18603874 18604170 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000416740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000316268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2316 chr22 HAVANA transcript 18609474 18629321 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000608634.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000472250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2317 chr22 HAVANA exon 18609474 18609801 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000608634.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-005"; exon_number 1; exon_id "ENSE00003704038.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000472250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2318 chr22 HAVANA CDS 18609474 18609801 . + 1 gene_id "ENSG00000183785.10"; transcript_id "ENST00000608634.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-005"; exon_number 1; exon_id "ENSE00003704038.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000472250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2319 chr22 HAVANA exon 18613610 18613773 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000608634.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-005"; exon_number 2; exon_id "ENSE00003703632.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000472250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2320 chr22 HAVANA CDS 18613610 18613773 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000608634.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-005"; exon_number 2; exon_id "ENSE00003703632.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000472250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2321 chr22 HAVANA exon 18628423 18629321 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000608634.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-005"; exon_number 3; exon_id "ENSE00003709937.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000472250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2322 chr22 HAVANA CDS 18628423 18628753 . + 1 gene_id "ENSG00000183785.10"; transcript_id "ENST00000608634.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-005"; exon_number 3; exon_id "ENSE00003709937.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000472250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2323 chr22 HAVANA stop_codon 18628754 18628756 . + 0 gene_id "ENSG00000183785.10"; transcript_id "ENST00000608634.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-005"; exon_number 3; exon_id "ENSE00003709937.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000472250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2324 chr22 HAVANA UTR 18628754 18629321 . + . gene_id "ENSG00000183785.10"; transcript_id "ENST00000608634.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TUBA8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TUBA8-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150097.4"; havana_transcript "OTTHUMT00000472250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2325 chr22 HAVANA gene 18632666 18660164 . + . gene_id "ENSG00000184979.9"; transcript_id "ENSG00000184979.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18"; level 2; havana_gene "OTTHUMG00000150104.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2326 chr22 HAVANA transcript 18632666 18660164 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2327 chr22 HAVANA exon 18632666 18632989 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 1; exon_id "ENSE00001301995.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2328 chr22 HAVANA exon 18640325 18640587 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 2; exon_id "ENSE00001325029.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2329 chr22 HAVANA CDS 18640431 18640587 . + 0 gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 2; exon_id "ENSE00001325029.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2330 chr22 HAVANA start_codon 18640431 18640433 . + 0 gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 2; exon_id "ENSE00001325029.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2331 chr22 HAVANA exon 18642939 18643035 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 3; exon_id "ENSE00001786824.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2332 chr22 HAVANA CDS 18642939 18643035 . + 2 gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 3; exon_id "ENSE00001786824.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2333 chr22 HAVANA exon 18644557 18644702 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 4; exon_id "ENSE00000650514.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2334 chr22 HAVANA CDS 18644557 18644702 . + 1 gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 4; exon_id "ENSE00000650514.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2335 chr22 HAVANA exon 18650022 18650101 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 5; exon_id "ENSE00001598455.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2336 chr22 HAVANA CDS 18650022 18650101 . + 2 gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 5; exon_id "ENSE00001598455.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2337 chr22 HAVANA exon 18650657 18650803 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 6; exon_id "ENSE00001757748.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2338 chr22 HAVANA CDS 18650657 18650803 . + 0 gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 6; exon_id "ENSE00001757748.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2339 chr22 HAVANA exon 18652611 18652706 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 7; exon_id "ENSE00001714040.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2340 chr22 HAVANA CDS 18652611 18652706 . + 0 gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 7; exon_id "ENSE00001714040.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2341 chr22 HAVANA exon 18653520 18653687 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 8; exon_id "ENSE00001765359.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2342 chr22 HAVANA CDS 18653520 18653687 . + 0 gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 8; exon_id "ENSE00001765359.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2343 chr22 HAVANA exon 18655917 18656048 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 9; exon_id "ENSE00001651074.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2344 chr22 HAVANA CDS 18655917 18656048 . + 0 gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 9; exon_id "ENSE00001651074.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2345 chr22 HAVANA exon 18656560 18656609 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 10; exon_id "ENSE00001648315.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2346 chr22 HAVANA CDS 18656560 18656609 . + 0 gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 10; exon_id "ENSE00001648315.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2347 chr22 HAVANA exon 18659539 18660164 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 11; exon_id "ENSE00001371235.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2348 chr22 HAVANA CDS 18659539 18659581 . + 1 gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 11; exon_id "ENSE00001371235.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2349 chr22 HAVANA stop_codon 18659582 18659584 . + 0 gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; exon_number 11; exon_id "ENSE00001371235.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2350 chr22 HAVANA UTR 18632666 18632989 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2351 chr22 HAVANA UTR 18640325 18640430 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2352 chr22 HAVANA UTR 18659582 18660164 . + . gene_id "ENSG00000184979.9"; transcript_id "ENST00000215794.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP18"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP18-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13752.1"; havana_gene "OTTHUMG00000150104.1"; havana_transcript "OTTHUMT00000316368.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2353 chr22 HAVANA gene 18660805 18688682 . - . gene_id "ENSG00000187979.4"; transcript_id "ENSG00000187979.4"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC008079.9"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AC008079.9"; level 2; havana_gene "OTTHUMG00000150103.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2354 chr22 HAVANA transcript 18660805 18688682 . - . gene_id "ENSG00000187979.4"; transcript_id "ENST00000434390.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC008079.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC008079.9-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150103.2"; havana_transcript "OTTHUMT00000316367.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2355 chr22 HAVANA exon 18688542 18688682 . - . gene_id "ENSG00000187979.4"; transcript_id "ENST00000434390.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC008079.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC008079.9-001"; exon_number 1; exon_id "ENSE00001721880.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150103.2"; havana_transcript "OTTHUMT00000316367.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2356 chr22 HAVANA exon 18682450 18682508 . - . gene_id "ENSG00000187979.4"; transcript_id "ENST00000434390.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC008079.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC008079.9-001"; exon_number 2; exon_id "ENSE00003295032.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150103.2"; havana_transcript "OTTHUMT00000316367.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2357 chr22 HAVANA exon 18681957 18681981 . - . gene_id "ENSG00000187979.4"; transcript_id "ENST00000434390.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC008079.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC008079.9-001"; exon_number 3; exon_id "ENSE00003429735.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150103.2"; havana_transcript "OTTHUMT00000316367.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2358 chr22 HAVANA exon 18678924 18679010 . - . gene_id "ENSG00000187979.4"; transcript_id "ENST00000434390.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC008079.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC008079.9-001"; exon_number 4; exon_id "ENSE00003454115.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150103.2"; havana_transcript "OTTHUMT00000316367.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2359 chr22 HAVANA exon 18673950 18674015 . - . gene_id "ENSG00000187979.4"; transcript_id "ENST00000434390.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC008079.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC008079.9-001"; exon_number 5; exon_id "ENSE00003289339.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150103.2"; havana_transcript "OTTHUMT00000316367.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2360 chr22 HAVANA exon 18671889 18671950 . - . gene_id "ENSG00000187979.4"; transcript_id "ENST00000434390.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC008079.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC008079.9-001"; exon_number 6; exon_id "ENSE00003398880.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150103.2"; havana_transcript "OTTHUMT00000316367.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2361 chr22 HAVANA exon 18671390 18671423 . - . gene_id "ENSG00000187979.4"; transcript_id "ENST00000434390.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC008079.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC008079.9-001"; exon_number 7; exon_id "ENSE00003311745.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150103.2"; havana_transcript "OTTHUMT00000316367.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2362 chr22 HAVANA exon 18665877 18666833 . - . gene_id "ENSG00000187979.4"; transcript_id "ENST00000434390.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC008079.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC008079.9-001"; exon_number 8; exon_id "ENSE00003455116.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150103.2"; havana_transcript "OTTHUMT00000316367.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2363 chr22 HAVANA exon 18660805 18661232 . - . gene_id "ENSG00000187979.4"; transcript_id "ENST00000434390.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC008079.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC008079.9-001"; exon_number 9; exon_id "ENSE00001766364.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150103.2"; havana_transcript "OTTHUMT00000316367.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2364 chr22 ENSEMBL gene 18721427 18745407 . + . gene_id "ENSG00000182824.6"; transcript_id "ENSG00000182824.6"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2365 chr22 ENSEMBL transcript 18721427 18745407 . + . gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2366 chr22 ENSEMBL exon 18721427 18721567 . + . gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 1; exon_id "ENSE00002220770.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2367 chr22 ENSEMBL CDS 18721540 18721567 . + 0 gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 1; exon_id "ENSE00002220770.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2368 chr22 ENSEMBL start_codon 18721540 18721542 . + 0 gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 1; exon_id "ENSE00002220770.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2369 chr22 ENSEMBL exon 18723545 18723603 . + . gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 2; exon_id "ENSE00001596564.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2370 chr22 ENSEMBL CDS 18723545 18723603 . + 2 gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 2; exon_id "ENSE00001596564.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2371 chr22 ENSEMBL exon 18724072 18724096 . + . gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 3; exon_id "ENSE00001763149.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2372 chr22 ENSEMBL CDS 18724072 18724096 . + 0 gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 3; exon_id "ENSE00001763149.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2373 chr22 ENSEMBL exon 18727043 18727129 . + . gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 4; exon_id "ENSE00001670476.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2374 chr22 ENSEMBL CDS 18727043 18727129 . + 2 gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 4; exon_id "ENSE00001670476.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2375 chr22 ENSEMBL exon 18732023 18732088 . + . gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 5; exon_id "ENSE00001729746.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2376 chr22 ENSEMBL CDS 18732023 18732088 . + 2 gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 5; exon_id "ENSE00001729746.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2377 chr22 ENSEMBL exon 18734087 18734148 . + . gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 6; exon_id "ENSE00001693656.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2378 chr22 ENSEMBL CDS 18734087 18734148 . + 2 gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 6; exon_id "ENSE00001693656.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2379 chr22 ENSEMBL exon 18734614 18734647 . + . gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 7; exon_id "ENSE00001744915.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2380 chr22 ENSEMBL CDS 18734614 18734647 . + 0 gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 7; exon_id "ENSE00001744915.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2381 chr22 ENSEMBL exon 18739382 18740338 . + . gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 8; exon_id "ENSE00001642671.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2382 chr22 ENSEMBL CDS 18739382 18739401 . + 2 gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 8; exon_id "ENSE00001642671.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2383 chr22 ENSEMBL stop_codon 18739402 18739404 . + 0 gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 8; exon_id "ENSE00001642671.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2384 chr22 ENSEMBL exon 18744980 18745407 . + . gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; exon_number 9; exon_id "ENSE00001608479.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2385 chr22 ENSEMBL UTR 18721427 18721539 . + . gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2386 chr22 ENSEMBL UTR 18739402 18740338 . + . gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2387 chr22 ENSEMBL UTR 18744980 18745407 . + . gene_id "ENSG00000182824.6"; transcript_id "ENST00000342888.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.1-201"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2388 chr22 HAVANA gene 18761178 18830912 . - . gene_id "ENSG00000197421.5"; transcript_id "ENSG00000197421.5"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "GGT3P"; level 2; havana_gene "OTTHUMG00000150161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2389 chr22 HAVANA transcript 18761178 18792992 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2390 chr22 HAVANA exon 18792942 18792992 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 1; exon_id "ENSE00001617398.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2391 chr22 HAVANA exon 18781926 18782304 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 2; exon_id "ENSE00001742887.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2392 chr22 HAVANA exon 18779775 18779846 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 3; exon_id "ENSE00001631812.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2393 chr22 HAVANA exon 18779481 18779567 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 4; exon_id "ENSE00001736105.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2394 chr22 HAVANA exon 18779286 18779362 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 5; exon_id "ENSE00001670341.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2395 chr22 HAVANA exon 18778572 18778739 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 6; exon_id "ENSE00001687715.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2396 chr22 HAVANA exon 18769652 18769844 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 7; exon_id "ENSE00001781791.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2397 chr22 HAVANA exon 18769102 18769259 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 8; exon_id "ENSE00001659837.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2398 chr22 HAVANA exon 18766903 18767052 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 9; exon_id "ENSE00001591378.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2399 chr22 HAVANA exon 18766243 18766379 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 10; exon_id "ENSE00001710412.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2400 chr22 HAVANA exon 18762555 18762764 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 11; exon_id "ENSE00001634322.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2401 chr22 HAVANA exon 18762196 18762322 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 12; exon_id "ENSE00001655097.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2402 chr22 HAVANA exon 18761981 18762093 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 13; exon_id "ENSE00001732917.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2403 chr22 HAVANA exon 18761786 18761899 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 14; exon_id "ENSE00001745497.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2404 chr22 HAVANA exon 18761178 18761481 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000412448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-002"; exon_number 15; exon_id "ENSE00001619940.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341281.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2405 chr22 HAVANA transcript 18761338 18778736 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000453783.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GGT3P-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000316629.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2406 chr22 HAVANA exon 18778572 18778736 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000453783.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GGT3P-001"; exon_number 1; exon_id "ENSE00001776499.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000316629.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2407 chr22 HAVANA exon 18775258 18775393 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000453783.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GGT3P-001"; exon_number 2; exon_id "ENSE00001748860.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000316629.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2408 chr22 HAVANA exon 18775044 18775130 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000453783.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GGT3P-001"; exon_number 3; exon_id "ENSE00001617235.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000316629.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2409 chr22 HAVANA exon 18769652 18769844 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000453783.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GGT3P-001"; exon_number 4; exon_id "ENSE00001781791.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000316629.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2410 chr22 HAVANA exon 18769102 18769259 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000453783.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GGT3P-001"; exon_number 5; exon_id "ENSE00001659837.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000316629.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2411 chr22 HAVANA exon 18766903 18767052 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000453783.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GGT3P-001"; exon_number 6; exon_id "ENSE00001591378.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000316629.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2412 chr22 HAVANA exon 18766243 18766379 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000453783.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GGT3P-001"; exon_number 7; exon_id "ENSE00001710412.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000316629.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2413 chr22 HAVANA exon 18762555 18762745 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000453783.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GGT3P-001"; exon_number 8; exon_id "ENSE00001775491.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000316629.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2414 chr22 HAVANA exon 18762196 18762271 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000453783.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GGT3P-001"; exon_number 9; exon_id "ENSE00001717151.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000316629.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2415 chr22 HAVANA exon 18761981 18762093 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000453783.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GGT3P-001"; exon_number 10; exon_id "ENSE00001732917.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000316629.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2416 chr22 HAVANA exon 18761786 18761899 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000453783.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GGT3P-001"; exon_number 11; exon_id "ENSE00001745497.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000316629.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2417 chr22 HAVANA exon 18761338 18761481 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000453783.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GGT3P-001"; exon_number 12; exon_id "ENSE00001703049.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000316629.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2418 chr22 HAVANA transcript 18782044 18830912 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000445651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-003"; level 2; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341282.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2419 chr22 HAVANA exon 18830806 18830912 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000445651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-003"; exon_number 1; exon_id "ENSE00001776054.1"; level 2; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341282.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2420 chr22 HAVANA exon 18782044 18782304 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000445651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-003"; exon_number 2; exon_id "ENSE00001704852.1"; level 2; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341282.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2421 chr22 HAVANA transcript 18782111 18812514 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000430306.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-004"; level 2; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341283.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2422 chr22 HAVANA exon 18812441 18812514 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000430306.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-004"; exon_number 1; exon_id "ENSE00001730815.1"; level 2; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341283.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2423 chr22 HAVANA exon 18782111 18782304 . - . gene_id "ENSG00000197421.5"; transcript_id "ENST00000430306.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GGT3P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT3P-004"; exon_number 2; exon_id "ENSE00001659555.1"; level 2; havana_gene "OTTHUMG00000150161.2"; havana_transcript "OTTHUMT00000341283.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2424 chr22 HAVANA gene 18781927 18782317 . - . gene_id "ENSG00000239989.1"; transcript_id "ENSG00000239989.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC008132.14"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC008132.14"; level 2; havana_gene "OTTHUMG00000155694.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2425 chr22 HAVANA transcript 18781927 18782317 . - . gene_id "ENSG00000239989.1"; transcript_id "ENST00000437537.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC008132.14"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC008132.14-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000155694.1"; havana_transcript "OTTHUMT00000341280.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2426 chr22 HAVANA exon 18781927 18782317 . - . gene_id "ENSG00000239989.1"; transcript_id "ENST00000437537.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC008132.14"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC008132.14-001"; exon_number 1; exon_id "ENSE00001666250.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000155694.1"; havana_transcript "OTTHUMT00000341280.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2427 chr22 HAVANA gene 18821207 18821951 . + . gene_id "ENSG00000234764.2"; transcript_id "ENSG00000234764.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC008132.12"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC008132.12"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150178.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2428 chr22 HAVANA transcript 18821207 18821951 . + . gene_id "ENSG00000234764.2"; transcript_id "ENST00000428850.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC008132.12"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC008132.12-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150178.2"; havana_transcript "OTTHUMT00000316715.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2429 chr22 HAVANA exon 18821207 18821951 . + . gene_id "ENSG00000234764.2"; transcript_id "ENST00000428850.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC008132.12"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC008132.12-001"; exon_number 1; exon_id "ENSE00001693782.2"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150178.2"; havana_transcript "OTTHUMT00000316715.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2430 chr22 HAVANA gene 18834324 18848562 . + . gene_id "ENSG00000161103.7"; transcript_id "ENSG00000161103.7"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.13"; level 2; havana_gene "OTTHUMG00000150176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2431 chr22 HAVANA transcript 18834324 18839322 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000342005.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.13-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000316711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2432 chr22 HAVANA exon 18834324 18835839 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000342005.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.13-001"; exon_number 1; exon_id "ENSE00001662380.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000316711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2433 chr22 HAVANA CDS 18834445 18835830 . + 0 gene_id "ENSG00000161103.7"; transcript_id "ENST00000342005.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.13-001"; exon_number 1; exon_id "ENSE00001662380.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000316711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2434 chr22 HAVANA start_codon 18834445 18834447 . + 0 gene_id "ENSG00000161103.7"; transcript_id "ENST00000342005.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.13-001"; exon_number 1; exon_id "ENSE00001662380.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000316711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2435 chr22 HAVANA stop_codon 18835831 18835833 . + 0 gene_id "ENSG00000161103.7"; transcript_id "ENST00000342005.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.13-001"; exon_number 1; exon_id "ENSE00001662380.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000316711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2436 chr22 HAVANA exon 18839150 18839322 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000342005.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.13-001"; exon_number 2; exon_id "ENSE00001771590.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000316711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2437 chr22 HAVANA UTR 18834324 18834444 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000342005.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.13-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000316711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2438 chr22 HAVANA UTR 18835831 18835839 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000342005.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.13-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000316711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2439 chr22 HAVANA UTR 18839150 18839322 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000342005.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC008132.13-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000316711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2440 chr22 HAVANA transcript 18837631 18848562 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000412938.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC008132.13-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471615.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2441 chr22 HAVANA exon 18837631 18839356 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000412938.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC008132.13-002"; exon_number 1; exon_id "ENSE00001801253.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471615.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2442 chr22 HAVANA exon 18839732 18840107 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000412938.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC008132.13-002"; exon_number 2; exon_id "ENSE00001680845.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471615.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2443 chr22 HAVANA exon 18841163 18841268 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000412938.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC008132.13-002"; exon_number 3; exon_id "ENSE00001699529.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471615.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2444 chr22 HAVANA exon 18843303 18843431 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000412938.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC008132.13-002"; exon_number 4; exon_id "ENSE00001634861.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471615.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2445 chr22 HAVANA exon 18844088 18845002 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000412938.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC008132.13-002"; exon_number 5; exon_id "ENSE00001621364.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471615.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2446 chr22 HAVANA exon 18845895 18848562 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000412938.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC008132.13-002"; exon_number 6; exon_id "ENSE00001747339.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471615.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2447 chr22 HAVANA transcript 18839143 18844197 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000445398.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC008132.13-003"; level 2; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471616.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2448 chr22 HAVANA exon 18839143 18839356 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000445398.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC008132.13-003"; exon_number 1; exon_id "ENSE00001756302.1"; level 2; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471616.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2449 chr22 HAVANA exon 18841163 18841268 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000445398.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC008132.13-003"; exon_number 2; exon_id "ENSE00001699529.1"; level 2; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471616.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2450 chr22 HAVANA exon 18843303 18843431 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000445398.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC008132.13-003"; exon_number 3; exon_id "ENSE00001634861.1"; level 2; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471616.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2451 chr22 HAVANA exon 18844088 18844197 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000445398.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC008132.13-003"; exon_number 4; exon_id "ENSE00001624203.1"; level 2; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471616.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2452 chr22 HAVANA transcript 18840389 18842446 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000416498.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AC008132.13-004"; level 2; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471617.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2453 chr22 HAVANA exon 18840389 18840455 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000416498.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AC008132.13-004"; exon_number 1; exon_id "ENSE00001732200.1"; level 2; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471617.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2454 chr22 HAVANA exon 18841163 18841268 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000416498.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AC008132.13-004"; exon_number 2; exon_id "ENSE00001699529.1"; level 2; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471617.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2455 chr22 HAVANA exon 18842261 18842446 . + . gene_id "ENSG00000161103.7"; transcript_id "ENST00000416498.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC008132.13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AC008132.13-004"; exon_number 3; exon_id "ENSE00001744297.1"; level 2; havana_gene "OTTHUMG00000150176.2"; havana_transcript "OTTHUMT00000471617.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2456 chr22 HAVANA gene 18843134 18846153 . - . gene_id "ENSG00000215544.6"; transcript_id "ENSG00000215544.6"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP7"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP7"; level 2; havana_gene "OTTHUMG00000030708.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2457 chr22 HAVANA transcript 18843134 18846153 . - . gene_id "ENSG00000215544.6"; transcript_id "ENST00000511549.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP7-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000030708.4"; havana_transcript "OTTHUMT00000075596.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2458 chr22 HAVANA exon 18846014 18846153 . - . gene_id "ENSG00000215544.6"; transcript_id "ENST00000511549.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP7-001"; exon_number 1; exon_id "ENSE00002066327.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000030708.4"; havana_transcript "OTTHUMT00000075596.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2459 chr22 HAVANA exon 18844824 18844958 . - . gene_id "ENSG00000215544.6"; transcript_id "ENST00000511549.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP7-001"; exon_number 2; exon_id "ENSE00002037161.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000030708.4"; havana_transcript "OTTHUMT00000075596.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2460 chr22 HAVANA exon 18843773 18843878 . - . gene_id "ENSG00000215544.6"; transcript_id "ENST00000511549.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP7-001"; exon_number 3; exon_id "ENSE00002044334.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000030708.4"; havana_transcript "OTTHUMT00000075596.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2461 chr22 HAVANA exon 18843134 18843296 . - . gene_id "ENSG00000215544.6"; transcript_id "ENST00000511549.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP7-001"; exon_number 4; exon_id "ENSE00002069080.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000030708.4"; havana_transcript "OTTHUMT00000075596.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2462 chr22 HAVANA gene 18893541 18901751 . + . gene_id "ENSG00000183628.8"; transcript_id "ENSG00000183628.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6"; level 2; havana_gene "OTTHUMG00000150162.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2463 chr22 HAVANA transcript 18893541 18899601 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2464 chr22 HAVANA exon 18893541 18893627 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; exon_number 1; exon_id "ENSE00001636811.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2465 chr22 HAVANA exon 18894078 18894238 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; exon_number 2; exon_id "ENSE00003611901.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2466 chr22 HAVANA exon 18897685 18897785 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; exon_number 3; exon_id "ENSE00003522527.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2467 chr22 HAVANA exon 18898401 18898541 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; exon_number 4; exon_id "ENSE00003585126.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2468 chr22 HAVANA CDS 18898437 18898541 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; exon_number 4; exon_id "ENSE00003585126.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2469 chr22 HAVANA start_codon 18898437 18898439 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; exon_number 4; exon_id "ENSE00003585126.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2470 chr22 HAVANA exon 18899053 18899601 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; exon_number 5; exon_id "ENSE00001705371.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2471 chr22 HAVANA CDS 18899053 18899199 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; exon_number 5; exon_id "ENSE00001705371.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2472 chr22 HAVANA stop_codon 18899200 18899202 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; exon_number 5; exon_id "ENSE00001705371.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2473 chr22 HAVANA UTR 18893541 18893627 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2474 chr22 HAVANA UTR 18894078 18894238 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2475 chr22 HAVANA UTR 18897685 18897785 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2476 chr22 HAVANA UTR 18898401 18898436 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2477 chr22 HAVANA UTR 18899200 18899601 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000413981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316632.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2478 chr22 HAVANA transcript 18893736 18899601 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2479 chr22 HAVANA exon 18893736 18893997 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; exon_number 1; exon_id "ENSE00001782347.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2480 chr22 HAVANA CDS 18893888 18893997 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; exon_number 1; exon_id "ENSE00001782347.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2481 chr22 HAVANA start_codon 18893888 18893890 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; exon_number 1; exon_id "ENSE00001782347.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2482 chr22 HAVANA exon 18894078 18894238 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; exon_number 2; exon_id "ENSE00003530026.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2483 chr22 HAVANA CDS 18894078 18894238 . + 1 gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; exon_number 2; exon_id "ENSE00003530026.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2484 chr22 HAVANA exon 18897685 18897785 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; exon_number 3; exon_id "ENSE00003690027.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2485 chr22 HAVANA CDS 18897685 18897785 . + 2 gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; exon_number 3; exon_id "ENSE00003690027.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2486 chr22 HAVANA exon 18898401 18898541 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; exon_number 4; exon_id "ENSE00003687876.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2487 chr22 HAVANA CDS 18898401 18898541 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; exon_number 4; exon_id "ENSE00003687876.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2488 chr22 HAVANA exon 18899053 18899601 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; exon_number 5; exon_id "ENSE00001705371.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2489 chr22 HAVANA CDS 18899053 18899199 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; exon_number 5; exon_id "ENSE00001705371.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2490 chr22 HAVANA stop_codon 18899200 18899202 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; exon_number 5; exon_id "ENSE00001705371.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2491 chr22 HAVANA UTR 18893736 18893887 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2492 chr22 HAVANA UTR 18899200 18899601 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000331444.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13753.1"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316631.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2493 chr22 HAVANA transcript 18893838 18901751 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2494 chr22 HAVANA exon 18893838 18893980 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; exon_number 1; exon_id "ENSE00001593918.2"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2495 chr22 HAVANA CDS 18893888 18893980 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; exon_number 1; exon_id "ENSE00001593918.2"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2496 chr22 HAVANA start_codon 18893888 18893890 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; exon_number 1; exon_id "ENSE00001593918.2"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2497 chr22 HAVANA exon 18894078 18894238 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; exon_number 2; exon_id "ENSE00003619303.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2498 chr22 HAVANA CDS 18894078 18894238 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; exon_number 2; exon_id "ENSE00003619303.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2499 chr22 HAVANA exon 18897685 18897785 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; exon_number 3; exon_id "ENSE00003667348.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2500 chr22 HAVANA CDS 18897685 18897742 . + 1 gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; exon_number 3; exon_id "ENSE00003667348.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2501 chr22 HAVANA stop_codon 18897743 18897745 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; exon_number 3; exon_id "ENSE00003667348.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2502 chr22 HAVANA exon 18898401 18898541 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; exon_number 4; exon_id "ENSE00003517390.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2503 chr22 HAVANA exon 18899053 18901751 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; exon_number 5; exon_id "ENSE00001895769.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2504 chr22 HAVANA UTR 18893838 18893887 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2505 chr22 HAVANA UTR 18897743 18897785 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2506 chr22 HAVANA UTR 18898401 18898541 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2507 chr22 HAVANA UTR 18899053 18901751 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000483718.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-004"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316634.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2508 chr22 HAVANA transcript 18893864 18899595 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2509 chr22 HAVANA exon 18893864 18893997 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; exon_number 1; exon_id "ENSE00001759157.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2510 chr22 HAVANA CDS 18893888 18893997 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; exon_number 1; exon_id "ENSE00001759157.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2511 chr22 HAVANA start_codon 18893888 18893890 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; exon_number 1; exon_id "ENSE00001759157.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2512 chr22 HAVANA exon 18894078 18894238 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; exon_number 2; exon_id "ENSE00003530026.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2513 chr22 HAVANA CDS 18894078 18894238 . + 1 gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; exon_number 2; exon_id "ENSE00003530026.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2514 chr22 HAVANA exon 18897493 18897611 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; exon_number 3; exon_id "ENSE00001792030.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2515 chr22 HAVANA CDS 18897493 18897611 . + 2 gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; exon_number 3; exon_id "ENSE00001792030.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2516 chr22 HAVANA exon 18897685 18897785 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; exon_number 4; exon_id "ENSE00003514347.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2517 chr22 HAVANA CDS 18897685 18897780 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; exon_number 4; exon_id "ENSE00003514347.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2518 chr22 HAVANA stop_codon 18897781 18897783 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; exon_number 4; exon_id "ENSE00003514347.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2519 chr22 HAVANA exon 18898401 18898541 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; exon_number 5; exon_id "ENSE00003517390.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2520 chr22 HAVANA exon 18899053 18899595 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; exon_number 6; exon_id "ENSE00001729955.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2521 chr22 HAVANA UTR 18893864 18893887 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2522 chr22 HAVANA UTR 18897781 18897785 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2523 chr22 HAVANA UTR 18898401 18898541 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2524 chr22 HAVANA UTR 18899053 18899595 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000427407.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-006"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316636.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2525 chr22 HAVANA transcript 18893866 18895782 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000608842.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-008"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000472251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2526 chr22 HAVANA exon 18893866 18893997 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000608842.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-008"; exon_number 1; exon_id "ENSE00003703577.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000472251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2527 chr22 HAVANA CDS 18893888 18893997 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000608842.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-008"; exon_number 1; exon_id "ENSE00003703577.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000472251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2528 chr22 HAVANA start_codon 18893888 18893890 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000608842.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-008"; exon_number 1; exon_id "ENSE00003703577.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000472251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2529 chr22 HAVANA exon 18894078 18895782 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000608842.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-008"; exon_number 2; exon_id "ENSE00003709542.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000472251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2530 chr22 HAVANA CDS 18894078 18894399 . + 1 gene_id "ENSG00000183628.8"; transcript_id "ENST00000608842.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-008"; exon_number 2; exon_id "ENSE00003709542.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000472251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2531 chr22 HAVANA stop_codon 18894400 18894402 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000608842.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-008"; exon_number 2; exon_id "ENSE00003709542.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000472251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2532 chr22 HAVANA UTR 18893866 18893887 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000608842.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-008"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000472251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2533 chr22 HAVANA UTR 18894400 18895782 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000608842.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DGCR6-008"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000472251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2534 chr22 HAVANA transcript 18893868 18899600 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2535 chr22 HAVANA exon 18893868 18893997 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; exon_number 1; exon_id "ENSE00001666897.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2536 chr22 HAVANA CDS 18893888 18893997 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; exon_number 1; exon_id "ENSE00001666897.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2537 chr22 HAVANA start_codon 18893888 18893890 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; exon_number 1; exon_id "ENSE00001666897.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2538 chr22 HAVANA exon 18894078 18894599 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; exon_number 2; exon_id "ENSE00001619593.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2539 chr22 HAVANA CDS 18894078 18894399 . + 1 gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; exon_number 2; exon_id "ENSE00001619593.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2540 chr22 HAVANA stop_codon 18894400 18894402 . + 0 gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; exon_number 2; exon_id "ENSE00001619593.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2541 chr22 HAVANA exon 18897692 18897785 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; exon_number 3; exon_id "ENSE00001617179.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2542 chr22 HAVANA exon 18898401 18898541 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; exon_number 4; exon_id "ENSE00003517390.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2543 chr22 HAVANA exon 18899053 18899600 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; exon_number 5; exon_id "ENSE00001897433.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2544 chr22 HAVANA UTR 18893868 18893887 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2545 chr22 HAVANA UTR 18894400 18894599 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2546 chr22 HAVANA UTR 18897692 18897785 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2547 chr22 HAVANA UTR 18898401 18898541 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2548 chr22 HAVANA UTR 18899053 18899600 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000480608.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6-005"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2549 chr22 HAVANA transcript 18894294 18897902 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000477156.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR6-007"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000325201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2550 chr22 HAVANA exon 18894294 18894599 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000477156.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR6-007"; exon_number 1; exon_id "ENSE00001922156.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000325201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2551 chr22 HAVANA exon 18897685 18897902 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000477156.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR6-007"; exon_number 2; exon_id "ENSE00001939454.1"; level 2; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000325201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2552 chr22 HAVANA transcript 18896176 18899591 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000436645.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DGCR6-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2553 chr22 HAVANA exon 18896176 18896206 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000436645.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DGCR6-003"; exon_number 1; exon_id "ENSE00001661865.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2554 chr22 HAVANA exon 18897685 18897785 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000436645.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DGCR6-003"; exon_number 2; exon_id "ENSE00003522527.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2555 chr22 HAVANA exon 18898401 18898541 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000436645.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DGCR6-003"; exon_number 3; exon_id "ENSE00003517390.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2556 chr22 HAVANA exon 18899053 18899591 . + . gene_id "ENSG00000183628.8"; transcript_id "ENST00000436645.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DGCR6-003"; exon_number 4; exon_id "ENSE00001618523.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150162.4"; havana_transcript "OTTHUMT00000316633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2557 chr22 HAVANA gene 18900294 18924066 . - . gene_id "ENSG00000100033.12"; transcript_id "ENSG00000100033.12"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH"; level 2; havana_gene "OTTHUMG00000150163.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2558 chr22 HAVANA transcript 18900294 18923808 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000491604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-003"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316639.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2559 chr22 HAVANA exon 18923528 18923808 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000491604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-003"; exon_number 1; exon_id "ENSE00001700096.2"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316639.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2560 chr22 HAVANA exon 18918503 18918711 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000491604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-003"; exon_number 2; exon_id "ENSE00003669936.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316639.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2561 chr22 HAVANA exon 18913201 18913235 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000491604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-003"; exon_number 3; exon_id "ENSE00003497631.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316639.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2562 chr22 HAVANA exon 18912564 18912713 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000491604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-003"; exon_number 4; exon_id "ENSE00003524712.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316639.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2563 chr22 HAVANA exon 18910628 18910692 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000491604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-003"; exon_number 5; exon_id "ENSE00003690912.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316639.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2564 chr22 HAVANA exon 18910330 18910446 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000491604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-003"; exon_number 6; exon_id "ENSE00003571806.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316639.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2565 chr22 HAVANA exon 18908855 18909917 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000491604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-003"; exon_number 7; exon_id "ENSE00001838943.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316639.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2566 chr22 HAVANA exon 18907219 18907311 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000491604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-003"; exon_number 8; exon_id "ENSE00003539300.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316639.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2567 chr22 HAVANA exon 18906964 18907110 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000491604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-003"; exon_number 9; exon_id "ENSE00003650724.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316639.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2568 chr22 HAVANA exon 18905829 18906004 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000491604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-003"; exon_number 10; exon_id "ENSE00003613967.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316639.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2569 chr22 HAVANA exon 18904403 18904501 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000491604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-003"; exon_number 11; exon_id "ENSE00003594580.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316639.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2570 chr22 HAVANA exon 18900951 18901039 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000491604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-003"; exon_number 12; exon_id "ENSE00003506895.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316639.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2571 chr22 HAVANA exon 18900294 18900875 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000491604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-003"; exon_number 13; exon_id "ENSE00003528620.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316639.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2572 chr22 HAVANA transcript 18900294 18923809 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2573 chr22 HAVANA exon 18923683 18923809 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 1; exon_id "ENSE00001600695.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2574 chr22 HAVANA exon 18918503 18918694 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 2; exon_id "ENSE00001684942.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2575 chr22 HAVANA CDS 18918503 18918660 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 2; exon_id "ENSE00001684942.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2576 chr22 HAVANA start_codon 18918658 18918660 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 2; exon_id "ENSE00001684942.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2577 chr22 HAVANA exon 18913201 18913235 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 3; exon_id "ENSE00003609682.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2578 chr22 HAVANA CDS 18913201 18913235 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 3; exon_id "ENSE00003609682.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2579 chr22 HAVANA exon 18912564 18912713 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 4; exon_id "ENSE00003465975.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2580 chr22 HAVANA CDS 18912564 18912713 . - 2 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 4; exon_id "ENSE00003465975.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2581 chr22 HAVANA exon 18910628 18910692 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 5; exon_id "ENSE00003558751.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2582 chr22 HAVANA CDS 18910628 18910692 . - 2 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 5; exon_id "ENSE00003558751.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2583 chr22 HAVANA exon 18910330 18910446 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 6; exon_id "ENSE00003659586.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2584 chr22 HAVANA CDS 18910330 18910446 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 6; exon_id "ENSE00003659586.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2585 chr22 HAVANA exon 18909838 18909917 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 7; exon_id "ENSE00003610071.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2586 chr22 HAVANA CDS 18909838 18909917 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 7; exon_id "ENSE00003610071.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2587 chr22 HAVANA exon 18908855 18908936 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 8; exon_id "ENSE00003593423.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2588 chr22 HAVANA CDS 18908855 18908936 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 8; exon_id "ENSE00003593423.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2589 chr22 HAVANA exon 18907219 18907311 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 9; exon_id "ENSE00003609835.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2590 chr22 HAVANA CDS 18907219 18907311 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 9; exon_id "ENSE00003609835.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2591 chr22 HAVANA exon 18906964 18907110 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 10; exon_id "ENSE00003501304.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2592 chr22 HAVANA CDS 18906964 18907110 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 10; exon_id "ENSE00003501304.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2593 chr22 HAVANA exon 18905829 18906004 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 11; exon_id "ENSE00003471678.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2594 chr22 HAVANA CDS 18905829 18906004 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 11; exon_id "ENSE00003471678.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2595 chr22 HAVANA exon 18904403 18904501 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 12; exon_id "ENSE00003488051.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2596 chr22 HAVANA CDS 18904403 18904501 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 12; exon_id "ENSE00003488051.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2597 chr22 HAVANA exon 18900951 18901039 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 13; exon_id "ENSE00003635228.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2598 chr22 HAVANA CDS 18900951 18901039 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 13; exon_id "ENSE00003635228.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2599 chr22 HAVANA exon 18900294 18900875 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 14; exon_id "ENSE00003478205.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2600 chr22 HAVANA CDS 18900691 18900875 . - 2 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 14; exon_id "ENSE00003478205.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2601 chr22 HAVANA stop_codon 18900688 18900690 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; exon_number 14; exon_id "ENSE00003478205.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2602 chr22 HAVANA UTR 18923683 18923809 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2603 chr22 HAVANA UTR 18918661 18918694 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2604 chr22 HAVANA UTR 18900294 18900690 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000420436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2605 chr22 HAVANA transcript 18900295 18909087 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000313755.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-007"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316643.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2606 chr22 HAVANA exon 18907219 18909087 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000313755.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-007"; exon_number 1; exon_id "ENSE00001539647.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316643.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2607 chr22 HAVANA exon 18906964 18907110 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000313755.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-007"; exon_number 2; exon_id "ENSE00003650724.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316643.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2608 chr22 HAVANA exon 18905829 18906004 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000313755.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-007"; exon_number 3; exon_id "ENSE00003613967.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316643.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2609 chr22 HAVANA exon 18904403 18904501 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000313755.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-007"; exon_number 4; exon_id "ENSE00003594580.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316643.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2610 chr22 HAVANA exon 18900951 18901039 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000313755.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-007"; exon_number 5; exon_id "ENSE00003506895.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316643.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2611 chr22 HAVANA exon 18900295 18900875 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000313755.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-007"; exon_number 6; exon_id "ENSE00003676969.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316643.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2612 chr22 HAVANA transcript 18900295 18911515 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000429300.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-006"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2613 chr22 HAVANA exon 18910330 18911515 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000429300.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-006"; exon_number 1; exon_id "ENSE00001677639.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2614 chr22 HAVANA exon 18909838 18909917 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000429300.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-006"; exon_number 2; exon_id "ENSE00003559610.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2615 chr22 HAVANA exon 18908855 18908936 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000429300.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-006"; exon_number 3; exon_id "ENSE00003461908.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2616 chr22 HAVANA exon 18907219 18907311 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000429300.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-006"; exon_number 4; exon_id "ENSE00003539300.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2617 chr22 HAVANA exon 18906964 18907144 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000429300.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-006"; exon_number 5; exon_id "ENSE00001768311.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2618 chr22 HAVANA exon 18905829 18906004 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000429300.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-006"; exon_number 6; exon_id "ENSE00003613967.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2619 chr22 HAVANA exon 18904403 18904501 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000429300.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-006"; exon_number 7; exon_id "ENSE00003594580.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2620 chr22 HAVANA exon 18900951 18901039 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000429300.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-006"; exon_number 8; exon_id "ENSE00003506895.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2621 chr22 HAVANA exon 18900295 18900875 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000429300.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-006"; exon_number 9; exon_id "ENSE00003676969.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2622 chr22 HAVANA transcript 18900295 18923655 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000482858.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-005"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2623 chr22 HAVANA exon 18923528 18923655 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000482858.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-005"; exon_number 1; exon_id "ENSE00003497777.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2624 chr22 HAVANA exon 18918503 18918711 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000482858.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-005"; exon_number 2; exon_id "ENSE00003669936.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2625 chr22 HAVANA exon 18913201 18913235 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000482858.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-005"; exon_number 3; exon_id "ENSE00003497631.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2626 chr22 HAVANA exon 18912564 18912713 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000482858.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-005"; exon_number 4; exon_id "ENSE00003524712.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2627 chr22 HAVANA exon 18910330 18910692 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000482858.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-005"; exon_number 5; exon_id "ENSE00001876317.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2628 chr22 HAVANA exon 18907219 18909917 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000482858.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-005"; exon_number 6; exon_id "ENSE00001859105.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2629 chr22 HAVANA exon 18906964 18907110 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000482858.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-005"; exon_number 7; exon_id "ENSE00003650724.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2630 chr22 HAVANA exon 18905829 18906004 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000482858.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-005"; exon_number 8; exon_id "ENSE00003613967.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2631 chr22 HAVANA exon 18904403 18904501 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000482858.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-005"; exon_number 9; exon_id "ENSE00003594580.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2632 chr22 HAVANA exon 18900951 18901039 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000482858.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-005"; exon_number 10; exon_id "ENSE00003506895.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2633 chr22 HAVANA exon 18900295 18900875 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000482858.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-005"; exon_number 11; exon_id "ENSE00003676969.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2634 chr22 HAVANA transcript 18900295 18923964 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2635 chr22 HAVANA exon 18923903 18923964 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 1; exon_id "ENSE00001726816.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2636 chr22 HAVANA exon 18918503 18918711 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 2; exon_id "ENSE00003557788.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2637 chr22 HAVANA CDS 18918503 18918660 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 2; exon_id "ENSE00003557788.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2638 chr22 HAVANA start_codon 18918658 18918660 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 2; exon_id "ENSE00003557788.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2639 chr22 HAVANA exon 18913201 18913235 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 3; exon_id "ENSE00003609682.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2640 chr22 HAVANA CDS 18913201 18913235 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 3; exon_id "ENSE00003609682.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2641 chr22 HAVANA exon 18912564 18912713 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 4; exon_id "ENSE00003465975.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2642 chr22 HAVANA CDS 18912564 18912713 . - 2 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 4; exon_id "ENSE00003465975.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2643 chr22 HAVANA exon 18910628 18910692 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 5; exon_id "ENSE00003558751.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2644 chr22 HAVANA CDS 18910628 18910692 . - 2 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 5; exon_id "ENSE00003558751.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2645 chr22 HAVANA exon 18910330 18910446 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 6; exon_id "ENSE00003659586.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2646 chr22 HAVANA CDS 18910330 18910446 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 6; exon_id "ENSE00003659586.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2647 chr22 HAVANA exon 18909838 18909917 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 7; exon_id "ENSE00003610071.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2648 chr22 HAVANA CDS 18909838 18909917 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 7; exon_id "ENSE00003610071.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2649 chr22 HAVANA exon 18908855 18908936 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 8; exon_id "ENSE00003593423.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2650 chr22 HAVANA CDS 18908855 18908936 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 8; exon_id "ENSE00003593423.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2651 chr22 HAVANA exon 18907219 18907311 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 9; exon_id "ENSE00003609835.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2652 chr22 HAVANA CDS 18907219 18907311 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 9; exon_id "ENSE00003609835.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2653 chr22 HAVANA exon 18906964 18907110 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 10; exon_id "ENSE00003501304.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2654 chr22 HAVANA CDS 18906964 18907110 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 10; exon_id "ENSE00003501304.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2655 chr22 HAVANA exon 18905829 18906004 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 11; exon_id "ENSE00003471678.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2656 chr22 HAVANA CDS 18905829 18906004 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 11; exon_id "ENSE00003471678.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2657 chr22 HAVANA exon 18904403 18904501 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 12; exon_id "ENSE00003488051.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2658 chr22 HAVANA CDS 18904403 18904501 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 12; exon_id "ENSE00003488051.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2659 chr22 HAVANA exon 18900951 18901039 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 13; exon_id "ENSE00003635228.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2660 chr22 HAVANA CDS 18900951 18901039 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 13; exon_id "ENSE00003635228.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2661 chr22 HAVANA exon 18900295 18900875 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 14; exon_id "ENSE00003542757.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2662 chr22 HAVANA CDS 18900691 18900875 . - 2 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 14; exon_id "ENSE00003542757.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2663 chr22 HAVANA stop_codon 18900688 18900690 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; exon_number 14; exon_id "ENSE00003542757.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2664 chr22 HAVANA UTR 18923903 18923964 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2665 chr22 HAVANA UTR 18918661 18918711 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2666 chr22 HAVANA UTR 18900295 18900690 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000334029.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56223.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2667 chr22 HAVANA transcript 18900295 18924066 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2668 chr22 HAVANA exon 18923528 18924066 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 1; exon_id "ENSE00001833573.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2669 chr22 HAVANA CDS 18923528 18923800 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 1; exon_id "ENSE00001833573.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2670 chr22 HAVANA start_codon 18923798 18923800 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 1; exon_id "ENSE00001833573.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2671 chr22 HAVANA exon 18918503 18918711 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 2; exon_id "ENSE00003493343.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2672 chr22 HAVANA CDS 18918503 18918711 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 2; exon_id "ENSE00003493343.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2673 chr22 HAVANA exon 18913201 18913235 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 3; exon_id "ENSE00003609682.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2674 chr22 HAVANA CDS 18913201 18913235 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 3; exon_id "ENSE00003609682.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2675 chr22 HAVANA exon 18912564 18912713 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 4; exon_id "ENSE00003465975.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2676 chr22 HAVANA CDS 18912564 18912713 . - 2 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 4; exon_id "ENSE00003465975.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2677 chr22 HAVANA exon 18910628 18910692 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 5; exon_id "ENSE00003558751.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2678 chr22 HAVANA CDS 18910628 18910692 . - 2 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 5; exon_id "ENSE00003558751.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2679 chr22 HAVANA exon 18910330 18910446 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 6; exon_id "ENSE00003659586.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2680 chr22 HAVANA CDS 18910330 18910446 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 6; exon_id "ENSE00003659586.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2681 chr22 HAVANA exon 18909838 18909917 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 7; exon_id "ENSE00003610071.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2682 chr22 HAVANA CDS 18909838 18909917 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 7; exon_id "ENSE00003610071.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2683 chr22 HAVANA exon 18908855 18908936 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 8; exon_id "ENSE00003593423.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2684 chr22 HAVANA CDS 18908855 18908936 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 8; exon_id "ENSE00003593423.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2685 chr22 HAVANA exon 18907219 18907311 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 9; exon_id "ENSE00003609835.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2686 chr22 HAVANA CDS 18907219 18907311 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 9; exon_id "ENSE00003609835.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2687 chr22 HAVANA exon 18906964 18907110 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 10; exon_id "ENSE00003501304.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2688 chr22 HAVANA CDS 18906964 18907110 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 10; exon_id "ENSE00003501304.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2689 chr22 HAVANA exon 18905829 18906004 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 11; exon_id "ENSE00003471678.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2690 chr22 HAVANA CDS 18905829 18906004 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 11; exon_id "ENSE00003471678.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2691 chr22 HAVANA exon 18904403 18904501 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 12; exon_id "ENSE00003488051.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2692 chr22 HAVANA CDS 18904403 18904501 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 12; exon_id "ENSE00003488051.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2693 chr22 HAVANA exon 18900951 18901039 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 13; exon_id "ENSE00003635228.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2694 chr22 HAVANA CDS 18900951 18901039 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 13; exon_id "ENSE00003635228.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2695 chr22 HAVANA exon 18900295 18900875 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 14; exon_id "ENSE00003542757.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2696 chr22 HAVANA CDS 18900691 18900875 . - 2 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 14; exon_id "ENSE00003542757.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2697 chr22 HAVANA stop_codon 18900688 18900690 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; exon_number 14; exon_id "ENSE00003542757.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2698 chr22 HAVANA UTR 18923801 18924066 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2699 chr22 HAVANA UTR 18900295 18900690 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000357068.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRODH-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13754.1"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316637.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2700 chr22 HAVANA transcript 18902043 18909067 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000609229.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-014"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000472252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2701 chr22 HAVANA exon 18906964 18909067 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000609229.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-014"; exon_number 1; exon_id "ENSE00003708680.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000472252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2702 chr22 HAVANA exon 18905829 18906004 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000609229.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-014"; exon_number 2; exon_id "ENSE00003613967.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000472252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2703 chr22 HAVANA exon 18902043 18904501 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000609229.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-014"; exon_number 3; exon_id "ENSE00003703710.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000472252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2704 chr22 HAVANA transcript 18907069 18909052 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000446371.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-008"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2705 chr22 HAVANA exon 18908855 18909052 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000446371.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-008"; exon_number 1; exon_id "ENSE00001732480.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2706 chr22 HAVANA exon 18907069 18907311 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000446371.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-008"; exon_number 2; exon_id "ENSE00001772224.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2707 chr22 HAVANA transcript 18908894 18923655 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000438924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-011"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2708 chr22 HAVANA exon 18923528 18923655 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000438924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-011"; exon_number 1; exon_id "ENSE00003634985.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2709 chr22 HAVANA CDS 18923528 18923655 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000438924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-011"; exon_number 1; exon_id "ENSE00003634985.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2710 chr22 HAVANA exon 18913201 18913235 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000438924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-011"; exon_number 2; exon_id "ENSE00003648069.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2711 chr22 HAVANA CDS 18913201 18913235 . - 2 gene_id "ENSG00000100033.12"; transcript_id "ENST00000438924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-011"; exon_number 2; exon_id "ENSE00003648069.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2712 chr22 HAVANA exon 18912564 18912713 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000438924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-011"; exon_number 3; exon_id "ENSE00003620821.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2713 chr22 HAVANA CDS 18912564 18912713 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000438924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-011"; exon_number 3; exon_id "ENSE00003620821.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2714 chr22 HAVANA exon 18910330 18910446 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000438924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-011"; exon_number 4; exon_id "ENSE00003659586.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2715 chr22 HAVANA CDS 18910330 18910446 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000438924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-011"; exon_number 4; exon_id "ENSE00003659586.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2716 chr22 HAVANA exon 18909838 18909917 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000438924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-011"; exon_number 5; exon_id "ENSE00003610071.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2717 chr22 HAVANA CDS 18909838 18909917 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000438924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-011"; exon_number 5; exon_id "ENSE00003610071.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2718 chr22 HAVANA exon 18908894 18908936 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000438924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-011"; exon_number 6; exon_id "ENSE00001597918.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2719 chr22 HAVANA CDS 18908894 18908936 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000438924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-011"; exon_number 6; exon_id "ENSE00001597918.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2720 chr22 HAVANA transcript 18909759 18910823 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000399694.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-012"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316648.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2721 chr22 HAVANA exon 18910628 18910823 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000399694.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-012"; exon_number 1; exon_id "ENSE00001494651.2"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316648.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2722 chr22 HAVANA exon 18910330 18910446 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000399694.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-012"; exon_number 2; exon_id "ENSE00003571806.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316648.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
2723 chr22 HAVANA exon 18909759 18909917 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000399694.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-012"; exon_number 3; exon_id "ENSE00001419557.2"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316648.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2724 chr22 HAVANA transcript 18909885 18922341 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2725 chr22 HAVANA exon 18922275 18922341 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; exon_number 1; exon_id "ENSE00001787347.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2726 chr22 HAVANA exon 18918503 18918629 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; exon_number 2; exon_id "ENSE00001755387.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2727 chr22 HAVANA CDS 18918503 18918507 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; exon_number 2; exon_id "ENSE00001755387.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2728 chr22 HAVANA start_codon 18918505 18918507 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; exon_number 2; exon_id "ENSE00001755387.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2729 chr22 HAVANA exon 18913201 18913235 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; exon_number 3; exon_id "ENSE00003609682.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2730 chr22 HAVANA CDS 18913201 18913235 . - 1 gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; exon_number 3; exon_id "ENSE00003609682.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2731 chr22 HAVANA exon 18912564 18912713 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; exon_number 4; exon_id "ENSE00003465975.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2732 chr22 HAVANA CDS 18912564 18912713 . - 2 gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; exon_number 4; exon_id "ENSE00003465975.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2733 chr22 HAVANA exon 18910628 18910692 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; exon_number 5; exon_id "ENSE00003558751.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2734 chr22 HAVANA CDS 18910628 18910692 . - 2 gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; exon_number 5; exon_id "ENSE00003558751.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2735 chr22 HAVANA exon 18910330 18910446 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; exon_number 6; exon_id "ENSE00003659586.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2736 chr22 HAVANA CDS 18910330 18910446 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; exon_number 6; exon_id "ENSE00003659586.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2737 chr22 HAVANA exon 18909885 18909917 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; exon_number 7; exon_id "ENSE00001773030.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2738 chr22 HAVANA CDS 18909885 18909917 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; exon_number 7; exon_id "ENSE00001773030.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2739 chr22 HAVANA UTR 18922275 18922341 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2740 chr22 HAVANA UTR 18918508 18918629 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000450579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2741 chr22 HAVANA transcript 18910393 18923779 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000457083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-009"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2742 chr22 HAVANA exon 18923528 18923779 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000457083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-009"; exon_number 1; exon_id "ENSE00001748907.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2743 chr22 HAVANA CDS 18923528 18923779 . - 2 gene_id "ENSG00000100033.12"; transcript_id "ENST00000457083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-009"; exon_number 1; exon_id "ENSE00001748907.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2744 chr22 HAVANA exon 18913201 18913235 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000457083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-009"; exon_number 2; exon_id "ENSE00003648069.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2745 chr22 HAVANA CDS 18913201 18913235 . - 2 gene_id "ENSG00000100033.12"; transcript_id "ENST00000457083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-009"; exon_number 2; exon_id "ENSE00003648069.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2746 chr22 HAVANA exon 18912564 18912713 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000457083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-009"; exon_number 3; exon_id "ENSE00003620821.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2747 chr22 HAVANA CDS 18912564 18912713 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000457083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-009"; exon_number 3; exon_id "ENSE00003620821.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2748 chr22 HAVANA exon 18910393 18910446 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000457083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-009"; exon_number 4; exon_id "ENSE00001682015.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2749 chr22 HAVANA CDS 18910393 18910446 . - 0 gene_id "ENSG00000100033.12"; transcript_id "ENST00000457083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRODH-009"; exon_number 4; exon_id "ENSE00001682015.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000316645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2750 chr22 HAVANA transcript 18912238 18918623 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000496625.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-013"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000325202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2751 chr22 HAVANA exon 18918503 18918623 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000496625.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-013"; exon_number 1; exon_id "ENSE00001836776.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000325202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2752 chr22 HAVANA exon 18913201 18913235 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000496625.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-013"; exon_number 2; exon_id "ENSE00003497631.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000325202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2753 chr22 HAVANA exon 18912238 18912713 . - . gene_id "ENSG00000100033.12"; transcript_id "ENST00000496625.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRODH"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRODH-013"; exon_number 3; exon_id "ENSE00001892602.1"; level 2; havana_gene "OTTHUMG00000150163.4"; havana_transcript "OTTHUMT00000325202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2754 chr22 HAVANA gene 18958027 19018755 . + . gene_id "ENSG00000237517.4"; transcript_id "ENSG00000237517.4"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5"; level 1; havana_gene "OTTHUMG00000149977.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2755 chr22 HAVANA transcript 18958027 18982141 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000438934.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000314912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2756 chr22 HAVANA exon 18958027 18958171 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000438934.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-002"; exon_number 1; exon_id "ENSE00001615775.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000314912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2757 chr22 HAVANA exon 18975270 18975413 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000438934.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-002"; exon_number 2; exon_id "ENSE00001608344.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000314912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2758 chr22 HAVANA exon 18975604 18975708 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000438934.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-002"; exon_number 3; exon_id "ENSE00001772133.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000314912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2759 chr22 HAVANA exon 18976930 18976978 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000438934.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-002"; exon_number 4; exon_id "ENSE00001693092.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000314912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2760 chr22 HAVANA exon 18977093 18982141 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000438934.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-002"; exon_number 5; exon_id "ENSE00001728155.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000314912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2761 chr22 HAVANA transcript 18958038 19018755 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000440005.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000314911.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2762 chr22 HAVANA exon 18958038 18958171 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000440005.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-001"; exon_number 1; exon_id "ENSE00001612195.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000314911.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2763 chr22 HAVANA exon 18975270 18975413 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000440005.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-001"; exon_number 2; exon_id "ENSE00001608344.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000314911.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2764 chr22 HAVANA exon 18978233 18978437 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000440005.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-001"; exon_number 3; exon_id "ENSE00001679497.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000314911.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2765 chr22 HAVANA exon 18979330 18979530 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000440005.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-001"; exon_number 4; exon_id "ENSE00001707176.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000314911.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2766 chr22 HAVANA exon 19001866 19002019 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000440005.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-001"; exon_number 5; exon_id "ENSE00001754028.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000314911.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2767 chr22 HAVANA exon 19018295 19018755 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000440005.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-001"; exon_number 6; exon_id "ENSE00001699570.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000314911.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2768 chr22 HAVANA transcript 18958096 18978396 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000421572.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-004"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000316630.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2769 chr22 HAVANA exon 18958096 18958171 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000421572.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-004"; exon_number 1; exon_id "ENSE00001778288.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000316630.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2770 chr22 HAVANA exon 18973349 18973532 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000421572.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-004"; exon_number 2; exon_id "ENSE00001800356.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000316630.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2771 chr22 HAVANA exon 18975270 18975413 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000421572.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-004"; exon_number 3; exon_id "ENSE00001608344.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000316630.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2772 chr22 HAVANA exon 18978233 18978396 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000421572.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-004"; exon_number 4; exon_id "ENSE00001730870.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000316630.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2773 chr22 ENSEMBL transcript 18973215 18973941 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000399539.3"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000149977.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2774 chr22 ENSEMBL exon 18973215 18973941 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000399539.3"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-201"; exon_number 1; exon_id "ENSE00002217365.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149977.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2775 chr22 ENSEMBL transcript 18979510 18980156 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000537283.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000149977.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2776 chr22 ENSEMBL exon 18979510 18980156 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000537283.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-202"; exon_number 1; exon_id "ENSE00002294558.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149977.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2777 chr22 HAVANA transcript 18985787 19002299 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000424407.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000316503.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2778 chr22 HAVANA exon 18985787 18986042 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000424407.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-003"; exon_number 1; exon_id "ENSE00001594837.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000316503.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2779 chr22 HAVANA exon 18990380 18990438 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000424407.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-003"; exon_number 2; exon_id "ENSE00001658346.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000316503.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2780 chr22 HAVANA exon 18993346 18993455 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000424407.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-003"; exon_number 3; exon_id "ENSE00001650481.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000316503.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2781 chr22 HAVANA exon 19001866 19002019 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000424407.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-003"; exon_number 4; exon_id "ENSE00001754028.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000316503.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2782 chr22 HAVANA exon 19002111 19002299 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000424407.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-003"; exon_number 5; exon_id "ENSE00001799100.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149977.4"; havana_transcript "OTTHUMT00000316503.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2783 chr22 ENSEMBL transcript 18985788 18987264 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000540720.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000149977.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2784 chr22 ENSEMBL exon 18985788 18987264 . + . gene_id "ENSG00000237517.4"; transcript_id "ENST00000540720.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "DGCR5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "DGCR5-203"; exon_number 1; exon_id "ENSE00002233878.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149977.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2785 chr22 HAVANA gene 18984651 18985108 . - . gene_id "ENSG00000271275.1"; transcript_id "ENSG00000271275.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007326.9"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC007326.9"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000184895.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2786 chr22 HAVANA transcript 18984651 18985108 . - . gene_id "ENSG00000271275.1"; transcript_id "ENST00000604539.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007326.9"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC007326.9-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000184895.1"; havana_transcript "OTTHUMT00000469311.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2787 chr22 HAVANA exon 18984651 18985108 . - . gene_id "ENSG00000271275.1"; transcript_id "ENST00000604539.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007326.9"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC007326.9-001"; exon_number 1; exon_id "ENSE00003490895.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000184895.1"; havana_transcript "OTTHUMT00000469311.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2788 chr22 HAVANA gene 19005347 19007761 . + . gene_id "ENSG00000273032.1"; transcript_id "ENSG00000273032.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "DGCR9"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "DGCR9"; level 2; havana_gene "OTTHUMG00000186098.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2789 chr22 HAVANA transcript 19005347 19007761 . + . gene_id "ENSG00000273032.1"; transcript_id "ENST00000609630.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "DGCR9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "DGCR9-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186098.1"; havana_transcript "OTTHUMT00000472253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2790 chr22 HAVANA exon 19005347 19007761 . + . gene_id "ENSG00000273032.1"; transcript_id "ENST00000609630.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "DGCR9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "DGCR9-001"; exon_number 1; exon_id "ENSE00003703648.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186098.1"; havana_transcript "OTTHUMT00000472253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2791 chr22 HAVANA gene 19005556 19006429 . - . gene_id "ENSG00000270393.1"; transcript_id "ENSG00000270393.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000095.9"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC000095.9"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000184897.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2792 chr22 HAVANA transcript 19005556 19006429 . - . gene_id "ENSG00000270393.1"; transcript_id "ENST00000603208.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000095.9"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC000095.9-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000184897.1"; havana_transcript "OTTHUMT00000469313.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2793 chr22 HAVANA exon 19005556 19006429 . - . gene_id "ENSG00000270393.1"; transcript_id "ENST00000603208.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000095.9"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC000095.9-001"; exon_number 1; exon_id "ENSE00003542685.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000184897.1"; havana_transcript "OTTHUMT00000469313.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2794 chr22 HAVANA gene 19010569 19011063 . + . gene_id "ENSG00000273164.1"; transcript_id "ENSG00000273164.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "DGCR10"; transcript_type "sense_intronic"; transcript_status "NOVEL"; transcript_name "DGCR10"; level 2; havana_gene "OTTHUMG00000186099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2795 chr22 HAVANA transcript 19010569 19011063 . + . gene_id "ENSG00000273164.1"; transcript_id "ENST00000609839.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "DGCR10"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "DGCR10-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186099.1"; havana_transcript "OTTHUMT00000472254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2796 chr22 HAVANA exon 19010569 19011063 . + . gene_id "ENSG00000273164.1"; transcript_id "ENST00000609839.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "DGCR10"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "DGCR10-001"; exon_number 1; exon_id "ENSE00003706160.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186099.1"; havana_transcript "OTTHUMT00000472254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2797 chr22 HAVANA gene 19019077 19022077 . - . gene_id "ENSG00000241527.1"; transcript_id "ENSG00000241527.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P1"; level 2; havana_gene "OTTHUMG00000157581.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2798 chr22 HAVANA transcript 19019077 19022077 . - . gene_id "ENSG00000241527.1"; transcript_id "ENST00000481698.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P1"; transcript_type "unitary_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P1-001"; level 2; ont "PGO:0000006"; havana_gene "OTTHUMG00000157581.1"; havana_transcript "OTTHUMT00000349215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2799 chr22 HAVANA exon 19022042 19022077 . - . gene_id "ENSG00000241527.1"; transcript_id "ENST00000481698.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P1"; transcript_type "unitary_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P1-001"; exon_number 1; exon_id "ENSE00001868933.1"; level 2; ont "PGO:0000006"; havana_gene "OTTHUMG00000157581.1"; havana_transcript "OTTHUMT00000349215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2800 chr22 HAVANA exon 19021305 19021464 . - . gene_id "ENSG00000241527.1"; transcript_id "ENST00000481698.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P1"; transcript_type "unitary_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P1-001"; exon_number 2; exon_id "ENSE00001854735.1"; level 2; ont "PGO:0000006"; havana_gene "OTTHUMG00000157581.1"; havana_transcript "OTTHUMT00000349215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2801 chr22 HAVANA exon 19020557 19020726 . - . gene_id "ENSG00000241527.1"; transcript_id "ENST00000481698.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P1"; transcript_type "unitary_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P1-001"; exon_number 3; exon_id "ENSE00001893428.1"; level 2; ont "PGO:0000006"; havana_gene "OTTHUMG00000157581.1"; havana_transcript "OTTHUMT00000349215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2802 chr22 HAVANA exon 19020347 19020453 . - . gene_id "ENSG00000241527.1"; transcript_id "ENST00000481698.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P1"; transcript_type "unitary_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P1-001"; exon_number 4; exon_id "ENSE00001878123.1"; level 2; ont "PGO:0000006"; havana_gene "OTTHUMG00000157581.1"; havana_transcript "OTTHUMT00000349215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2803 chr22 HAVANA exon 19019979 19020045 . - . gene_id "ENSG00000241527.1"; transcript_id "ENST00000481698.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P1"; transcript_type "unitary_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P1-001"; exon_number 5; exon_id "ENSE00001881904.1"; level 2; ont "PGO:0000006"; havana_gene "OTTHUMG00000157581.1"; havana_transcript "OTTHUMT00000349215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2804 chr22 HAVANA exon 19019712 19019869 . - . gene_id "ENSG00000241527.1"; transcript_id "ENST00000481698.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P1"; transcript_type "unitary_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P1-001"; exon_number 6; exon_id "ENSE00001875163.1"; level 2; ont "PGO:0000006"; havana_gene "OTTHUMG00000157581.1"; havana_transcript "OTTHUMT00000349215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2805 chr22 HAVANA exon 19019510 19019596 . - . gene_id "ENSG00000241527.1"; transcript_id "ENST00000481698.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P1"; transcript_type "unitary_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P1-001"; exon_number 7; exon_id "ENSE00001839703.1"; level 2; ont "PGO:0000006"; havana_gene "OTTHUMG00000157581.1"; havana_transcript "OTTHUMT00000349215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2806 chr22 HAVANA exon 19019077 19019196 . - . gene_id "ENSG00000241527.1"; transcript_id "ENST00000481698.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P1"; transcript_type "unitary_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P1-001"; exon_number 8; exon_id "ENSE00001932263.1"; level 2; ont "PGO:0000006"; havana_gene "OTTHUMG00000157581.1"; havana_transcript "OTTHUMT00000349215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2807 chr22 HAVANA gene 19023795 19109967 . - . gene_id "ENSG00000070413.14"; transcript_id "ENSG00000070413.14"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2"; level 2; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2808 chr22 ENSEMBL transcript 19023795 19109967 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2809 chr22 ENSEMBL exon 19109641 19109967 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 1; exon_id "ENSE00001494596.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2810 chr22 ENSEMBL CDS 19109641 19109719 . - 0 gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 1; exon_id "ENSE00001494596.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2811 chr22 ENSEMBL start_codon 19109717 19109719 . - 0 gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 1; exon_id "ENSE00001494596.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2812 chr22 ENSEMBL exon 19055613 19055738 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 2; exon_id "ENSE00003509087.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2813 chr22 ENSEMBL CDS 19055613 19055738 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 2; exon_id "ENSE00003509087.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2814 chr22 ENSEMBL exon 19052361 19052580 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 3; exon_id "ENSE00001505305.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2815 chr22 ENSEMBL CDS 19052361 19052580 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 3; exon_id "ENSE00001505305.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2816 chr22 ENSEMBL exon 19050715 19050791 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 4; exon_id "ENSE00003532380.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2817 chr22 ENSEMBL CDS 19050715 19050791 . - 1 gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 4; exon_id "ENSE00003532380.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2818 chr22 ENSEMBL exon 19044499 19044675 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 5; exon_id "ENSE00003605226.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2819 chr22 ENSEMBL CDS 19044499 19044675 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 5; exon_id "ENSE00003605226.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2820 chr22 ENSEMBL exon 19035953 19036156 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 6; exon_id "ENSE00003635725.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2821 chr22 ENSEMBL CDS 19035953 19036156 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 6; exon_id "ENSE00003635725.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2822 chr22 ENSEMBL exon 19029320 19029472 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 7; exon_id "ENSE00003692494.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2823 chr22 ENSEMBL CDS 19029320 19029472 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 7; exon_id "ENSE00003692494.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2824 chr22 ENSEMBL exon 19028571 19028807 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 8; exon_id "ENSE00003506772.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2825 chr22 ENSEMBL CDS 19028571 19028807 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 8; exon_id "ENSE00003506772.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2826 chr22 ENSEMBL exon 19023795 19026634 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 9; exon_id "ENSE00002292646.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2827 chr22 ENSEMBL CDS 19026381 19026634 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 9; exon_id "ENSE00002292646.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2828 chr22 ENSEMBL stop_codon 19026378 19026380 . - 0 gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; exon_number 9; exon_id "ENSE00002292646.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2829 chr22 ENSEMBL UTR 19109720 19109967 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2830 chr22 ENSEMBL UTR 19023795 19026380 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000537045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54496.1"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2831 chr22 HAVANA transcript 19023799 19109920 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2832 chr22 HAVANA exon 19109641 19109920 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 1; exon_id "ENSE00003505394.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2833 chr22 HAVANA exon 19076881 19077003 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 2; exon_id "ENSE00003540739.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2834 chr22 HAVANA exon 19055613 19055738 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 3; exon_id "ENSE00003634081.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2835 chr22 HAVANA exon 19052361 19052571 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 4; exon_id "ENSE00003683417.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2836 chr22 HAVANA exon 19050715 19050791 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 5; exon_id "ENSE00003582536.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2837 chr22 HAVANA exon 19048079 19048468 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 6; exon_id "ENSE00003493108.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2838 chr22 HAVANA exon 19044499 19044675 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 7; exon_id "ENSE00003573833.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2839 chr22 HAVANA CDS 19044499 19044628 . - 0 gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 7; exon_id "ENSE00003573833.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2840 chr22 HAVANA start_codon 19044626 19044628 . - 0 gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 7; exon_id "ENSE00003573833.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2841 chr22 HAVANA exon 19035953 19036156 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 8; exon_id "ENSE00003635725.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2842 chr22 HAVANA CDS 19035953 19036156 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 8; exon_id "ENSE00003635725.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2843 chr22 HAVANA exon 19029320 19029472 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 9; exon_id "ENSE00003692494.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2844 chr22 HAVANA CDS 19029320 19029472 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 9; exon_id "ENSE00003692494.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2845 chr22 HAVANA exon 19028571 19028807 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 10; exon_id "ENSE00003506772.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2846 chr22 HAVANA CDS 19028571 19028807 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 10; exon_id "ENSE00003506772.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2847 chr22 HAVANA exon 19023799 19026634 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 11; exon_id "ENSE00001546893.2"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2848 chr22 HAVANA CDS 19026381 19026634 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 11; exon_id "ENSE00001546893.2"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2849 chr22 HAVANA stop_codon 19026378 19026380 . - 0 gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; exon_number 11; exon_id "ENSE00001546893.2"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2850 chr22 HAVANA UTR 19109641 19109920 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2851 chr22 HAVANA UTR 19076881 19077003 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2852 chr22 HAVANA UTR 19055613 19055738 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2853 chr22 HAVANA UTR 19052361 19052571 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2854 chr22 HAVANA UTR 19050715 19050791 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2855 chr22 HAVANA UTR 19048079 19048468 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2856 chr22 HAVANA UTR 19044629 19044675 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2857 chr22 HAVANA UTR 19023799 19026380 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000389262.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR2-002"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2858 chr22 HAVANA transcript 19023799 19109967 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2859 chr22 HAVANA exon 19109641 19109967 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 1; exon_id "ENSE00001494596.2"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2860 chr22 HAVANA CDS 19109641 19109719 . - 0 gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 1; exon_id "ENSE00001494596.2"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2861 chr22 HAVANA start_codon 19109717 19109719 . - 0 gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 1; exon_id "ENSE00001494596.2"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2862 chr22 HAVANA exon 19076881 19077003 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 2; exon_id "ENSE00003526069.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2863 chr22 HAVANA CDS 19076881 19077003 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 2; exon_id "ENSE00003526069.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2864 chr22 HAVANA exon 19055613 19055738 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 3; exon_id "ENSE00003509087.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2865 chr22 HAVANA CDS 19055613 19055738 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 3; exon_id "ENSE00003509087.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2866 chr22 HAVANA exon 19052361 19052580 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 4; exon_id "ENSE00001505305.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2867 chr22 HAVANA CDS 19052361 19052580 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 4; exon_id "ENSE00001505305.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2868 chr22 HAVANA exon 19050715 19050791 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 5; exon_id "ENSE00003532380.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2869 chr22 HAVANA CDS 19050715 19050791 . - 1 gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 5; exon_id "ENSE00003532380.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2870 chr22 HAVANA exon 19044499 19044675 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 6; exon_id "ENSE00003605226.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2871 chr22 HAVANA CDS 19044499 19044675 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 6; exon_id "ENSE00003605226.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2872 chr22 HAVANA exon 19035953 19036156 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 7; exon_id "ENSE00003635725.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2873 chr22 HAVANA CDS 19035953 19036156 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 7; exon_id "ENSE00003635725.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2874 chr22 HAVANA exon 19029320 19029472 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 8; exon_id "ENSE00003692494.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2875 chr22 HAVANA CDS 19029320 19029472 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 8; exon_id "ENSE00003692494.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2876 chr22 HAVANA exon 19028571 19028807 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 9; exon_id "ENSE00003506772.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2877 chr22 HAVANA CDS 19028571 19028807 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 9; exon_id "ENSE00003506772.1"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2878 chr22 HAVANA exon 19023799 19026634 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 10; exon_id "ENSE00001546893.2"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2879 chr22 HAVANA CDS 19026381 19026634 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 10; exon_id "ENSE00001546893.2"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2880 chr22 HAVANA stop_codon 19026378 19026380 . - 0 gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; exon_number 10; exon_id "ENSE00001546893.2"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2881 chr22 HAVANA UTR 19109720 19109967 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2882 chr22 HAVANA UTR 19023799 19026380 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000263196.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-001"; level 2; tag "non_canonical_conserved"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33598.1"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316504.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2883 chr22 ENSEMBL transcript 19023801 19109920 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2884 chr22 ENSEMBL exon 19109641 19109920 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 1; exon_id "ENSE00003599219.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2885 chr22 ENSEMBL CDS 19109641 19109719 . - 0 gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 1; exon_id "ENSE00003599219.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2886 chr22 ENSEMBL start_codon 19109717 19109719 . - 0 gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 1; exon_id "ENSE00003599219.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2887 chr22 ENSEMBL exon 19076881 19077003 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 2; exon_id "ENSE00003526069.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2888 chr22 ENSEMBL CDS 19076881 19077003 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 2; exon_id "ENSE00003526069.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2889 chr22 ENSEMBL exon 19055613 19055738 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 3; exon_id "ENSE00003509087.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2890 chr22 ENSEMBL CDS 19055613 19055738 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 3; exon_id "ENSE00003509087.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2891 chr22 ENSEMBL exon 19052361 19052571 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 4; exon_id "ENSE00003634338.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2892 chr22 ENSEMBL CDS 19052361 19052571 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 4; exon_id "ENSE00003634338.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2893 chr22 ENSEMBL exon 19050715 19050791 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 5; exon_id "ENSE00003532380.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2894 chr22 ENSEMBL CDS 19050715 19050791 . - 1 gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 5; exon_id "ENSE00003532380.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2895 chr22 ENSEMBL exon 19048079 19048468 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 6; exon_id "ENSE00003514576.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2896 chr22 ENSEMBL CDS 19048278 19048468 . - 2 gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 6; exon_id "ENSE00003514576.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
2897 chr22 ENSEMBL stop_codon 19048275 19048277 . - 0 gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 6; exon_id "ENSE00003514576.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2898 chr22 ENSEMBL exon 19044499 19044675 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 7; exon_id "ENSE00003464976.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2899 chr22 ENSEMBL exon 19035953 19036156 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 8; exon_id "ENSE00003560228.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2900 chr22 ENSEMBL exon 19029320 19029472 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 9; exon_id "ENSE00003473578.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2901 chr22 ENSEMBL exon 19028571 19028807 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 10; exon_id "ENSE00003631249.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2902 chr22 ENSEMBL exon 19023801 19026634 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; exon_number 11; exon_id "ENSE00002319694.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2903 chr22 ENSEMBL UTR 19109720 19109920 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2904 chr22 ENSEMBL UTR 19048079 19048277 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2905 chr22 ENSEMBL UTR 19044499 19044675 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2906 chr22 ENSEMBL UTR 19035953 19036156 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2907 chr22 ENSEMBL UTR 19029320 19029472 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2908 chr22 ENSEMBL UTR 19028571 19028807 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2909 chr22 ENSEMBL UTR 19023801 19026634 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000545799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR2-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150141.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2910 chr22 HAVANA transcript 19025350 19044566 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000467659.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR2-003"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316506.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2911 chr22 HAVANA exon 19044499 19044566 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000467659.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR2-003"; exon_number 1; exon_id "ENSE00001861264.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316506.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2912 chr22 HAVANA exon 19035953 19036156 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000467659.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR2-003"; exon_number 2; exon_id "ENSE00003560228.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316506.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2913 chr22 HAVANA exon 19028571 19029472 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000467659.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR2-003"; exon_number 3; exon_id "ENSE00001918137.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316506.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2914 chr22 HAVANA exon 19025350 19026634 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000467659.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR2-003"; exon_number 4; exon_id "ENSE00000879090.7"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316506.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2915 chr22 HAVANA transcript 19035892 19050790 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000608548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DGCR2-005"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000472499.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2916 chr22 HAVANA exon 19050715 19050790 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000608548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DGCR2-005"; exon_number 1; exon_id "ENSE00003703173.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000472499.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2917 chr22 HAVANA exon 19044499 19044675 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000608548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DGCR2-005"; exon_number 2; exon_id "ENSE00003464976.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000472499.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2918 chr22 HAVANA exon 19035892 19036156 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000608548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DGCR2-005"; exon_number 3; exon_id "ENSE00003704856.1"; level 2; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000472499.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2919 chr22 HAVANA transcript 19044507 19053417 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000473832.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "DGCR2-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2920 chr22 HAVANA exon 19053269 19053417 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000473832.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "DGCR2-004"; exon_number 1; exon_id "ENSE00001899170.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2921 chr22 HAVANA exon 19052361 19052571 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000473832.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "DGCR2-004"; exon_number 2; exon_id "ENSE00003683417.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2922 chr22 HAVANA exon 19050715 19050791 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000473832.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "DGCR2-004"; exon_number 3; exon_id "ENSE00003582536.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2923 chr22 HAVANA exon 19044507 19044675 . - . gene_id "ENSG00000070413.14"; transcript_id "ENST00000473832.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "DGCR2-004"; exon_number 4; exon_id "ENSE00001864625.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150141.2"; havana_transcript "OTTHUMT00000316507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2924 chr22 ENSEMBL gene 19032769 19032880 . + . gene_id "ENSG00000206739.1"; transcript_id "ENSG00000206739.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Y_RNA"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Y_RNA"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2925 chr22 ENSEMBL transcript 19032769 19032880 . + . gene_id "ENSG00000206739.1"; transcript_id "ENST00000384012.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Y_RNA"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Y_RNA.454-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2926 chr22 ENSEMBL exon 19032769 19032880 . + . gene_id "ENSG00000206739.1"; transcript_id "ENST00000384012.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Y_RNA"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Y_RNA.454-201"; exon_number 1; exon_id "ENSE00001808012.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2927 chr22 HAVANA gene 19033675 19035888 . - . gene_id "ENSG00000273311.1"; transcript_id "ENSG00000273311.1"; gene_type "sense_intronic"; gene_status "KNOWN"; gene_name "DGCR11"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "DGCR11"; level 2; havana_gene "OTTHUMG00000186100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2928 chr22 HAVANA transcript 19033675 19035888 . - . gene_id "ENSG00000273311.1"; transcript_id "ENST00000609958.1"; gene_type "sense_intronic"; gene_status "KNOWN"; gene_name "DGCR11"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "DGCR11-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186100.1"; havana_transcript "OTTHUMT00000472255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2929 chr22 HAVANA exon 19033675 19035888 . - . gene_id "ENSG00000273311.1"; transcript_id "ENST00000609958.1"; gene_type "sense_intronic"; gene_status "KNOWN"; gene_name "DGCR11"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "DGCR11-001"; exon_number 1; exon_id "ENSE00003703284.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186100.1"; havana_transcript "OTTHUMT00000472255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2930 chr22 HAVANA gene 19043314 19044025 . + . gene_id "ENSG00000237347.2"; transcript_id "ENSG00000237347.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC004461.4"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC004461.4"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150140.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2931 chr22 HAVANA transcript 19043314 19044025 . + . gene_id "ENSG00000237347.2"; transcript_id "ENST00000412461.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC004461.4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC004461.4-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150140.2"; havana_transcript "OTTHUMT00000316502.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2932 chr22 HAVANA exon 19043314 19043536 . + . gene_id "ENSG00000237347.2"; transcript_id "ENST00000412461.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC004461.4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC004461.4-001"; exon_number 1; exon_id "ENSE00001704679.2"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150140.2"; havana_transcript "OTTHUMT00000316502.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2933 chr22 HAVANA exon 19043846 19044025 . + . gene_id "ENSG00000237347.2"; transcript_id "ENST00000412461.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC004461.4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC004461.4-001"; exon_number 2; exon_id "ENSE00003144038.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150140.2"; havana_transcript "OTTHUMT00000316502.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2934 chr22 HAVANA gene 19109042 19112016 . + . gene_id "ENSG00000223461.1"; transcript_id "ENSG00000223461.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC004471.9"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AC004471.9"; level 2; havana_gene "OTTHUMG00000150139.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2935 chr22 HAVANA transcript 19109042 19112016 . + . gene_id "ENSG00000223461.1"; transcript_id "ENST00000456035.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC004471.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC004471.9-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150139.1"; havana_transcript "OTTHUMT00000316501.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2936 chr22 HAVANA exon 19109042 19109465 . + . gene_id "ENSG00000223461.1"; transcript_id "ENST00000456035.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC004471.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC004471.9-001"; exon_number 1; exon_id "ENSE00001658061.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150139.1"; havana_transcript "OTTHUMT00000316501.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2937 chr22 HAVANA exon 19111859 19112016 . + . gene_id "ENSG00000223461.1"; transcript_id "ENST00000456035.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC004471.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC004471.9-001"; exon_number 2; exon_id "ENSE00001736434.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150139.1"; havana_transcript "OTTHUMT00000316501.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2938 chr22 HAVANA gene 19111822 19115962 . - . gene_id "ENSG00000272682.1"; transcript_id "ENSG00000272682.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC004471.10"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AC004471.10"; level 2; havana_gene "OTTHUMG00000186185.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2939 chr22 HAVANA transcript 19111822 19115962 . - . gene_id "ENSG00000272682.1"; transcript_id "ENST00000609936.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC004471.10"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC004471.10-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186185.2"; havana_transcript "OTTHUMT00000472378.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2940 chr22 HAVANA exon 19115606 19115962 . - . gene_id "ENSG00000272682.1"; transcript_id "ENST00000609936.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC004471.10"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC004471.10-001"; exon_number 1; exon_id "ENSE00003704886.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186185.2"; havana_transcript "OTTHUMT00000472378.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2941 chr22 HAVANA exon 19113182 19113354 . - . gene_id "ENSG00000272682.1"; transcript_id "ENST00000609936.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC004471.10"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC004471.10-001"; exon_number 2; exon_id "ENSE00003707459.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186185.2"; havana_transcript "OTTHUMT00000472378.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2942 chr22 HAVANA exon 19111822 19112805 . - . gene_id "ENSG00000272682.1"; transcript_id "ENST00000609936.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC004471.10"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC004471.10-001"; exon_number 3; exon_id "ENSE00003708914.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186185.2"; havana_transcript "OTTHUMT00000472378.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2943 chr22 HAVANA gene 19112392 19113159 . + . gene_id "ENSG00000231086.1"; transcript_id "ENSG00000231086.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TSSK1A"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "TSSK1A"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150125.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2944 chr22 HAVANA transcript 19112392 19113159 . + . gene_id "ENSG00000231086.1"; transcript_id "ENST00000450724.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TSSK1A"; transcript_type "unitary_pseudogene"; transcript_status "KNOWN"; transcript_name "TSSK1A-001"; level 1; ont "PGO:0000006"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150125.2"; havana_transcript "OTTHUMT00000316447.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2945 chr22 HAVANA exon 19112392 19113159 . + . gene_id "ENSG00000231086.1"; transcript_id "ENST00000450724.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TSSK1A"; transcript_type "unitary_pseudogene"; transcript_status "KNOWN"; transcript_name "TSSK1A-001"; exon_number 1; exon_id "ENSE00001719941.1"; level 1; ont "PGO:0000006"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150125.2"; havana_transcript "OTTHUMT00000316447.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2946 chr22 HAVANA gene 19117792 19132197 . - . gene_id "ENSG00000100056.7"; transcript_id "ENSG00000100056.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14"; level 2; havana_gene "OTTHUMG00000150119.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2947 chr22 HAVANA transcript 19117792 19132197 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2948 chr22 HAVANA exon 19132019 19132197 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 1; exon_id "ENSE00001760340.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2949 chr22 HAVANA CDS 19132019 19132153 . - 0 gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 1; exon_id "ENSE00001760340.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2950 chr22 HAVANA start_codon 19132151 19132153 . - 0 gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 1; exon_id "ENSE00001760340.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2951 chr22 HAVANA exon 19130239 19130407 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 2; exon_id "ENSE00003568380.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2952 chr22 HAVANA CDS 19130239 19130407 . - 0 gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 2; exon_id "ENSE00003568380.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2953 chr22 HAVANA exon 19130051 19130146 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 3; exon_id "ENSE00003633046.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2954 chr22 HAVANA CDS 19130051 19130146 . - 2 gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 3; exon_id "ENSE00003633046.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2955 chr22 HAVANA exon 19127368 19127537 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 4; exon_id "ENSE00003509646.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2956 chr22 HAVANA CDS 19127368 19127537 . - 2 gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 4; exon_id "ENSE00003509646.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2957 chr22 HAVANA exon 19127125 19127242 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 5; exon_id "ENSE00003612419.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2958 chr22 HAVANA CDS 19127125 19127242 . - 0 gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 5; exon_id "ENSE00003612419.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2959 chr22 HAVANA exon 19126672 19126805 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 6; exon_id "ENSE00003635250.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2960 chr22 HAVANA CDS 19126672 19126805 . - 2 gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 6; exon_id "ENSE00003635250.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2961 chr22 HAVANA exon 19125728 19125830 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 7; exon_id "ENSE00003524304.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2962 chr22 HAVANA CDS 19125728 19125830 . - 0 gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 7; exon_id "ENSE00003524304.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2963 chr22 HAVANA exon 19124836 19124945 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 8; exon_id "ENSE00003536450.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2964 chr22 HAVANA CDS 19124836 19124945 . - 2 gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 8; exon_id "ENSE00003536450.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2965 chr22 HAVANA exon 19122573 19122688 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 9; exon_id "ENSE00003470560.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2966 chr22 HAVANA CDS 19122573 19122688 . - 0 gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 9; exon_id "ENSE00003470560.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2967 chr22 HAVANA exon 19117792 19121988 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 10; exon_id "ENSE00000879093.9"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2968 chr22 HAVANA CDS 19121712 19121988 . - 1 gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 10; exon_id "ENSE00000879093.9"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2969 chr22 HAVANA stop_codon 19121709 19121711 . - 0 gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; exon_number 10; exon_id "ENSE00000879093.9"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2970 chr22 HAVANA UTR 19132154 19132197 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2971 chr22 HAVANA UTR 19117792 19121711 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000252137.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR14-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13756.1"; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316432.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2972 chr22 HAVANA transcript 19121450 19132197 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2973 chr22 HAVANA exon 19132019 19132197 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 1; exon_id "ENSE00001760340.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2974 chr22 HAVANA CDS 19132019 19132153 . - 0 gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 1; exon_id "ENSE00001760340.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2975 chr22 HAVANA start_codon 19132151 19132153 . - 0 gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 1; exon_id "ENSE00001760340.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2976 chr22 HAVANA exon 19130239 19130407 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 2; exon_id "ENSE00003568380.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2977 chr22 HAVANA CDS 19130239 19130407 . - 0 gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 2; exon_id "ENSE00003568380.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2978 chr22 HAVANA exon 19130051 19130146 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 3; exon_id "ENSE00003633046.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2979 chr22 HAVANA CDS 19130051 19130146 . - 2 gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 3; exon_id "ENSE00003633046.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2980 chr22 HAVANA exon 19127368 19127537 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 4; exon_id "ENSE00003509646.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2981 chr22 HAVANA CDS 19127368 19127537 . - 2 gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 4; exon_id "ENSE00003509646.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2982 chr22 HAVANA exon 19127125 19127242 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 5; exon_id "ENSE00003612419.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2983 chr22 HAVANA CDS 19127125 19127242 . - 0 gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 5; exon_id "ENSE00003612419.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2984 chr22 HAVANA exon 19126672 19126805 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 6; exon_id "ENSE00003635250.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2985 chr22 HAVANA CDS 19126672 19126805 . - 2 gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 6; exon_id "ENSE00003635250.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2986 chr22 HAVANA exon 19125816 19125992 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 7; exon_id "ENSE00001701931.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2987 chr22 HAVANA CDS 19125936 19125992 . - 0 gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 7; exon_id "ENSE00001701931.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2988 chr22 HAVANA stop_codon 19125933 19125935 . - 0 gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 7; exon_id "ENSE00001701931.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2989 chr22 HAVANA exon 19124836 19124945 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 8; exon_id "ENSE00003618650.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2990 chr22 HAVANA exon 19122573 19122688 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 9; exon_id "ENSE00003676867.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2991 chr22 HAVANA exon 19121450 19121988 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; exon_number 10; exon_id "ENSE00001722735.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2992 chr22 HAVANA UTR 19132154 19132197 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2993 chr22 HAVANA UTR 19125816 19125935 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2994 chr22 HAVANA UTR 19124836 19124945 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2995 chr22 HAVANA UTR 19122573 19122688 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2996 chr22 HAVANA UTR 19121450 19121988 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000434568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR14-002"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316433.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2997 chr22 HAVANA transcript 19121481 19132146 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000472073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR14-003"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316434.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2998 chr22 HAVANA exon 19131570 19132146 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000472073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR14-003"; exon_number 1; exon_id "ENSE00001810794.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316434.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
2999 chr22 HAVANA exon 19130239 19130407 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000472073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR14-003"; exon_number 2; exon_id "ENSE00003661120.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316434.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3000 chr22 HAVANA exon 19130051 19130146 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000472073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR14-003"; exon_number 3; exon_id "ENSE00003560043.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316434.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3001 chr22 HAVANA exon 19127368 19127537 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000472073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR14-003"; exon_number 4; exon_id "ENSE00003632422.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316434.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3002 chr22 HAVANA exon 19127125 19127242 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000472073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR14-003"; exon_number 5; exon_id "ENSE00003542598.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316434.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3003 chr22 HAVANA exon 19126672 19126805 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000472073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR14-003"; exon_number 6; exon_id "ENSE00003598496.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316434.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3004 chr22 HAVANA exon 19125728 19125830 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000472073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR14-003"; exon_number 7; exon_id "ENSE00003620928.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316434.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3005 chr22 HAVANA exon 19124836 19124945 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000472073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR14-003"; exon_number 8; exon_id "ENSE00003618650.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316434.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3006 chr22 HAVANA exon 19122573 19122688 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000472073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR14-003"; exon_number 9; exon_id "ENSE00003676867.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316434.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3007 chr22 HAVANA exon 19121481 19121988 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000472073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR14-003"; exon_number 10; exon_id "ENSE00001882814.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316434.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3008 chr22 HAVANA transcript 19130363 19132172 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000469466.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR14-004"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316435.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3009 chr22 HAVANA exon 19131637 19132172 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000469466.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR14-004"; exon_number 1; exon_id "ENSE00000650649.4"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316435.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3010 chr22 HAVANA exon 19130363 19130407 . - . gene_id "ENSG00000100056.7"; transcript_id "ENST00000469466.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR14-004"; exon_number 2; exon_id "ENSE00001835675.1"; level 2; havana_gene "OTTHUMG00000150119.5"; havana_transcript "OTTHUMT00000316435.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3011 chr22 HAVANA gene 19118321 19120134 . + . gene_id "ENSG00000206203.3"; transcript_id "ENSG00000206203.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TSSK2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TSSK2"; level 2; havana_gene "OTTHUMG00000150118.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3012 chr22 HAVANA transcript 19118321 19120134 . + . gene_id "ENSG00000206203.3"; transcript_id "ENST00000399635.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TSSK2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TSSK2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13755.1"; havana_gene "OTTHUMG00000150118.1"; havana_transcript "OTTHUMT00000316431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3013 chr22 HAVANA exon 19118321 19120134 . + . gene_id "ENSG00000206203.3"; transcript_id "ENST00000399635.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TSSK2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TSSK2-001"; exon_number 1; exon_id "ENSE00001539405.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13755.1"; havana_gene "OTTHUMG00000150118.1"; havana_transcript "OTTHUMT00000316431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3014 chr22 HAVANA CDS 19118913 19119986 . + 0 gene_id "ENSG00000206203.3"; transcript_id "ENST00000399635.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TSSK2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TSSK2-001"; exon_number 1; exon_id "ENSE00001539405.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13755.1"; havana_gene "OTTHUMG00000150118.1"; havana_transcript "OTTHUMT00000316431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3015 chr22 HAVANA start_codon 19118913 19118915 . + 0 gene_id "ENSG00000206203.3"; transcript_id "ENST00000399635.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TSSK2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TSSK2-001"; exon_number 1; exon_id "ENSE00001539405.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13755.1"; havana_gene "OTTHUMG00000150118.1"; havana_transcript "OTTHUMT00000316431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3016 chr22 HAVANA stop_codon 19119987 19119989 . + 0 gene_id "ENSG00000206203.3"; transcript_id "ENST00000399635.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TSSK2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TSSK2-001"; exon_number 1; exon_id "ENSE00001539405.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13755.1"; havana_gene "OTTHUMG00000150118.1"; havana_transcript "OTTHUMT00000316431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3017 chr22 HAVANA UTR 19118321 19118912 . + . gene_id "ENSG00000206203.3"; transcript_id "ENST00000399635.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TSSK2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TSSK2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13755.1"; havana_gene "OTTHUMG00000150118.1"; havana_transcript "OTTHUMT00000316431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3018 chr22 HAVANA UTR 19119987 19120134 . + . gene_id "ENSG00000206203.3"; transcript_id "ENST00000399635.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TSSK2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TSSK2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13755.1"; havana_gene "OTTHUMG00000150118.1"; havana_transcript "OTTHUMT00000316431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3019 chr22 HAVANA gene 19136089 19137796 . - . gene_id "ENSG00000063515.2"; transcript_id "ENSG00000063515.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSC2"; level 2; havana_gene "OTTHUMG00000150122.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3020 chr22 HAVANA transcript 19136089 19137796 . - . gene_id "ENSG00000063515.2"; transcript_id "ENST00000086933.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSC2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13757.1"; havana_gene "OTTHUMG00000150122.2"; havana_transcript "OTTHUMT00000316440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3021 chr22 HAVANA exon 19137538 19137796 . - . gene_id "ENSG00000063515.2"; transcript_id "ENST00000086933.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSC2-001"; exon_number 1; exon_id "ENSE00000650652.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13757.1"; havana_gene "OTTHUMG00000150122.2"; havana_transcript "OTTHUMT00000316440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3022 chr22 HAVANA CDS 19137538 19137796 . - 0 gene_id "ENSG00000063515.2"; transcript_id "ENST00000086933.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSC2-001"; exon_number 1; exon_id "ENSE00000650652.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13757.1"; havana_gene "OTTHUMG00000150122.2"; havana_transcript "OTTHUMT00000316440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3023 chr22 HAVANA start_codon 19137794 19137796 . - 0 gene_id "ENSG00000063515.2"; transcript_id "ENST00000086933.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSC2-001"; exon_number 1; exon_id "ENSE00000650652.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13757.1"; havana_gene "OTTHUMG00000150122.2"; havana_transcript "OTTHUMT00000316440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3024 chr22 HAVANA exon 19137176 19137429 . - . gene_id "ENSG00000063515.2"; transcript_id "ENST00000086933.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSC2-001"; exon_number 2; exon_id "ENSE00000650651.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13757.1"; havana_gene "OTTHUMG00000150122.2"; havana_transcript "OTTHUMT00000316440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3025 chr22 HAVANA CDS 19137176 19137429 . - 2 gene_id "ENSG00000063515.2"; transcript_id "ENST00000086933.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSC2-001"; exon_number 2; exon_id "ENSE00000650651.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13757.1"; havana_gene "OTTHUMG00000150122.2"; havana_transcript "OTTHUMT00000316440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3026 chr22 HAVANA exon 19136089 19136608 . - . gene_id "ENSG00000063515.2"; transcript_id "ENST00000086933.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSC2-001"; exon_number 3; exon_id "ENSE00000331106.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13757.1"; havana_gene "OTTHUMG00000150122.2"; havana_transcript "OTTHUMT00000316440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3027 chr22 HAVANA CDS 19136507 19136608 . - 0 gene_id "ENSG00000063515.2"; transcript_id "ENST00000086933.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSC2-001"; exon_number 3; exon_id "ENSE00000331106.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13757.1"; havana_gene "OTTHUMG00000150122.2"; havana_transcript "OTTHUMT00000316440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3028 chr22 HAVANA stop_codon 19136504 19136506 . - 0 gene_id "ENSG00000063515.2"; transcript_id "ENST00000086933.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSC2-001"; exon_number 3; exon_id "ENSE00000331106.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13757.1"; havana_gene "OTTHUMG00000150122.2"; havana_transcript "OTTHUMT00000316440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3029 chr22 HAVANA UTR 19136089 19136506 . - . gene_id "ENSG00000063515.2"; transcript_id "ENST00000086933.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSC2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13757.1"; havana_gene "OTTHUMG00000150122.2"; havana_transcript "OTTHUMT00000316440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3030 chr22 HAVANA gene 19158908 19160352 . + . gene_id "ENSG00000260924.2"; transcript_id "ENSG00000260924.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "AC004463.6"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC004463.6"; level 2; havana_gene "OTTHUMG00000172740.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3031 chr22 HAVANA transcript 19158908 19160352 . + . gene_id "ENSG00000260924.2"; transcript_id "ENST00000565162.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "AC004463.6"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC004463.6-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000172740.2"; havana_transcript "OTTHUMT00000420341.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3032 chr22 HAVANA exon 19158908 19160352 . + . gene_id "ENSG00000260924.2"; transcript_id "ENST00000565162.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "AC004463.6"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC004463.6-001"; exon_number 1; exon_id "ENSE00002600058.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000172740.2"; havana_transcript "OTTHUMT00000420341.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3033 chr22 HAVANA gene 19163095 19166343 . - . gene_id "ENSG00000100075.5"; transcript_id "ENSG00000100075.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1"; level 2; havana_gene "OTTHUMG00000150123.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3034 chr22 HAVANA transcript 19163095 19166343 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3035 chr22 HAVANA exon 19166093 19166343 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 1; exon_id "ENSE00001140789.6"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3036 chr22 HAVANA CDS 19166093 19166186 . - 0 gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 1; exon_id "ENSE00001140789.6"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3037 chr22 HAVANA start_codon 19166184 19166186 . - 0 gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 1; exon_id "ENSE00001140789.6"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3038 chr22 HAVANA exon 19165646 19165753 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 2; exon_id "ENSE00003563318.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3039 chr22 HAVANA CDS 19165646 19165753 . - 2 gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 2; exon_id "ENSE00003563318.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3040 chr22 HAVANA exon 19165455 19165554 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 3; exon_id "ENSE00003518231.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3041 chr22 HAVANA CDS 19165455 19165554 . - 2 gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 3; exon_id "ENSE00003518231.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3042 chr22 HAVANA exon 19165240 19165378 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 4; exon_id "ENSE00003599535.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3043 chr22 HAVANA CDS 19165240 19165378 . - 1 gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 4; exon_id "ENSE00003599535.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3044 chr22 HAVANA exon 19164633 19164717 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 5; exon_id "ENSE00003606919.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3045 chr22 HAVANA CDS 19164633 19164717 . - 0 gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 5; exon_id "ENSE00003606919.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3046 chr22 HAVANA exon 19164359 19164463 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 6; exon_id "ENSE00003467134.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3047 chr22 HAVANA CDS 19164359 19164463 . - 2 gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 6; exon_id "ENSE00003467134.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3048 chr22 HAVANA exon 19164091 19164206 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 7; exon_id "ENSE00003501561.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3049 chr22 HAVANA CDS 19164091 19164206 . - 2 gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 7; exon_id "ENSE00003501561.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3050 chr22 HAVANA exon 19163934 19164007 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 8; exon_id "ENSE00003518915.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3051 chr22 HAVANA CDS 19163934 19164007 . - 0 gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 8; exon_id "ENSE00003518915.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3052 chr22 HAVANA exon 19163095 19163757 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 9; exon_id "ENSE00001637785.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3053 chr22 HAVANA CDS 19163646 19163757 . - 1 gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 9; exon_id "ENSE00001637785.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3054 chr22 HAVANA stop_codon 19163643 19163645 . - 0 gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; exon_number 9; exon_id "ENSE00001637785.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3055 chr22 HAVANA UTR 19166187 19166343 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3056 chr22 HAVANA UTR 19163095 19163645 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000215882.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC25A1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13758.1"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3057 chr22 HAVANA transcript 19163106 19166034 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3058 chr22 HAVANA exon 19165900 19166034 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 1; exon_id "ENSE00001719545.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3059 chr22 HAVANA exon 19165646 19165753 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 2; exon_id "ENSE00003536951.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3060 chr22 HAVANA exon 19165455 19165554 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 3; exon_id "ENSE00003458349.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3061 chr22 HAVANA exon 19165240 19165378 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 4; exon_id "ENSE00003635007.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3062 chr22 HAVANA CDS 19165240 19165371 . - 0 gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 4; exon_id "ENSE00003635007.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3063 chr22 HAVANA start_codon 19165369 19165371 . - 0 gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 4; exon_id "ENSE00003635007.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3064 chr22 HAVANA exon 19164633 19164717 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 5; exon_id "ENSE00003606919.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3065 chr22 HAVANA CDS 19164633 19164717 . - 0 gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 5; exon_id "ENSE00003606919.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3066 chr22 HAVANA exon 19164359 19164463 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 6; exon_id "ENSE00003467134.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3067 chr22 HAVANA CDS 19164359 19164463 . - 2 gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 6; exon_id "ENSE00003467134.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3068 chr22 HAVANA exon 19164091 19164206 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 7; exon_id "ENSE00003501561.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3069 chr22 HAVANA CDS 19164091 19164206 . - 2 gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 7; exon_id "ENSE00003501561.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3070 chr22 HAVANA exon 19163934 19164007 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 8; exon_id "ENSE00003518915.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3071 chr22 HAVANA CDS 19163934 19164007 . - 0 gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 8; exon_id "ENSE00003518915.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3072 chr22 HAVANA exon 19163106 19163757 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 9; exon_id "ENSE00001654792.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3073 chr22 HAVANA CDS 19163646 19163757 . - 1 gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 9; exon_id "ENSE00001654792.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3074 chr22 HAVANA stop_codon 19163643 19163645 . - 0 gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; exon_number 9; exon_id "ENSE00001654792.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3075 chr22 HAVANA UTR 19165900 19166034 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3076 chr22 HAVANA UTR 19165646 19165753 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3077 chr22 HAVANA UTR 19165455 19165554 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3078 chr22 HAVANA UTR 19165372 19165378 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3079 chr22 HAVANA UTR 19163106 19163645 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000451283.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316443.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3080 chr22 HAVANA transcript 19163123 19166252 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000470922.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC25A1-002"; level 2; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316442.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3081 chr22 HAVANA exon 19166093 19166252 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000470922.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC25A1-002"; exon_number 1; exon_id "ENSE00001876613.1"; level 2; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316442.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3082 chr22 HAVANA exon 19165646 19165753 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000470922.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC25A1-002"; exon_number 2; exon_id "ENSE00003536951.1"; level 2; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316442.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3083 chr22 HAVANA exon 19165240 19165554 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000470922.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC25A1-002"; exon_number 3; exon_id "ENSE00001878247.1"; level 2; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316442.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3084 chr22 HAVANA exon 19164633 19164717 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000470922.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC25A1-002"; exon_number 4; exon_id "ENSE00003471958.1"; level 2; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316442.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3085 chr22 HAVANA exon 19164359 19164463 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000470922.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC25A1-002"; exon_number 5; exon_id "ENSE00003497661.1"; level 2; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316442.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3086 chr22 HAVANA exon 19164091 19164206 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000470922.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC25A1-002"; exon_number 6; exon_id "ENSE00003505547.1"; level 2; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316442.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3087 chr22 HAVANA exon 19163934 19164007 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000470922.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC25A1-002"; exon_number 7; exon_id "ENSE00003510484.1"; level 2; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316442.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3088 chr22 HAVANA exon 19163123 19163757 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000470922.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC25A1-002"; exon_number 8; exon_id "ENSE00001934683.1"; level 2; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316442.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3089 chr22 HAVANA transcript 19164180 19165993 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000461267.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316445.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3090 chr22 HAVANA exon 19165646 19165993 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000461267.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-005"; exon_number 1; exon_id "ENSE00001843099.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316445.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3091 chr22 HAVANA exon 19165455 19165554 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000461267.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-005"; exon_number 2; exon_id "ENSE00003458349.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316445.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3092 chr22 HAVANA exon 19165240 19165378 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000461267.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-005"; exon_number 3; exon_id "ENSE00003474064.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316445.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3093 chr22 HAVANA exon 19164633 19164717 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000461267.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-005"; exon_number 4; exon_id "ENSE00003471958.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316445.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3094 chr22 HAVANA exon 19164359 19164463 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000461267.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-005"; exon_number 5; exon_id "ENSE00003497661.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316445.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3095 chr22 HAVANA exon 19164180 19164206 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000461267.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-005"; exon_number 6; exon_id "ENSE00001941253.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316445.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3096 chr22 HAVANA transcript 19165503 19166148 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000468824.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-004"; level 2; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316444.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3097 chr22 HAVANA exon 19166093 19166148 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000468824.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-004"; exon_number 1; exon_id "ENSE00001884712.1"; level 2; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316444.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3098 chr22 HAVANA exon 19165503 19165753 . - . gene_id "ENSG00000100075.5"; transcript_id "ENST00000468824.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC25A1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SLC25A1-004"; exon_number 2; exon_id "ENSE00001940895.1"; level 2; havana_gene "OTTHUMG00000150123.2"; havana_transcript "OTTHUMT00000316444.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3099 chr22 HAVANA gene 19166986 19279239 . - . gene_id "ENSG00000070371.11"; transcript_id "ENSG00000070371.11"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1"; level 2; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3100 chr22 HAVANA transcript 19166986 19279208 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3101 chr22 HAVANA exon 19279123 19279208 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 1; exon_id "ENSE00001757507.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3102 chr22 HAVANA CDS 19279123 19279164 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 1; exon_id "ENSE00001757507.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3103 chr22 HAVANA start_codon 19279162 19279164 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 1; exon_id "ENSE00001757507.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3104 chr22 HAVANA exon 19263146 19263353 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 2; exon_id "ENSE00003681145.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3105 chr22 HAVANA CDS 19263146 19263353 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 2; exon_id "ENSE00003681145.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3106 chr22 HAVANA exon 19241482 19241750 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 3; exon_id "ENSE00003489598.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3107 chr22 HAVANA CDS 19241482 19241750 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 3; exon_id "ENSE00003489598.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3108 chr22 HAVANA exon 19230298 19230459 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 4; exon_id "ENSE00003684706.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3109 chr22 HAVANA CDS 19230298 19230459 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 4; exon_id "ENSE00003684706.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3110 chr22 HAVANA exon 19226798 19226911 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 5; exon_id "ENSE00003606182.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3111 chr22 HAVANA CDS 19226798 19226911 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 5; exon_id "ENSE00003606182.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3112 chr22 HAVANA exon 19223219 19223392 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 6; exon_id "ENSE00003490030.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3113 chr22 HAVANA CDS 19223219 19223392 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 6; exon_id "ENSE00003490030.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3114 chr22 HAVANA exon 19222032 19222229 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 7; exon_id "ENSE00003621505.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3115 chr22 HAVANA CDS 19222032 19222229 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 7; exon_id "ENSE00003621505.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3116 chr22 HAVANA exon 19220945 19221145 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 8; exon_id "ENSE00003584177.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3117 chr22 HAVANA CDS 19220945 19221145 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 8; exon_id "ENSE00003584177.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3118 chr22 HAVANA exon 19220689 19220841 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 9; exon_id "ENSE00003583442.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3119 chr22 HAVANA CDS 19220689 19220841 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 9; exon_id "ENSE00003583442.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3120 chr22 HAVANA exon 19219999 19220121 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 10; exon_id "ENSE00003666384.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3121 chr22 HAVANA CDS 19219999 19220121 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 10; exon_id "ENSE00003666384.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3122 chr22 HAVANA exon 19217361 19217498 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 11; exon_id "ENSE00003672115.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3123 chr22 HAVANA CDS 19217361 19217498 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 11; exon_id "ENSE00003672115.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3124 chr22 HAVANA exon 19213742 19213906 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 12; exon_id "ENSE00003581663.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3125 chr22 HAVANA CDS 19213742 19213906 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 12; exon_id "ENSE00003581663.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3126 chr22 HAVANA exon 19212976 19213156 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 13; exon_id "ENSE00003484096.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3127 chr22 HAVANA CDS 19212976 19213156 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 13; exon_id "ENSE00003484096.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3128 chr22 HAVANA exon 19211414 19211577 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 14; exon_id "ENSE00003549343.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3129 chr22 HAVANA CDS 19211414 19211577 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 14; exon_id "ENSE00003549343.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3130 chr22 HAVANA exon 19210207 19210332 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 15; exon_id "ENSE00003481354.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3131 chr22 HAVANA CDS 19210207 19210332 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 15; exon_id "ENSE00003481354.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3132 chr22 HAVANA exon 19209474 19209616 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 16; exon_id "ENSE00003632499.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3133 chr22 HAVANA CDS 19209474 19209616 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 16; exon_id "ENSE00003632499.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3134 chr22 HAVANA exon 19208900 19209134 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 17; exon_id "ENSE00003497518.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3135 chr22 HAVANA CDS 19208900 19209134 . - 1 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 17; exon_id "ENSE00003497518.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3136 chr22 HAVANA exon 19207394 19207516 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 18; exon_id "ENSE00003599861.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3137 chr22 HAVANA CDS 19207394 19207516 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 18; exon_id "ENSE00003599861.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3138 chr22 HAVANA exon 19203621 19203766 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 19; exon_id "ENSE00003675914.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3139 chr22 HAVANA CDS 19203621 19203766 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 19; exon_id "ENSE00003675914.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3140 chr22 HAVANA exon 19197836 19198019 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 20; exon_id "ENSE00003610933.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3141 chr22 HAVANA CDS 19197836 19198019 . - 1 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 20; exon_id "ENSE00003610933.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3142 chr22 HAVANA exon 19196432 19196624 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 21; exon_id "ENSE00003521856.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3143 chr22 HAVANA CDS 19196432 19196624 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 21; exon_id "ENSE00003521856.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3144 chr22 HAVANA exon 19195664 19195821 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 22; exon_id "ENSE00003472346.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3145 chr22 HAVANA CDS 19195664 19195821 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 22; exon_id "ENSE00003472346.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3146 chr22 HAVANA exon 19188840 19189004 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 23; exon_id "ENSE00003505559.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3147 chr22 HAVANA CDS 19188840 19189004 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 23; exon_id "ENSE00003505559.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3148 chr22 HAVANA exon 19187245 19187352 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 24; exon_id "ENSE00003673808.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3149 chr22 HAVANA CDS 19187245 19187352 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 24; exon_id "ENSE00003673808.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3150 chr22 HAVANA exon 19184000 19184167 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 25; exon_id "ENSE00003473706.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3151 chr22 HAVANA CDS 19184000 19184167 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 25; exon_id "ENSE00003473706.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3152 chr22 HAVANA exon 19183777 19183926 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 26; exon_id "ENSE00003542749.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3153 chr22 HAVANA CDS 19183777 19183926 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 26; exon_id "ENSE00003542749.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3154 chr22 HAVANA exon 19178816 19178947 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 27; exon_id "ENSE00003542885.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3155 chr22 HAVANA CDS 19178816 19178947 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 27; exon_id "ENSE00003542885.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3156 chr22 HAVANA exon 19175493 19175603 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 28; exon_id "ENSE00003480409.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3157 chr22 HAVANA CDS 19175493 19175603 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 28; exon_id "ENSE00003480409.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3158 chr22 HAVANA exon 19170903 19171124 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 29; exon_id "ENSE00003471523.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3159 chr22 HAVANA CDS 19170903 19171124 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 29; exon_id "ENSE00003471523.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3160 chr22 HAVANA exon 19168244 19168319 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 30; exon_id "ENSE00003612308.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3161 chr22 HAVANA CDS 19168244 19168319 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 30; exon_id "ENSE00003612308.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3162 chr22 HAVANA exon 19167712 19167751 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 31; exon_id "ENSE00003532078.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3163 chr22 HAVANA CDS 19167735 19167751 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 31; exon_id "ENSE00003532078.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3164 chr22 HAVANA stop_codon 19167732 19167734 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 31; exon_id "ENSE00003532078.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3165 chr22 HAVANA exon 19166986 19167482 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; exon_number 32; exon_id "ENSE00001709011.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3166 chr22 HAVANA UTR 19279165 19279208 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3167 chr22 HAVANA UTR 19167712 19167734 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3168 chr22 HAVANA UTR 19166986 19167482 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000353891.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-002"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "CCDS"; ccdsid "CCDS54497.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316398.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3169 chr22 HAVANA transcript 19166986 19279237 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3170 chr22 HAVANA exon 19279123 19279237 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 1; exon_id "ENSE00001772986.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3171 chr22 HAVANA CDS 19279123 19279164 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 1; exon_id "ENSE00001772986.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3172 chr22 HAVANA start_codon 19279162 19279164 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 1; exon_id "ENSE00001772986.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3173 chr22 HAVANA exon 19263146 19263353 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 2; exon_id "ENSE00003681145.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3174 chr22 HAVANA CDS 19263146 19263353 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 2; exon_id "ENSE00003681145.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3175 chr22 HAVANA exon 19241482 19241750 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 3; exon_id "ENSE00003489598.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3176 chr22 HAVANA CDS 19241482 19241750 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 3; exon_id "ENSE00003489598.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3177 chr22 HAVANA exon 19230298 19230459 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 4; exon_id "ENSE00003684706.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3178 chr22 HAVANA CDS 19230298 19230459 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 4; exon_id "ENSE00003684706.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3179 chr22 HAVANA exon 19226798 19226911 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 5; exon_id "ENSE00003606182.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3180 chr22 HAVANA CDS 19226798 19226911 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 5; exon_id "ENSE00003606182.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3181 chr22 HAVANA exon 19223219 19223392 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 6; exon_id "ENSE00003490030.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3182 chr22 HAVANA CDS 19223219 19223392 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 6; exon_id "ENSE00003490030.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3183 chr22 HAVANA exon 19222032 19222229 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 7; exon_id "ENSE00003621505.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3184 chr22 HAVANA CDS 19222032 19222229 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 7; exon_id "ENSE00003621505.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3185 chr22 HAVANA exon 19220945 19221145 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 8; exon_id "ENSE00003584177.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3186 chr22 HAVANA CDS 19220945 19221145 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 8; exon_id "ENSE00003584177.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3187 chr22 HAVANA exon 19220689 19220841 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 9; exon_id "ENSE00003583442.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3188 chr22 HAVANA CDS 19220689 19220841 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 9; exon_id "ENSE00003583442.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3189 chr22 HAVANA exon 19219999 19220121 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 10; exon_id "ENSE00003666384.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3190 chr22 HAVANA CDS 19219999 19220121 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 10; exon_id "ENSE00003666384.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3191 chr22 HAVANA exon 19217361 19217498 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 11; exon_id "ENSE00003672115.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3192 chr22 HAVANA CDS 19217361 19217498 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 11; exon_id "ENSE00003672115.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3193 chr22 HAVANA exon 19213742 19213906 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 12; exon_id "ENSE00003581663.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3194 chr22 HAVANA CDS 19213742 19213906 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 12; exon_id "ENSE00003581663.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3195 chr22 HAVANA exon 19212976 19213156 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 13; exon_id "ENSE00003484096.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3196 chr22 HAVANA CDS 19212976 19213156 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 13; exon_id "ENSE00003484096.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3197 chr22 HAVANA exon 19211414 19211577 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 14; exon_id "ENSE00003549343.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3198 chr22 HAVANA CDS 19211414 19211577 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 14; exon_id "ENSE00003549343.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3199 chr22 HAVANA exon 19210207 19210332 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 15; exon_id "ENSE00003481354.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3200 chr22 HAVANA CDS 19210207 19210332 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 15; exon_id "ENSE00003481354.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3201 chr22 HAVANA exon 19209474 19209616 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 16; exon_id "ENSE00003632499.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3202 chr22 HAVANA CDS 19209474 19209616 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 16; exon_id "ENSE00003632499.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3203 chr22 HAVANA exon 19208900 19209134 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 17; exon_id "ENSE00003497518.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3204 chr22 HAVANA CDS 19208900 19209134 . - 1 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 17; exon_id "ENSE00003497518.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3205 chr22 HAVANA exon 19207394 19207516 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 18; exon_id "ENSE00003599861.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3206 chr22 HAVANA CDS 19207394 19207516 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 18; exon_id "ENSE00003599861.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3207 chr22 HAVANA exon 19203621 19203766 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 19; exon_id "ENSE00003675914.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3208 chr22 HAVANA CDS 19203621 19203766 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 19; exon_id "ENSE00003675914.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3209 chr22 HAVANA exon 19197836 19198019 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 20; exon_id "ENSE00003610933.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3210 chr22 HAVANA CDS 19197836 19198019 . - 1 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 20; exon_id "ENSE00003610933.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3211 chr22 HAVANA exon 19196432 19196624 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 21; exon_id "ENSE00003521856.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3212 chr22 HAVANA CDS 19196432 19196624 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 21; exon_id "ENSE00003521856.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3213 chr22 HAVANA exon 19195664 19195821 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 22; exon_id "ENSE00003472346.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3214 chr22 HAVANA CDS 19195664 19195821 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 22; exon_id "ENSE00003472346.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3215 chr22 HAVANA exon 19188840 19189004 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 23; exon_id "ENSE00003505559.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3216 chr22 HAVANA CDS 19188840 19189004 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 23; exon_id "ENSE00003505559.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3217 chr22 HAVANA exon 19187245 19187352 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 24; exon_id "ENSE00003673808.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3218 chr22 HAVANA CDS 19187245 19187352 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 24; exon_id "ENSE00003673808.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3219 chr22 HAVANA exon 19184000 19184167 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 25; exon_id "ENSE00003473706.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3220 chr22 HAVANA CDS 19184000 19184167 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 25; exon_id "ENSE00003473706.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3221 chr22 HAVANA exon 19183777 19183926 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 26; exon_id "ENSE00003542749.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3222 chr22 HAVANA CDS 19183777 19183926 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 26; exon_id "ENSE00003542749.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3223 chr22 HAVANA exon 19178816 19178947 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 27; exon_id "ENSE00003542885.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3224 chr22 HAVANA CDS 19178816 19178947 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 27; exon_id "ENSE00003542885.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3225 chr22 HAVANA exon 19175493 19175603 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 28; exon_id "ENSE00003480409.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3226 chr22 HAVANA CDS 19175493 19175603 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 28; exon_id "ENSE00003480409.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3227 chr22 HAVANA exon 19175070 19175240 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 29; exon_id "ENSE00003487379.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3228 chr22 HAVANA CDS 19175070 19175240 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 29; exon_id "ENSE00003487379.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3229 chr22 HAVANA exon 19170903 19171124 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 30; exon_id "ENSE00003471523.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3230 chr22 HAVANA CDS 19170903 19171124 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 30; exon_id "ENSE00003471523.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3231 chr22 HAVANA exon 19168244 19168319 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 31; exon_id "ENSE00003612308.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3232 chr22 HAVANA CDS 19168244 19168319 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 31; exon_id "ENSE00003612308.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3233 chr22 HAVANA exon 19167712 19167751 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 32; exon_id "ENSE00003532078.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3234 chr22 HAVANA CDS 19167735 19167751 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 32; exon_id "ENSE00003532078.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3235 chr22 HAVANA stop_codon 19167732 19167734 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 32; exon_id "ENSE00003532078.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3236 chr22 HAVANA exon 19166986 19167482 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; exon_number 33; exon_id "ENSE00001709011.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3237 chr22 HAVANA UTR 19279165 19279237 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3238 chr22 HAVANA UTR 19167712 19167734 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3239 chr22 HAVANA UTR 19166986 19167482 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000263200.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-001"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46662.1"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316397.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3240 chr22 HAVANA transcript 19166989 19172344 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000412649.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-003"; level 2; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3241 chr22 HAVANA exon 19168244 19172344 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000412649.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-003"; exon_number 1; exon_id "ENSE00001679089.1"; level 2; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3242 chr22 HAVANA exon 19167712 19167751 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000412649.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-003"; exon_number 2; exon_id "ENSE00003502963.1"; level 2; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3243 chr22 HAVANA exon 19166989 19167482 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000412649.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-003"; exon_number 3; exon_id "ENSE00001309548.3"; level 2; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3244 chr22 HAVANA transcript 19166989 19195186 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000442042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-009"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398423.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3245 chr22 HAVANA exon 19195028 19195186 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000442042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-009"; exon_number 1; exon_id "ENSE00002276181.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398423.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3246 chr22 HAVANA exon 19188840 19189004 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000442042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-009"; exon_number 2; exon_id "ENSE00003611626.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398423.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3247 chr22 HAVANA exon 19187245 19187352 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000442042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-009"; exon_number 3; exon_id "ENSE00003622605.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398423.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3248 chr22 HAVANA exon 19184000 19184167 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000442042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-009"; exon_number 4; exon_id "ENSE00003605532.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398423.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3249 chr22 HAVANA exon 19183777 19183926 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000442042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-009"; exon_number 5; exon_id "ENSE00003657810.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398423.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3250 chr22 HAVANA exon 19178816 19178947 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000442042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-009"; exon_number 6; exon_id "ENSE00003558613.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398423.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3251 chr22 HAVANA exon 19170903 19171124 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000442042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-009"; exon_number 7; exon_id "ENSE00003546044.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398423.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3252 chr22 HAVANA exon 19168244 19168319 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000442042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-009"; exon_number 8; exon_id "ENSE00003682120.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398423.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3253 chr22 HAVANA exon 19167712 19167751 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000442042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-009"; exon_number 9; exon_id "ENSE00003502963.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398423.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3254 chr22 HAVANA exon 19166989 19167482 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000442042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-009"; exon_number 10; exon_id "ENSE00001309548.3"; level 2; tag "non_canonical_genome_sequence_error"; tag "basic"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398423.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3255 chr22 ENSEMBL transcript 19166989 19279239 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3256 chr22 ENSEMBL exon 19279123 19279239 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 1; exon_id "ENSE00002273833.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3257 chr22 ENSEMBL CDS 19279123 19279164 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 1; exon_id "ENSE00002273833.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3258 chr22 ENSEMBL start_codon 19279162 19279164 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 1; exon_id "ENSE00002273833.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3259 chr22 ENSEMBL exon 19263146 19263353 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 2; exon_id "ENSE00003681145.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3260 chr22 ENSEMBL CDS 19263146 19263353 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 2; exon_id "ENSE00003681145.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3261 chr22 ENSEMBL exon 19241482 19241750 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 3; exon_id "ENSE00003489598.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3262 chr22 ENSEMBL CDS 19241482 19241750 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 3; exon_id "ENSE00003489598.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3263 chr22 ENSEMBL exon 19230298 19230459 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 4; exon_id "ENSE00003684706.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3264 chr22 ENSEMBL CDS 19230298 19230459 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 4; exon_id "ENSE00003684706.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3265 chr22 ENSEMBL exon 19226798 19226911 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 5; exon_id "ENSE00003606182.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3266 chr22 ENSEMBL CDS 19226798 19226911 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 5; exon_id "ENSE00003606182.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3267 chr22 ENSEMBL exon 19223219 19223392 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 6; exon_id "ENSE00003490030.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3268 chr22 ENSEMBL CDS 19223219 19223392 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 6; exon_id "ENSE00003490030.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3269 chr22 ENSEMBL exon 19222032 19222229 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 7; exon_id "ENSE00003621505.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3270 chr22 ENSEMBL CDS 19222032 19222229 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 7; exon_id "ENSE00003621505.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3271 chr22 ENSEMBL exon 19220945 19221145 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 8; exon_id "ENSE00003584177.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3272 chr22 ENSEMBL CDS 19220945 19221145 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 8; exon_id "ENSE00003584177.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3273 chr22 ENSEMBL exon 19220689 19220841 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 9; exon_id "ENSE00003583442.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3274 chr22 ENSEMBL CDS 19220689 19220841 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 9; exon_id "ENSE00003583442.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3275 chr22 ENSEMBL exon 19219999 19220121 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 10; exon_id "ENSE00003666384.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3276 chr22 ENSEMBL CDS 19219999 19220121 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 10; exon_id "ENSE00003666384.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3277 chr22 ENSEMBL exon 19217361 19217498 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 11; exon_id "ENSE00003672115.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3278 chr22 ENSEMBL CDS 19217361 19217498 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 11; exon_id "ENSE00003672115.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3279 chr22 ENSEMBL exon 19213742 19213906 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 12; exon_id "ENSE00003581663.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3280 chr22 ENSEMBL CDS 19213742 19213906 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 12; exon_id "ENSE00003581663.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3281 chr22 ENSEMBL exon 19212976 19213156 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 13; exon_id "ENSE00003484096.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3282 chr22 ENSEMBL CDS 19212976 19213156 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 13; exon_id "ENSE00003484096.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3283 chr22 ENSEMBL exon 19211414 19211577 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 14; exon_id "ENSE00003549343.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3284 chr22 ENSEMBL CDS 19211414 19211577 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 14; exon_id "ENSE00003549343.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3285 chr22 ENSEMBL exon 19210207 19210332 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 15; exon_id "ENSE00003481354.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3286 chr22 ENSEMBL CDS 19210207 19210332 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 15; exon_id "ENSE00003481354.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3287 chr22 ENSEMBL exon 19209474 19209616 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 16; exon_id "ENSE00003632499.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3288 chr22 ENSEMBL CDS 19209474 19209616 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 16; exon_id "ENSE00003632499.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3289 chr22 ENSEMBL exon 19208900 19209134 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 17; exon_id "ENSE00003497518.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3290 chr22 ENSEMBL CDS 19208900 19209134 . - 1 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 17; exon_id "ENSE00003497518.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3291 chr22 ENSEMBL exon 19207394 19207516 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 18; exon_id "ENSE00003599861.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3292 chr22 ENSEMBL CDS 19207394 19207516 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 18; exon_id "ENSE00003599861.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3293 chr22 ENSEMBL exon 19203621 19203766 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 19; exon_id "ENSE00003675914.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3294 chr22 ENSEMBL CDS 19203621 19203766 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 19; exon_id "ENSE00003675914.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3295 chr22 ENSEMBL exon 19197836 19198019 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 20; exon_id "ENSE00003610933.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3296 chr22 ENSEMBL CDS 19197836 19198019 . - 1 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 20; exon_id "ENSE00003610933.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3297 chr22 ENSEMBL exon 19196432 19196624 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 21; exon_id "ENSE00003521856.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3298 chr22 ENSEMBL CDS 19196432 19196624 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 21; exon_id "ENSE00003521856.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3299 chr22 ENSEMBL exon 19195664 19195821 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 22; exon_id "ENSE00003472346.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3300 chr22 ENSEMBL CDS 19195664 19195821 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 22; exon_id "ENSE00003472346.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3301 chr22 ENSEMBL exon 19195526 19195532 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 23; exon_id "ENSE00001608599.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3302 chr22 ENSEMBL CDS 19195526 19195532 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 23; exon_id "ENSE00001608599.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3303 chr22 ENSEMBL exon 19188840 19188997 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 24; exon_id "ENSE00001327638.2"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3304 chr22 ENSEMBL CDS 19188840 19188997 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 24; exon_id "ENSE00001327638.2"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3305 chr22 ENSEMBL exon 19187245 19187352 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 25; exon_id "ENSE00003673808.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3306 chr22 ENSEMBL CDS 19187245 19187352 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 25; exon_id "ENSE00003673808.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3307 chr22 ENSEMBL exon 19184000 19184167 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 26; exon_id "ENSE00003473706.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3308 chr22 ENSEMBL CDS 19184000 19184167 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 26; exon_id "ENSE00003473706.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3309 chr22 ENSEMBL exon 19183777 19183926 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 27; exon_id "ENSE00003542749.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3310 chr22 ENSEMBL CDS 19183777 19183926 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 27; exon_id "ENSE00003542749.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3311 chr22 ENSEMBL exon 19178816 19178947 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 28; exon_id "ENSE00003542885.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3312 chr22 ENSEMBL CDS 19178816 19178947 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 28; exon_id "ENSE00003542885.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3313 chr22 ENSEMBL exon 19175493 19175603 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 29; exon_id "ENSE00003480409.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3314 chr22 ENSEMBL CDS 19175493 19175603 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 29; exon_id "ENSE00003480409.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3315 chr22 ENSEMBL exon 19175070 19175240 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 30; exon_id "ENSE00003487379.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3316 chr22 ENSEMBL CDS 19175070 19175240 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 30; exon_id "ENSE00003487379.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3317 chr22 ENSEMBL exon 19170903 19171124 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 31; exon_id "ENSE00003471523.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3318 chr22 ENSEMBL CDS 19170903 19171124 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 31; exon_id "ENSE00003471523.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3319 chr22 ENSEMBL exon 19168244 19168319 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 32; exon_id "ENSE00003612308.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3320 chr22 ENSEMBL CDS 19168244 19168319 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 32; exon_id "ENSE00003612308.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3321 chr22 ENSEMBL exon 19167712 19167751 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 33; exon_id "ENSE00003532078.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3322 chr22 ENSEMBL CDS 19167735 19167751 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 33; exon_id "ENSE00003532078.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3323 chr22 ENSEMBL stop_codon 19167732 19167734 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 33; exon_id "ENSE00003532078.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3324 chr22 ENSEMBL exon 19166989 19167482 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; exon_number 34; exon_id "ENSE00001309548.3"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3325 chr22 ENSEMBL UTR 19279165 19279239 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3326 chr22 ENSEMBL UTR 19167712 19167734 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3327 chr22 ENSEMBL UTR 19166989 19167482 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000427926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLTCL1-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150109.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3328 chr22 HAVANA transcript 19167288 19195184 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000536806.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-010"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3329 chr22 HAVANA exon 19195028 19195184 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000536806.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-010"; exon_number 1; exon_id "ENSE00002305310.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3330 chr22 HAVANA exon 19188840 19189004 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000536806.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-010"; exon_number 2; exon_id "ENSE00003611626.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3331 chr22 HAVANA exon 19187245 19187352 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000536806.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-010"; exon_number 3; exon_id "ENSE00003622605.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3332 chr22 HAVANA exon 19184000 19184167 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000536806.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-010"; exon_number 4; exon_id "ENSE00003605532.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3333 chr22 HAVANA exon 19183777 19183926 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000536806.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-010"; exon_number 5; exon_id "ENSE00003657810.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3334 chr22 HAVANA exon 19178816 19178947 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000536806.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-010"; exon_number 6; exon_id "ENSE00003558613.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3335 chr22 HAVANA exon 19175493 19175603 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000536806.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-010"; exon_number 7; exon_id "ENSE00003664552.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3336 chr22 HAVANA exon 19175070 19175240 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000536806.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-010"; exon_number 8; exon_id "ENSE00003671936.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3337 chr22 HAVANA exon 19170903 19171124 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000536806.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-010"; exon_number 9; exon_id "ENSE00003546044.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3338 chr22 HAVANA exon 19168244 19168319 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000536806.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-010"; exon_number 10; exon_id "ENSE00003682120.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3339 chr22 HAVANA exon 19167712 19167751 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000536806.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-010"; exon_number 11; exon_id "ENSE00003502963.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3340 chr22 HAVANA exon 19167288 19167482 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000536806.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLTCL1-010"; exon_number 12; exon_id "ENSE00002311950.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398424.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3341 chr22 HAVANA transcript 19168246 19279184 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3342 chr22 HAVANA exon 19279123 19279184 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 1; exon_id "ENSE00003645605.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3343 chr22 HAVANA exon 19263146 19263353 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 2; exon_id "ENSE00003596733.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3344 chr22 HAVANA exon 19241482 19241750 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 3; exon_id "ENSE00003486207.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3345 chr22 HAVANA exon 19230298 19230459 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 4; exon_id "ENSE00003555438.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3346 chr22 HAVANA exon 19226798 19226911 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 5; exon_id "ENSE00003561727.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3347 chr22 HAVANA exon 19223219 19223392 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 6; exon_id "ENSE00003575809.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3348 chr22 HAVANA exon 19222032 19222229 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 7; exon_id "ENSE00003507284.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3349 chr22 HAVANA exon 19220945 19221145 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 8; exon_id "ENSE00003561708.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3350 chr22 HAVANA exon 19220689 19220841 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 9; exon_id "ENSE00003639468.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3351 chr22 HAVANA exon 19219999 19220121 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 10; exon_id "ENSE00003552656.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3352 chr22 HAVANA exon 19217361 19217498 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 11; exon_id "ENSE00003641780.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3353 chr22 HAVANA exon 19213742 19213906 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 12; exon_id "ENSE00003565909.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3354 chr22 HAVANA exon 19212976 19213156 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 13; exon_id "ENSE00003477469.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3355 chr22 HAVANA exon 19211414 19211577 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 14; exon_id "ENSE00003662074.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3356 chr22 HAVANA exon 19210207 19210332 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 15; exon_id "ENSE00003510378.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3357 chr22 HAVANA exon 19209474 19209616 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 16; exon_id "ENSE00003522562.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3358 chr22 HAVANA exon 19208900 19209134 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 17; exon_id "ENSE00003626292.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3359 chr22 HAVANA exon 19207394 19207516 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 18; exon_id "ENSE00003479274.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3360 chr22 HAVANA exon 19203621 19203766 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 19; exon_id "ENSE00003476903.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3361 chr22 HAVANA exon 19197836 19198019 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 20; exon_id "ENSE00003591063.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3362 chr22 HAVANA exon 19196432 19196624 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 21; exon_id "ENSE00003529684.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3363 chr22 HAVANA exon 19195664 19195821 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 22; exon_id "ENSE00003682760.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3364 chr22 HAVANA exon 19188840 19189004 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 23; exon_id "ENSE00003611626.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3365 chr22 HAVANA exon 19187245 19187352 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 24; exon_id "ENSE00003622605.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3366 chr22 HAVANA exon 19183777 19184167 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 25; exon_id "ENSE00002302871.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3367 chr22 HAVANA exon 19178816 19178947 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 26; exon_id "ENSE00003558613.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3368 chr22 HAVANA exon 19175493 19175603 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 27; exon_id "ENSE00003664552.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3369 chr22 HAVANA exon 19175070 19175240 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 28; exon_id "ENSE00003671936.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3370 chr22 HAVANA exon 19170903 19171124 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 29; exon_id "ENSE00003546044.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3371 chr22 HAVANA exon 19168246 19168319 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000413132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-007"; exon_number 30; exon_id "ENSE00002319347.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398425.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3372 chr22 HAVANA transcript 19168246 19279184 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3373 chr22 HAVANA exon 19279123 19279184 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 1; exon_id "ENSE00003677450.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3374 chr22 HAVANA CDS 19279123 19279164 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 1; exon_id "ENSE00003677450.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3375 chr22 HAVANA start_codon 19279162 19279164 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 1; exon_id "ENSE00003677450.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3376 chr22 HAVANA exon 19263146 19263353 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 2; exon_id "ENSE00003681145.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3377 chr22 HAVANA CDS 19263146 19263353 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 2; exon_id "ENSE00003681145.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3378 chr22 HAVANA exon 19241482 19241750 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 3; exon_id "ENSE00003489598.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3379 chr22 HAVANA CDS 19241482 19241750 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 3; exon_id "ENSE00003489598.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3380 chr22 HAVANA exon 19230298 19230459 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 4; exon_id "ENSE00003684706.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3381 chr22 HAVANA CDS 19230298 19230459 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 4; exon_id "ENSE00003684706.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3382 chr22 HAVANA exon 19226798 19226911 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 5; exon_id "ENSE00003606182.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3383 chr22 HAVANA CDS 19226798 19226911 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 5; exon_id "ENSE00003606182.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3384 chr22 HAVANA exon 19223219 19223392 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 6; exon_id "ENSE00003490030.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3385 chr22 HAVANA CDS 19223219 19223392 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 6; exon_id "ENSE00003490030.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3386 chr22 HAVANA exon 19222032 19222229 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 7; exon_id "ENSE00003621505.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3387 chr22 HAVANA CDS 19222032 19222229 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 7; exon_id "ENSE00003621505.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3388 chr22 HAVANA exon 19220945 19221145 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 8; exon_id "ENSE00003584177.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3389 chr22 HAVANA CDS 19220945 19221145 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 8; exon_id "ENSE00003584177.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3390 chr22 HAVANA exon 19220689 19220841 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 9; exon_id "ENSE00003583442.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3391 chr22 HAVANA CDS 19220689 19220841 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 9; exon_id "ENSE00003583442.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3392 chr22 HAVANA exon 19219999 19220121 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 10; exon_id "ENSE00003666384.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3393 chr22 HAVANA CDS 19219999 19220121 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 10; exon_id "ENSE00003666384.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3394 chr22 HAVANA exon 19217361 19217498 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 11; exon_id "ENSE00003672115.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3395 chr22 HAVANA CDS 19217361 19217498 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 11; exon_id "ENSE00003672115.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3396 chr22 HAVANA exon 19213742 19213906 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 12; exon_id "ENSE00003581663.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3397 chr22 HAVANA CDS 19213742 19213906 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 12; exon_id "ENSE00003581663.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3398 chr22 HAVANA exon 19212976 19213156 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 13; exon_id "ENSE00003484096.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3399 chr22 HAVANA CDS 19212976 19213156 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 13; exon_id "ENSE00003484096.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3400 chr22 HAVANA exon 19211414 19211577 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 14; exon_id "ENSE00003549343.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3401 chr22 HAVANA CDS 19211414 19211577 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 14; exon_id "ENSE00003549343.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3402 chr22 HAVANA exon 19210207 19210332 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 15; exon_id "ENSE00003481354.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3403 chr22 HAVANA CDS 19210207 19210332 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 15; exon_id "ENSE00003481354.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3404 chr22 HAVANA exon 19209474 19209616 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 16; exon_id "ENSE00003632499.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3405 chr22 HAVANA CDS 19209474 19209616 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 16; exon_id "ENSE00003632499.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3406 chr22 HAVANA exon 19208900 19209134 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 17; exon_id "ENSE00003497518.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3407 chr22 HAVANA CDS 19208900 19209134 . - 1 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 17; exon_id "ENSE00003497518.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3408 chr22 HAVANA exon 19207394 19207516 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 18; exon_id "ENSE00003599861.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3409 chr22 HAVANA CDS 19207394 19207516 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 18; exon_id "ENSE00003599861.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3410 chr22 HAVANA exon 19203621 19203766 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 19; exon_id "ENSE00003675914.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3411 chr22 HAVANA CDS 19203621 19203766 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 19; exon_id "ENSE00003675914.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3412 chr22 HAVANA exon 19197836 19198019 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 20; exon_id "ENSE00003610933.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3413 chr22 HAVANA CDS 19197836 19198019 . - 1 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 20; exon_id "ENSE00003610933.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3414 chr22 HAVANA exon 19196432 19196624 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 21; exon_id "ENSE00003521856.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3415 chr22 HAVANA CDS 19196432 19196624 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 21; exon_id "ENSE00003521856.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3416 chr22 HAVANA exon 19195664 19195821 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 22; exon_id "ENSE00003472346.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3417 chr22 HAVANA CDS 19195664 19195821 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 22; exon_id "ENSE00003472346.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3418 chr22 HAVANA exon 19188902 19189004 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 23; exon_id "ENSE00002203976.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3419 chr22 HAVANA CDS 19188902 19189004 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 23; exon_id "ENSE00002203976.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3420 chr22 HAVANA exon 19187245 19187352 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 24; exon_id "ENSE00003636075.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3421 chr22 HAVANA CDS 19187276 19187352 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 24; exon_id "ENSE00003636075.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3422 chr22 HAVANA stop_codon 19187273 19187275 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 24; exon_id "ENSE00003636075.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3423 chr22 HAVANA exon 19184000 19184167 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 25; exon_id "ENSE00003605532.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3424 chr22 HAVANA exon 19183777 19183926 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 26; exon_id "ENSE00003657810.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3425 chr22 HAVANA exon 19178816 19178947 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 27; exon_id "ENSE00003558613.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3426 chr22 HAVANA exon 19175493 19175603 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 28; exon_id "ENSE00003664552.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3427 chr22 HAVANA exon 19175070 19175240 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 29; exon_id "ENSE00003671936.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3428 chr22 HAVANA exon 19170903 19171124 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 30; exon_id "ENSE00003546044.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3429 chr22 HAVANA exon 19168246 19168319 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; exon_number 31; exon_id "ENSE00002319347.1"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3430 chr22 HAVANA UTR 19279165 19279184 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3431 chr22 HAVANA UTR 19187245 19187275 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3432 chr22 HAVANA UTR 19184000 19184167 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3433 chr22 HAVANA UTR 19183777 19183926 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3434 chr22 HAVANA UTR 19178816 19178947 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3435 chr22 HAVANA UTR 19175493 19175603 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3436 chr22 HAVANA UTR 19175070 19175240 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3437 chr22 HAVANA UTR 19170903 19171124 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3438 chr22 HAVANA UTR 19168246 19168319 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000505027.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-008"; level 2; tag "non_canonical_genome_sequence_error"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3439 chr22 HAVANA transcript 19170989 19175240 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000538828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-013"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3440 chr22 HAVANA exon 19175070 19175240 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000538828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-013"; exon_number 1; exon_id "ENSE00003487379.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3441 chr22 HAVANA CDS 19175070 19175240 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000538828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-013"; exon_number 1; exon_id "ENSE00003487379.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3442 chr22 HAVANA exon 19171909 19172049 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000538828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-013"; exon_number 2; exon_id "ENSE00002279753.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3443 chr22 HAVANA CDS 19172020 19172049 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000538828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-013"; exon_number 2; exon_id "ENSE00002279753.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3444 chr22 HAVANA stop_codon 19172017 19172019 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000538828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-013"; exon_number 2; exon_id "ENSE00002279753.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3445 chr22 HAVANA exon 19170989 19171124 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000538828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-013"; exon_number 3; exon_id "ENSE00002228798.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3446 chr22 HAVANA UTR 19171909 19172019 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000538828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-013"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3447 chr22 HAVANA UTR 19170989 19171124 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000538828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-013"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3448 chr22 HAVANA transcript 19209096 19213843 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000458188.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-012"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3449 chr22 HAVANA exon 19213742 19213843 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000458188.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-012"; exon_number 1; exon_id "ENSE00002210208.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3450 chr22 HAVANA CDS 19213742 19213843 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000458188.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-012"; exon_number 1; exon_id "ENSE00002210208.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3451 chr22 HAVANA exon 19211414 19211577 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000458188.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-012"; exon_number 2; exon_id "ENSE00003474140.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3452 chr22 HAVANA CDS 19211551 19211577 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000458188.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-012"; exon_number 2; exon_id "ENSE00003474140.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3453 chr22 HAVANA stop_codon 19211548 19211550 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000458188.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-012"; exon_number 2; exon_id "ENSE00003474140.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3454 chr22 HAVANA exon 19210207 19210332 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000458188.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-012"; exon_number 3; exon_id "ENSE00003510378.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3455 chr22 HAVANA exon 19209474 19209616 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000458188.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-012"; exon_number 4; exon_id "ENSE00003522562.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3456 chr22 HAVANA exon 19209096 19209134 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000458188.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-012"; exon_number 5; exon_id "ENSE00002237841.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3457 chr22 HAVANA UTR 19211414 19211550 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000458188.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-012"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3458 chr22 HAVANA UTR 19210207 19210332 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000458188.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-012"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3459 chr22 HAVANA UTR 19209474 19209616 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000458188.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-012"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3460 chr22 HAVANA UTR 19209096 19209134 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000458188.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CLTCL1-012"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3461 chr22 HAVANA transcript 19217368 19220344 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000540896.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-011"; level 2; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3462 chr22 HAVANA exon 19219999 19220344 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000540896.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-011"; exon_number 1; exon_id "ENSE00002223283.1"; level 2; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3463 chr22 HAVANA exon 19217368 19217498 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000540896.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CLTCL1-011"; exon_number 2; exon_id "ENSE00002251633.1"; level 2; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000398429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3464 chr22 HAVANA transcript 19241557 19279239 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000449918.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CLTCL1-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316436.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3465 chr22 HAVANA exon 19279123 19279239 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000449918.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CLTCL1-004"; exon_number 1; exon_id "ENSE00002273833.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316436.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3466 chr22 HAVANA CDS 19279123 19279164 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000449918.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CLTCL1-004"; exon_number 1; exon_id "ENSE00002273833.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316436.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3467 chr22 HAVANA start_codon 19279162 19279164 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000449918.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CLTCL1-004"; exon_number 1; exon_id "ENSE00002273833.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316436.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3468 chr22 HAVANA exon 19263146 19263353 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000449918.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CLTCL1-004"; exon_number 2; exon_id "ENSE00003681145.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316436.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3469 chr22 HAVANA CDS 19263146 19263353 . - 0 gene_id "ENSG00000070371.11"; transcript_id "ENST00000449918.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CLTCL1-004"; exon_number 2; exon_id "ENSE00003681145.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316436.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3470 chr22 HAVANA exon 19245328 19245390 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000449918.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CLTCL1-004"; exon_number 3; exon_id "ENSE00002273629.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316436.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3471 chr22 HAVANA CDS 19245328 19245390 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000449918.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CLTCL1-004"; exon_number 3; exon_id "ENSE00002273629.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316436.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3472 chr22 HAVANA exon 19241557 19241750 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000449918.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CLTCL1-004"; exon_number 4; exon_id "ENSE00001789006.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316436.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3473 chr22 HAVANA CDS 19241557 19241750 . - 2 gene_id "ENSG00000070371.11"; transcript_id "ENST00000449918.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CLTCL1-004"; exon_number 4; exon_id "ENSE00001789006.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316436.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3474 chr22 HAVANA UTR 19279165 19279239 . - . gene_id "ENSG00000070371.11"; transcript_id "ENST00000449918.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLTCL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CLTCL1-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150109.6"; havana_transcript "OTTHUMT00000316436.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3475 chr22 HAVANA gene 19225966 19226262 . - . gene_id "ENSG00000230194.1"; transcript_id "ENSG00000230194.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000081.2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC000081.2"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3476 chr22 HAVANA transcript 19225966 19226262 . - . gene_id "ENSG00000230194.1"; transcript_id "ENST00000433141.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000081.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC000081.2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150110.1"; havana_transcript "OTTHUMT00000316401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3477 chr22 HAVANA exon 19225966 19226262 . - . gene_id "ENSG00000230194.1"; transcript_id "ENST00000433141.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000081.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC000081.2-001"; exon_number 1; exon_id "ENSE00001511313.2"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150110.1"; havana_transcript "OTTHUMT00000316401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3478 chr22 ENSEMBL gene 19237396 19237489 . + . gene_id "ENSG00000251940.1"; transcript_id "ENSG00000251940.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA15"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA15"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3479 chr22 ENSEMBL transcript 19237396 19237489 . + . gene_id "ENSG00000251940.1"; transcript_id "ENST00000516131.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA15"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA15.3-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3480 chr22 ENSEMBL exon 19237396 19237489 . + . gene_id "ENSG00000251940.1"; transcript_id "ENST00000516131.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA15"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA15.3-201"; exon_number 1; exon_id "ENSE00002088408.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3481 chr22 HAVANA gene 19245043 19246329 . + . gene_id "ENSG00000233471.2"; transcript_id "ENSG00000233471.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRT18P62"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "KRT18P62"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150111.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3482 chr22 HAVANA transcript 19245043 19246329 . + . gene_id "ENSG00000233471.2"; transcript_id "ENST00000446618.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRT18P62"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KRT18P62-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150111.1"; havana_transcript "OTTHUMT00000316402.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3483 chr22 HAVANA exon 19245043 19246329 . + . gene_id "ENSG00000233471.2"; transcript_id "ENST00000446618.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRT18P62"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KRT18P62-001"; exon_number 1; exon_id "ENSE00001714868.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150111.1"; havana_transcript "OTTHUMT00000316402.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3484 chr22 HAVANA gene 19318221 19435224 . - . gene_id "ENSG00000100084.10"; transcript_id "ENSG00000100084.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA"; level 2; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3485 chr22 HAVANA transcript 19318221 19419219 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3486 chr22 HAVANA exon 19418963 19419219 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 1; exon_id "ENSE00001333807.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3487 chr22 HAVANA CDS 19418963 19418999 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 1; exon_id "ENSE00001333807.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3488 chr22 HAVANA start_codon 19418997 19418999 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 1; exon_id "ENSE00001333807.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3489 chr22 HAVANA exon 19398239 19398301 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 2; exon_id "ENSE00003580891.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3490 chr22 HAVANA CDS 19398239 19398301 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 2; exon_id "ENSE00003580891.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3491 chr22 HAVANA exon 19396006 19396116 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 3; exon_id "ENSE00003575047.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3492 chr22 HAVANA CDS 19396006 19396116 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 3; exon_id "ENSE00003575047.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3493 chr22 HAVANA exon 19394707 19394797 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 4; exon_id "ENSE00003694241.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3494 chr22 HAVANA CDS 19394707 19394797 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 4; exon_id "ENSE00003694241.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3495 chr22 HAVANA exon 19393309 19393403 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 5; exon_id "ENSE00003595190.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3496 chr22 HAVANA CDS 19393309 19393403 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 5; exon_id "ENSE00003595190.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3497 chr22 HAVANA exon 19385515 19385610 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 6; exon_id "ENSE00003478207.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3498 chr22 HAVANA CDS 19385515 19385610 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 6; exon_id "ENSE00003478207.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3499 chr22 HAVANA exon 19384310 19384470 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 7; exon_id "ENSE00003518651.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3500 chr22 HAVANA CDS 19384310 19384470 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 7; exon_id "ENSE00003518651.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3501 chr22 HAVANA exon 19381865 19382032 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 8; exon_id "ENSE00003569982.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3502 chr22 HAVANA CDS 19381865 19382032 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 8; exon_id "ENSE00003569982.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3503 chr22 HAVANA exon 19379624 19379737 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 9; exon_id "ENSE00003650304.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3504 chr22 HAVANA CDS 19379624 19379737 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 9; exon_id "ENSE00003650304.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3505 chr22 HAVANA exon 19376007 19376077 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 10; exon_id "ENSE00003467908.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3506 chr22 HAVANA CDS 19376007 19376077 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 10; exon_id "ENSE00003467908.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3507 chr22 HAVANA exon 19375234 19375339 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 11; exon_id "ENSE00003484139.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3508 chr22 HAVANA CDS 19375234 19375339 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 11; exon_id "ENSE00003484139.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3509 chr22 HAVANA exon 19373044 19373259 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 12; exon_id "ENSE00003683638.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3510 chr22 HAVANA CDS 19373044 19373259 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 12; exon_id "ENSE00003683638.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3511 chr22 HAVANA exon 19371143 19371228 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 13; exon_id "ENSE00003470497.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3512 chr22 HAVANA CDS 19371143 19371228 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 13; exon_id "ENSE00003470497.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3513 chr22 HAVANA exon 19365392 19365589 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 14; exon_id "ENSE00003535922.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3514 chr22 HAVANA CDS 19365392 19365589 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 14; exon_id "ENSE00003535922.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3515 chr22 HAVANA exon 19363154 19363315 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 15; exon_id "ENSE00003567968.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3516 chr22 HAVANA CDS 19363154 19363315 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 15; exon_id "ENSE00003567968.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3517 chr22 HAVANA exon 19343753 19343811 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 16; exon_id "ENSE00003676847.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3518 chr22 HAVANA CDS 19343753 19343811 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 16; exon_id "ENSE00003676847.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3519 chr22 HAVANA exon 19343283 19343388 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 17; exon_id "ENSE00000650725.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3520 chr22 HAVANA CDS 19343283 19343388 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 17; exon_id "ENSE00000650725.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3521 chr22 HAVANA exon 19341519 19341641 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 18; exon_id "ENSE00003693401.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3522 chr22 HAVANA CDS 19341519 19341641 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 18; exon_id "ENSE00003693401.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3523 chr22 HAVANA exon 19340879 19341042 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 19; exon_id "ENSE00003580182.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3524 chr22 HAVANA CDS 19340879 19341042 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 19; exon_id "ENSE00003580182.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3525 chr22 HAVANA exon 19338881 19338969 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 20; exon_id "ENSE00000650719.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3526 chr22 HAVANA CDS 19338881 19338969 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 20; exon_id "ENSE00000650719.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3527 chr22 HAVANA exon 19318221 19319079 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 21; exon_id "ENSE00001229731.4"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3528 chr22 HAVANA CDS 19318966 19319079 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 21; exon_id "ENSE00001229731.4"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3529 chr22 HAVANA stop_codon 19318963 19318965 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; exon_number 21; exon_id "ENSE00001229731.4"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3530 chr22 HAVANA UTR 19419000 19419219 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3531 chr22 HAVANA UTR 19318221 19318965 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000340170.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3532 chr22 HAVANA transcript 19318221 19419256 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3533 chr22 HAVANA exon 19418963 19419256 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 1; exon_id "ENSE00001933986.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3534 chr22 HAVANA CDS 19418963 19418999 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 1; exon_id "ENSE00001933986.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3535 chr22 HAVANA start_codon 19418997 19418999 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 1; exon_id "ENSE00001933986.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3536 chr22 HAVANA exon 19398239 19398301 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 2; exon_id "ENSE00003580891.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3537 chr22 HAVANA CDS 19398239 19398301 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 2; exon_id "ENSE00003580891.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3538 chr22 HAVANA exon 19396006 19396116 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 3; exon_id "ENSE00003575047.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3539 chr22 HAVANA CDS 19396006 19396116 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 3; exon_id "ENSE00003575047.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3540 chr22 HAVANA exon 19394707 19394797 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 4; exon_id "ENSE00003694241.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3541 chr22 HAVANA CDS 19394707 19394797 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 4; exon_id "ENSE00003694241.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3542 chr22 HAVANA exon 19393309 19393403 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 5; exon_id "ENSE00003595190.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3543 chr22 HAVANA CDS 19393309 19393403 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 5; exon_id "ENSE00003595190.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3544 chr22 HAVANA exon 19385515 19385610 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 6; exon_id "ENSE00003478207.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3545 chr22 HAVANA CDS 19385515 19385610 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 6; exon_id "ENSE00003478207.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3546 chr22 HAVANA exon 19384310 19384470 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 7; exon_id "ENSE00003518651.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3547 chr22 HAVANA CDS 19384310 19384470 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 7; exon_id "ENSE00003518651.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3548 chr22 HAVANA exon 19381865 19382032 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 8; exon_id "ENSE00003569982.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3549 chr22 HAVANA CDS 19381865 19382032 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 8; exon_id "ENSE00003569982.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3550 chr22 HAVANA exon 19379624 19379737 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 9; exon_id "ENSE00003650304.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3551 chr22 HAVANA CDS 19379624 19379737 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 9; exon_id "ENSE00003650304.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3552 chr22 HAVANA exon 19376007 19376077 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 10; exon_id "ENSE00003467908.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3553 chr22 HAVANA CDS 19376007 19376077 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 10; exon_id "ENSE00003467908.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3554 chr22 HAVANA exon 19375234 19375339 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 11; exon_id "ENSE00003484139.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3555 chr22 HAVANA CDS 19375234 19375339 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 11; exon_id "ENSE00003484139.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3556 chr22 HAVANA exon 19373044 19373259 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 12; exon_id "ENSE00003683638.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3557 chr22 HAVANA CDS 19373044 19373259 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 12; exon_id "ENSE00003683638.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3558 chr22 HAVANA exon 19371143 19371228 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 13; exon_id "ENSE00003470497.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3559 chr22 HAVANA CDS 19371143 19371228 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 13; exon_id "ENSE00003470497.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3560 chr22 HAVANA exon 19365392 19365589 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 14; exon_id "ENSE00003535922.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3561 chr22 HAVANA CDS 19365392 19365589 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 14; exon_id "ENSE00003535922.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3562 chr22 HAVANA exon 19363154 19363315 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 15; exon_id "ENSE00003567968.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3563 chr22 HAVANA CDS 19363154 19363315 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 15; exon_id "ENSE00003567968.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3564 chr22 HAVANA exon 19349250 19349454 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 16; exon_id "ENSE00003475462.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3565 chr22 HAVANA CDS 19349250 19349454 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 16; exon_id "ENSE00003475462.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3566 chr22 HAVANA exon 19348760 19348864 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 17; exon_id "ENSE00003527896.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3567 chr22 HAVANA CDS 19348760 19348864 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 17; exon_id "ENSE00003527896.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3568 chr22 HAVANA exon 19346859 19347007 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 18; exon_id "ENSE00003489456.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3569 chr22 HAVANA CDS 19346859 19347007 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 18; exon_id "ENSE00003489456.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3570 chr22 HAVANA exon 19344413 19344574 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 19; exon_id "ENSE00003555550.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3571 chr22 HAVANA CDS 19344413 19344574 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 19; exon_id "ENSE00003555550.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3572 chr22 HAVANA exon 19343753 19343811 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 20; exon_id "ENSE00003676847.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3573 chr22 HAVANA CDS 19343753 19343811 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 20; exon_id "ENSE00003676847.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3574 chr22 HAVANA exon 19343283 19343388 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 21; exon_id "ENSE00000650725.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3575 chr22 HAVANA CDS 19343283 19343388 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 21; exon_id "ENSE00000650725.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3576 chr22 HAVANA exon 19341519 19341641 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 22; exon_id "ENSE00003693401.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3577 chr22 HAVANA CDS 19341519 19341641 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 22; exon_id "ENSE00003693401.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3578 chr22 HAVANA exon 19340879 19341042 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 23; exon_id "ENSE00003580182.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3579 chr22 HAVANA CDS 19340879 19341042 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 23; exon_id "ENSE00003580182.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3580 chr22 HAVANA exon 19338881 19338969 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 24; exon_id "ENSE00000650719.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3581 chr22 HAVANA CDS 19338881 19338969 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 24; exon_id "ENSE00000650719.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3582 chr22 HAVANA exon 19318221 19319079 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 25; exon_id "ENSE00001229731.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3583 chr22 HAVANA CDS 19318966 19319079 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 25; exon_id "ENSE00001229731.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3584 chr22 HAVANA stop_codon 19318963 19318965 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; exon_number 25; exon_id "ENSE00001229731.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3585 chr22 HAVANA UTR 19419000 19419256 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3586 chr22 HAVANA UTR 19318221 19318965 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000263208.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13759.1"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3587 chr22 ENSEMBL transcript 19318581 19435224 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3588 chr22 ENSEMBL exon 19435188 19435224 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 1; exon_id "ENSE00001559416.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3589 chr22 ENSEMBL exon 19398239 19398301 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 2; exon_id "ENSE00003681630.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3590 chr22 ENSEMBL exon 19396006 19396116 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 3; exon_id "ENSE00003482431.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3591 chr22 ENSEMBL CDS 19396006 19396084 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 3; exon_id "ENSE00003482431.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3592 chr22 ENSEMBL start_codon 19396082 19396084 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 3; exon_id "ENSE00003482431.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3593 chr22 ENSEMBL exon 19394707 19394797 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 4; exon_id "ENSE00003694241.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3594 chr22 ENSEMBL CDS 19394707 19394797 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 4; exon_id "ENSE00003694241.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3595 chr22 ENSEMBL exon 19393309 19393403 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 5; exon_id "ENSE00003595190.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3596 chr22 ENSEMBL CDS 19393309 19393403 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 5; exon_id "ENSE00003595190.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3597 chr22 ENSEMBL exon 19385515 19385610 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 6; exon_id "ENSE00003478207.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3598 chr22 ENSEMBL CDS 19385515 19385610 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 6; exon_id "ENSE00003478207.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3599 chr22 ENSEMBL exon 19384310 19384470 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 7; exon_id "ENSE00003518651.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3600 chr22 ENSEMBL CDS 19384310 19384470 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 7; exon_id "ENSE00003518651.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3601 chr22 ENSEMBL exon 19381865 19382032 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 8; exon_id "ENSE00003569982.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3602 chr22 ENSEMBL CDS 19381865 19382032 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 8; exon_id "ENSE00003569982.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3603 chr22 ENSEMBL exon 19379624 19379737 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 9; exon_id "ENSE00003650304.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3604 chr22 ENSEMBL CDS 19379624 19379737 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 9; exon_id "ENSE00003650304.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3605 chr22 ENSEMBL exon 19376007 19376077 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 10; exon_id "ENSE00003467908.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3606 chr22 ENSEMBL CDS 19376007 19376077 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 10; exon_id "ENSE00003467908.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3607 chr22 ENSEMBL exon 19375234 19375339 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 11; exon_id "ENSE00003484139.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3608 chr22 ENSEMBL CDS 19375234 19375339 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 11; exon_id "ENSE00003484139.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3609 chr22 ENSEMBL exon 19373044 19373259 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 12; exon_id "ENSE00003683638.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3610 chr22 ENSEMBL CDS 19373044 19373259 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 12; exon_id "ENSE00003683638.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3611 chr22 ENSEMBL exon 19371143 19371228 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 13; exon_id "ENSE00003470497.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3612 chr22 ENSEMBL CDS 19371143 19371228 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 13; exon_id "ENSE00003470497.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3613 chr22 ENSEMBL exon 19365392 19365589 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 14; exon_id "ENSE00003535922.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3614 chr22 ENSEMBL CDS 19365392 19365589 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 14; exon_id "ENSE00003535922.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3615 chr22 ENSEMBL exon 19363154 19363315 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 15; exon_id "ENSE00003567968.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3616 chr22 ENSEMBL CDS 19363154 19363315 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 15; exon_id "ENSE00003567968.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3617 chr22 ENSEMBL exon 19349250 19349454 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 16; exon_id "ENSE00003475462.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3618 chr22 ENSEMBL CDS 19349250 19349454 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 16; exon_id "ENSE00003475462.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3619 chr22 ENSEMBL exon 19348760 19348864 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 17; exon_id "ENSE00003527896.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3620 chr22 ENSEMBL CDS 19348760 19348864 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 17; exon_id "ENSE00003527896.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3621 chr22 ENSEMBL exon 19346859 19347007 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 18; exon_id "ENSE00003489456.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3622 chr22 ENSEMBL CDS 19346859 19347007 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 18; exon_id "ENSE00003489456.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3623 chr22 ENSEMBL exon 19344413 19344574 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 19; exon_id "ENSE00003555550.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3624 chr22 ENSEMBL CDS 19344413 19344574 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 19; exon_id "ENSE00003555550.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3625 chr22 ENSEMBL exon 19343753 19343811 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 20; exon_id "ENSE00003676847.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3626 chr22 ENSEMBL CDS 19343753 19343811 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 20; exon_id "ENSE00003676847.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3627 chr22 ENSEMBL exon 19343283 19343388 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 21; exon_id "ENSE00000650725.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3628 chr22 ENSEMBL CDS 19343283 19343388 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 21; exon_id "ENSE00000650725.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3629 chr22 ENSEMBL exon 19341519 19341641 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 22; exon_id "ENSE00003693401.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3630 chr22 ENSEMBL CDS 19341519 19341641 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 22; exon_id "ENSE00003693401.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3631 chr22 ENSEMBL exon 19340879 19341042 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 23; exon_id "ENSE00003580182.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3632 chr22 ENSEMBL CDS 19340879 19341042 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 23; exon_id "ENSE00003580182.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3633 chr22 ENSEMBL exon 19338881 19338969 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 24; exon_id "ENSE00000650719.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3634 chr22 ENSEMBL CDS 19338881 19338969 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 24; exon_id "ENSE00000650719.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3635 chr22 ENSEMBL exon 19318581 19319079 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 25; exon_id "ENSE00002205787.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3636 chr22 ENSEMBL CDS 19318966 19319079 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 25; exon_id "ENSE00002205787.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3637 chr22 ENSEMBL stop_codon 19318963 19318965 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; exon_number 25; exon_id "ENSE00002205787.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3638 chr22 ENSEMBL UTR 19435188 19435224 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3639 chr22 ENSEMBL UTR 19398239 19398301 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3640 chr22 ENSEMBL UTR 19396085 19396116 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3641 chr22 ENSEMBL UTR 19318581 19318965 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000541063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3642 chr22 ENSEMBL transcript 19338891 19435214 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3643 chr22 ENSEMBL exon 19435188 19435214 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 1; exon_id "ENSE00003594064.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3644 chr22 ENSEMBL exon 19434901 19435068 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 2; exon_id "ENSE00003660573.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3645 chr22 ENSEMBL exon 19398239 19398301 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 3; exon_id "ENSE00003681630.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3646 chr22 ENSEMBL exon 19396006 19396116 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 4; exon_id "ENSE00003482431.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3647 chr22 ENSEMBL CDS 19396006 19396084 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 4; exon_id "ENSE00003482431.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3648 chr22 ENSEMBL start_codon 19396082 19396084 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 4; exon_id "ENSE00003482431.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3649 chr22 ENSEMBL exon 19394707 19394797 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 5; exon_id "ENSE00003694241.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3650 chr22 ENSEMBL CDS 19394707 19394797 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 5; exon_id "ENSE00003694241.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3651 chr22 ENSEMBL exon 19393309 19393403 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 6; exon_id "ENSE00003595190.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3652 chr22 ENSEMBL CDS 19393309 19393403 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 6; exon_id "ENSE00003595190.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3653 chr22 ENSEMBL exon 19385515 19385610 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 7; exon_id "ENSE00003478207.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3654 chr22 ENSEMBL CDS 19385515 19385610 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 7; exon_id "ENSE00003478207.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3655 chr22 ENSEMBL exon 19384310 19384470 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 8; exon_id "ENSE00003518651.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3656 chr22 ENSEMBL CDS 19384310 19384470 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 8; exon_id "ENSE00003518651.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3657 chr22 ENSEMBL exon 19381865 19382032 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 9; exon_id "ENSE00003569982.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3658 chr22 ENSEMBL CDS 19381865 19382032 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 9; exon_id "ENSE00003569982.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3659 chr22 ENSEMBL exon 19379624 19379737 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 10; exon_id "ENSE00003650304.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3660 chr22 ENSEMBL CDS 19379624 19379737 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 10; exon_id "ENSE00003650304.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3661 chr22 ENSEMBL exon 19376007 19376077 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 11; exon_id "ENSE00003467908.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3662 chr22 ENSEMBL CDS 19376007 19376077 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 11; exon_id "ENSE00003467908.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3663 chr22 ENSEMBL exon 19375234 19375339 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 12; exon_id "ENSE00003484139.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3664 chr22 ENSEMBL CDS 19375234 19375339 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 12; exon_id "ENSE00003484139.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3665 chr22 ENSEMBL exon 19373044 19373259 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 13; exon_id "ENSE00003683638.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3666 chr22 ENSEMBL CDS 19373044 19373259 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 13; exon_id "ENSE00003683638.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3667 chr22 ENSEMBL exon 19371143 19371228 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 14; exon_id "ENSE00003470497.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3668 chr22 ENSEMBL CDS 19371143 19371228 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 14; exon_id "ENSE00003470497.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3669 chr22 ENSEMBL exon 19365392 19365589 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 15; exon_id "ENSE00003535922.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3670 chr22 ENSEMBL CDS 19365392 19365589 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 15; exon_id "ENSE00003535922.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3671 chr22 ENSEMBL exon 19363154 19363315 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 16; exon_id "ENSE00003567968.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3672 chr22 ENSEMBL CDS 19363154 19363315 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 16; exon_id "ENSE00003567968.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3673 chr22 ENSEMBL exon 19349250 19349454 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 17; exon_id "ENSE00003475462.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3674 chr22 ENSEMBL CDS 19349250 19349454 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 17; exon_id "ENSE00003475462.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3675 chr22 ENSEMBL exon 19348760 19348864 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 18; exon_id "ENSE00003527896.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3676 chr22 ENSEMBL CDS 19348760 19348864 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 18; exon_id "ENSE00003527896.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3677 chr22 ENSEMBL exon 19346859 19347007 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 19; exon_id "ENSE00003489456.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3678 chr22 ENSEMBL CDS 19346859 19347007 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 19; exon_id "ENSE00003489456.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3679 chr22 ENSEMBL exon 19344413 19344574 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 20; exon_id "ENSE00003555550.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3680 chr22 ENSEMBL CDS 19344413 19344574 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 20; exon_id "ENSE00003555550.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3681 chr22 ENSEMBL exon 19343753 19343811 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 21; exon_id "ENSE00003676847.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3682 chr22 ENSEMBL CDS 19343753 19343811 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 21; exon_id "ENSE00003676847.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3683 chr22 ENSEMBL exon 19341519 19341641 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 22; exon_id "ENSE00003533665.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3684 chr22 ENSEMBL CDS 19341547 19341641 . - 2 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 22; exon_id "ENSE00003533665.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3685 chr22 ENSEMBL stop_codon 19341544 19341546 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 22; exon_id "ENSE00003533665.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3686 chr22 ENSEMBL exon 19340879 19341042 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 23; exon_id "ENSE00003581809.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3687 chr22 ENSEMBL exon 19338891 19338969 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; exon_number 24; exon_id "ENSE00003620062.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3688 chr22 ENSEMBL UTR 19435188 19435214 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3689 chr22 ENSEMBL UTR 19434901 19435068 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3690 chr22 ENSEMBL UTR 19398239 19398301 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3691 chr22 ENSEMBL UTR 19396085 19396116 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3692 chr22 ENSEMBL UTR 19341519 19341546 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3693 chr22 ENSEMBL UTR 19340879 19341042 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3694 chr22 ENSEMBL UTR 19338891 19338969 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000546308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIRA-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150134.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3695 chr22 HAVANA transcript 19385584 19417786 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000464189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "HIRA-003"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316499.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3696 chr22 HAVANA exon 19417614 19417786 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000464189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "HIRA-003"; exon_number 1; exon_id "ENSE00001890135.1"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316499.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3697 chr22 HAVANA exon 19398239 19398301 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000464189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "HIRA-003"; exon_number 2; exon_id "ENSE00003681630.1"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316499.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3698 chr22 HAVANA exon 19396006 19396116 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000464189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "HIRA-003"; exon_number 3; exon_id "ENSE00003545941.1"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316499.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3699 chr22 HAVANA exon 19394707 19394797 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000464189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "HIRA-003"; exon_number 4; exon_id "ENSE00003469100.1"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316499.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3700 chr22 HAVANA exon 19393309 19393403 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000464189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "HIRA-003"; exon_number 5; exon_id "ENSE00003479053.1"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316499.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3701 chr22 HAVANA exon 19385584 19385610 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000464189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "HIRA-003"; exon_number 6; exon_id "ENSE00001934328.1"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000316499.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3702 chr22 HAVANA transcript 19385591 19434973 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3703 chr22 HAVANA exon 19434901 19434973 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; exon_number 1; exon_id "ENSE00001790166.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3704 chr22 HAVANA CDS 19434901 19434973 . - 1 gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; exon_number 1; exon_id "ENSE00001790166.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3705 chr22 HAVANA exon 19398239 19398301 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; exon_number 2; exon_id "ENSE00003465150.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3706 chr22 HAVANA CDS 19398239 19398301 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; exon_number 2; exon_id "ENSE00003465150.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3707 chr22 HAVANA exon 19396006 19396116 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; exon_number 3; exon_id "ENSE00003499837.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3708 chr22 HAVANA CDS 19396096 19396116 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; exon_number 3; exon_id "ENSE00003499837.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3709 chr22 HAVANA stop_codon 19396093 19396095 . - 0 gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; exon_number 3; exon_id "ENSE00003499837.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3710 chr22 HAVANA exon 19394707 19394797 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; exon_number 4; exon_id "ENSE00003469100.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3711 chr22 HAVANA exon 19393309 19393403 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; exon_number 5; exon_id "ENSE00003479053.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3712 chr22 HAVANA exon 19385591 19385610 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; exon_number 6; exon_id "ENSE00001624837.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3713 chr22 HAVANA UTR 19396006 19396095 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3714 chr22 HAVANA UTR 19394707 19394797 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3715 chr22 HAVANA UTR 19393309 19393403 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3716 chr22 HAVANA UTR 19385591 19385610 . - . gene_id "ENSG00000100084.10"; transcript_id "ENST00000452818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIRA"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HIRA-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150134.4"; havana_transcript "OTTHUMT00000334594.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3717 chr22 HAVANA gene 19338891 19435755 . - . gene_id "ENSG00000242259.4"; transcript_id "ENSG00000242259.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39"; level 2; havana_gene "OTTHUMG00000150137.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3718 chr22 HAVANA transcript 19338891 19435214 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3719 chr22 HAVANA exon 19435188 19435214 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 1; exon_id "ENSE00003589296.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3720 chr22 HAVANA CDS 19435188 19435211 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 1; exon_id "ENSE00003589296.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3721 chr22 HAVANA start_codon 19435209 19435211 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 1; exon_id "ENSE00003589296.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3722 chr22 HAVANA exon 19434901 19435068 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 2; exon_id "ENSE00003531772.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3723 chr22 HAVANA CDS 19434901 19435068 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 2; exon_id "ENSE00003531772.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3724 chr22 HAVANA exon 19398239 19398301 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 3; exon_id "ENSE00003601014.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3725 chr22 HAVANA CDS 19398239 19398301 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 3; exon_id "ENSE00003601014.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3726 chr22 HAVANA exon 19396006 19396116 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 4; exon_id "ENSE00003686070.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3727 chr22 HAVANA CDS 19396096 19396116 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 4; exon_id "ENSE00003686070.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3728 chr22 HAVANA stop_codon 19396093 19396095 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 4; exon_id "ENSE00003686070.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3729 chr22 HAVANA exon 19394707 19394797 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 5; exon_id "ENSE00003526080.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3730 chr22 HAVANA exon 19393309 19393403 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 6; exon_id "ENSE00003676878.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3731 chr22 HAVANA exon 19385515 19385610 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 7; exon_id "ENSE00003580237.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3732 chr22 HAVANA exon 19384310 19384470 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 8; exon_id "ENSE00003516974.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3733 chr22 HAVANA exon 19381865 19382032 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 9; exon_id "ENSE00003537431.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3734 chr22 HAVANA exon 19379624 19379737 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 10; exon_id "ENSE00003555265.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3735 chr22 HAVANA exon 19376007 19376077 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 11; exon_id "ENSE00003564253.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3736 chr22 HAVANA exon 19375234 19375339 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 12; exon_id "ENSE00003510131.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3737 chr22 HAVANA exon 19373044 19373259 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 13; exon_id "ENSE00003660288.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3738 chr22 HAVANA exon 19371143 19371228 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 14; exon_id "ENSE00003678000.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3739 chr22 HAVANA exon 19365392 19365589 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 15; exon_id "ENSE00003554034.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3740 chr22 HAVANA exon 19363154 19363315 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 16; exon_id "ENSE00003628612.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3741 chr22 HAVANA exon 19349250 19349454 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 17; exon_id "ENSE00003501707.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3742 chr22 HAVANA exon 19348760 19348864 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 18; exon_id "ENSE00003586770.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3743 chr22 HAVANA exon 19346859 19347007 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 19; exon_id "ENSE00003682372.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3744 chr22 HAVANA exon 19344413 19344574 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 20; exon_id "ENSE00003531732.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3745 chr22 HAVANA exon 19343753 19343811 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 21; exon_id "ENSE00003531533.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3746 chr22 HAVANA exon 19341519 19341641 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 22; exon_id "ENSE00003531978.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3747 chr22 HAVANA exon 19340879 19341042 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 23; exon_id "ENSE00003484596.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3748 chr22 HAVANA exon 19338891 19338969 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; exon_number 24; exon_id "ENSE00003675065.1"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3749 chr22 HAVANA UTR 19435212 19435214 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3750 chr22 HAVANA UTR 19396006 19396095 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3751 chr22 HAVANA UTR 19394707 19394797 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3752 chr22 HAVANA UTR 19393309 19393403 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3753 chr22 HAVANA UTR 19385515 19385610 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3754 chr22 HAVANA UTR 19384310 19384470 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3755 chr22 HAVANA UTR 19381865 19382032 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3756 chr22 HAVANA UTR 19379624 19379737 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3757 chr22 HAVANA UTR 19376007 19376077 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3758 chr22 HAVANA UTR 19375234 19375339 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3759 chr22 HAVANA UTR 19373044 19373259 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3760 chr22 HAVANA UTR 19371143 19371228 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3761 chr22 HAVANA UTR 19365392 19365589 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3762 chr22 HAVANA UTR 19363154 19363315 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3763 chr22 HAVANA UTR 19349250 19349454 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3764 chr22 HAVANA UTR 19348760 19348864 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3765 chr22 HAVANA UTR 19346859 19347007 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3766 chr22 HAVANA UTR 19344413 19344574 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3767 chr22 HAVANA UTR 19343753 19343811 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3768 chr22 HAVANA UTR 19341519 19341641 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3769 chr22 HAVANA UTR 19340879 19341042 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3770 chr22 HAVANA UTR 19338891 19338969 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000509549.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C22orf39-003"; level 2; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000367691.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3771 chr22 HAVANA transcript 19428409 19435215 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000399568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf39-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316495.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3772 chr22 HAVANA exon 19435188 19435215 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000399568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf39-002"; exon_number 1; exon_id "ENSE00001311554.4"; level 2; tag "basic"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316495.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3773 chr22 HAVANA CDS 19435188 19435211 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000399568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf39-002"; exon_number 1; exon_id "ENSE00001311554.4"; level 2; tag "basic"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316495.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3774 chr22 HAVANA start_codon 19435209 19435211 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000399568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf39-002"; exon_number 1; exon_id "ENSE00001311554.4"; level 2; tag "basic"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316495.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3775 chr22 HAVANA exon 19434901 19435068 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000399568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf39-002"; exon_number 2; exon_id "ENSE00003531772.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316495.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3776 chr22 HAVANA CDS 19434901 19435068 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000399568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf39-002"; exon_number 2; exon_id "ENSE00003531772.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316495.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3777 chr22 HAVANA exon 19428409 19429217 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000399568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf39-002"; exon_number 3; exon_id "ENSE00001539108.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316495.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3778 chr22 HAVANA CDS 19429170 19429217 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000399568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf39-002"; exon_number 3; exon_id "ENSE00001539108.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316495.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3779 chr22 HAVANA stop_codon 19429167 19429169 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000399568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf39-002"; exon_number 3; exon_id "ENSE00001539108.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316495.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3780 chr22 HAVANA UTR 19435212 19435215 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000399568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf39-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316495.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3781 chr22 HAVANA UTR 19428409 19429169 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000399568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf39-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316495.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3782 chr22 ENSEMBL transcript 19428431 19435755 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000542103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54498.1"; havana_gene "OTTHUMG00000150137.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3783 chr22 ENSEMBL exon 19435188 19435755 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000542103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-201"; exon_number 1; exon_id "ENSE00001539094.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54498.1"; havana_gene "OTTHUMG00000150137.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3784 chr22 ENSEMBL CDS 19435188 19435322 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000542103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-201"; exon_number 1; exon_id "ENSE00001539094.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54498.1"; havana_gene "OTTHUMG00000150137.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3785 chr22 ENSEMBL start_codon 19435320 19435322 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000542103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-201"; exon_number 1; exon_id "ENSE00001539094.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54498.1"; havana_gene "OTTHUMG00000150137.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3786 chr22 ENSEMBL exon 19434901 19435068 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000542103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-201"; exon_number 2; exon_id "ENSE00003531772.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54498.1"; havana_gene "OTTHUMG00000150137.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3787 chr22 ENSEMBL CDS 19434901 19435068 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000542103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-201"; exon_number 2; exon_id "ENSE00003531772.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54498.1"; havana_gene "OTTHUMG00000150137.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3788 chr22 ENSEMBL exon 19428431 19429217 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000542103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-201"; exon_number 3; exon_id "ENSE00002315236.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54498.1"; havana_gene "OTTHUMG00000150137.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3789 chr22 ENSEMBL CDS 19429170 19429217 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000542103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-201"; exon_number 3; exon_id "ENSE00002315236.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54498.1"; havana_gene "OTTHUMG00000150137.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3790 chr22 ENSEMBL stop_codon 19429167 19429169 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000542103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-201"; exon_number 3; exon_id "ENSE00002315236.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54498.1"; havana_gene "OTTHUMG00000150137.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3791 chr22 ENSEMBL UTR 19435323 19435755 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000542103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54498.1"; havana_gene "OTTHUMG00000150137.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3792 chr22 ENSEMBL UTR 19428431 19429169 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000542103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54498.1"; havana_gene "OTTHUMG00000150137.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3793 chr22 HAVANA transcript 19429300 19435755 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000399562.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-001"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33599.2"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316494.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3794 chr22 HAVANA exon 19435188 19435755 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000399562.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-001"; exon_number 1; exon_id "ENSE00001539094.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33599.2"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316494.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3795 chr22 HAVANA CDS 19435188 19435322 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000399562.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-001"; exon_number 1; exon_id "ENSE00001539094.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33599.2"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316494.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3796 chr22 HAVANA start_codon 19435320 19435322 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000399562.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-001"; exon_number 1; exon_id "ENSE00001539094.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33599.2"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316494.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3797 chr22 HAVANA exon 19434901 19435068 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000399562.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-001"; exon_number 2; exon_id "ENSE00003531772.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33599.2"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316494.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3798 chr22 HAVANA CDS 19434901 19435068 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000399562.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-001"; exon_number 2; exon_id "ENSE00003531772.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33599.2"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316494.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3799 chr22 HAVANA exon 19429300 19431913 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000399562.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-001"; exon_number 3; exon_id "ENSE00001494520.5"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33599.2"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316494.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3800 chr22 HAVANA CDS 19431791 19431913 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000399562.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-001"; exon_number 3; exon_id "ENSE00001494520.5"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33599.2"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316494.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3801 chr22 HAVANA stop_codon 19431788 19431790 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000399562.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-001"; exon_number 3; exon_id "ENSE00001494520.5"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33599.2"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316494.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3802 chr22 HAVANA UTR 19435323 19435755 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000399562.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-001"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33599.2"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316494.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3803 chr22 HAVANA UTR 19429300 19431790 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000399562.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf39-001"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33599.2"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000316494.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3804 chr22 HAVANA transcript 19430894 19435220 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000333059.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf39-004"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000472517.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3805 chr22 HAVANA exon 19435188 19435220 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000333059.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf39-004"; exon_number 1; exon_id "ENSE00003708298.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000472517.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3806 chr22 HAVANA CDS 19435188 19435211 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000333059.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf39-004"; exon_number 1; exon_id "ENSE00003708298.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000472517.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3807 chr22 HAVANA start_codon 19435209 19435211 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000333059.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf39-004"; exon_number 1; exon_id "ENSE00003708298.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000472517.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3808 chr22 HAVANA exon 19434901 19435068 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000333059.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf39-004"; exon_number 2; exon_id "ENSE00003531772.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000472517.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3809 chr22 HAVANA CDS 19434901 19435068 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000333059.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf39-004"; exon_number 2; exon_id "ENSE00003531772.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000472517.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3810 chr22 HAVANA exon 19430894 19431913 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000333059.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf39-004"; exon_number 3; exon_id "ENSE00001539089.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000472517.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3811 chr22 HAVANA CDS 19431791 19431913 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000333059.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf39-004"; exon_number 3; exon_id "ENSE00001539089.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000472517.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3812 chr22 HAVANA stop_codon 19431788 19431790 . - 0 gene_id "ENSG00000242259.4"; transcript_id "ENST00000333059.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf39-004"; exon_number 3; exon_id "ENSE00001539089.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000472517.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3813 chr22 HAVANA UTR 19435212 19435220 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000333059.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf39-004"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000472517.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3814 chr22 HAVANA UTR 19430894 19431790 . - . gene_id "ENSG00000242259.4"; transcript_id "ENST00000333059.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf39"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf39-004"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150137.4"; havana_transcript "OTTHUMT00000472517.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3815 chr22 ENSEMBL gene 19353289 19353565 . + . gene_id "ENSG00000244296.2"; transcript_id "ENSG00000244296.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL168P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL168P"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3816 chr22 ENSEMBL transcript 19353289 19353565 . + . gene_id "ENSG00000244296.2"; transcript_id "ENST00000463821.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL168P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL168P-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3817 chr22 ENSEMBL exon 19353289 19353565 . + . gene_id "ENSG00000244296.2"; transcript_id "ENST00000463821.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL168P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL168P-201"; exon_number 1; exon_id "ENSE00001897608.2"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3818 chr22 HAVANA gene 19419425 19423598 . + . gene_id "ENSG00000185608.4"; transcript_id "ENSG00000185608.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL40"; level 2; havana_gene "OTTHUMG00000150136.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
3819 chr22 HAVANA transcript 19419425 19423598 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000333130.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL40-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13760.1"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316491.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3820 chr22 HAVANA exon 19419425 19420130 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000333130.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL40-001"; exon_number 1; exon_id "ENSE00001311893.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13760.1"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316491.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3821 chr22 HAVANA CDS 19420078 19420130 . + 0 gene_id "ENSG00000185608.4"; transcript_id "ENST00000333130.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL40-001"; exon_number 1; exon_id "ENSE00001311893.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13760.1"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316491.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3822 chr22 HAVANA start_codon 19420078 19420080 . + 0 gene_id "ENSG00000185608.4"; transcript_id "ENST00000333130.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL40-001"; exon_number 1; exon_id "ENSE00001311893.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13760.1"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316491.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3823 chr22 HAVANA exon 19420788 19420871 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000333130.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL40-001"; exon_number 2; exon_id "ENSE00003466682.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13760.1"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316491.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3824 chr22 HAVANA CDS 19420788 19420871 . + 1 gene_id "ENSG00000185608.4"; transcript_id "ENST00000333130.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL40-001"; exon_number 2; exon_id "ENSE00003466682.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13760.1"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316491.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3825 chr22 HAVANA exon 19422259 19422417 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000333130.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL40-001"; exon_number 3; exon_id "ENSE00003708122.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13760.1"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316491.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3826 chr22 HAVANA CDS 19422259 19422417 . + 1 gene_id "ENSG00000185608.4"; transcript_id "ENST00000333130.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL40-001"; exon_number 3; exon_id "ENSE00003708122.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13760.1"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316491.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3827 chr22 HAVANA exon 19423161 19423598 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000333130.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL40-001"; exon_number 4; exon_id "ENSE00001294358.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13760.1"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316491.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3828 chr22 HAVANA CDS 19423161 19423482 . + 1 gene_id "ENSG00000185608.4"; transcript_id "ENST00000333130.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL40-001"; exon_number 4; exon_id "ENSE00001294358.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13760.1"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316491.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3829 chr22 HAVANA stop_codon 19423483 19423485 . + 0 gene_id "ENSG00000185608.4"; transcript_id "ENST00000333130.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL40-001"; exon_number 4; exon_id "ENSE00001294358.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13760.1"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316491.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3830 chr22 HAVANA UTR 19419425 19420077 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000333130.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL40-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13760.1"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316491.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3831 chr22 HAVANA UTR 19423483 19423598 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000333130.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL40-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13760.1"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316491.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3832 chr22 HAVANA transcript 19420102 19423590 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000443660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MRPL40-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316492.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3833 chr22 HAVANA exon 19420102 19420382 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000443660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MRPL40-002"; exon_number 1; exon_id "ENSE00001772627.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316492.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3834 chr22 HAVANA exon 19420788 19420871 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000443660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MRPL40-002"; exon_number 2; exon_id "ENSE00003564679.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316492.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3835 chr22 HAVANA exon 19422259 19422417 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000443660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MRPL40-002"; exon_number 3; exon_id "ENSE00003707708.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316492.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3836 chr22 HAVANA exon 19423161 19423590 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000443660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MRPL40-002"; exon_number 4; exon_id "ENSE00001672298.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316492.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3837 chr22 HAVANA transcript 19420462 19423533 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000471259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MRPL40-003"; level 2; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316493.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3838 chr22 HAVANA exon 19420462 19420871 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000471259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MRPL40-003"; exon_number 1; exon_id "ENSE00001830727.1"; level 2; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316493.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3839 chr22 HAVANA exon 19422259 19422417 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000471259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MRPL40-003"; exon_number 2; exon_id "ENSE00003707708.1"; level 2; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316493.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3840 chr22 HAVANA exon 19423161 19423533 . + . gene_id "ENSG00000185608.4"; transcript_id "ENST00000471259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL40"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MRPL40-003"; exon_number 3; exon_id "ENSE00001943955.1"; level 2; havana_gene "OTTHUMG00000150136.3"; havana_transcript "OTTHUMT00000316493.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3841 chr22 HAVANA gene 19435416 19437628 . + . gene_id "ENSG00000185065.6"; transcript_id "ENSG00000185065.6"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC000068.5"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AC000068.5"; level 2; havana_gene "OTTHUMG00000150135.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3842 chr22 HAVANA transcript 19435416 19437628 . + . gene_id "ENSG00000185065.6"; transcript_id "ENST00000431090.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC000068.5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC000068.5-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150135.1"; havana_transcript "OTTHUMT00000316490.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3843 chr22 HAVANA exon 19435416 19435848 . + . gene_id "ENSG00000185065.6"; transcript_id "ENST00000431090.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC000068.5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC000068.5-001"; exon_number 1; exon_id "ENSE00001620364.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150135.1"; havana_transcript "OTTHUMT00000316490.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3844 chr22 HAVANA exon 19435965 19437628 . + . gene_id "ENSG00000185065.6"; transcript_id "ENST00000431090.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC000068.5"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC000068.5-001"; exon_number 2; exon_id "ENSE00001680363.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150135.1"; havana_transcript "OTTHUMT00000316490.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3845 chr22 HAVANA gene 19437433 19466738 . - . gene_id "ENSG00000070010.14"; transcript_id "ENSG00000070010.14"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L"; level 1; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3846 chr22 HAVANA transcript 19437433 19466738 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3847 chr22 HAVANA exon 19466606 19466738 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 1; exon_id "ENSE00001935556.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3848 chr22 HAVANA CDS 19466606 19466608 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 1; exon_id "ENSE00001935556.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3849 chr22 HAVANA start_codon 19466606 19466608 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 1; exon_id "ENSE00001935556.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3850 chr22 HAVANA exon 19462993 19463125 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 2; exon_id "ENSE00003597851.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3851 chr22 HAVANA CDS 19462993 19463125 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 2; exon_id "ENSE00003597851.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3852 chr22 HAVANA exon 19462591 19462623 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 3; exon_id "ENSE00003552070.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3853 chr22 HAVANA CDS 19462591 19462623 . - 2 gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 3; exon_id "ENSE00003552070.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3854 chr22 HAVANA exon 19459210 19459331 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 4; exon_id "ENSE00003631959.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3855 chr22 HAVANA CDS 19459210 19459331 . - 2 gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 4; exon_id "ENSE00003631959.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3856 chr22 HAVANA exon 19455396 19455526 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 5; exon_id "ENSE00003645722.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3857 chr22 HAVANA CDS 19455396 19455526 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 5; exon_id "ENSE00003645722.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3858 chr22 HAVANA exon 19452725 19452797 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 6; exon_id "ENSE00003553313.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3859 chr22 HAVANA CDS 19452725 19452797 . - 1 gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 6; exon_id "ENSE00003553313.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3860 chr22 HAVANA exon 19445594 19445662 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 7; exon_id "ENSE00003688668.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3861 chr22 HAVANA CDS 19445594 19445662 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 7; exon_id "ENSE00003688668.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3862 chr22 HAVANA exon 19444376 19444441 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 8; exon_id "ENSE00003593582.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3863 chr22 HAVANA CDS 19444376 19444441 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 8; exon_id "ENSE00003593582.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3864 chr22 HAVANA exon 19444110 19444157 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 9; exon_id "ENSE00003508606.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3865 chr22 HAVANA CDS 19444110 19444157 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 9; exon_id "ENSE00003508606.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3866 chr22 HAVANA exon 19443203 19443291 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 10; exon_id "ENSE00003472398.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3867 chr22 HAVANA CDS 19443203 19443291 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 10; exon_id "ENSE00003472398.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3868 chr22 HAVANA exon 19442272 19442353 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 11; exon_id "ENSE00000650767.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3869 chr22 HAVANA CDS 19442272 19442353 . - 1 gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 11; exon_id "ENSE00000650767.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3870 chr22 HAVANA exon 19437433 19438267 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 12; exon_id "ENSE00003705536.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3871 chr22 HAVANA CDS 19438196 19438267 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 12; exon_id "ENSE00003705536.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3872 chr22 HAVANA stop_codon 19438193 19438195 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; exon_number 12; exon_id "ENSE00003705536.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3873 chr22 HAVANA UTR 19466609 19466738 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3874 chr22 HAVANA UTR 19437433 19438195 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000263202.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13761.1"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316460.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3875 chr22 ENSEMBL transcript 19437464 19466738 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3876 chr22 ENSEMBL exon 19466606 19466738 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 1; exon_id "ENSE00001935556.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3877 chr22 ENSEMBL CDS 19466606 19466608 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 1; exon_id "ENSE00001935556.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3878 chr22 ENSEMBL start_codon 19466606 19466608 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 1; exon_id "ENSE00001935556.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3879 chr22 ENSEMBL exon 19462993 19463125 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 2; exon_id "ENSE00003597851.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3880 chr22 ENSEMBL CDS 19462993 19463125 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 2; exon_id "ENSE00003597851.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3881 chr22 ENSEMBL exon 19459210 19459331 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 3; exon_id "ENSE00003631959.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3882 chr22 ENSEMBL CDS 19459210 19459331 . - 2 gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 3; exon_id "ENSE00003631959.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3883 chr22 ENSEMBL exon 19455396 19455526 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 4; exon_id "ENSE00003645722.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3884 chr22 ENSEMBL CDS 19455396 19455526 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 4; exon_id "ENSE00003645722.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3885 chr22 ENSEMBL exon 19452725 19452797 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 5; exon_id "ENSE00003553313.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3886 chr22 ENSEMBL CDS 19452725 19452797 . - 1 gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 5; exon_id "ENSE00003553313.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3887 chr22 ENSEMBL exon 19445594 19445662 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 6; exon_id "ENSE00003688668.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3888 chr22 ENSEMBL CDS 19445594 19445662 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 6; exon_id "ENSE00003688668.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3889 chr22 ENSEMBL exon 19444376 19444441 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 7; exon_id "ENSE00003593582.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3890 chr22 ENSEMBL CDS 19444376 19444441 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 7; exon_id "ENSE00003593582.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3891 chr22 ENSEMBL exon 19444110 19444157 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 8; exon_id "ENSE00003508606.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3892 chr22 ENSEMBL CDS 19444110 19444157 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 8; exon_id "ENSE00003508606.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3893 chr22 ENSEMBL exon 19443203 19443291 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 9; exon_id "ENSE00003472398.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3894 chr22 ENSEMBL CDS 19443203 19443291 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 9; exon_id "ENSE00003472398.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3895 chr22 ENSEMBL exon 19442272 19442353 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 10; exon_id "ENSE00000650767.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3896 chr22 ENSEMBL CDS 19442272 19442353 . - 1 gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 10; exon_id "ENSE00000650767.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3897 chr22 ENSEMBL exon 19437464 19438267 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 11; exon_id "ENSE00001878967.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3898 chr22 ENSEMBL CDS 19438196 19438267 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 11; exon_id "ENSE00001878967.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3899 chr22 ENSEMBL stop_codon 19438193 19438195 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; exon_number 11; exon_id "ENSE00001878967.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3900 chr22 ENSEMBL UTR 19466609 19466738 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3901 chr22 ENSEMBL UTR 19437464 19438195 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000360834.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UFD1L-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150130.14";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3902 chr22 HAVANA transcript 19438144 19466695 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000459854.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-002"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316461.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3903 chr22 HAVANA exon 19466606 19466695 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000459854.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-002"; exon_number 1; exon_id "ENSE00003574551.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316461.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3904 chr22 HAVANA exon 19463019 19463125 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000459854.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-002"; exon_number 2; exon_id "ENSE00001819305.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316461.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3905 chr22 HAVANA exon 19462591 19462623 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000459854.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-002"; exon_number 3; exon_id "ENSE00003663518.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316461.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3906 chr22 HAVANA exon 19459210 19459331 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000459854.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-002"; exon_number 4; exon_id "ENSE00003525812.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316461.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3907 chr22 HAVANA exon 19455396 19455526 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000459854.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-002"; exon_number 5; exon_id "ENSE00003688357.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316461.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3908 chr22 HAVANA exon 19452725 19452797 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000459854.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-002"; exon_number 6; exon_id "ENSE00003620092.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316461.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3909 chr22 HAVANA exon 19445594 19445662 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000459854.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-002"; exon_number 7; exon_id "ENSE00003552501.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316461.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3910 chr22 HAVANA exon 19444376 19444441 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000459854.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-002"; exon_number 8; exon_id "ENSE00003523657.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316461.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3911 chr22 HAVANA exon 19444110 19444157 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000459854.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-002"; exon_number 9; exon_id "ENSE00003656624.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316461.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3912 chr22 HAVANA exon 19443203 19443291 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000459854.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-002"; exon_number 10; exon_id "ENSE00003635409.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316461.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3913 chr22 HAVANA exon 19438144 19442353 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000459854.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-002"; exon_number 11; exon_id "ENSE00001890214.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316461.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3914 chr22 HAVANA transcript 19438144 19466695 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3915 chr22 HAVANA exon 19466606 19466695 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 1; exon_id "ENSE00003509902.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3916 chr22 HAVANA CDS 19466606 19466608 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 1; exon_id "ENSE00003509902.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3917 chr22 HAVANA start_codon 19466606 19466608 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 1; exon_id "ENSE00003509902.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3918 chr22 HAVANA exon 19462993 19463125 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 2; exon_id "ENSE00003597851.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3919 chr22 HAVANA CDS 19462993 19463125 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 2; exon_id "ENSE00003597851.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3920 chr22 HAVANA exon 19462591 19462623 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 3; exon_id "ENSE00003552070.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3921 chr22 HAVANA CDS 19462591 19462623 . - 2 gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 3; exon_id "ENSE00003552070.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3922 chr22 HAVANA exon 19459210 19459331 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 4; exon_id "ENSE00003631959.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3923 chr22 HAVANA CDS 19459210 19459331 . - 2 gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 4; exon_id "ENSE00003631959.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3924 chr22 HAVANA exon 19455396 19455526 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 5; exon_id "ENSE00003645722.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3925 chr22 HAVANA CDS 19455396 19455526 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 5; exon_id "ENSE00003645722.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3926 chr22 HAVANA exon 19452725 19452797 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 6; exon_id "ENSE00003553313.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3927 chr22 HAVANA CDS 19452725 19452797 . - 1 gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 6; exon_id "ENSE00003553313.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3928 chr22 HAVANA exon 19445594 19445662 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 7; exon_id "ENSE00003688668.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3929 chr22 HAVANA CDS 19445594 19445662 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 7; exon_id "ENSE00003688668.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3930 chr22 HAVANA exon 19444376 19444441 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 8; exon_id "ENSE00003593582.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3931 chr22 HAVANA CDS 19444376 19444441 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 8; exon_id "ENSE00003593582.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3932 chr22 HAVANA exon 19444110 19444157 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 9; exon_id "ENSE00003508606.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3933 chr22 HAVANA CDS 19444110 19444157 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 9; exon_id "ENSE00003508606.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3934 chr22 HAVANA exon 19443203 19443291 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 10; exon_id "ENSE00003472398.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3935 chr22 HAVANA CDS 19443203 19443291 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 10; exon_id "ENSE00003472398.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3936 chr22 HAVANA exon 19442325 19442353 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 11; exon_id "ENSE00003585236.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3937 chr22 HAVANA CDS 19442325 19442353 . - 1 gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 11; exon_id "ENSE00003585236.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3938 chr22 HAVANA exon 19438144 19438267 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 12; exon_id "ENSE00001538852.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3939 chr22 HAVANA CDS 19438266 19438267 . - 2 gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 12; exon_id "ENSE00001538852.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3940 chr22 HAVANA stop_codon 19438263 19438265 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; exon_number 12; exon_id "ENSE00001538852.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3941 chr22 HAVANA UTR 19466609 19466695 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3942 chr22 HAVANA UTR 19438144 19438265 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000399523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33600.2"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316496.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3943 chr22 HAVANA transcript 19438148 19455239 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000466373.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-004"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316497.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3944 chr22 HAVANA exon 19452725 19455239 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000466373.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-004"; exon_number 1; exon_id "ENSE00001909434.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316497.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3945 chr22 HAVANA exon 19445594 19445662 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000466373.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-004"; exon_number 2; exon_id "ENSE00003552501.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316497.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3946 chr22 HAVANA exon 19444376 19444441 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000466373.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-004"; exon_number 3; exon_id "ENSE00003523657.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316497.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3947 chr22 HAVANA exon 19444110 19444157 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000466373.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-004"; exon_number 4; exon_id "ENSE00003656624.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316497.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3948 chr22 HAVANA exon 19443203 19443291 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000466373.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-004"; exon_number 5; exon_id "ENSE00003635409.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316497.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3949 chr22 HAVANA exon 19442325 19442353 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000466373.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-004"; exon_number 6; exon_id "ENSE00003663042.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316497.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3950 chr22 HAVANA exon 19439401 19439523 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000466373.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-004"; exon_number 7; exon_id "ENSE00001840137.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316497.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3951 chr22 HAVANA exon 19438148 19438267 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000466373.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-004"; exon_number 8; exon_id "ENSE00001903764.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316497.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3952 chr22 HAVANA transcript 19443203 19466725 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3953 chr22 HAVANA exon 19466606 19466725 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 1; exon_id "ENSE00001735884.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3954 chr22 HAVANA CDS 19466606 19466608 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 1; exon_id "ENSE00001735884.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3955 chr22 HAVANA start_codon 19466606 19466608 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 1; exon_id "ENSE00001735884.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3956 chr22 HAVANA exon 19455396 19455526 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 2; exon_id "ENSE00003645722.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3957 chr22 HAVANA CDS 19455396 19455526 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 2; exon_id "ENSE00003645722.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3958 chr22 HAVANA exon 19452725 19452797 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 3; exon_id "ENSE00003553313.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3959 chr22 HAVANA CDS 19452725 19452797 . - 1 gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 3; exon_id "ENSE00003553313.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3960 chr22 HAVANA exon 19445594 19445662 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 4; exon_id "ENSE00003688668.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3961 chr22 HAVANA CDS 19445594 19445662 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 4; exon_id "ENSE00003688668.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3962 chr22 HAVANA exon 19444376 19444441 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 5; exon_id "ENSE00003593582.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3963 chr22 HAVANA CDS 19444376 19444441 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 5; exon_id "ENSE00003593582.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3964 chr22 HAVANA exon 19444110 19444157 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 6; exon_id "ENSE00003508606.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3965 chr22 HAVANA CDS 19444110 19444157 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 6; exon_id "ENSE00003508606.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3966 chr22 HAVANA exon 19443203 19443291 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 7; exon_id "ENSE00003502564.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3967 chr22 HAVANA CDS 19443203 19443291 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; exon_number 7; exon_id "ENSE00003502564.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3968 chr22 HAVANA UTR 19466609 19466725 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000447868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-007"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340353.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3969 chr22 HAVANA transcript 19444403 19466708 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3970 chr22 HAVANA exon 19466606 19466708 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 1; exon_id "ENSE00001731278.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3971 chr22 HAVANA CDS 19466606 19466608 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 1; exon_id "ENSE00001731278.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3972 chr22 HAVANA start_codon 19466606 19466608 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 1; exon_id "ENSE00001731278.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3973 chr22 HAVANA exon 19462993 19463125 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 2; exon_id "ENSE00003597851.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3974 chr22 HAVANA CDS 19462993 19463125 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 2; exon_id "ENSE00003597851.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3975 chr22 HAVANA exon 19459210 19459331 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 3; exon_id "ENSE00003631959.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3976 chr22 HAVANA CDS 19459210 19459331 . - 2 gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 3; exon_id "ENSE00003631959.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3977 chr22 HAVANA exon 19455396 19455526 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 4; exon_id "ENSE00003645722.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3978 chr22 HAVANA CDS 19455396 19455526 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 4; exon_id "ENSE00003645722.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3979 chr22 HAVANA exon 19452725 19452797 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 5; exon_id "ENSE00003553313.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3980 chr22 HAVANA CDS 19452725 19452797 . - 1 gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 5; exon_id "ENSE00003553313.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3981 chr22 HAVANA exon 19445594 19445662 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 6; exon_id "ENSE00003688668.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3982 chr22 HAVANA CDS 19445594 19445662 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 6; exon_id "ENSE00003688668.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3983 chr22 HAVANA exon 19444403 19444441 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 7; exon_id "ENSE00001855170.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3984 chr22 HAVANA CDS 19444403 19444441 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; exon_number 7; exon_id "ENSE00001855170.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3985 chr22 HAVANA UTR 19466609 19466708 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000421968.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UFD1L-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000340352.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3986 chr22 HAVANA transcript 19452725 19466606 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000484101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "UFD1L-005"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316498.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3987 chr22 HAVANA exon 19466348 19466606 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000484101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "UFD1L-005"; exon_number 1; exon_id "ENSE00001809909.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316498.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3988 chr22 HAVANA exon 19462993 19463125 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000484101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "UFD1L-005"; exon_number 2; exon_id "ENSE00003551866.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316498.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3989 chr22 HAVANA exon 19462591 19462623 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000484101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "UFD1L-005"; exon_number 3; exon_id "ENSE00003663518.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316498.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3990 chr22 HAVANA exon 19459210 19459331 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000484101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "UFD1L-005"; exon_number 4; exon_id "ENSE00003525812.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316498.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3991 chr22 HAVANA exon 19455396 19455526 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000484101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "UFD1L-005"; exon_number 5; exon_id "ENSE00003688357.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316498.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3992 chr22 HAVANA exon 19452725 19452797 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000484101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "UFD1L-005"; exon_number 6; exon_id "ENSE00003620092.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000316498.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3993 chr22 HAVANA transcript 19454926 19466710 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000489406.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-010"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353479.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3994 chr22 HAVANA exon 19466606 19466710 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000489406.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-010"; exon_number 1; exon_id "ENSE00001834655.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353479.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3995 chr22 HAVANA exon 19462993 19463125 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000489406.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-010"; exon_number 2; exon_id "ENSE00003551866.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353479.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3996 chr22 HAVANA exon 19462591 19462623 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000489406.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-010"; exon_number 3; exon_id "ENSE00003663518.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353479.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3997 chr22 HAVANA exon 19459210 19459331 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000489406.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-010"; exon_number 4; exon_id "ENSE00003525812.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353479.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3998 chr22 HAVANA exon 19454926 19455526 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000489406.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UFD1L-010"; exon_number 5; exon_id "ENSE00001899390.1"; level 2; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353479.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
3999 chr22 HAVANA transcript 19455396 19466454 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000494054.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-009"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353478.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4000 chr22 HAVANA exon 19466286 19466454 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000494054.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-009"; exon_number 1; exon_id "ENSE00001820405.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353478.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4001 chr22 HAVANA exon 19462993 19463125 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000494054.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-009"; exon_number 2; exon_id "ENSE00003575904.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353478.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4002 chr22 HAVANA CDS 19462993 19463113 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000494054.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-009"; exon_number 2; exon_id "ENSE00003575904.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353478.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4003 chr22 HAVANA start_codon 19463111 19463113 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000494054.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-009"; exon_number 2; exon_id "ENSE00003575904.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353478.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4004 chr22 HAVANA exon 19462591 19462623 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000494054.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-009"; exon_number 3; exon_id "ENSE00003552070.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353478.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4005 chr22 HAVANA CDS 19462591 19462623 . - 2 gene_id "ENSG00000070010.14"; transcript_id "ENST00000494054.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-009"; exon_number 3; exon_id "ENSE00003552070.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353478.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4006 chr22 HAVANA exon 19459210 19459331 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000494054.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-009"; exon_number 4; exon_id "ENSE00003631959.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353478.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4007 chr22 HAVANA CDS 19459210 19459331 . - 2 gene_id "ENSG00000070010.14"; transcript_id "ENST00000494054.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-009"; exon_number 4; exon_id "ENSE00003631959.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353478.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4008 chr22 HAVANA exon 19455396 19455526 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000494054.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-009"; exon_number 5; exon_id "ENSE00003478754.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353478.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4009 chr22 HAVANA CDS 19455396 19455526 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000494054.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-009"; exon_number 5; exon_id "ENSE00003478754.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353478.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4010 chr22 HAVANA UTR 19466286 19466454 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000494054.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-009"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353478.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4011 chr22 HAVANA UTR 19463114 19463125 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000494054.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-009"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353478.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4012 chr22 HAVANA transcript 19455418 19466667 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000474226.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353477.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4013 chr22 HAVANA exon 19466606 19466667 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000474226.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-008"; exon_number 1; exon_id "ENSE00001845422.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353477.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4014 chr22 HAVANA exon 19459210 19459331 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000474226.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-008"; exon_number 2; exon_id "ENSE00003547314.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353477.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4015 chr22 HAVANA CDS 19459210 19459308 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000474226.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-008"; exon_number 2; exon_id "ENSE00003547314.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353477.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4016 chr22 HAVANA start_codon 19459306 19459308 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000474226.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-008"; exon_number 2; exon_id "ENSE00003547314.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353477.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4017 chr22 HAVANA exon 19455418 19455526 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000474226.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-008"; exon_number 3; exon_id "ENSE00001816104.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353477.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4018 chr22 HAVANA CDS 19455418 19455526 . - 0 gene_id "ENSG00000070010.14"; transcript_id "ENST00000474226.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-008"; exon_number 3; exon_id "ENSE00001816104.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353477.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4019 chr22 HAVANA UTR 19466606 19466667 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000474226.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353477.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4020 chr22 HAVANA UTR 19459309 19459331 . - . gene_id "ENSG00000070010.14"; transcript_id "ENST00000474226.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UFD1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UFD1L-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150130.14"; havana_transcript "OTTHUMT00000353477.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4021 chr22 HAVANA gene 19441702 19442128 . + . gene_id "ENSG00000273300.1"; transcript_id "ENSG00000273300.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC000068.9"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AC000068.9"; level 2; havana_gene "OTTHUMG00000186101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4022 chr22 HAVANA transcript 19441702 19442128 . + . gene_id "ENSG00000273300.1"; transcript_id "ENST00000607934.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC000068.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC000068.9-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186101.1"; havana_transcript "OTTHUMT00000472256.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4023 chr22 HAVANA exon 19441702 19442128 . + . gene_id "ENSG00000273300.1"; transcript_id "ENST00000607934.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC000068.9"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC000068.9-001"; exon_number 1; exon_id "ENSE00003703605.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186101.1"; havana_transcript "OTTHUMT00000472256.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4024 chr22 HAVANA gene 19444026 19444485 . + . gene_id "ENSG00000273212.1"; transcript_id "ENSG00000273212.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC000068.10"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AC000068.10"; level 2; havana_gene "OTTHUMG00000186102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4025 chr22 HAVANA transcript 19444026 19444485 . + . gene_id "ENSG00000273212.1"; transcript_id "ENST00000608816.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC000068.10"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC000068.10-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186102.1"; havana_transcript "OTTHUMT00000472257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4026 chr22 HAVANA exon 19444026 19444485 . + . gene_id "ENSG00000273212.1"; transcript_id "ENST00000608816.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC000068.10"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC000068.10-001"; exon_number 1; exon_id "ENSE00003708258.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186102.1"; havana_transcript "OTTHUMT00000472257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4027 chr22 HAVANA gene 19466982 19508135 . + . gene_id "ENSG00000093009.5"; transcript_id "ENSG00000093009.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45"; level 1; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4028 chr22 HAVANA transcript 19466982 19508135 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4029 chr22 HAVANA exon 19466982 19467094 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 1; exon_id "ENSE00001564620.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4030 chr22 HAVANA exon 19467349 19467542 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 2; exon_id "ENSE00001561371.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4031 chr22 HAVANA CDS 19467492 19467542 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 2; exon_id "ENSE00001561371.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4032 chr22 HAVANA start_codon 19467492 19467494 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 2; exon_id "ENSE00001561371.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4033 chr22 HAVANA exon 19467681 19467740 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 3; exon_id "ENSE00003484026.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4034 chr22 HAVANA CDS 19467681 19467740 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 3; exon_id "ENSE00003484026.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4035 chr22 HAVANA exon 19468476 19468568 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 4; exon_id "ENSE00003505829.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4036 chr22 HAVANA CDS 19468476 19468568 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 4; exon_id "ENSE00003505829.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4037 chr22 HAVANA exon 19470213 19470350 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 5; exon_id "ENSE00003603046.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4038 chr22 HAVANA CDS 19470213 19470350 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 5; exon_id "ENSE00003603046.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4039 chr22 HAVANA exon 19471385 19471528 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 6; exon_id "ENSE00003694637.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4040 chr22 HAVANA CDS 19471385 19471528 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 6; exon_id "ENSE00003694637.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4041 chr22 HAVANA exon 19481850 19481905 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 7; exon_id "ENSE00003479778.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4042 chr22 HAVANA CDS 19481850 19481905 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 7; exon_id "ENSE00003479778.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4043 chr22 HAVANA exon 19483504 19483552 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 8; exon_id "ENSE00003688309.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4044 chr22 HAVANA CDS 19483504 19483552 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 8; exon_id "ENSE00003688309.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4045 chr22 HAVANA exon 19484909 19484970 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 9; exon_id "ENSE00003600829.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4046 chr22 HAVANA CDS 19484909 19484970 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 9; exon_id "ENSE00003600829.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4047 chr22 HAVANA exon 19486624 19486674 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 10; exon_id "ENSE00003560950.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4048 chr22 HAVANA CDS 19486624 19486674 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 10; exon_id "ENSE00003560950.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4049 chr22 HAVANA exon 19492885 19493004 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 11; exon_id "ENSE00000331191.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4050 chr22 HAVANA CDS 19492885 19493004 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 11; exon_id "ENSE00000331191.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4051 chr22 HAVANA exon 19494909 19495040 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 12; exon_id "ENSE00003469360.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4052 chr22 HAVANA CDS 19494909 19495040 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 12; exon_id "ENSE00003469360.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4053 chr22 HAVANA exon 19495289 19495387 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 13; exon_id "ENSE00003614871.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4054 chr22 HAVANA CDS 19495289 19495387 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 13; exon_id "ENSE00003614871.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4055 chr22 HAVANA exon 19496053 19496214 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 14; exon_id "ENSE00003547547.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4056 chr22 HAVANA CDS 19496053 19496214 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 14; exon_id "ENSE00003547547.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4057 chr22 HAVANA exon 19502272 19502410 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 15; exon_id "ENSE00000650788.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4058 chr22 HAVANA CDS 19502272 19502410 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 15; exon_id "ENSE00000650788.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4059 chr22 HAVANA exon 19502488 19502571 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 16; exon_id "ENSE00000650789.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4060 chr22 HAVANA CDS 19502488 19502571 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 16; exon_id "ENSE00000650789.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4061 chr22 HAVANA exon 19504050 19504168 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 17; exon_id "ENSE00000650790.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4062 chr22 HAVANA CDS 19504050 19504168 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 17; exon_id "ENSE00000650790.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4063 chr22 HAVANA exon 19504340 19504416 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 18; exon_id "ENSE00003640334.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4064 chr22 HAVANA CDS 19504340 19504416 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 18; exon_id "ENSE00003640334.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4065 chr22 HAVANA exon 19506367 19506432 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 19; exon_id "ENSE00003583698.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4066 chr22 HAVANA CDS 19506367 19506428 . + 2 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 19; exon_id "ENSE00003583698.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4067 chr22 HAVANA stop_codon 19506429 19506431 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 19; exon_id "ENSE00003583698.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4068 chr22 HAVANA exon 19508004 19508135 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; exon_number 20; exon_id "ENSE00001557564.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4069 chr22 HAVANA UTR 19466982 19467094 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4070 chr22 HAVANA UTR 19467349 19467491 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4071 chr22 HAVANA UTR 19506429 19506432 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4072 chr22 HAVANA UTR 19508004 19508135 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000407835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4073 chr22 HAVANA transcript 19467005 19481876 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4074 chr22 HAVANA exon 19467005 19467094 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; exon_number 1; exon_id "ENSE00001792680.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4075 chr22 HAVANA CDS 19467080 19467094 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; exon_number 1; exon_id "ENSE00001792680.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4076 chr22 HAVANA start_codon 19467080 19467082 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; exon_number 1; exon_id "ENSE00001792680.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4077 chr22 HAVANA exon 19467681 19467740 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; exon_number 2; exon_id "ENSE00003484026.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4078 chr22 HAVANA CDS 19467681 19467740 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; exon_number 2; exon_id "ENSE00003484026.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4079 chr22 HAVANA exon 19468476 19468568 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; exon_number 3; exon_id "ENSE00003505829.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4080 chr22 HAVANA CDS 19468476 19468568 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; exon_number 3; exon_id "ENSE00003505829.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4081 chr22 HAVANA exon 19470213 19470350 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; exon_number 4; exon_id "ENSE00003603046.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4082 chr22 HAVANA CDS 19470213 19470350 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; exon_number 4; exon_id "ENSE00003603046.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4083 chr22 HAVANA exon 19471385 19471528 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; exon_number 5; exon_id "ENSE00003694637.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4084 chr22 HAVANA CDS 19471385 19471528 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; exon_number 5; exon_id "ENSE00003694637.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4085 chr22 HAVANA exon 19481850 19481876 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; exon_number 6; exon_id "ENSE00001638431.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4086 chr22 HAVANA CDS 19481850 19481876 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; exon_number 6; exon_id "ENSE00001638431.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4087 chr22 HAVANA UTR 19467005 19467079 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000438587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CDC45-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4088 chr22 HAVANA transcript 19467261 19470345 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000455750.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4089 chr22 HAVANA exon 19467261 19467542 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000455750.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-004"; exon_number 1; exon_id "ENSE00001646382.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4090 chr22 HAVANA CDS 19467492 19467542 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000455750.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-004"; exon_number 1; exon_id "ENSE00001646382.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4091 chr22 HAVANA start_codon 19467492 19467494 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000455750.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-004"; exon_number 1; exon_id "ENSE00001646382.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4092 chr22 HAVANA exon 19467681 19467740 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000455750.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-004"; exon_number 2; exon_id "ENSE00003484026.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4093 chr22 HAVANA CDS 19467681 19467740 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000455750.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-004"; exon_number 2; exon_id "ENSE00003484026.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4094 chr22 HAVANA exon 19468476 19468568 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000455750.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-004"; exon_number 3; exon_id "ENSE00003505829.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4095 chr22 HAVANA CDS 19468476 19468568 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000455750.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-004"; exon_number 3; exon_id "ENSE00003505829.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4096 chr22 HAVANA exon 19470213 19470345 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000455750.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-004"; exon_number 4; exon_id "ENSE00001612087.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4097 chr22 HAVANA CDS 19470213 19470345 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000455750.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-004"; exon_number 4; exon_id "ENSE00001612087.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4098 chr22 HAVANA UTR 19467261 19467491 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000455750.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4099 chr22 HAVANA transcript 19467261 19471396 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000491520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-005"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4100 chr22 HAVANA exon 19467261 19467740 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000491520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-005"; exon_number 1; exon_id "ENSE00001942356.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4101 chr22 HAVANA exon 19468476 19468568 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000491520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-005"; exon_number 2; exon_id "ENSE00003550141.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4102 chr22 HAVANA exon 19470213 19470350 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000491520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-005"; exon_number 3; exon_id "ENSE00003565997.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4103 chr22 HAVANA exon 19471385 19471396 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000491520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-005"; exon_number 4; exon_id "ENSE00001918755.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4104 chr22 ENSEMBL transcript 19467414 19508134 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4105 chr22 ENSEMBL exon 19467414 19467542 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 1; exon_id "ENSE00001724321.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4106 chr22 ENSEMBL CDS 19467492 19467542 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 1; exon_id "ENSE00001724321.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4107 chr22 ENSEMBL start_codon 19467492 19467494 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 1; exon_id "ENSE00001724321.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4108 chr22 ENSEMBL exon 19467681 19467740 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 2; exon_id "ENSE00003484026.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4109 chr22 ENSEMBL CDS 19467681 19467740 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 2; exon_id "ENSE00003484026.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4110 chr22 ENSEMBL exon 19468476 19468568 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 3; exon_id "ENSE00003505829.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4111 chr22 ENSEMBL CDS 19468476 19468568 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 3; exon_id "ENSE00003505829.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4112 chr22 ENSEMBL exon 19470213 19470350 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 4; exon_id "ENSE00003603046.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4113 chr22 ENSEMBL CDS 19470213 19470350 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 4; exon_id "ENSE00003603046.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4114 chr22 ENSEMBL exon 19471385 19471528 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 5; exon_id "ENSE00003694637.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4115 chr22 ENSEMBL CDS 19471385 19471528 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 5; exon_id "ENSE00003694637.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4116 chr22 ENSEMBL exon 19481850 19481905 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 6; exon_id "ENSE00003479778.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4117 chr22 ENSEMBL CDS 19481850 19481905 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 6; exon_id "ENSE00003479778.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4118 chr22 ENSEMBL exon 19482030 19482125 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 7; exon_id "ENSE00003496404.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4119 chr22 ENSEMBL CDS 19482030 19482125 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 7; exon_id "ENSE00003496404.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4120 chr22 ENSEMBL exon 19483504 19483552 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 8; exon_id "ENSE00003688309.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4121 chr22 ENSEMBL CDS 19483504 19483552 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 8; exon_id "ENSE00003688309.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4122 chr22 ENSEMBL exon 19484909 19484970 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 9; exon_id "ENSE00003600829.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4123 chr22 ENSEMBL CDS 19484909 19484970 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 9; exon_id "ENSE00003600829.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4124 chr22 ENSEMBL exon 19486624 19486674 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 10; exon_id "ENSE00003560950.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4125 chr22 ENSEMBL CDS 19486624 19486674 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 10; exon_id "ENSE00003560950.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4126 chr22 ENSEMBL exon 19492885 19493004 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 11; exon_id "ENSE00000331191.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4127 chr22 ENSEMBL CDS 19492885 19493004 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 11; exon_id "ENSE00000331191.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4128 chr22 ENSEMBL exon 19494909 19495040 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 12; exon_id "ENSE00003469360.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4129 chr22 ENSEMBL CDS 19494909 19495040 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 12; exon_id "ENSE00003469360.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4130 chr22 ENSEMBL exon 19495289 19495387 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 13; exon_id "ENSE00003614871.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4131 chr22 ENSEMBL CDS 19495289 19495387 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 13; exon_id "ENSE00003614871.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4132 chr22 ENSEMBL exon 19496053 19496214 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 14; exon_id "ENSE00003547547.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4133 chr22 ENSEMBL CDS 19496053 19496214 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 14; exon_id "ENSE00003547547.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4134 chr22 ENSEMBL exon 19502272 19502410 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 15; exon_id "ENSE00000650788.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4135 chr22 ENSEMBL CDS 19502272 19502410 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 15; exon_id "ENSE00000650788.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4136 chr22 ENSEMBL exon 19502488 19502571 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 16; exon_id "ENSE00000650789.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4137 chr22 ENSEMBL CDS 19502488 19502571 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 16; exon_id "ENSE00000650789.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4138 chr22 ENSEMBL exon 19504050 19504168 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 17; exon_id "ENSE00000650790.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4139 chr22 ENSEMBL CDS 19504050 19504168 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 17; exon_id "ENSE00000650790.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4140 chr22 ENSEMBL exon 19504340 19504416 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 18; exon_id "ENSE00003640334.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4141 chr22 ENSEMBL CDS 19504340 19504416 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 18; exon_id "ENSE00003640334.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4142 chr22 ENSEMBL exon 19506367 19506432 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 19; exon_id "ENSE00003583698.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4143 chr22 ENSEMBL CDS 19506367 19506428 . + 2 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 19; exon_id "ENSE00003583698.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4144 chr22 ENSEMBL stop_codon 19506429 19506431 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 19; exon_id "ENSE00003583698.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4145 chr22 ENSEMBL exon 19508004 19508134 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; exon_number 20; exon_id "ENSE00001326432.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4146 chr22 ENSEMBL UTR 19467414 19467491 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4147 chr22 ENSEMBL UTR 19506429 19506432 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4148 chr22 ENSEMBL UTR 19508004 19508134 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000437685.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54499.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4149 chr22 ENSEMBL transcript 19467416 19508134 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4150 chr22 ENSEMBL exon 19467416 19467542 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 1; exon_id "ENSE00001056446.2"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4151 chr22 ENSEMBL CDS 19467492 19467542 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 1; exon_id "ENSE00001056446.2"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4152 chr22 ENSEMBL start_codon 19467492 19467494 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 1; exon_id "ENSE00001056446.2"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4153 chr22 ENSEMBL exon 19467681 19467740 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 2; exon_id "ENSE00003484026.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4154 chr22 ENSEMBL CDS 19467681 19467740 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 2; exon_id "ENSE00003484026.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4155 chr22 ENSEMBL exon 19468476 19468568 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 3; exon_id "ENSE00003505829.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4156 chr22 ENSEMBL CDS 19468476 19468568 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 3; exon_id "ENSE00003505829.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4157 chr22 ENSEMBL exon 19470213 19470350 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 4; exon_id "ENSE00003603046.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4158 chr22 ENSEMBL CDS 19470213 19470350 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 4; exon_id "ENSE00003603046.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4159 chr22 ENSEMBL exon 19471385 19471528 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 5; exon_id "ENSE00003694637.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4160 chr22 ENSEMBL CDS 19471385 19471528 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 5; exon_id "ENSE00003694637.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4161 chr22 ENSEMBL exon 19481850 19481905 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 6; exon_id "ENSE00003479778.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4162 chr22 ENSEMBL CDS 19481850 19481905 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 6; exon_id "ENSE00003479778.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4163 chr22 ENSEMBL exon 19483504 19483552 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 7; exon_id "ENSE00003688309.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4164 chr22 ENSEMBL CDS 19483504 19483552 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 7; exon_id "ENSE00003688309.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4165 chr22 ENSEMBL exon 19484909 19484970 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 8; exon_id "ENSE00003600829.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4166 chr22 ENSEMBL CDS 19484909 19484970 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 8; exon_id "ENSE00003600829.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4167 chr22 ENSEMBL exon 19486624 19486674 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 9; exon_id "ENSE00003560950.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4168 chr22 ENSEMBL CDS 19486624 19486674 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 9; exon_id "ENSE00003560950.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4169 chr22 ENSEMBL exon 19492885 19493004 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 10; exon_id "ENSE00000331191.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4170 chr22 ENSEMBL CDS 19492885 19493004 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 10; exon_id "ENSE00000331191.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4171 chr22 ENSEMBL exon 19494909 19495040 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 11; exon_id "ENSE00003469360.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4172 chr22 ENSEMBL CDS 19494909 19495040 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 11; exon_id "ENSE00003469360.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4173 chr22 ENSEMBL exon 19495289 19495387 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 12; exon_id "ENSE00003614871.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4174 chr22 ENSEMBL CDS 19495289 19495387 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 12; exon_id "ENSE00003614871.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4175 chr22 ENSEMBL exon 19496053 19496214 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 13; exon_id "ENSE00003547547.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4176 chr22 ENSEMBL CDS 19496053 19496214 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 13; exon_id "ENSE00003547547.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4177 chr22 ENSEMBL exon 19502272 19502410 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 14; exon_id "ENSE00000650788.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4178 chr22 ENSEMBL CDS 19502272 19502410 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 14; exon_id "ENSE00000650788.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4179 chr22 ENSEMBL exon 19502488 19502571 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 15; exon_id "ENSE00000650789.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4180 chr22 ENSEMBL CDS 19502488 19502571 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 15; exon_id "ENSE00000650789.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4181 chr22 ENSEMBL exon 19504050 19504168 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 16; exon_id "ENSE00000650790.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4182 chr22 ENSEMBL CDS 19504050 19504168 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 16; exon_id "ENSE00000650790.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4183 chr22 ENSEMBL exon 19504340 19504416 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 17; exon_id "ENSE00003640334.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4184 chr22 ENSEMBL CDS 19504340 19504416 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 17; exon_id "ENSE00003640334.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4185 chr22 ENSEMBL exon 19506367 19506432 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 18; exon_id "ENSE00003583698.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4186 chr22 ENSEMBL CDS 19506367 19506428 . + 2 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 18; exon_id "ENSE00003583698.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4187 chr22 ENSEMBL stop_codon 19506429 19506431 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 18; exon_id "ENSE00003583698.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4188 chr22 ENSEMBL exon 19508004 19508134 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; exon_number 19; exon_id "ENSE00001326432.2"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4189 chr22 ENSEMBL UTR 19467416 19467491 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4190 chr22 ENSEMBL UTR 19506429 19506432 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4191 chr22 ENSEMBL UTR 19508004 19508134 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000263201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CDC45-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13762.1"; havana_gene "OTTHUMG00000150386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4192 chr22 HAVANA transcript 19467424 19483509 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000483431.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CDC45-007"; level 2; tag "basic"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4193 chr22 HAVANA exon 19467424 19467542 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000483431.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CDC45-007"; exon_number 1; exon_id "ENSE00001840884.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4194 chr22 HAVANA exon 19467681 19467740 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000483431.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CDC45-007"; exon_number 2; exon_id "ENSE00003648368.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4195 chr22 HAVANA exon 19468476 19468568 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000483431.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CDC45-007"; exon_number 3; exon_id "ENSE00003550141.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4196 chr22 HAVANA exon 19470213 19470350 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000483431.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CDC45-007"; exon_number 4; exon_id "ENSE00003565997.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4197 chr22 HAVANA exon 19471385 19471528 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000483431.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CDC45-007"; exon_number 5; exon_id "ENSE00003579413.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4198 chr22 HAVANA exon 19481850 19481905 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000483431.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CDC45-007"; exon_number 6; exon_id "ENSE00003511141.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4199 chr22 HAVANA exon 19482030 19482125 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000483431.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CDC45-007"; exon_number 7; exon_id "ENSE00003584664.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4200 chr22 HAVANA exon 19483504 19483509 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000483431.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CDC45-007"; exon_number 8; exon_id "ENSE00001951197.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4201 chr22 HAVANA transcript 19467461 19508101 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4202 chr22 HAVANA exon 19467461 19467542 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 1; exon_id "ENSE00001847035.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4203 chr22 HAVANA CDS 19467492 19467542 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 1; exon_id "ENSE00001847035.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4204 chr22 HAVANA start_codon 19467492 19467494 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 1; exon_id "ENSE00001847035.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4205 chr22 HAVANA exon 19467681 19467740 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 2; exon_id "ENSE00003484026.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4206 chr22 HAVANA CDS 19467681 19467740 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 2; exon_id "ENSE00003484026.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4207 chr22 HAVANA exon 19468476 19468568 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 3; exon_id "ENSE00003505829.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4208 chr22 HAVANA CDS 19468476 19468568 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 3; exon_id "ENSE00003505829.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4209 chr22 HAVANA exon 19471385 19471528 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 4; exon_id "ENSE00003694637.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4210 chr22 HAVANA CDS 19471385 19471528 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 4; exon_id "ENSE00003694637.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4211 chr22 HAVANA exon 19481850 19481905 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 5; exon_id "ENSE00003479778.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4212 chr22 HAVANA CDS 19481850 19481905 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 5; exon_id "ENSE00003479778.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4213 chr22 HAVANA exon 19483504 19483552 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 6; exon_id "ENSE00003688309.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4214 chr22 HAVANA CDS 19483504 19483552 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 6; exon_id "ENSE00003688309.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4215 chr22 HAVANA exon 19484909 19484970 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 7; exon_id "ENSE00003600829.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4216 chr22 HAVANA CDS 19484909 19484970 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 7; exon_id "ENSE00003600829.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4217 chr22 HAVANA exon 19486624 19486674 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 8; exon_id "ENSE00003560950.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4218 chr22 HAVANA CDS 19486624 19486674 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 8; exon_id "ENSE00003560950.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4219 chr22 HAVANA exon 19492885 19493004 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 9; exon_id "ENSE00000331191.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4220 chr22 HAVANA CDS 19492885 19493004 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 9; exon_id "ENSE00000331191.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4221 chr22 HAVANA exon 19494909 19495040 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 10; exon_id "ENSE00003469360.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4222 chr22 HAVANA CDS 19494909 19495040 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 10; exon_id "ENSE00003469360.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4223 chr22 HAVANA exon 19495289 19495387 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 11; exon_id "ENSE00003614871.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4224 chr22 HAVANA CDS 19495289 19495387 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 11; exon_id "ENSE00003614871.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4225 chr22 HAVANA exon 19496053 19496214 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 12; exon_id "ENSE00003547547.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4226 chr22 HAVANA CDS 19496053 19496214 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 12; exon_id "ENSE00003547547.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4227 chr22 HAVANA exon 19502272 19502410 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 13; exon_id "ENSE00000650788.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4228 chr22 HAVANA CDS 19502272 19502410 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 13; exon_id "ENSE00000650788.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4229 chr22 HAVANA exon 19502488 19502571 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 14; exon_id "ENSE00000650789.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4230 chr22 HAVANA CDS 19502488 19502571 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 14; exon_id "ENSE00000650789.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4231 chr22 HAVANA exon 19504050 19504168 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 15; exon_id "ENSE00000650790.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4232 chr22 HAVANA CDS 19504050 19504168 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 15; exon_id "ENSE00000650790.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4233 chr22 HAVANA exon 19504340 19504416 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 16; exon_id "ENSE00003640334.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4234 chr22 HAVANA CDS 19504340 19504416 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 16; exon_id "ENSE00003640334.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4235 chr22 HAVANA exon 19506367 19506432 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 17; exon_id "ENSE00003583698.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4236 chr22 HAVANA CDS 19506367 19506428 . + 2 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 17; exon_id "ENSE00003583698.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4237 chr22 HAVANA stop_codon 19506429 19506431 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 17; exon_id "ENSE00003583698.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4238 chr22 HAVANA exon 19508004 19508101 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; exon_number 18; exon_id "ENSE00001864730.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4239 chr22 HAVANA UTR 19467461 19467491 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4240 chr22 HAVANA UTR 19506429 19506432 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4241 chr22 HAVANA UTR 19508004 19508101 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000404724.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CDC45-002"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS54500.1"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4242 chr22 HAVANA transcript 19467673 19484967 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000487669.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-006"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4243 chr22 HAVANA exon 19467673 19467740 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000487669.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-006"; exon_number 1; exon_id "ENSE00001831080.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4244 chr22 HAVANA exon 19468476 19468568 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000487669.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-006"; exon_number 2; exon_id "ENSE00003550141.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4245 chr22 HAVANA exon 19470213 19470350 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000487669.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-006"; exon_number 3; exon_id "ENSE00003565997.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4246 chr22 HAVANA exon 19471385 19471528 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000487669.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-006"; exon_number 4; exon_id "ENSE00003579413.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4247 chr22 HAVANA exon 19481850 19481905 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000487669.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-006"; exon_number 5; exon_id "ENSE00003511141.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4248 chr22 HAVANA exon 19481997 19482125 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000487669.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-006"; exon_number 6; exon_id "ENSE00003565914.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4249 chr22 HAVANA exon 19483504 19483552 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000487669.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-006"; exon_number 7; exon_id "ENSE00003690435.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4250 chr22 HAVANA exon 19484909 19484967 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000487669.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-006"; exon_number 8; exon_id "ENSE00001937365.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4251 chr22 HAVANA transcript 19470274 19492893 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4252 chr22 HAVANA exon 19470274 19470350 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; exon_number 1; exon_id "ENSE00001658228.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4253 chr22 HAVANA CDS 19470274 19470350 . + 2 gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; exon_number 1; exon_id "ENSE00001658228.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4254 chr22 HAVANA exon 19471385 19471528 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; exon_number 2; exon_id "ENSE00003694637.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4255 chr22 HAVANA CDS 19471385 19471528 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; exon_number 2; exon_id "ENSE00003694637.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4256 chr22 HAVANA exon 19481850 19481905 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; exon_number 3; exon_id "ENSE00003479778.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4257 chr22 HAVANA CDS 19481850 19481905 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; exon_number 3; exon_id "ENSE00003479778.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4258 chr22 HAVANA exon 19481997 19482125 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; exon_number 4; exon_id "ENSE00003502732.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4259 chr22 HAVANA CDS 19481997 19482006 . + 1 gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; exon_number 4; exon_id "ENSE00003502732.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4260 chr22 HAVANA stop_codon 19482007 19482009 . + 0 gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; exon_number 4; exon_id "ENSE00003502732.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4261 chr22 HAVANA exon 19483504 19483552 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; exon_number 5; exon_id "ENSE00003690435.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4262 chr22 HAVANA exon 19484909 19484970 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; exon_number 6; exon_id "ENSE00003585176.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4263 chr22 HAVANA exon 19486624 19486674 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; exon_number 7; exon_id "ENSE00003487489.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4264 chr22 HAVANA exon 19492885 19492893 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; exon_number 8; exon_id "ENSE00001775254.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4265 chr22 HAVANA UTR 19482007 19482125 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4266 chr22 HAVANA UTR 19483504 19483552 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4267 chr22 HAVANA UTR 19484909 19484970 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4268 chr22 HAVANA UTR 19486624 19486674 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4269 chr22 HAVANA UTR 19492885 19492893 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000428937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CDC45-008"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4270 chr22 HAVANA transcript 19492577 19502307 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000471470.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-009"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317911.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4271 chr22 HAVANA exon 19492577 19493004 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000471470.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-009"; exon_number 1; exon_id "ENSE00001951175.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317911.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4272 chr22 HAVANA exon 19494909 19495040 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000471470.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-009"; exon_number 2; exon_id "ENSE00003652412.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317911.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4273 chr22 HAVANA exon 19495289 19495387 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000471470.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-009"; exon_number 3; exon_id "ENSE00003554660.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317911.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4274 chr22 HAVANA exon 19496053 19496214 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000471470.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-009"; exon_number 4; exon_id "ENSE00003670310.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317911.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4275 chr22 HAVANA exon 19502272 19502307 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000471470.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-009"; exon_number 5; exon_id "ENSE00001883104.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317911.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4276 chr22 HAVANA transcript 19503957 19508117 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000493724.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-010"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4277 chr22 HAVANA exon 19503957 19504168 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000493724.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-010"; exon_number 1; exon_id "ENSE00001867246.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4278 chr22 HAVANA exon 19504340 19504416 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000493724.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-010"; exon_number 2; exon_id "ENSE00003661306.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4279 chr22 HAVANA exon 19506367 19506432 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000493724.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-010"; exon_number 3; exon_id "ENSE00003673010.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4280 chr22 HAVANA exon 19508004 19508117 . + . gene_id "ENSG00000093009.5"; transcript_id "ENST00000493724.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CDC45"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CDC45-010"; exon_number 4; exon_id "ENSE00001899646.1"; level 2; havana_gene "OTTHUMG00000150386.1"; havana_transcript "OTTHUMT00000317912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4281 chr22 HAVANA gene 19510547 19515068 . - . gene_id "ENSG00000184113.8"; transcript_id "ENSG00000184113.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5"; level 2; havana_gene "OTTHUMG00000150441.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4282 chr22 HAVANA transcript 19510547 19515068 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000406028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-001"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318122.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4283 chr22 HAVANA exon 19514040 19515068 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000406028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-001"; exon_number 1; exon_id "ENSE00001555250.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318122.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4284 chr22 HAVANA exon 19510547 19512065 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000406028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-001"; exon_number 2; exon_id "ENSE00001563857.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318122.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4285 chr22 HAVANA CDS 19511125 19512033 . - 0 gene_id "ENSG00000184113.8"; transcript_id "ENST00000406028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-001"; exon_number 2; exon_id "ENSE00001563857.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318122.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4286 chr22 HAVANA start_codon 19512031 19512033 . - 0 gene_id "ENSG00000184113.8"; transcript_id "ENST00000406028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-001"; exon_number 2; exon_id "ENSE00001563857.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318122.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4287 chr22 HAVANA stop_codon 19511122 19511124 . - 0 gene_id "ENSG00000184113.8"; transcript_id "ENST00000406028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-001"; exon_number 2; exon_id "ENSE00001563857.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318122.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4288 chr22 HAVANA UTR 19514040 19515068 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000406028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-001"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318122.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4289 chr22 HAVANA UTR 19510547 19511124 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000406028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-001"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318122.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4290 chr22 HAVANA UTR 19512034 19512065 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000406028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-001"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318122.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4291 chr22 HAVANA transcript 19510550 19512906 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000403084.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318885.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4292 chr22 HAVANA exon 19510550 19512906 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000403084.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-003"; exon_number 1; exon_id "ENSE00001551416.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318885.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4293 chr22 HAVANA CDS 19511125 19512033 . - 0 gene_id "ENSG00000184113.8"; transcript_id "ENST00000403084.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-003"; exon_number 1; exon_id "ENSE00001551416.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318885.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4294 chr22 HAVANA start_codon 19512031 19512033 . - 0 gene_id "ENSG00000184113.8"; transcript_id "ENST00000403084.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-003"; exon_number 1; exon_id "ENSE00001551416.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318885.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4295 chr22 HAVANA stop_codon 19511122 19511124 . - 0 gene_id "ENSG00000184113.8"; transcript_id "ENST00000403084.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-003"; exon_number 1; exon_id "ENSE00001551416.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318885.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4296 chr22 HAVANA UTR 19510550 19511124 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000403084.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318885.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4297 chr22 HAVANA UTR 19512034 19512906 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000403084.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318885.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4298 chr22 HAVANA transcript 19510575 19512946 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000413119.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318123.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4299 chr22 HAVANA exon 19512678 19512946 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000413119.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-002"; exon_number 1; exon_id "ENSE00001790787.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318123.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4300 chr22 HAVANA exon 19510575 19512065 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000413119.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-002"; exon_number 2; exon_id "ENSE00002307033.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318123.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4301 chr22 HAVANA CDS 19511125 19512033 . - 0 gene_id "ENSG00000184113.8"; transcript_id "ENST00000413119.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-002"; exon_number 2; exon_id "ENSE00002307033.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318123.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4302 chr22 HAVANA start_codon 19512031 19512033 . - 0 gene_id "ENSG00000184113.8"; transcript_id "ENST00000413119.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-002"; exon_number 2; exon_id "ENSE00002307033.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318123.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4303 chr22 HAVANA stop_codon 19511122 19511124 . - 0 gene_id "ENSG00000184113.8"; transcript_id "ENST00000413119.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-002"; exon_number 2; exon_id "ENSE00002307033.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318123.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4304 chr22 HAVANA UTR 19512678 19512946 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000413119.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318123.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4305 chr22 HAVANA UTR 19510575 19511124 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000413119.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318123.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4306 chr22 HAVANA UTR 19512034 19512065 . - . gene_id "ENSG00000184113.8"; transcript_id "ENST00000413119.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN5-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13763.2"; havana_gene "OTTHUMG00000150441.3"; havana_transcript "OTTHUMT00000318123.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4307 chr22 HAVANA gene 19618273 19621097 . - . gene_id "ENSG00000230485.1"; transcript_id "ENSG00000230485.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000077.2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC000077.2"; level 2; havana_gene "OTTHUMG00000150438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4308 chr22 HAVANA transcript 19618273 19621097 . - . gene_id "ENSG00000230485.1"; transcript_id "ENST00000420012.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000077.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC000077.2-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150438.1"; havana_transcript "OTTHUMT00000318102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4309 chr22 HAVANA exon 19620971 19621097 . - . gene_id "ENSG00000230485.1"; transcript_id "ENST00000420012.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000077.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC000077.2-001"; exon_number 1; exon_id "ENSE00001604792.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150438.1"; havana_transcript "OTTHUMT00000318102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4310 chr22 HAVANA exon 19619243 19619690 . - . gene_id "ENSG00000230485.1"; transcript_id "ENST00000420012.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000077.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC000077.2-001"; exon_number 2; exon_id "ENSE00001633186.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150438.1"; havana_transcript "OTTHUMT00000318102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4311 chr22 HAVANA exon 19618273 19618650 . - . gene_id "ENSG00000230485.1"; transcript_id "ENST00000420012.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000077.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC000077.2-001"; exon_number 3; exon_id "ENSE00001719813.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150438.1"; havana_transcript "OTTHUMT00000318102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4312 chr22 HAVANA gene 19654546 19655078 . + . gene_id "ENSG00000225007.1"; transcript_id "ENSG00000225007.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC000067.1"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AC000067.1"; level 1; havana_gene "OTTHUMG00000150429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4313 chr22 HAVANA transcript 19654546 19655078 . + . gene_id "ENSG00000225007.1"; transcript_id "ENST00000452326.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC000067.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC000067.1-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150429.1"; havana_transcript "OTTHUMT00000318064.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4314 chr22 HAVANA exon 19654546 19654722 . + . gene_id "ENSG00000225007.1"; transcript_id "ENST00000452326.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC000067.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC000067.1-001"; exon_number 1; exon_id "ENSE00001690231.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150429.1"; havana_transcript "OTTHUMT00000318064.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4315 chr22 HAVANA exon 19654969 19655078 . + . gene_id "ENSG00000225007.1"; transcript_id "ENST00000452326.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC000067.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC000067.1-001"; exon_number 2; exon_id "ENSE00001710112.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150429.1"; havana_transcript "OTTHUMT00000318064.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4316 chr22 HAVANA gene 19701987 19712295 . + . gene_id "ENSG00000184702.13"; transcript_id "ENSG00000184702.13"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5"; level 2; havana_gene "OTTHUMG00000150399.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4317 chr22 HAVANA transcript 19701987 19710842 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4318 chr22 HAVANA exon 19701987 19702154 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 1; exon_id "ENSE00001719277.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4319 chr22 HAVANA CDS 19702112 19702154 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 1; exon_id "ENSE00001719277.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4320 chr22 HAVANA start_codon 19702112 19702114 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 1; exon_id "ENSE00001719277.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4321 chr22 HAVANA exon 19702304 19702314 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 2; exon_id "ENSE00001717340.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4322 chr22 HAVANA CDS 19702304 19702314 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 2; exon_id "ENSE00001717340.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4323 chr22 HAVANA exon 19707125 19707221 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 3; exon_id "ENSE00003516330.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4324 chr22 HAVANA CDS 19707125 19707221 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 3; exon_id "ENSE00003516330.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4325 chr22 HAVANA exon 19707329 19707415 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 4; exon_id "ENSE00001316957.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4326 chr22 HAVANA CDS 19707329 19707415 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 4; exon_id "ENSE00001316957.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4327 chr22 HAVANA exon 19707638 19707761 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 5; exon_id "ENSE00001290021.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4328 chr22 HAVANA CDS 19707638 19707761 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 5; exon_id "ENSE00001290021.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4329 chr22 HAVANA exon 19707843 19707977 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 6; exon_id "ENSE00001318523.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4330 chr22 HAVANA CDS 19707843 19707977 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 6; exon_id "ENSE00001318523.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4331 chr22 HAVANA exon 19708072 19708189 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 7; exon_id "ENSE00003541157.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4332 chr22 HAVANA CDS 19708072 19708189 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 7; exon_id "ENSE00003541157.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4333 chr22 HAVANA exon 19708291 19708392 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 8; exon_id "ENSE00003646197.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4334 chr22 HAVANA CDS 19708291 19708392 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 8; exon_id "ENSE00003646197.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4335 chr22 HAVANA exon 19709163 19709259 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 9; exon_id "ENSE00003690402.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4336 chr22 HAVANA CDS 19709163 19709259 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 9; exon_id "ENSE00003690402.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4337 chr22 HAVANA exon 19709345 19709480 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 10; exon_id "ENSE00003617070.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4338 chr22 HAVANA CDS 19709345 19709480 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 10; exon_id "ENSE00003617070.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4339 chr22 HAVANA exon 19709760 19709862 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 11; exon_id "ENSE00003513452.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4340 chr22 HAVANA CDS 19709760 19709862 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 11; exon_id "ENSE00003513452.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4341 chr22 HAVANA exon 19709951 19710842 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 12; exon_id "ENSE00003467523.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4342 chr22 HAVANA CDS 19709951 19710004 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 12; exon_id "ENSE00003467523.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4343 chr22 HAVANA stop_codon 19710005 19710007 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; exon_number 12; exon_id "ENSE00003467523.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4344 chr22 HAVANA UTR 19701987 19702111 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4345 chr22 HAVANA UTR 19710005 19710842 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13764.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317937.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4346 chr22 HAVANA transcript 19702027 19710797 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4347 chr22 HAVANA exon 19702027 19702154 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 1; exon_id "ENSE00001558137.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4348 chr22 HAVANA CDS 19702112 19702154 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 1; exon_id "ENSE00001558137.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4349 chr22 HAVANA start_codon 19702112 19702114 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 1; exon_id "ENSE00001558137.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4350 chr22 HAVANA exon 19702304 19702314 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 2; exon_id "ENSE00001717340.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4351 chr22 HAVANA CDS 19702304 19702314 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 2; exon_id "ENSE00001717340.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4352 chr22 HAVANA exon 19707125 19707221 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 3; exon_id "ENSE00003516330.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4353 chr22 HAVANA CDS 19707125 19707221 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 3; exon_id "ENSE00003516330.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4354 chr22 HAVANA exon 19707329 19707415 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 4; exon_id "ENSE00001316957.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4355 chr22 HAVANA CDS 19707329 19707415 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 4; exon_id "ENSE00001316957.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4356 chr22 HAVANA exon 19707638 19707761 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 5; exon_id "ENSE00001290021.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4357 chr22 HAVANA CDS 19707638 19707761 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 5; exon_id "ENSE00001290021.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4358 chr22 HAVANA exon 19707843 19707977 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 6; exon_id "ENSE00001318523.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4359 chr22 HAVANA CDS 19707843 19707977 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 6; exon_id "ENSE00001318523.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4360 chr22 HAVANA exon 19708072 19708189 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 7; exon_id "ENSE00003541157.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4361 chr22 HAVANA CDS 19708072 19708189 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 7; exon_id "ENSE00003541157.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4362 chr22 HAVANA exon 19708291 19708392 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 8; exon_id "ENSE00003646197.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4363 chr22 HAVANA CDS 19708291 19708392 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 8; exon_id "ENSE00003646197.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4364 chr22 HAVANA exon 19709163 19709259 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 9; exon_id "ENSE00003690402.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4365 chr22 HAVANA CDS 19709163 19709259 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 9; exon_id "ENSE00003690402.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4366 chr22 HAVANA exon 19709356 19709480 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 10; exon_id "ENSE00001557717.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4367 chr22 HAVANA CDS 19709356 19709480 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 10; exon_id "ENSE00001557717.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4368 chr22 HAVANA exon 19709760 19709862 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 11; exon_id "ENSE00003464587.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4369 chr22 HAVANA CDS 19709760 19709831 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 11; exon_id "ENSE00003464587.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4370 chr22 HAVANA stop_codon 19709832 19709834 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 11; exon_id "ENSE00003464587.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4371 chr22 HAVANA exon 19709951 19710797 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; exon_number 12; exon_id "ENSE00001552269.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4372 chr22 HAVANA UTR 19702027 19702111 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4373 chr22 HAVANA UTR 19709832 19709862 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4374 chr22 HAVANA UTR 19709951 19710797 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-014"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4375 chr22 HAVANA transcript 19702052 19710842 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4376 chr22 HAVANA exon 19702052 19702154 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 1; exon_id "ENSE00001312296.6"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4377 chr22 HAVANA CDS 19702112 19702154 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 1; exon_id "ENSE00001312296.6"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4378 chr22 HAVANA start_codon 19702112 19702114 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 1; exon_id "ENSE00001312296.6"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4379 chr22 HAVANA exon 19702304 19702314 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 2; exon_id "ENSE00001717340.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4380 chr22 HAVANA CDS 19702304 19702314 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 2; exon_id "ENSE00001717340.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4381 chr22 HAVANA exon 19707125 19707221 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 3; exon_id "ENSE00003516330.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4382 chr22 HAVANA CDS 19707125 19707221 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 3; exon_id "ENSE00003516330.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4383 chr22 HAVANA exon 19707329 19707415 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 4; exon_id "ENSE00001316957.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4384 chr22 HAVANA CDS 19707329 19707415 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 4; exon_id "ENSE00001316957.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4385 chr22 HAVANA exon 19707638 19707761 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 5; exon_id "ENSE00001290021.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4386 chr22 HAVANA CDS 19707638 19707761 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 5; exon_id "ENSE00001290021.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4387 chr22 HAVANA exon 19707843 19707977 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 6; exon_id "ENSE00001318523.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4388 chr22 HAVANA CDS 19707843 19707977 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 6; exon_id "ENSE00001318523.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4389 chr22 HAVANA exon 19708072 19708189 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 7; exon_id "ENSE00003541157.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4390 chr22 HAVANA CDS 19708072 19708189 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 7; exon_id "ENSE00003541157.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4391 chr22 HAVANA exon 19708291 19708392 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 8; exon_id "ENSE00003646197.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4392 chr22 HAVANA CDS 19708291 19708392 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 8; exon_id "ENSE00003646197.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4393 chr22 HAVANA exon 19709345 19709480 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 9; exon_id "ENSE00003659912.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4394 chr22 HAVANA CDS 19709345 19709371 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 9; exon_id "ENSE00003659912.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4395 chr22 HAVANA stop_codon 19709372 19709374 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 9; exon_id "ENSE00003659912.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4396 chr22 HAVANA exon 19709760 19710842 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; exon_number 10; exon_id "ENSE00001563192.2"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4397 chr22 HAVANA UTR 19702052 19702111 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4398 chr22 HAVANA UTR 19709372 19709480 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4399 chr22 HAVANA UTR 19709760 19710842 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000406172.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-015"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4400 chr22 HAVANA transcript 19702198 19709854 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4401 chr22 HAVANA exon 19702198 19702314 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 1; exon_id "ENSE00001778291.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4402 chr22 HAVANA exon 19707125 19707221 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 2; exon_id "ENSE00003660334.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4403 chr22 HAVANA CDS 19707212 19707221 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 2; exon_id "ENSE00003660334.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4404 chr22 HAVANA start_codon 19707212 19707214 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 2; exon_id "ENSE00003660334.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4405 chr22 HAVANA exon 19707329 19707415 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 3; exon_id "ENSE00001316957.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4406 chr22 HAVANA CDS 19707329 19707415 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 3; exon_id "ENSE00001316957.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4407 chr22 HAVANA exon 19707638 19707761 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 4; exon_id "ENSE00001290021.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4408 chr22 HAVANA CDS 19707638 19707761 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 4; exon_id "ENSE00001290021.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4409 chr22 HAVANA exon 19707843 19707977 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 5; exon_id "ENSE00001318523.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4410 chr22 HAVANA CDS 19707843 19707977 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 5; exon_id "ENSE00001318523.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4411 chr22 HAVANA exon 19708072 19708189 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 6; exon_id "ENSE00003541157.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4412 chr22 HAVANA CDS 19708072 19708189 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 6; exon_id "ENSE00003541157.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4413 chr22 HAVANA exon 19708291 19708392 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 7; exon_id "ENSE00003646197.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4414 chr22 HAVANA CDS 19708291 19708392 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 7; exon_id "ENSE00003646197.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4415 chr22 HAVANA exon 19709163 19709259 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 8; exon_id "ENSE00003690402.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4416 chr22 HAVANA CDS 19709163 19709259 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 8; exon_id "ENSE00003690402.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4417 chr22 HAVANA exon 19709345 19709480 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 9; exon_id "ENSE00003617070.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4418 chr22 HAVANA CDS 19709345 19709480 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 9; exon_id "ENSE00003617070.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4419 chr22 HAVANA exon 19709760 19709854 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 10; exon_id "ENSE00001715339.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4420 chr22 HAVANA CDS 19709760 19709854 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; exon_number 10; exon_id "ENSE00001715339.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4421 chr22 HAVANA UTR 19702198 19702314 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4422 chr22 HAVANA UTR 19707125 19707211 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000412544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317943.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4423 chr22 HAVANA transcript 19704743 19711739 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4424 chr22 HAVANA exon 19704743 19706341 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 1; exon_id "ENSE00001552420.2"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4425 chr22 HAVANA CDS 19706261 19706341 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 1; exon_id "ENSE00001552420.2"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4426 chr22 HAVANA start_codon 19706261 19706263 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 1; exon_id "ENSE00001552420.2"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4427 chr22 HAVANA exon 19707125 19707221 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 2; exon_id "ENSE00003516330.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4428 chr22 HAVANA CDS 19707125 19707221 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 2; exon_id "ENSE00003516330.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4429 chr22 HAVANA exon 19707329 19707415 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 3; exon_id "ENSE00001316957.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4430 chr22 HAVANA CDS 19707329 19707415 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 3; exon_id "ENSE00001316957.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4431 chr22 HAVANA exon 19707638 19707761 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 4; exon_id "ENSE00001290021.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4432 chr22 HAVANA CDS 19707638 19707761 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 4; exon_id "ENSE00001290021.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4433 chr22 HAVANA exon 19707843 19707977 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 5; exon_id "ENSE00001318523.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4434 chr22 HAVANA CDS 19707843 19707977 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 5; exon_id "ENSE00001318523.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4435 chr22 HAVANA exon 19708072 19708189 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 6; exon_id "ENSE00003541157.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4436 chr22 HAVANA CDS 19708072 19708189 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 6; exon_id "ENSE00003541157.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4437 chr22 HAVANA exon 19708291 19708392 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 7; exon_id "ENSE00003646197.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4438 chr22 HAVANA CDS 19708291 19708392 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 7; exon_id "ENSE00003646197.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4439 chr22 HAVANA exon 19709163 19709259 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 8; exon_id "ENSE00003690402.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4440 chr22 HAVANA CDS 19709163 19709259 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 8; exon_id "ENSE00003690402.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4441 chr22 HAVANA exon 19709345 19709480 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 9; exon_id "ENSE00003617070.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4442 chr22 HAVANA CDS 19709345 19709480 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 9; exon_id "ENSE00003617070.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4443 chr22 HAVANA exon 19709760 19709862 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 10; exon_id "ENSE00003513452.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4444 chr22 HAVANA CDS 19709760 19709862 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 10; exon_id "ENSE00003513452.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4445 chr22 HAVANA exon 19709951 19711102 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 11; exon_id "ENSE00003596438.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4446 chr22 HAVANA CDS 19709951 19710004 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 11; exon_id "ENSE00003596438.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4447 chr22 HAVANA stop_codon 19710005 19710007 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 11; exon_id "ENSE00003596438.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4448 chr22 HAVANA exon 19711377 19711739 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; exon_number 12; exon_id "ENSE00001683859.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4449 chr22 HAVANA UTR 19704743 19706260 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4450 chr22 HAVANA UTR 19710005 19711102 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4451 chr22 HAVANA UTR 19711377 19711739 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000455843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-003"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317939.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4452 chr22 HAVANA transcript 19704793 19709243 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4453 chr22 HAVANA exon 19704793 19704968 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 1; exon_id "ENSE00001681754.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4454 chr22 HAVANA CDS 19704801 19704968 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 1; exon_id "ENSE00001681754.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4455 chr22 HAVANA start_codon 19704801 19704803 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 1; exon_id "ENSE00001681754.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4456 chr22 HAVANA exon 19707125 19707221 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 2; exon_id "ENSE00003516330.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4457 chr22 HAVANA CDS 19707125 19707221 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 2; exon_id "ENSE00003516330.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4458 chr22 HAVANA exon 19707329 19707415 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 3; exon_id "ENSE00001316957.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4459 chr22 HAVANA CDS 19707329 19707415 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 3; exon_id "ENSE00001316957.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4460 chr22 HAVANA exon 19707638 19707761 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 4; exon_id "ENSE00001290021.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4461 chr22 HAVANA CDS 19707638 19707761 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 4; exon_id "ENSE00001290021.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4462 chr22 HAVANA exon 19707843 19707977 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 5; exon_id "ENSE00001318523.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4463 chr22 HAVANA CDS 19707843 19707977 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 5; exon_id "ENSE00001318523.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4464 chr22 HAVANA exon 19708072 19708189 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 6; exon_id "ENSE00003541157.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4465 chr22 HAVANA CDS 19708072 19708189 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 6; exon_id "ENSE00003541157.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4466 chr22 HAVANA exon 19708291 19708392 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 7; exon_id "ENSE00003646197.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4467 chr22 HAVANA CDS 19708291 19708392 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 7; exon_id "ENSE00003646197.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4468 chr22 HAVANA exon 19709163 19709243 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 8; exon_id "ENSE00001701155.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4469 chr22 HAVANA CDS 19709163 19709243 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; exon_number 8; exon_id "ENSE00001701155.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4470 chr22 HAVANA UTR 19704793 19704800 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4471 chr22 HAVANA transcript 19705682 19706578 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000490204.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SEPT5-011"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317960.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4472 chr22 HAVANA exon 19705682 19706341 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000490204.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SEPT5-011"; exon_number 1; exon_id "ENSE00001843875.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317960.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4473 chr22 HAVANA exon 19706465 19706578 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000490204.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SEPT5-011"; exon_number 2; exon_id "ENSE00001954696.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317960.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4474 chr22 HAVANA transcript 19705955 19710152 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4475 chr22 HAVANA exon 19705955 19706341 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 1; exon_id "ENSE00001562814.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4476 chr22 HAVANA CDS 19706261 19706341 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 1; exon_id "ENSE00001562814.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4477 chr22 HAVANA start_codon 19706261 19706263 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 1; exon_id "ENSE00001562814.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4478 chr22 HAVANA exon 19707125 19707221 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 2; exon_id "ENSE00003516330.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4479 chr22 HAVANA CDS 19707125 19707221 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 2; exon_id "ENSE00003516330.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4480 chr22 HAVANA exon 19707329 19707415 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 3; exon_id "ENSE00001316957.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4481 chr22 HAVANA CDS 19707329 19707415 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 3; exon_id "ENSE00001316957.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4482 chr22 HAVANA exon 19707638 19707761 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 4; exon_id "ENSE00001290021.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4483 chr22 HAVANA CDS 19707638 19707761 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 4; exon_id "ENSE00001290021.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4484 chr22 HAVANA exon 19707843 19707977 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 5; exon_id "ENSE00001318523.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4485 chr22 HAVANA CDS 19707843 19707977 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 5; exon_id "ENSE00001318523.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4486 chr22 HAVANA exon 19708072 19708189 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 6; exon_id "ENSE00003541157.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4487 chr22 HAVANA CDS 19708072 19708189 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 6; exon_id "ENSE00003541157.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4488 chr22 HAVANA exon 19708291 19708392 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 7; exon_id "ENSE00003646197.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4489 chr22 HAVANA CDS 19708291 19708392 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 7; exon_id "ENSE00003646197.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4490 chr22 HAVANA exon 19709163 19709259 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 8; exon_id "ENSE00003690402.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4491 chr22 HAVANA CDS 19709163 19709259 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 8; exon_id "ENSE00003690402.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4492 chr22 HAVANA exon 19709345 19709480 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 9; exon_id "ENSE00003617070.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4493 chr22 HAVANA CDS 19709345 19709480 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 9; exon_id "ENSE00003617070.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4494 chr22 HAVANA exon 19709760 19709862 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 10; exon_id "ENSE00003513452.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4495 chr22 HAVANA CDS 19709760 19709862 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 10; exon_id "ENSE00003513452.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4496 chr22 HAVANA exon 19709951 19710152 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 11; exon_id "ENSE00001547277.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4497 chr22 HAVANA CDS 19709951 19710004 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 11; exon_id "ENSE00001547277.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4498 chr22 HAVANA stop_codon 19710005 19710007 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; exon_number 11; exon_id "ENSE00001547277.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4499 chr22 HAVANA UTR 19705955 19706260 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4500 chr22 HAVANA UTR 19710005 19710152 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000383045.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SEPT5-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4501 chr22 HAVANA transcript 19705981 19710842 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4502 chr22 HAVANA exon 19705981 19706341 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 1; exon_id "ENSE00001700115.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4503 chr22 HAVANA CDS 19706261 19706341 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 1; exon_id "ENSE00001700115.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4504 chr22 HAVANA start_codon 19706261 19706263 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 1; exon_id "ENSE00001700115.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4505 chr22 HAVANA exon 19707125 19707221 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 2; exon_id "ENSE00003516330.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4506 chr22 HAVANA CDS 19707125 19707221 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 2; exon_id "ENSE00003516330.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4507 chr22 HAVANA exon 19707329 19707415 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 3; exon_id "ENSE00001316957.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4508 chr22 HAVANA CDS 19707329 19707415 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 3; exon_id "ENSE00001316957.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4509 chr22 HAVANA exon 19707638 19707761 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 4; exon_id "ENSE00001290021.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4510 chr22 HAVANA CDS 19707638 19707761 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 4; exon_id "ENSE00001290021.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4511 chr22 HAVANA exon 19707843 19707977 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 5; exon_id "ENSE00001318523.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4512 chr22 HAVANA CDS 19707843 19707977 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 5; exon_id "ENSE00001318523.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4513 chr22 HAVANA exon 19708072 19708189 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 6; exon_id "ENSE00003541157.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4514 chr22 HAVANA CDS 19708072 19708189 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 6; exon_id "ENSE00003541157.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4515 chr22 HAVANA exon 19708291 19708392 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 7; exon_id "ENSE00003646197.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4516 chr22 HAVANA CDS 19708291 19708392 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 7; exon_id "ENSE00003646197.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4517 chr22 HAVANA exon 19709163 19709259 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 8; exon_id "ENSE00003690402.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4518 chr22 HAVANA CDS 19709163 19709259 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 8; exon_id "ENSE00003690402.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4519 chr22 HAVANA exon 19709356 19709480 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 9; exon_id "ENSE00001557717.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4520 chr22 HAVANA CDS 19709356 19709480 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 9; exon_id "ENSE00001557717.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4521 chr22 HAVANA exon 19709760 19709862 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 10; exon_id "ENSE00003464587.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4522 chr22 HAVANA CDS 19709760 19709831 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 10; exon_id "ENSE00003464587.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4523 chr22 HAVANA stop_codon 19709832 19709834 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 10; exon_id "ENSE00003464587.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4524 chr22 HAVANA exon 19709951 19710842 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; exon_number 11; exon_id "ENSE00003693056.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4525 chr22 HAVANA UTR 19705981 19706260 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4526 chr22 HAVANA UTR 19709832 19709862 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4527 chr22 HAVANA UTR 19709951 19710842 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000438754.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS56224.1"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317938.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4528 chr22 HAVANA transcript 19705992 19712295 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4529 chr22 HAVANA exon 19705992 19706094 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 1; exon_id "ENSE00001602843.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4530 chr22 HAVANA exon 19707125 19707221 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 2; exon_id "ENSE00003660334.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4531 chr22 HAVANA CDS 19707212 19707221 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 2; exon_id "ENSE00003660334.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4532 chr22 HAVANA start_codon 19707212 19707214 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 2; exon_id "ENSE00003660334.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4533 chr22 HAVANA exon 19707329 19707415 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 3; exon_id "ENSE00001316957.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4534 chr22 HAVANA CDS 19707329 19707415 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 3; exon_id "ENSE00001316957.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4535 chr22 HAVANA exon 19707638 19707761 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 4; exon_id "ENSE00001290021.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4536 chr22 HAVANA CDS 19707638 19707761 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 4; exon_id "ENSE00001290021.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4537 chr22 HAVANA exon 19707843 19707977 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 5; exon_id "ENSE00001318523.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4538 chr22 HAVANA CDS 19707843 19707977 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 5; exon_id "ENSE00001318523.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4539 chr22 HAVANA exon 19708072 19708189 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 6; exon_id "ENSE00003541157.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4540 chr22 HAVANA CDS 19708072 19708189 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 6; exon_id "ENSE00003541157.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4541 chr22 HAVANA exon 19708291 19708392 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 7; exon_id "ENSE00003646197.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4542 chr22 HAVANA CDS 19708291 19708392 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 7; exon_id "ENSE00003646197.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4543 chr22 HAVANA exon 19709163 19709259 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 8; exon_id "ENSE00003690402.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4544 chr22 HAVANA CDS 19709163 19709259 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 8; exon_id "ENSE00003690402.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4545 chr22 HAVANA exon 19709345 19709480 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 9; exon_id "ENSE00003617070.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4546 chr22 HAVANA CDS 19709345 19709480 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 9; exon_id "ENSE00003617070.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4547 chr22 HAVANA exon 19709760 19709862 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 10; exon_id "ENSE00003513452.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4548 chr22 HAVANA CDS 19709760 19709862 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 10; exon_id "ENSE00003513452.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4549 chr22 HAVANA exon 19709951 19711102 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 11; exon_id "ENSE00003596438.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4550 chr22 HAVANA CDS 19709951 19710004 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 11; exon_id "ENSE00003596438.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4551 chr22 HAVANA stop_codon 19710005 19710007 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 11; exon_id "ENSE00003596438.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4552 chr22 HAVANA exon 19711377 19712295 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; exon_number 12; exon_id "ENSE00001790744.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4553 chr22 HAVANA UTR 19705992 19706094 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4554 chr22 HAVANA UTR 19707125 19707211 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4555 chr22 HAVANA UTR 19710005 19711102 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4556 chr22 HAVANA UTR 19711377 19712295 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000431044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SEPT5-006"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317942.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4557 chr22 HAVANA transcript 19706958 19708356 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4558 chr22 HAVANA exon 19706958 19707221 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; exon_number 1; exon_id "ENSE00001655012.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4559 chr22 HAVANA CDS 19707212 19707221 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; exon_number 1; exon_id "ENSE00001655012.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4560 chr22 HAVANA start_codon 19707212 19707214 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; exon_number 1; exon_id "ENSE00001655012.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4561 chr22 HAVANA exon 19707329 19707415 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; exon_number 2; exon_id "ENSE00001316957.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4562 chr22 HAVANA CDS 19707329 19707415 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; exon_number 2; exon_id "ENSE00001316957.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4563 chr22 HAVANA exon 19707638 19707761 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; exon_number 3; exon_id "ENSE00001290021.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4564 chr22 HAVANA CDS 19707638 19707761 . + 2 gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; exon_number 3; exon_id "ENSE00001290021.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4565 chr22 HAVANA exon 19707843 19707977 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; exon_number 4; exon_id "ENSE00001318523.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4566 chr22 HAVANA CDS 19707843 19707977 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; exon_number 4; exon_id "ENSE00001318523.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4567 chr22 HAVANA exon 19708072 19708189 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; exon_number 5; exon_id "ENSE00003541157.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4568 chr22 HAVANA CDS 19708072 19708189 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; exon_number 5; exon_id "ENSE00003541157.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4569 chr22 HAVANA exon 19708291 19708356 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; exon_number 6; exon_id "ENSE00001725494.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4570 chr22 HAVANA CDS 19708291 19708356 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; exon_number 6; exon_id "ENSE00001725494.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4571 chr22 HAVANA UTR 19706958 19707211 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000395109.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SEPT5-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4572 chr22 HAVANA transcript 19707053 19707736 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000477238.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-012"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4573 chr22 HAVANA exon 19707053 19707221 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000477238.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-012"; exon_number 1; exon_id "ENSE00001888144.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4574 chr22 HAVANA exon 19707329 19707736 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000477238.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-012"; exon_number 2; exon_id "ENSE00001836103.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4575 chr22 HAVANA transcript 19707711 19708397 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000413258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SEPT5-016"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318189.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4576 chr22 HAVANA exon 19707711 19707761 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000413258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SEPT5-016"; exon_number 1; exon_id "ENSE00001699597.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318189.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4577 chr22 HAVANA CDS 19707711 19707761 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000413258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SEPT5-016"; exon_number 1; exon_id "ENSE00001699597.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318189.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4578 chr22 HAVANA exon 19707843 19707977 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000413258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SEPT5-016"; exon_number 2; exon_id "ENSE00001318523.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318189.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4579 chr22 HAVANA CDS 19707843 19707977 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000413258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SEPT5-016"; exon_number 2; exon_id "ENSE00001318523.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318189.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4580 chr22 HAVANA exon 19708165 19708189 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000413258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SEPT5-016"; exon_number 3; exon_id "ENSE00001694973.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318189.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4581 chr22 HAVANA CDS 19708165 19708189 . + 1 gene_id "ENSG00000184702.13"; transcript_id "ENST00000413258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SEPT5-016"; exon_number 3; exon_id "ENSE00001694973.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318189.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4582 chr22 HAVANA exon 19708291 19708397 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000413258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SEPT5-016"; exon_number 4; exon_id "ENSE00001638830.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318189.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4583 chr22 HAVANA CDS 19708291 19708397 . + 0 gene_id "ENSG00000184702.13"; transcript_id "ENST00000413258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SEPT5-016"; exon_number 4; exon_id "ENSE00001638830.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000318189.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4584 chr22 HAVANA transcript 19707865 19709392 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000480423.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-013"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317985.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4585 chr22 HAVANA exon 19707865 19707977 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000480423.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-013"; exon_number 1; exon_id "ENSE00001956844.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317985.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4586 chr22 HAVANA exon 19708072 19708189 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000480423.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-013"; exon_number 2; exon_id "ENSE00003492607.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317985.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4587 chr22 HAVANA exon 19708291 19708392 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000480423.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-013"; exon_number 3; exon_id "ENSE00003474049.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317985.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4588 chr22 HAVANA exon 19709163 19709392 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000480423.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-013"; exon_number 4; exon_id "ENSE00001899091.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317985.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4589 chr22 HAVANA transcript 19708077 19711747 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000470814.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-005"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317941.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4590 chr22 HAVANA exon 19708077 19708189 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000470814.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-005"; exon_number 1; exon_id "ENSE00001910083.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317941.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4591 chr22 HAVANA exon 19708291 19708392 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000470814.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-005"; exon_number 2; exon_id "ENSE00003474049.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317941.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4592 chr22 HAVANA exon 19709163 19709259 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000470814.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-005"; exon_number 3; exon_id "ENSE00003653969.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317941.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4593 chr22 HAVANA exon 19709345 19709862 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000470814.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-005"; exon_number 4; exon_id "ENSE00001914294.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317941.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4594 chr22 HAVANA exon 19709951 19711102 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000470814.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-005"; exon_number 5; exon_id "ENSE00003673046.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317941.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4595 chr22 HAVANA exon 19711377 19711747 . + . gene_id "ENSG00000184702.13"; transcript_id "ENST00000470814.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SEPT5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SEPT5-005"; exon_number 6; exon_id "ENSE00001840201.1"; level 2; havana_gene "OTTHUMG00000150399.7"; havana_transcript "OTTHUMT00000317941.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4596 chr22 HAVANA gene 19710468 19712294 . + . gene_id "ENSG00000203618.5"; transcript_id "ENSG00000203618.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GP1BB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GP1BB"; level 2; havana_gene "OTTHUMG00000150397.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4597 chr22 HAVANA transcript 19710468 19712294 . + . gene_id "ENSG00000203618.5"; transcript_id "ENST00000366425.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GP1BB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GP1BB-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42980.1"; havana_gene "OTTHUMG00000150397.2"; havana_transcript "OTTHUMT00000318195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4598 chr22 HAVANA exon 19710468 19711102 . + . gene_id "ENSG00000203618.5"; transcript_id "ENST00000366425.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GP1BB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GP1BB-001"; exon_number 1; exon_id "ENSE00001543381.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42980.1"; havana_gene "OTTHUMG00000150397.2"; havana_transcript "OTTHUMT00000318195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4599 chr22 HAVANA CDS 19711093 19711102 . + 0 gene_id "ENSG00000203618.5"; transcript_id "ENST00000366425.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GP1BB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GP1BB-001"; exon_number 1; exon_id "ENSE00001543381.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42980.1"; havana_gene "OTTHUMG00000150397.2"; havana_transcript "OTTHUMT00000318195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4600 chr22 HAVANA start_codon 19711093 19711095 . + 0 gene_id "ENSG00000203618.5"; transcript_id "ENST00000366425.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GP1BB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GP1BB-001"; exon_number 1; exon_id "ENSE00001543381.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42980.1"; havana_gene "OTTHUMG00000150397.2"; havana_transcript "OTTHUMT00000318195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4601 chr22 HAVANA exon 19711377 19712294 . + . gene_id "ENSG00000203618.5"; transcript_id "ENST00000366425.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GP1BB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GP1BB-001"; exon_number 2; exon_id "ENSE00001543380.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42980.1"; havana_gene "OTTHUMG00000150397.2"; havana_transcript "OTTHUMT00000318195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4602 chr22 HAVANA CDS 19711377 19711984 . + 2 gene_id "ENSG00000203618.5"; transcript_id "ENST00000366425.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GP1BB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GP1BB-001"; exon_number 2; exon_id "ENSE00001543380.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42980.1"; havana_gene "OTTHUMG00000150397.2"; havana_transcript "OTTHUMT00000318195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4603 chr22 HAVANA stop_codon 19711985 19711987 . + 0 gene_id "ENSG00000203618.5"; transcript_id "ENST00000366425.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GP1BB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GP1BB-001"; exon_number 2; exon_id "ENSE00001543380.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42980.1"; havana_gene "OTTHUMG00000150397.2"; havana_transcript "OTTHUMT00000318195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4604 chr22 HAVANA UTR 19710468 19711092 . + . gene_id "ENSG00000203618.5"; transcript_id "ENST00000366425.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GP1BB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GP1BB-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42980.1"; havana_gene "OTTHUMG00000150397.2"; havana_transcript "OTTHUMT00000318195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4605 chr22 HAVANA UTR 19711985 19712294 . + . gene_id "ENSG00000203618.5"; transcript_id "ENST00000366425.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GP1BB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GP1BB-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42980.1"; havana_gene "OTTHUMG00000150397.2"; havana_transcript "OTTHUMT00000318195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4606 chr22 HAVANA gene 19744226 19771116 . + . gene_id "ENSG00000184058.8"; transcript_id "ENSG00000184058.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1"; level 2; havana_gene "OTTHUMG00000150421.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4607 chr22 HAVANA transcript 19744226 19754855 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4608 chr22 HAVANA exon 19744226 19744268 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 1; exon_id "ENSE00001372323.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4609 chr22 HAVANA exon 19747081 19747200 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 2; exon_id "ENSE00001384695.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4610 chr22 HAVANA CDS 19747167 19747200 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 2; exon_id "ENSE00001384695.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4611 chr22 HAVANA start_codon 19747167 19747169 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 2; exon_id "ENSE00001384695.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4612 chr22 HAVANA exon 19748428 19748803 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 3; exon_id "ENSE00001320190.4"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4613 chr22 HAVANA CDS 19748428 19748803 . + 2 gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 3; exon_id "ENSE00001320190.4"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4614 chr22 HAVANA exon 19750764 19750865 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 4; exon_id "ENSE00001317346.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4615 chr22 HAVANA CDS 19750764 19750865 . + 1 gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 4; exon_id "ENSE00001317346.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4616 chr22 HAVANA exon 19751678 19751849 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 5; exon_id "ENSE00001778543.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4617 chr22 HAVANA CDS 19751678 19751849 . + 1 gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 5; exon_id "ENSE00001778543.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4618 chr22 HAVANA exon 19752481 19752636 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 6; exon_id "ENSE00001313651.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4619 chr22 HAVANA CDS 19752481 19752636 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 6; exon_id "ENSE00001313651.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4620 chr22 HAVANA exon 19753281 19753348 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 7; exon_id "ENSE00003461701.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4621 chr22 HAVANA CDS 19753281 19753348 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 7; exon_id "ENSE00003461701.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4622 chr22 HAVANA exon 19753425 19753525 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 8; exon_id "ENSE00001330873.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4623 chr22 HAVANA CDS 19753425 19753525 . + 1 gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 8; exon_id "ENSE00001330873.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4624 chr22 HAVANA exon 19753912 19754855 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 9; exon_id "ENSE00001302335.5"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4625 chr22 HAVANA CDS 19753912 19754387 . + 2 gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 9; exon_id "ENSE00001302335.5"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4626 chr22 HAVANA stop_codon 19754388 19754390 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; exon_number 9; exon_id "ENSE00001302335.5"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4627 chr22 HAVANA UTR 19744226 19744268 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4628 chr22 HAVANA UTR 19747081 19747166 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4629 chr22 HAVANA UTR 19754388 19754855 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000332710.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TBX1-003"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13767.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4630 chr22 HAVANA transcript 19744226 19767069 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4631 chr22 HAVANA exon 19744226 19744268 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 1; exon_id "ENSE00001372323.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4632 chr22 HAVANA exon 19747081 19747200 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 2; exon_id "ENSE00001384695.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4633 chr22 HAVANA CDS 19747167 19747200 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 2; exon_id "ENSE00001384695.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4634 chr22 HAVANA start_codon 19747167 19747169 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 2; exon_id "ENSE00001384695.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4635 chr22 HAVANA exon 19748428 19748803 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 3; exon_id "ENSE00001320190.4"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4636 chr22 HAVANA CDS 19748428 19748803 . + 2 gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 3; exon_id "ENSE00001320190.4"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4637 chr22 HAVANA exon 19750764 19750865 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 4; exon_id "ENSE00001317346.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4638 chr22 HAVANA CDS 19750764 19750865 . + 1 gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 4; exon_id "ENSE00001317346.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4639 chr22 HAVANA exon 19751678 19751849 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 5; exon_id "ENSE00001778543.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4640 chr22 HAVANA CDS 19751678 19751849 . + 1 gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 5; exon_id "ENSE00001778543.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4641 chr22 HAVANA exon 19752481 19752636 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 6; exon_id "ENSE00001313651.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4642 chr22 HAVANA CDS 19752481 19752636 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 6; exon_id "ENSE00001313651.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4643 chr22 HAVANA exon 19753281 19753348 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 7; exon_id "ENSE00003461701.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4644 chr22 HAVANA CDS 19753281 19753348 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 7; exon_id "ENSE00003461701.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4645 chr22 HAVANA exon 19753425 19753525 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 8; exon_id "ENSE00001330873.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4646 chr22 HAVANA CDS 19753425 19753525 . + 1 gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 8; exon_id "ENSE00001330873.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4647 chr22 HAVANA exon 19766743 19767069 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 9; exon_id "ENSE00001390459.4"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4648 chr22 HAVANA CDS 19766743 19766927 . + 2 gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 9; exon_id "ENSE00001390459.4"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4649 chr22 HAVANA stop_codon 19766928 19766930 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; exon_number 9; exon_id "ENSE00001390459.4"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4650 chr22 HAVANA UTR 19744226 19744268 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4651 chr22 HAVANA UTR 19747081 19747166 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4652 chr22 HAVANA UTR 19766928 19767069 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000329705.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13766.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318033.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4653 chr22 HAVANA transcript 19744226 19771116 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4654 chr22 HAVANA exon 19744226 19744268 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 1; exon_id "ENSE00001372323.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4655 chr22 HAVANA exon 19747081 19747200 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 2; exon_id "ENSE00001384695.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4656 chr22 HAVANA CDS 19747167 19747200 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 2; exon_id "ENSE00001384695.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4657 chr22 HAVANA start_codon 19747167 19747169 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 2; exon_id "ENSE00001384695.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4658 chr22 HAVANA exon 19748428 19748803 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 3; exon_id "ENSE00001320190.4"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4659 chr22 HAVANA CDS 19748428 19748803 . + 2 gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 3; exon_id "ENSE00001320190.4"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4660 chr22 HAVANA exon 19750764 19750865 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 4; exon_id "ENSE00001317346.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4661 chr22 HAVANA CDS 19750764 19750865 . + 1 gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 4; exon_id "ENSE00001317346.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4662 chr22 HAVANA exon 19751678 19751849 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 5; exon_id "ENSE00001778543.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4663 chr22 HAVANA CDS 19751678 19751849 . + 1 gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 5; exon_id "ENSE00001778543.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4664 chr22 HAVANA exon 19752481 19752636 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 6; exon_id "ENSE00001313651.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4665 chr22 HAVANA CDS 19752481 19752636 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 6; exon_id "ENSE00001313651.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4666 chr22 HAVANA exon 19753281 19753348 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 7; exon_id "ENSE00003461701.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4667 chr22 HAVANA CDS 19753281 19753348 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 7; exon_id "ENSE00003461701.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4668 chr22 HAVANA exon 19753425 19753525 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 8; exon_id "ENSE00001330873.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4669 chr22 HAVANA CDS 19753425 19753525 . + 1 gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 8; exon_id "ENSE00001330873.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4670 chr22 HAVANA exon 19770436 19770555 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 9; exon_id "ENSE00001408084.2"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4671 chr22 HAVANA CDS 19770436 19770542 . + 2 gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 9; exon_id "ENSE00001408084.2"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4672 chr22 HAVANA stop_codon 19770543 19770545 . + 0 gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 9; exon_id "ENSE00001408084.2"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4673 chr22 HAVANA exon 19770837 19771116 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; exon_number 10; exon_id "ENSE00001538346.2"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4674 chr22 HAVANA UTR 19744226 19744268 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4675 chr22 HAVANA UTR 19747081 19747166 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4676 chr22 HAVANA UTR 19770543 19770555 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4677 chr22 HAVANA UTR 19770837 19771116 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000359500.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TBX1-001"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13765.1"; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318032.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4678 chr22 HAVANA transcript 19748720 19751225 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000475303.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TBX1-004"; level 2; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4679 chr22 HAVANA exon 19748720 19748803 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000475303.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TBX1-004"; exon_number 1; exon_id "ENSE00001842609.1"; level 2; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4680 chr22 HAVANA exon 19750764 19751225 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000475303.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TBX1-004"; exon_number 2; exon_id "ENSE00001812931.1"; level 2; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4681 chr22 HAVANA transcript 19752602 19753850 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000484336.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TBX1-005"; level 2; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318890.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4682 chr22 HAVANA exon 19752602 19752636 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000484336.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TBX1-005"; exon_number 1; exon_id "ENSE00001921389.1"; level 2; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318890.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4683 chr22 HAVANA exon 19753281 19753348 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000484336.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TBX1-005"; exon_number 2; exon_id "ENSE00003553406.1"; level 2; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318890.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4684 chr22 HAVANA exon 19753425 19753850 . + . gene_id "ENSG00000184058.8"; transcript_id "ENST00000484336.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TBX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TBX1-005"; exon_number 3; exon_id "ENSE00001893587.1"; level 2; havana_gene "OTTHUMG00000150421.2"; havana_transcript "OTTHUMT00000318890.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4685 chr22 HAVANA gene 19770747 19842462 . - . gene_id "ENSG00000185838.9"; transcript_id "ENSG00000185838.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L"; level 2; havana_gene "OTTHUMG00000150279.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4686 chr22 HAVANA transcript 19770747 19842462 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4687 chr22 HAVANA exon 19842343 19842462 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 1; exon_id "ENSE00001550867.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4688 chr22 HAVANA exon 19841966 19842062 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 2; exon_id "ENSE00003693672.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4689 chr22 HAVANA exon 19808751 19808898 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 3; exon_id "ENSE00001297632.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4690 chr22 HAVANA CDS 19808751 19808878 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 3; exon_id "ENSE00001297632.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4691 chr22 HAVANA start_codon 19808876 19808878 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 3; exon_id "ENSE00001297632.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4692 chr22 HAVANA exon 19808121 19808246 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 4; exon_id "ENSE00001318823.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4693 chr22 HAVANA CDS 19808121 19808246 . - 1 gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 4; exon_id "ENSE00001318823.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4694 chr22 HAVANA exon 19799808 19799970 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 5; exon_id "ENSE00003466940.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4695 chr22 HAVANA CDS 19799808 19799970 . - 1 gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 5; exon_id "ENSE00003466940.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4696 chr22 HAVANA exon 19794182 19794280 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 6; exon_id "ENSE00003554940.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4697 chr22 HAVANA CDS 19794182 19794280 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 6; exon_id "ENSE00003554940.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4698 chr22 HAVANA exon 19789524 19789739 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 7; exon_id "ENSE00003627395.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4699 chr22 HAVANA CDS 19789524 19789739 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 7; exon_id "ENSE00003627395.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4700 chr22 HAVANA exon 19770747 19776483 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 8; exon_id "ENSE00001321538.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4701 chr22 HAVANA CDS 19776235 19776483 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 8; exon_id "ENSE00001321538.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4702 chr22 HAVANA stop_codon 19776232 19776234 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; exon_number 8; exon_id "ENSE00001321538.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4703 chr22 HAVANA UTR 19842343 19842462 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4704 chr22 HAVANA UTR 19841966 19842062 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4705 chr22 HAVANA UTR 19808879 19808898 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4706 chr22 HAVANA UTR 19770747 19776234 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000329517.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000075202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4707 chr22 HAVANA transcript 19775938 19842366 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4708 chr22 HAVANA exon 19841966 19842366 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 1; exon_id "ENSE00001550885.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4709 chr22 HAVANA exon 19808751 19808898 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 2; exon_id "ENSE00001297632.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4710 chr22 HAVANA CDS 19808751 19808878 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 2; exon_id "ENSE00001297632.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4711 chr22 HAVANA start_codon 19808876 19808878 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 2; exon_id "ENSE00001297632.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4712 chr22 HAVANA exon 19808121 19808246 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 3; exon_id "ENSE00001318823.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4713 chr22 HAVANA CDS 19808121 19808246 . - 1 gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 3; exon_id "ENSE00001318823.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4714 chr22 HAVANA exon 19799808 19799970 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 4; exon_id "ENSE00003466940.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4715 chr22 HAVANA CDS 19799808 19799970 . - 1 gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 4; exon_id "ENSE00003466940.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4716 chr22 HAVANA exon 19794182 19794280 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 5; exon_id "ENSE00003554940.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4717 chr22 HAVANA CDS 19794182 19794280 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 5; exon_id "ENSE00003554940.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4718 chr22 HAVANA exon 19789524 19789739 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 6; exon_id "ENSE00003627395.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4719 chr22 HAVANA CDS 19789524 19789739 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 6; exon_id "ENSE00003627395.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4720 chr22 HAVANA exon 19775938 19776483 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 7; exon_id "ENSE00001548737.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4721 chr22 HAVANA CDS 19776235 19776483 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 7; exon_id "ENSE00001548737.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4722 chr22 HAVANA stop_codon 19776232 19776234 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; exon_number 7; exon_id "ENSE00001548737.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4723 chr22 HAVANA UTR 19841966 19842366 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4724 chr22 HAVANA UTR 19808879 19808898 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4725 chr22 HAVANA UTR 19775938 19776234 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000403325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13768.1"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317293.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4726 chr22 HAVANA transcript 19775941 19842462 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4727 chr22 HAVANA exon 19842343 19842462 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 1; exon_id "ENSE00001550867.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4728 chr22 HAVANA exon 19841966 19842062 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 2; exon_id "ENSE00003693672.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4729 chr22 HAVANA exon 19808751 19808898 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 3; exon_id "ENSE00001297632.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4730 chr22 HAVANA CDS 19808751 19808878 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 3; exon_id "ENSE00001297632.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4731 chr22 HAVANA start_codon 19808876 19808878 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 3; exon_id "ENSE00001297632.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4732 chr22 HAVANA exon 19808121 19808246 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 4; exon_id "ENSE00001318823.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4733 chr22 HAVANA CDS 19808121 19808246 . - 1 gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 4; exon_id "ENSE00001318823.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4734 chr22 HAVANA exon 19799808 19799970 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 5; exon_id "ENSE00003466940.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4735 chr22 HAVANA CDS 19799808 19799970 . - 1 gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 5; exon_id "ENSE00003466940.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4736 chr22 HAVANA exon 19794182 19794280 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 6; exon_id "ENSE00003554940.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4737 chr22 HAVANA CDS 19794182 19794280 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 6; exon_id "ENSE00003554940.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4738 chr22 HAVANA exon 19789626 19789739 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 7; exon_id "ENSE00001559338.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4739 chr22 HAVANA CDS 19789626 19789739 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 7; exon_id "ENSE00001559338.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4740 chr22 HAVANA exon 19775941 19776149 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 8; exon_id "ENSE00001564588.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4741 chr22 HAVANA CDS 19776144 19776149 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 8; exon_id "ENSE00001564588.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4742 chr22 HAVANA stop_codon 19776141 19776143 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; exon_number 8; exon_id "ENSE00001564588.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4743 chr22 HAVANA UTR 19842343 19842462 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4744 chr22 HAVANA UTR 19841966 19842062 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4745 chr22 HAVANA UTR 19808879 19808898 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4746 chr22 HAVANA UTR 19775941 19776143 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000405009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNB1L-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4747 chr22 HAVANA transcript 19775987 19842329 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000460402.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GNB1L-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317292.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4748 chr22 HAVANA exon 19842205 19842329 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000460402.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GNB1L-002"; exon_number 1; exon_id "ENSE00001955908.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317292.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4749 chr22 HAVANA exon 19841966 19842062 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000460402.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GNB1L-002"; exon_number 2; exon_id "ENSE00003693672.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317292.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4750 chr22 HAVANA exon 19799808 19799970 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000460402.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GNB1L-002"; exon_number 3; exon_id "ENSE00003507850.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317292.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4751 chr22 HAVANA exon 19794182 19794280 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000460402.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GNB1L-002"; exon_number 4; exon_id "ENSE00003498638.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317292.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4752 chr22 HAVANA exon 19789524 19789739 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000460402.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GNB1L-002"; exon_number 5; exon_id "ENSE00003584885.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317292.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4753 chr22 HAVANA exon 19775987 19776483 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000460402.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GNB1L-002"; exon_number 6; exon_id "ENSE00001862335.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317292.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4754 chr22 HAVANA transcript 19789522 19842339 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000481086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GNB1L-006"; level 2; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000318899.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4755 chr22 HAVANA exon 19841966 19842339 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000481086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GNB1L-006"; exon_number 1; exon_id "ENSE00001955037.1"; level 2; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000318899.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4756 chr22 HAVANA exon 19799808 19799970 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000481086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GNB1L-006"; exon_number 2; exon_id "ENSE00003507850.1"; level 2; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000318899.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4757 chr22 HAVANA exon 19794182 19794280 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000481086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GNB1L-006"; exon_number 3; exon_id "ENSE00003498638.1"; level 2; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000318899.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4758 chr22 HAVANA exon 19789522 19789739 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000481086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GNB1L-006"; exon_number 4; exon_id "ENSE00001838776.1"; level 2; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000318899.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4759 chr22 HAVANA transcript 19799818 19842366 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000453108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GNB1L-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4760 chr22 HAVANA exon 19841966 19842366 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000453108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GNB1L-004"; exon_number 1; exon_id "ENSE00001550885.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4761 chr22 HAVANA exon 19808751 19808898 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000453108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GNB1L-004"; exon_number 2; exon_id "ENSE00001297632.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4762 chr22 HAVANA CDS 19808751 19808878 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000453108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GNB1L-004"; exon_number 2; exon_id "ENSE00001297632.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4763 chr22 HAVANA start_codon 19808876 19808878 . - 0 gene_id "ENSG00000185838.9"; transcript_id "ENST00000453108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GNB1L-004"; exon_number 2; exon_id "ENSE00001297632.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4764 chr22 HAVANA exon 19799818 19799970 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000453108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GNB1L-004"; exon_number 3; exon_id "ENSE00001780138.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4765 chr22 HAVANA CDS 19799818 19799970 . - 1 gene_id "ENSG00000185838.9"; transcript_id "ENST00000453108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GNB1L-004"; exon_number 3; exon_id "ENSE00001780138.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4766 chr22 HAVANA UTR 19841966 19842366 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000453108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GNB1L-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4767 chr22 HAVANA UTR 19808879 19808898 . - . gene_id "ENSG00000185838.9"; transcript_id "ENST00000453108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNB1L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GNB1L-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150279.2"; havana_transcript "OTTHUMT00000317294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4768 chr22 HAVANA gene 19779817 19780617 . + . gene_id "ENSG00000235776.2"; transcript_id "ENSG00000235776.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000089.3"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC000089.3"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150618.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4769 chr22 HAVANA transcript 19779817 19780617 . + . gene_id "ENSG00000235776.2"; transcript_id "ENST00000424559.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000089.3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC000089.3-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150618.2"; havana_transcript "OTTHUMT00000319093.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4770 chr22 HAVANA exon 19779817 19780617 . + . gene_id "ENSG00000235776.2"; transcript_id "ENST00000424559.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000089.3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC000089.3-001"; exon_number 1; exon_id "ENSE00001622123.2"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150618.2"; havana_transcript "OTTHUMT00000319093.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4771 chr22 HAVANA gene 19833661 19842419 . - . gene_id "ENSG00000215012.4"; transcript_id "ENSG00000215012.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29"; level 2; havana_gene "OTTHUMG00000030314.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4772 chr22 HAVANA transcript 19833661 19842419 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000407472.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317288.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4773 chr22 HAVANA exon 19842343 19842419 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000407472.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-001"; exon_number 1; exon_id "ENSE00001552832.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317288.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4774 chr22 HAVANA exon 19841966 19842062 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000407472.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-001"; exon_number 2; exon_id "ENSE00003489628.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317288.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4775 chr22 HAVANA exon 19833661 19840009 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000407472.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-001"; exon_number 3; exon_id "ENSE00001556155.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317288.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4776 chr22 HAVANA CDS 19838693 19839784 . - 0 gene_id "ENSG00000215012.4"; transcript_id "ENST00000407472.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-001"; exon_number 3; exon_id "ENSE00001556155.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317288.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4777 chr22 HAVANA start_codon 19839782 19839784 . - 0 gene_id "ENSG00000215012.4"; transcript_id "ENST00000407472.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-001"; exon_number 3; exon_id "ENSE00001556155.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317288.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4778 chr22 HAVANA stop_codon 19838690 19838692 . - 0 gene_id "ENSG00000215012.4"; transcript_id "ENST00000407472.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-001"; exon_number 3; exon_id "ENSE00001556155.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317288.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4779 chr22 HAVANA UTR 19842343 19842419 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000407472.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317288.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4780 chr22 HAVANA UTR 19841966 19842062 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000407472.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317288.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4781 chr22 HAVANA UTR 19833661 19838692 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000407472.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317288.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4782 chr22 HAVANA UTR 19839785 19840009 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000407472.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317288.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4783 chr22 HAVANA transcript 19833669 19842363 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000328554.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317289.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4784 chr22 HAVANA exon 19842183 19842363 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000328554.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-002"; exon_number 1; exon_id "ENSE00001364867.3"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317289.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4785 chr22 HAVANA exon 19841966 19842062 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000328554.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-002"; exon_number 2; exon_id "ENSE00003489628.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317289.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4786 chr22 HAVANA exon 19833669 19840009 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000328554.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-002"; exon_number 3; exon_id "ENSE00001558592.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317289.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4787 chr22 HAVANA CDS 19838693 19839784 . - 0 gene_id "ENSG00000215012.4"; transcript_id "ENST00000328554.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-002"; exon_number 3; exon_id "ENSE00001558592.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317289.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4788 chr22 HAVANA start_codon 19839782 19839784 . - 0 gene_id "ENSG00000215012.4"; transcript_id "ENST00000328554.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-002"; exon_number 3; exon_id "ENSE00001558592.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317289.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4789 chr22 HAVANA stop_codon 19838690 19838692 . - 0 gene_id "ENSG00000215012.4"; transcript_id "ENST00000328554.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-002"; exon_number 3; exon_id "ENSE00001558592.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317289.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4790 chr22 HAVANA UTR 19842183 19842363 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000328554.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317289.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4791 chr22 HAVANA UTR 19841966 19842062 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000328554.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317289.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4792 chr22 HAVANA UTR 19833669 19838692 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000328554.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317289.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4793 chr22 HAVANA UTR 19839785 19840009 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000328554.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317289.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4794 chr22 HAVANA transcript 19833669 19842386 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000484072.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C22orf29-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317291.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4795 chr22 HAVANA exon 19842343 19842386 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000484072.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C22orf29-004"; exon_number 1; exon_id "ENSE00001321574.4"; level 2; tag "basic"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317291.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4796 chr22 HAVANA exon 19841966 19842062 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000484072.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C22orf29-004"; exon_number 2; exon_id "ENSE00003489628.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317291.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4797 chr22 HAVANA exon 19833669 19834912 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000484072.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C22orf29-004"; exon_number 3; exon_id "ENSE00001293779.6"; level 2; tag "basic"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317291.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4798 chr22 HAVANA transcript 19833669 19842409 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000405640.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317290.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4799 chr22 HAVANA exon 19841966 19842409 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000405640.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-003"; exon_number 1; exon_id "ENSE00001548881.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317290.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4800 chr22 HAVANA exon 19833669 19840009 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000405640.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-003"; exon_number 2; exon_id "ENSE00001558592.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317290.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4801 chr22 HAVANA CDS 19838693 19839784 . - 0 gene_id "ENSG00000215012.4"; transcript_id "ENST00000405640.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-003"; exon_number 2; exon_id "ENSE00001558592.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317290.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4802 chr22 HAVANA start_codon 19839782 19839784 . - 0 gene_id "ENSG00000215012.4"; transcript_id "ENST00000405640.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-003"; exon_number 2; exon_id "ENSE00001558592.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317290.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4803 chr22 HAVANA stop_codon 19838690 19838692 . - 0 gene_id "ENSG00000215012.4"; transcript_id "ENST00000405640.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-003"; exon_number 2; exon_id "ENSE00001558592.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317290.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4804 chr22 HAVANA UTR 19841966 19842409 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000405640.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317290.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4805 chr22 HAVANA UTR 19833669 19838692 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000405640.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317290.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4806 chr22 HAVANA UTR 19839785 19840009 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000405640.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf29-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13769.1"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000317290.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4807 chr22 HAVANA transcript 19839512 19842339 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000416337.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf29-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000318933.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4808 chr22 HAVANA exon 19842205 19842339 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000416337.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf29-005"; exon_number 1; exon_id "ENSE00001799486.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000318933.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4809 chr22 HAVANA exon 19841966 19842062 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000416337.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf29-005"; exon_number 2; exon_id "ENSE00003489628.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000318933.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4810 chr22 HAVANA exon 19839512 19840009 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000416337.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf29-005"; exon_number 3; exon_id "ENSE00001660572.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000318933.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4811 chr22 HAVANA CDS 19839512 19839784 . - 0 gene_id "ENSG00000215012.4"; transcript_id "ENST00000416337.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf29-005"; exon_number 3; exon_id "ENSE00001660572.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000318933.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4812 chr22 HAVANA start_codon 19839782 19839784 . - 0 gene_id "ENSG00000215012.4"; transcript_id "ENST00000416337.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf29-005"; exon_number 3; exon_id "ENSE00001660572.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000318933.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4813 chr22 HAVANA UTR 19842205 19842339 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000416337.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf29-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000318933.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4814 chr22 HAVANA UTR 19841966 19842062 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000416337.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf29-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000318933.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4815 chr22 HAVANA UTR 19839785 19840009 . - . gene_id "ENSG00000215012.4"; transcript_id "ENST00000416337.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf29"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C22orf29-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030314.3"; havana_transcript "OTTHUMT00000318933.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4816 chr22 HAVANA gene 19863040 19929341 . - . gene_id "ENSG00000184470.15"; transcript_id "ENSG00000184470.15"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2"; level 2; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
4817 chr22 HAVANA transcript 19863040 19920076 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4818 chr22 HAVANA Selenocysteine 19864634 19864636 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4819 chr22 HAVANA exon 19919880 19920076 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 1; exon_id "ENSE00001543313.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4820 chr22 HAVANA CDS 19919880 19919892 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 1; exon_id "ENSE00001543313.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4821 chr22 HAVANA start_codon 19919890 19919892 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 1; exon_id "ENSE00001543313.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4822 chr22 HAVANA exon 19918553 19918621 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 2; exon_id "ENSE00003692416.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4823 chr22 HAVANA CDS 19918553 19918621 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 2; exon_id "ENSE00003692416.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4824 chr22 HAVANA exon 19907066 19907122 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 3; exon_id "ENSE00003573028.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4825 chr22 HAVANA CDS 19907066 19907122 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 3; exon_id "ENSE00003573028.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4826 chr22 HAVANA exon 19906383 19906527 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 4; exon_id "ENSE00003631820.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4827 chr22 HAVANA CDS 19906383 19906527 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 4; exon_id "ENSE00003631820.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4828 chr22 HAVANA exon 19905666 19905740 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 5; exon_id "ENSE00003664003.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4829 chr22 HAVANA CDS 19905666 19905740 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 5; exon_id "ENSE00003664003.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4830 chr22 HAVANA exon 19903288 19903366 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 6; exon_id "ENSE00003641779.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4831 chr22 HAVANA CDS 19903288 19903366 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 6; exon_id "ENSE00003641779.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4832 chr22 HAVANA exon 19902737 19902799 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 7; exon_id "ENSE00003541647.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4833 chr22 HAVANA CDS 19902737 19902799 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 7; exon_id "ENSE00003541647.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4834 chr22 HAVANA exon 19898900 19898970 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 8; exon_id "ENSE00003584986.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4835 chr22 HAVANA CDS 19898900 19898970 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 8; exon_id "ENSE00003584986.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4836 chr22 HAVANA exon 19886572 19886591 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 9; exon_id "ENSE00003654204.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4837 chr22 HAVANA CDS 19886572 19886591 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 9; exon_id "ENSE00003654204.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4838 chr22 HAVANA exon 19885562 19885653 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 10; exon_id "ENSE00003520397.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4839 chr22 HAVANA CDS 19885562 19885653 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 10; exon_id "ENSE00003520397.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4840 chr22 HAVANA exon 19882930 19883104 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 11; exon_id "ENSE00003675318.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4841 chr22 HAVANA CDS 19882930 19883104 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 11; exon_id "ENSE00003675318.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4842 chr22 HAVANA exon 19870848 19870984 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 12; exon_id "ENSE00003598419.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4843 chr22 HAVANA CDS 19870848 19870984 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 12; exon_id "ENSE00003598419.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4844 chr22 HAVANA exon 19868145 19868240 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 13; exon_id "ENSE00003517747.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4845 chr22 HAVANA CDS 19868145 19868240 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 13; exon_id "ENSE00003517747.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4846 chr22 HAVANA exon 19867702 19867794 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 14; exon_id "ENSE00003487823.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4847 chr22 HAVANA CDS 19867702 19867794 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 14; exon_id "ENSE00003487823.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4848 chr22 HAVANA exon 19865889 19865960 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 15; exon_id "ENSE00003678714.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4849 chr22 HAVANA CDS 19865889 19865960 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 15; exon_id "ENSE00003678714.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4850 chr22 HAVANA exon 19865613 19865710 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 16; exon_id "ENSE00003504118.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4851 chr22 HAVANA CDS 19865613 19865710 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 16; exon_id "ENSE00003504118.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4852 chr22 HAVANA exon 19864563 19864757 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 17; exon_id "ENSE00003554198.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4853 chr22 HAVANA CDS 19864631 19864757 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 17; exon_id "ENSE00003554198.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4854 chr22 HAVANA stop_codon 19864628 19864630 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 17; exon_id "ENSE00003554198.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4855 chr22 HAVANA exon 19863040 19863330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; exon_number 18; exon_id "ENSE00001543309.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4856 chr22 HAVANA UTR 19919893 19920076 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4857 chr22 HAVANA UTR 19864563 19864630 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4858 chr22 HAVANA UTR 19863040 19863330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-004"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314904.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4859 chr22 HAVANA transcript 19863041 19903889 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000494454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-008"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314917.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4860 chr22 HAVANA exon 19903288 19903889 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000494454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-008"; exon_number 1; exon_id "ENSE00001952031.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314917.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4861 chr22 HAVANA exon 19902737 19902799 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000494454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-008"; exon_number 2; exon_id "ENSE00003630202.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314917.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4862 chr22 HAVANA exon 19898900 19898970 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000494454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-008"; exon_number 3; exon_id "ENSE00003650062.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314917.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4863 chr22 HAVANA exon 19886572 19886591 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000494454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-008"; exon_number 4; exon_id "ENSE00003603192.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314917.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4864 chr22 HAVANA exon 19885562 19885653 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000494454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-008"; exon_number 5; exon_id "ENSE00003529952.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314917.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4865 chr22 HAVANA exon 19882930 19883104 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000494454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-008"; exon_number 6; exon_id "ENSE00003570104.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314917.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4866 chr22 HAVANA exon 19870848 19870984 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000494454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-008"; exon_number 7; exon_id "ENSE00003542597.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314917.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4867 chr22 HAVANA exon 19868145 19868240 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000494454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-008"; exon_number 8; exon_id "ENSE00003466045.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314917.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4868 chr22 HAVANA exon 19867702 19867794 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000494454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-008"; exon_number 9; exon_id "ENSE00003548707.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314917.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4869 chr22 HAVANA exon 19865889 19865960 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000494454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-008"; exon_number 10; exon_id "ENSE00003643650.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314917.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4870 chr22 HAVANA exon 19865613 19865710 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000494454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-008"; exon_number 11; exon_id "ENSE00003505935.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314917.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4871 chr22 HAVANA exon 19864563 19864757 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000494454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-008"; exon_number 12; exon_id "ENSE00003491441.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314917.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4872 chr22 HAVANA exon 19863041 19863330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000494454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-008"; exon_number 13; exon_id "ENSE00001837626.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314917.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4873 chr22 HAVANA transcript 19863042 19929330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4874 chr22 HAVANA exon 19929224 19929330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 1; exon_id "ENSE00001904224.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4875 chr22 HAVANA exon 19918553 19918621 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 2; exon_id "ENSE00003504963.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4876 chr22 HAVANA exon 19906383 19906527 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 3; exon_id "ENSE00003494645.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4877 chr22 HAVANA exon 19905666 19905740 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 4; exon_id "ENSE00003558571.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4878 chr22 HAVANA exon 19903288 19903366 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 5; exon_id "ENSE00003647979.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4879 chr22 HAVANA exon 19902737 19902799 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 6; exon_id "ENSE00003630202.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4880 chr22 HAVANA exon 19898900 19898970 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 7; exon_id "ENSE00003650062.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4881 chr22 HAVANA exon 19886572 19886591 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 8; exon_id "ENSE00003603192.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4882 chr22 HAVANA exon 19885562 19885653 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 9; exon_id "ENSE00003529952.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4883 chr22 HAVANA exon 19882930 19883104 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 10; exon_id "ENSE00003570104.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4884 chr22 HAVANA exon 19870848 19870984 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 11; exon_id "ENSE00003542597.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4885 chr22 HAVANA exon 19868145 19868240 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 12; exon_id "ENSE00003466045.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4886 chr22 HAVANA exon 19867702 19867794 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 13; exon_id "ENSE00003548707.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4887 chr22 HAVANA exon 19865889 19865960 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 14; exon_id "ENSE00003643650.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4888 chr22 HAVANA exon 19865613 19865710 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 15; exon_id "ENSE00003505935.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4889 chr22 HAVANA exon 19864563 19864735 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 16; exon_id "ENSE00001936106.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4890 chr22 HAVANA exon 19863042 19863330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000474308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-007"; exon_number 17; exon_id "ENSE00001817173.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4891 chr22 HAVANA transcript 19863045 19868892 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-017"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314926.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4892 chr22 HAVANA exon 19868604 19868892 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-017"; exon_number 1; exon_id "ENSE00001948924.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314926.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4893 chr22 HAVANA exon 19868145 19868240 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-017"; exon_number 2; exon_id "ENSE00003466045.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314926.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4894 chr22 HAVANA exon 19867702 19867794 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-017"; exon_number 3; exon_id "ENSE00003548707.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314926.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4895 chr22 HAVANA exon 19865889 19865960 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-017"; exon_number 4; exon_id "ENSE00003643650.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314926.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4896 chr22 HAVANA exon 19865613 19865710 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-017"; exon_number 5; exon_id "ENSE00003505935.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314926.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4897 chr22 HAVANA exon 19864563 19864757 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-017"; exon_number 6; exon_id "ENSE00003491441.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314926.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4898 chr22 HAVANA exon 19863045 19863330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-017"; exon_number 7; exon_id "ENSE00001543330.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314926.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4899 chr22 HAVANA transcript 19863045 19872027 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000487165.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-010"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314919.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4900 chr22 HAVANA exon 19870848 19872027 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000487165.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-010"; exon_number 1; exon_id "ENSE00001889651.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314919.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4901 chr22 HAVANA exon 19868145 19868240 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000487165.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-010"; exon_number 2; exon_id "ENSE00003466045.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314919.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4902 chr22 HAVANA exon 19867702 19867794 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000487165.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-010"; exon_number 3; exon_id "ENSE00003548707.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314919.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4903 chr22 HAVANA exon 19865889 19865960 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000487165.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-010"; exon_number 4; exon_id "ENSE00003643650.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314919.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4904 chr22 HAVANA exon 19865613 19865710 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000487165.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-010"; exon_number 5; exon_id "ENSE00003505935.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314919.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4905 chr22 HAVANA exon 19864563 19864757 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000487165.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-010"; exon_number 6; exon_id "ENSE00003491441.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314919.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4906 chr22 HAVANA exon 19863045 19863330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000487165.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-010"; exon_number 7; exon_id "ENSE00001543330.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314919.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4907 chr22 HAVANA transcript 19863045 19929333 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4908 chr22 HAVANA Selenocysteine 19864634 19864636 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4909 chr22 HAVANA exon 19929224 19929333 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 1; exon_id "ENSE00001543323.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4910 chr22 HAVANA CDS 19929224 19929326 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 1; exon_id "ENSE00001543323.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4911 chr22 HAVANA start_codon 19929324 19929326 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 1; exon_id "ENSE00001543323.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4912 chr22 HAVANA exon 19918553 19918621 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 2; exon_id "ENSE00003692416.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4913 chr22 HAVANA CDS 19918553 19918621 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 2; exon_id "ENSE00003692416.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4914 chr22 HAVANA exon 19907066 19907122 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 3; exon_id "ENSE00003573028.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4915 chr22 HAVANA CDS 19907066 19907122 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 3; exon_id "ENSE00003573028.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4916 chr22 HAVANA exon 19906383 19906527 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 4; exon_id "ENSE00003631820.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4917 chr22 HAVANA CDS 19906383 19906527 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 4; exon_id "ENSE00003631820.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4918 chr22 HAVANA exon 19905666 19905740 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 5; exon_id "ENSE00003664003.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4919 chr22 HAVANA CDS 19905666 19905740 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 5; exon_id "ENSE00003664003.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4920 chr22 HAVANA exon 19903288 19903366 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 6; exon_id "ENSE00003641779.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4921 chr22 HAVANA CDS 19903288 19903366 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 6; exon_id "ENSE00003641779.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4922 chr22 HAVANA exon 19902737 19902799 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 7; exon_id "ENSE00003541647.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4923 chr22 HAVANA CDS 19902737 19902799 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 7; exon_id "ENSE00003541647.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4924 chr22 HAVANA exon 19898900 19898970 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 8; exon_id "ENSE00003584986.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4925 chr22 HAVANA CDS 19898900 19898970 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 8; exon_id "ENSE00003584986.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4926 chr22 HAVANA exon 19886572 19886591 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 9; exon_id "ENSE00003654204.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4927 chr22 HAVANA CDS 19886572 19886591 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 9; exon_id "ENSE00003654204.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4928 chr22 HAVANA exon 19885562 19885653 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 10; exon_id "ENSE00003520397.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4929 chr22 HAVANA CDS 19885562 19885653 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 10; exon_id "ENSE00003520397.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4930 chr22 HAVANA exon 19882930 19883104 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 11; exon_id "ENSE00003675318.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4931 chr22 HAVANA CDS 19882930 19883104 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 11; exon_id "ENSE00003675318.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4932 chr22 HAVANA exon 19870848 19870984 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 12; exon_id "ENSE00003598419.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4933 chr22 HAVANA CDS 19870848 19870984 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 12; exon_id "ENSE00003598419.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4934 chr22 HAVANA exon 19868145 19868240 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 13; exon_id "ENSE00003517747.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4935 chr22 HAVANA CDS 19868145 19868240 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 13; exon_id "ENSE00003517747.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4936 chr22 HAVANA exon 19867702 19867794 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 14; exon_id "ENSE00003487823.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
4937 chr22 HAVANA CDS 19867702 19867794 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 14; exon_id "ENSE00003487823.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4938 chr22 HAVANA exon 19865889 19865960 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 15; exon_id "ENSE00003678714.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4939 chr22 HAVANA CDS 19865889 19865960 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 15; exon_id "ENSE00003678714.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4940 chr22 HAVANA exon 19865613 19865710 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 16; exon_id "ENSE00003504118.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4941 chr22 HAVANA CDS 19865613 19865710 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 16; exon_id "ENSE00003504118.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4942 chr22 HAVANA exon 19864563 19864757 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 17; exon_id "ENSE00003554198.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4943 chr22 HAVANA CDS 19864631 19864757 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 17; exon_id "ENSE00003554198.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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4944 chr22 HAVANA stop_codon 19864628 19864630 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 17; exon_id "ENSE00003554198.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
4945 chr22 HAVANA exon 19863045 19863330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; exon_number 18; exon_id "ENSE00001543330.1"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4946 chr22 HAVANA UTR 19929327 19929333 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
4947 chr22 HAVANA UTR 19864563 19864630 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
4948 chr22 HAVANA UTR 19863045 19863330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-003"; level 2; tag "NMD_exception"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; tag "seleno"; ccdsid "CCDS42981.1"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314903.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4949 chr22 HAVANA transcript 19863045 19929341 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4950 chr22 HAVANA exon 19929224 19929341 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 1; exon_id "ENSE00001543378.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4951 chr22 HAVANA CDS 19929224 19929326 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 1; exon_id "ENSE00001543378.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4952 chr22 HAVANA start_codon 19929324 19929326 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 1; exon_id "ENSE00001543378.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4953 chr22 HAVANA exon 19907066 19907122 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 2; exon_id "ENSE00003573028.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4954 chr22 HAVANA CDS 19907066 19907122 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 2; exon_id "ENSE00003573028.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4955 chr22 HAVANA exon 19906383 19906527 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 3; exon_id "ENSE00003631820.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4956 chr22 HAVANA CDS 19906383 19906527 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 3; exon_id "ENSE00003631820.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4957 chr22 HAVANA exon 19905666 19905740 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 4; exon_id "ENSE00003664003.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4958 chr22 HAVANA CDS 19905666 19905740 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 4; exon_id "ENSE00003664003.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4959 chr22 HAVANA exon 19903288 19903366 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 5; exon_id "ENSE00003641779.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4960 chr22 HAVANA CDS 19903288 19903366 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 5; exon_id "ENSE00003641779.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4961 chr22 HAVANA exon 19902737 19902799 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 6; exon_id "ENSE00003541647.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4962 chr22 HAVANA CDS 19902737 19902799 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 6; exon_id "ENSE00003541647.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4963 chr22 HAVANA exon 19898900 19898970 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 7; exon_id "ENSE00003584986.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4964 chr22 HAVANA CDS 19898900 19898970 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 7; exon_id "ENSE00003584986.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4965 chr22 HAVANA exon 19886572 19886591 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 8; exon_id "ENSE00003654204.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4966 chr22 HAVANA CDS 19886572 19886591 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 8; exon_id "ENSE00003654204.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4967 chr22 HAVANA exon 19885562 19885653 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 9; exon_id "ENSE00003520397.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4968 chr22 HAVANA CDS 19885562 19885653 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 9; exon_id "ENSE00003520397.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4969 chr22 HAVANA exon 19882930 19883104 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 10; exon_id "ENSE00003675318.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4970 chr22 HAVANA CDS 19882930 19883104 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 10; exon_id "ENSE00003675318.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4971 chr22 HAVANA exon 19870848 19870984 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 11; exon_id "ENSE00003598419.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4972 chr22 HAVANA CDS 19870848 19870984 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 11; exon_id "ENSE00003598419.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4973 chr22 HAVANA exon 19868145 19868240 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 12; exon_id "ENSE00003517747.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4974 chr22 HAVANA CDS 19868145 19868240 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 12; exon_id "ENSE00003517747.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4975 chr22 HAVANA exon 19867702 19867794 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 13; exon_id "ENSE00003487823.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4976 chr22 HAVANA CDS 19867702 19867794 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 13; exon_id "ENSE00003487823.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4977 chr22 HAVANA exon 19865889 19865960 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 14; exon_id "ENSE00003678714.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4978 chr22 HAVANA CDS 19865889 19865960 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 14; exon_id "ENSE00003678714.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4979 chr22 HAVANA exon 19865613 19865710 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 15; exon_id "ENSE00003504118.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4980 chr22 HAVANA CDS 19865613 19865710 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 15; exon_id "ENSE00003504118.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4981 chr22 HAVANA exon 19864563 19864757 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 16; exon_id "ENSE00003554198.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
4982 chr22 HAVANA CDS 19864637 19864757 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 16; exon_id "ENSE00003554198.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4983 chr22 HAVANA stop_codon 19864634 19864636 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 16; exon_id "ENSE00003554198.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4984 chr22 HAVANA exon 19863045 19863330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; exon_number 17; exon_id "ENSE00001543330.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4985 chr22 HAVANA UTR 19929327 19929341 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4986 chr22 HAVANA UTR 19864563 19864636 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4987 chr22 HAVANA UTR 19863045 19863330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400525.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TXNRD2-006"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314906.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4988 chr22 HAVANA transcript 19863047 19868870 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000495655.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-011"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314920.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4989 chr22 HAVANA exon 19868145 19868870 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000495655.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-011"; exon_number 1; exon_id "ENSE00001955991.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314920.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4990 chr22 HAVANA exon 19867702 19867794 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000495655.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-011"; exon_number 2; exon_id "ENSE00003548707.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314920.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4991 chr22 HAVANA exon 19865889 19865960 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000495655.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-011"; exon_number 3; exon_id "ENSE00003643650.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314920.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4992 chr22 HAVANA exon 19865613 19865710 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000495655.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-011"; exon_number 4; exon_id "ENSE00003505935.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314920.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4993 chr22 HAVANA exon 19863047 19864757 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000495655.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-011"; exon_number 5; exon_id "ENSE00001830509.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314920.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4994 chr22 HAVANA transcript 19863070 19929326 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4995 chr22 HAVANA Selenocysteine 19864634 19864636 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4996 chr22 HAVANA exon 19929224 19929326 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 1; exon_id "ENSE00001543317.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4997 chr22 HAVANA CDS 19929224 19929326 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 1; exon_id "ENSE00001543317.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
4998 chr22 HAVANA start_codon 19929324 19929326 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 1; exon_id "ENSE00001543317.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
4999 chr22 HAVANA exon 19918553 19918618 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 2; exon_id "ENSE00001543316.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5000 chr22 HAVANA CDS 19918553 19918618 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 2; exon_id "ENSE00001543316.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5001 chr22 HAVANA exon 19907066 19907122 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 3; exon_id "ENSE00003573028.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5002 chr22 HAVANA CDS 19907066 19907122 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 3; exon_id "ENSE00003573028.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5003 chr22 HAVANA exon 19906383 19906527 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 4; exon_id "ENSE00003631820.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5004 chr22 HAVANA CDS 19906383 19906527 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 4; exon_id "ENSE00003631820.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5005 chr22 HAVANA exon 19905666 19905740 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 5; exon_id "ENSE00003664003.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5006 chr22 HAVANA CDS 19905666 19905740 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 5; exon_id "ENSE00003664003.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5007 chr22 HAVANA exon 19903288 19903366 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 6; exon_id "ENSE00003641779.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5008 chr22 HAVANA CDS 19903288 19903366 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 6; exon_id "ENSE00003641779.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5009 chr22 HAVANA exon 19902737 19902799 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 7; exon_id "ENSE00003541647.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5010 chr22 HAVANA CDS 19902737 19902799 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 7; exon_id "ENSE00003541647.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5011 chr22 HAVANA exon 19898900 19898970 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 8; exon_id "ENSE00003584986.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5012 chr22 HAVANA CDS 19898900 19898970 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 8; exon_id "ENSE00003584986.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5013 chr22 HAVANA exon 19886572 19886591 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 9; exon_id "ENSE00003654204.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5014 chr22 HAVANA CDS 19886572 19886591 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 9; exon_id "ENSE00003654204.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5015 chr22 HAVANA exon 19885562 19885653 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 10; exon_id "ENSE00003520397.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5016 chr22 HAVANA CDS 19885562 19885653 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 10; exon_id "ENSE00003520397.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5017 chr22 HAVANA exon 19882930 19883104 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 11; exon_id "ENSE00003675318.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5018 chr22 HAVANA CDS 19882930 19883104 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 11; exon_id "ENSE00003675318.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5019 chr22 HAVANA exon 19870848 19870984 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 12; exon_id "ENSE00003598419.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5020 chr22 HAVANA CDS 19870848 19870984 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 12; exon_id "ENSE00003598419.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5021 chr22 HAVANA exon 19868145 19868240 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 13; exon_id "ENSE00003517747.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5022 chr22 HAVANA CDS 19868145 19868240 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 13; exon_id "ENSE00003517747.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5023 chr22 HAVANA exon 19867702 19867794 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 14; exon_id "ENSE00003487823.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5024 chr22 HAVANA CDS 19867702 19867794 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 14; exon_id "ENSE00003487823.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5025 chr22 HAVANA exon 19865889 19865960 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 15; exon_id "ENSE00003678714.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5026 chr22 HAVANA CDS 19865889 19865960 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 15; exon_id "ENSE00003678714.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5027 chr22 HAVANA exon 19865613 19865710 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 16; exon_id "ENSE00003504118.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5028 chr22 HAVANA CDS 19865613 19865710 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 16; exon_id "ENSE00003504118.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5029 chr22 HAVANA exon 19863070 19864757 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 17; exon_id "ENSE00001543315.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5030 chr22 HAVANA CDS 19864631 19864757 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 17; exon_id "ENSE00001543315.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5031 chr22 HAVANA stop_codon 19864628 19864630 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; exon_number 17; exon_id "ENSE00001543315.1"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5032 chr22 HAVANA UTR 19863070 19864630 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000400519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TXNRD2-012"; level 2; tag "basic"; tag "appris_candidate"; tag "seleno"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314921.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5033 chr22 ENSEMBL transcript 19863070 19929326 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5034 chr22 ENSEMBL exon 19929224 19929326 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 1; exon_id "ENSE00001543317.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5035 chr22 ENSEMBL CDS 19929224 19929326 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 1; exon_id "ENSE00001543317.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5036 chr22 ENSEMBL start_codon 19929324 19929326 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 1; exon_id "ENSE00001543317.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5037 chr22 ENSEMBL exon 19918553 19918618 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 2; exon_id "ENSE00001543316.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5038 chr22 ENSEMBL CDS 19918553 19918618 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 2; exon_id "ENSE00001543316.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5039 chr22 ENSEMBL exon 19907066 19907122 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 3; exon_id "ENSE00003573028.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5040 chr22 ENSEMBL CDS 19907066 19907122 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 3; exon_id "ENSE00003573028.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5041 chr22 ENSEMBL exon 19906383 19906527 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 4; exon_id "ENSE00003631820.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5042 chr22 ENSEMBL CDS 19906383 19906527 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 4; exon_id "ENSE00003631820.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5043 chr22 ENSEMBL exon 19905666 19905740 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 5; exon_id "ENSE00003664003.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5044 chr22 ENSEMBL CDS 19905666 19905740 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 5; exon_id "ENSE00003664003.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5045 chr22 ENSEMBL exon 19903288 19903366 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 6; exon_id "ENSE00003641779.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5046 chr22 ENSEMBL CDS 19903288 19903366 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 6; exon_id "ENSE00003641779.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5047 chr22 ENSEMBL exon 19902737 19902799 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 7; exon_id "ENSE00003541647.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5048 chr22 ENSEMBL CDS 19902737 19902799 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 7; exon_id "ENSE00003541647.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5049 chr22 ENSEMBL exon 19898900 19898970 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 8; exon_id "ENSE00003584986.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5050 chr22 ENSEMBL CDS 19898900 19898970 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 8; exon_id "ENSE00003584986.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5051 chr22 ENSEMBL exon 19886572 19886591 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 9; exon_id "ENSE00003654204.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5052 chr22 ENSEMBL CDS 19886572 19886591 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 9; exon_id "ENSE00003654204.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5053 chr22 ENSEMBL exon 19885562 19885653 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 10; exon_id "ENSE00003520397.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5054 chr22 ENSEMBL CDS 19885562 19885653 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 10; exon_id "ENSE00003520397.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5055 chr22 ENSEMBL exon 19882930 19883104 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 11; exon_id "ENSE00003675318.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5056 chr22 ENSEMBL CDS 19882930 19883104 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 11; exon_id "ENSE00003675318.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5057 chr22 ENSEMBL exon 19870848 19870984 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 12; exon_id "ENSE00003598419.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5058 chr22 ENSEMBL CDS 19870848 19870984 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 12; exon_id "ENSE00003598419.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5059 chr22 ENSEMBL exon 19868145 19868240 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 13; exon_id "ENSE00003517747.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5060 chr22 ENSEMBL CDS 19868145 19868240 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 13; exon_id "ENSE00003517747.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5061 chr22 ENSEMBL exon 19867702 19867794 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 14; exon_id "ENSE00003487823.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5062 chr22 ENSEMBL CDS 19867702 19867794 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 14; exon_id "ENSE00003487823.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5063 chr22 ENSEMBL exon 19865889 19865960 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 15; exon_id "ENSE00003678714.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5064 chr22 ENSEMBL CDS 19865889 19865960 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 15; exon_id "ENSE00003678714.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5065 chr22 ENSEMBL exon 19865613 19865710 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 16; exon_id "ENSE00003504118.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5066 chr22 ENSEMBL CDS 19865613 19865710 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 16; exon_id "ENSE00003504118.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5067 chr22 ENSEMBL exon 19863070 19864757 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 17; exon_id "ENSE00001543315.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5068 chr22 ENSEMBL CDS 19864637 19864757 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 17; exon_id "ENSE00001543315.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5069 chr22 ENSEMBL stop_codon 19864634 19864636 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; exon_number 17; exon_id "ENSE00001543315.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5070 chr22 ENSEMBL UTR 19863070 19864636 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000535882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-202"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5071 chr22 ENSEMBL transcript 19863126 19919951 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5072 chr22 ENSEMBL exon 19919880 19919951 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 1; exon_id "ENSE00002205865.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5073 chr22 ENSEMBL CDS 19919880 19919892 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 1; exon_id "ENSE00002205865.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5074 chr22 ENSEMBL start_codon 19919890 19919892 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 1; exon_id "ENSE00002205865.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5075 chr22 ENSEMBL exon 19918553 19918621 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 2; exon_id "ENSE00003692416.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5076 chr22 ENSEMBL CDS 19918553 19918621 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 2; exon_id "ENSE00003692416.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5077 chr22 ENSEMBL exon 19907066 19907122 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 3; exon_id "ENSE00003573028.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5078 chr22 ENSEMBL CDS 19907066 19907122 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 3; exon_id "ENSE00003573028.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5079 chr22 ENSEMBL exon 19906383 19906527 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 4; exon_id "ENSE00003631820.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5080 chr22 ENSEMBL CDS 19906383 19906527 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 4; exon_id "ENSE00003631820.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5081 chr22 ENSEMBL exon 19905666 19905740 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 5; exon_id "ENSE00003664003.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5082 chr22 ENSEMBL CDS 19905666 19905740 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 5; exon_id "ENSE00003664003.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5083 chr22 ENSEMBL exon 19903288 19903366 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 6; exon_id "ENSE00003641779.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5084 chr22 ENSEMBL CDS 19903288 19903366 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 6; exon_id "ENSE00003641779.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5085 chr22 ENSEMBL exon 19902737 19902799 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 7; exon_id "ENSE00003541647.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5086 chr22 ENSEMBL CDS 19902737 19902799 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 7; exon_id "ENSE00003541647.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5087 chr22 ENSEMBL exon 19898900 19898970 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 8; exon_id "ENSE00003584986.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5088 chr22 ENSEMBL CDS 19898900 19898970 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 8; exon_id "ENSE00003584986.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5089 chr22 ENSEMBL exon 19886572 19886591 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 9; exon_id "ENSE00003654204.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5090 chr22 ENSEMBL CDS 19886572 19886591 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 9; exon_id "ENSE00003654204.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5091 chr22 ENSEMBL exon 19885562 19885653 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 10; exon_id "ENSE00003520397.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5092 chr22 ENSEMBL CDS 19885562 19885653 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 10; exon_id "ENSE00003520397.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5093 chr22 ENSEMBL exon 19882930 19883104 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 11; exon_id "ENSE00003675318.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5094 chr22 ENSEMBL CDS 19882930 19883104 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 11; exon_id "ENSE00003675318.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5095 chr22 ENSEMBL exon 19870848 19870984 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 12; exon_id "ENSE00003598419.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5096 chr22 ENSEMBL CDS 19870848 19870984 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 12; exon_id "ENSE00003598419.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5097 chr22 ENSEMBL exon 19868145 19868240 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 13; exon_id "ENSE00003517747.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5098 chr22 ENSEMBL CDS 19868145 19868240 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 13; exon_id "ENSE00003517747.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5099 chr22 ENSEMBL exon 19867702 19867794 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 14; exon_id "ENSE00003487823.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5100 chr22 ENSEMBL CDS 19867702 19867794 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 14; exon_id "ENSE00003487823.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5101 chr22 ENSEMBL exon 19865889 19865960 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 15; exon_id "ENSE00003678714.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5102 chr22 ENSEMBL CDS 19865889 19865960 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 15; exon_id "ENSE00003678714.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5103 chr22 ENSEMBL exon 19865613 19865710 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 16; exon_id "ENSE00003504118.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5104 chr22 ENSEMBL CDS 19865613 19865710 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 16; exon_id "ENSE00003504118.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5105 chr22 ENSEMBL exon 19864563 19864757 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 17; exon_id "ENSE00003554198.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5106 chr22 ENSEMBL CDS 19864637 19864757 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 17; exon_id "ENSE00003554198.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5107 chr22 ENSEMBL stop_codon 19864634 19864636 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 17; exon_id "ENSE00003554198.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5108 chr22 ENSEMBL exon 19863126 19863330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; exon_number 18; exon_id "ENSE00002259415.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5109 chr22 ENSEMBL UTR 19919893 19919951 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5110 chr22 ENSEMBL UTR 19864563 19864636 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5111 chr22 ENSEMBL UTR 19863126 19863330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000542719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-203"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5112 chr22 HAVANA transcript 19863164 19868687 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000485358.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-018"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314927.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5113 chr22 HAVANA exon 19868559 19868687 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000485358.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-018"; exon_number 1; exon_id "ENSE00001857145.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314927.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5114 chr22 HAVANA exon 19868145 19868240 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000485358.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-018"; exon_number 2; exon_id "ENSE00003466045.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314927.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5115 chr22 HAVANA exon 19867702 19867794 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000485358.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-018"; exon_number 3; exon_id "ENSE00003548707.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314927.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5116 chr22 HAVANA exon 19865889 19865960 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000485358.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-018"; exon_number 4; exon_id "ENSE00003643650.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314927.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5117 chr22 HAVANA exon 19865613 19865710 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000485358.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-018"; exon_number 5; exon_id "ENSE00003505935.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314927.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5118 chr22 HAVANA exon 19864563 19864757 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000485358.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-018"; exon_number 6; exon_id "ENSE00003491441.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314927.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5119 chr22 HAVANA exon 19863164 19863330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000485358.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-018"; exon_number 7; exon_id "ENSE00001889166.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314927.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5120 chr22 HAVANA transcript 19863215 19868677 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-019"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314928.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5121 chr22 HAVANA exon 19868559 19868677 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-019"; exon_number 1; exon_id "ENSE00001878193.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314928.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5122 chr22 HAVANA exon 19868379 19868468 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-019"; exon_number 2; exon_id "ENSE00001815178.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314928.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5123 chr22 HAVANA exon 19868145 19868240 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-019"; exon_number 3; exon_id "ENSE00003466045.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314928.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5124 chr22 HAVANA exon 19867702 19867794 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-019"; exon_number 4; exon_id "ENSE00003548707.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314928.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5125 chr22 HAVANA exon 19865889 19865960 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-019"; exon_number 5; exon_id "ENSE00003643650.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314928.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5126 chr22 HAVANA exon 19865613 19865710 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-019"; exon_number 6; exon_id "ENSE00003505935.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314928.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5127 chr22 HAVANA exon 19864632 19864757 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-019"; exon_number 7; exon_id "ENSE00001863041.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314928.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5128 chr22 HAVANA exon 19863215 19863330 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000462843.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-019"; exon_number 8; exon_id "ENSE00001882022.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314928.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5129 chr22 ENSEMBL transcript 19881781 19929327 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5130 chr22 ENSEMBL exon 19929224 19929327 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 1; exon_id "ENSE00002313984.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5131 chr22 ENSEMBL CDS 19929224 19929326 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 1; exon_id "ENSE00002313984.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5132 chr22 ENSEMBL start_codon 19929324 19929326 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 1; exon_id "ENSE00002313984.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5133 chr22 ENSEMBL exon 19918553 19918621 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 2; exon_id "ENSE00003692416.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5134 chr22 ENSEMBL CDS 19918553 19918621 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 2; exon_id "ENSE00003692416.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5135 chr22 ENSEMBL exon 19907066 19907122 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 3; exon_id "ENSE00003573028.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5136 chr22 ENSEMBL CDS 19907066 19907122 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 3; exon_id "ENSE00003573028.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5137 chr22 ENSEMBL exon 19906383 19906527 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 4; exon_id "ENSE00003631820.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5138 chr22 ENSEMBL CDS 19906383 19906527 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 4; exon_id "ENSE00003631820.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5139 chr22 ENSEMBL exon 19905666 19905740 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 5; exon_id "ENSE00003664003.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5140 chr22 ENSEMBL CDS 19905666 19905740 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 5; exon_id "ENSE00003664003.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5141 chr22 ENSEMBL exon 19903288 19903366 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 6; exon_id "ENSE00003641779.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5142 chr22 ENSEMBL CDS 19903288 19903366 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 6; exon_id "ENSE00003641779.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5143 chr22 ENSEMBL exon 19902737 19902799 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 7; exon_id "ENSE00003541647.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5144 chr22 ENSEMBL CDS 19902737 19902799 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 7; exon_id "ENSE00003541647.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5145 chr22 ENSEMBL exon 19898900 19898970 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 8; exon_id "ENSE00003584986.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5146 chr22 ENSEMBL CDS 19898900 19898970 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 8; exon_id "ENSE00003584986.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5147 chr22 ENSEMBL exon 19886572 19886591 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 9; exon_id "ENSE00003654204.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5148 chr22 ENSEMBL CDS 19886572 19886591 . - 1 gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 9; exon_id "ENSE00003654204.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5149 chr22 ENSEMBL exon 19885562 19885653 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 10; exon_id "ENSE00003520397.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5150 chr22 ENSEMBL CDS 19885562 19885653 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 10; exon_id "ENSE00003520397.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5151 chr22 ENSEMBL exon 19882930 19883104 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 11; exon_id "ENSE00003675318.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5152 chr22 ENSEMBL CDS 19882930 19883104 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 11; exon_id "ENSE00003675318.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5153 chr22 ENSEMBL exon 19881781 19882723 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 12; exon_id "ENSE00001494457.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5154 chr22 ENSEMBL CDS 19882659 19882723 . - 2 gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 12; exon_id "ENSE00001494457.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5155 chr22 ENSEMBL stop_codon 19882656 19882658 . - 0 gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; exon_number 12; exon_id "ENSE00001494457.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5156 chr22 ENSEMBL UTR 19929327 19929327 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5157 chr22 ENSEMBL UTR 19881781 19882658 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000334363.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TXNRD2-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000149975.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5158 chr22 HAVANA transcript 19881783 19921049 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000491939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314905.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5159 chr22 HAVANA exon 19920957 19921049 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000491939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-005"; exon_number 1; exon_id "ENSE00001830271.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314905.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5160 chr22 HAVANA exon 19918553 19918621 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000491939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-005"; exon_number 2; exon_id "ENSE00003504963.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314905.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5161 chr22 HAVANA exon 19907066 19907122 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000491939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-005"; exon_number 3; exon_id "ENSE00003631534.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314905.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5162 chr22 HAVANA exon 19906383 19906527 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000491939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-005"; exon_number 4; exon_id "ENSE00003494645.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314905.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5163 chr22 HAVANA exon 19905666 19905740 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000491939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-005"; exon_number 5; exon_id "ENSE00003558571.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314905.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5164 chr22 HAVANA exon 19903288 19903366 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000491939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-005"; exon_number 6; exon_id "ENSE00003647979.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314905.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5165 chr22 HAVANA exon 19902737 19902799 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000491939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-005"; exon_number 7; exon_id "ENSE00003630202.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314905.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5166 chr22 HAVANA exon 19898900 19898970 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000491939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-005"; exon_number 8; exon_id "ENSE00003650062.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314905.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5167 chr22 HAVANA exon 19886572 19886591 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000491939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-005"; exon_number 9; exon_id "ENSE00003603192.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314905.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5168 chr22 HAVANA exon 19885562 19885653 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000491939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-005"; exon_number 10; exon_id "ENSE00003529952.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314905.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5169 chr22 HAVANA exon 19882930 19883104 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000491939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-005"; exon_number 11; exon_id "ENSE00003570104.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314905.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5170 chr22 HAVANA exon 19881783 19882723 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000491939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TXNRD2-005"; exon_number 12; exon_id "ENSE00001953860.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314905.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5171 chr22 HAVANA transcript 19882539 19885653 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000475995.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TXNRD2-016"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314925.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5172 chr22 HAVANA exon 19885562 19885653 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000475995.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TXNRD2-016"; exon_number 1; exon_id "ENSE00003529952.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314925.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5173 chr22 HAVANA exon 19882930 19883104 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000475995.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TXNRD2-016"; exon_number 2; exon_id "ENSE00003570104.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314925.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5174 chr22 HAVANA exon 19882539 19882843 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000475995.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TXNRD2-016"; exon_number 3; exon_id "ENSE00001923082.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314925.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5175 chr22 HAVANA transcript 19898458 19905744 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000484672.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TXNRD2-015"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314924.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5176 chr22 HAVANA exon 19905666 19905744 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000484672.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TXNRD2-015"; exon_number 1; exon_id "ENSE00001880716.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314924.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5177 chr22 HAVANA exon 19903288 19903366 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000484672.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TXNRD2-015"; exon_number 2; exon_id "ENSE00003647979.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314924.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5178 chr22 HAVANA exon 19902737 19902799 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000484672.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TXNRD2-015"; exon_number 3; exon_id "ENSE00003630202.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314924.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5179 chr22 HAVANA exon 19898900 19898970 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000484672.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TXNRD2-015"; exon_number 4; exon_id "ENSE00003650062.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314924.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5180 chr22 HAVANA exon 19898458 19898594 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000484672.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TXNRD2-015"; exon_number 5; exon_id "ENSE00001914157.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314924.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5181 chr22 HAVANA transcript 19898781 19903360 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000471835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-014"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314923.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5182 chr22 HAVANA exon 19903288 19903360 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000471835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-014"; exon_number 1; exon_id "ENSE00001918243.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314923.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5183 chr22 HAVANA exon 19902737 19902799 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000471835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-014"; exon_number 2; exon_id "ENSE00003630202.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314923.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5184 chr22 HAVANA exon 19898781 19898970 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000471835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-014"; exon_number 3; exon_id "ENSE00001893236.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314923.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5185 chr22 HAVANA transcript 19902423 19929331 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000496729.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-013"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314922.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5186 chr22 HAVANA exon 19929224 19929331 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000496729.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-013"; exon_number 1; exon_id "ENSE00002277751.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314922.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5187 chr22 HAVANA exon 19918553 19918621 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000496729.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-013"; exon_number 2; exon_id "ENSE00003504963.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314922.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5188 chr22 HAVANA exon 19907066 19907122 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000496729.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-013"; exon_number 3; exon_id "ENSE00003631534.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314922.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5189 chr22 HAVANA exon 19906383 19906527 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000496729.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-013"; exon_number 4; exon_id "ENSE00003494645.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314922.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5190 chr22 HAVANA exon 19905666 19905740 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000496729.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-013"; exon_number 5; exon_id "ENSE00003558571.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314922.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5191 chr22 HAVANA exon 19903288 19903366 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000496729.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-013"; exon_number 6; exon_id "ENSE00003647979.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314922.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5192 chr22 HAVANA exon 19902423 19902799 . - . gene_id "ENSG00000184470.15"; transcript_id "ENST00000496729.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TXNRD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TXNRD2-013"; exon_number 7; exon_id "ENSE00001819069.1"; level 2; havana_gene "OTTHUMG00000149975.4"; havana_transcript "OTTHUMT00000314922.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5193 chr22 HAVANA gene 19874812 19875493 . + . gene_id "ENSG00000232926.1"; transcript_id "ENSG00000232926.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000078.5"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC000078.5"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150619.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5194 chr22 HAVANA transcript 19874812 19875493 . + . gene_id "ENSG00000232926.1"; transcript_id "ENST00000420617.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000078.5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC000078.5-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150619.2"; havana_transcript "OTTHUMT00000319094.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5195 chr22 HAVANA exon 19874812 19875493 . + . gene_id "ENSG00000232926.1"; transcript_id "ENST00000420617.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC000078.5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC000078.5-001"; exon_number 1; exon_id "ENSE00001659682.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150619.2"; havana_transcript "OTTHUMT00000319094.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5196 chr22 HAVANA gene 19929130 19957498 . + . gene_id "ENSG00000093010.7"; transcript_id "ENSG00000093010.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT"; level 1; tag "ncRNA_host"; havana_gene "OTTHUMG00000150529.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5197 chr22 HAVANA transcript 19929130 19957498 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5198 chr22 HAVANA exon 19929130 19929420 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; exon_number 1; exon_id "ENSE00001871649.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5199 chr22 HAVANA exon 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; exon_number 2; exon_id "ENSE00001056469.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5200 chr22 HAVANA exon 19950050 19950338 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5201 chr22 HAVANA CDS 19950050 19950338 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5202 chr22 HAVANA start_codon 19950050 19950052 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5203 chr22 HAVANA exon 19951089 19951282 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; exon_number 4; exon_id "ENSE00003569391.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5204 chr22 HAVANA CDS 19951089 19951282 . + 2 gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; exon_number 4; exon_id "ENSE00003569391.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5205 chr22 HAVANA exon 19951691 19951822 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; exon_number 5; exon_id "ENSE00001316383.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5206 chr22 HAVANA CDS 19951691 19951822 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; exon_number 5; exon_id "ENSE00001316383.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5207 chr22 HAVANA exon 19956059 19957498 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; exon_number 6; exon_id "ENSE00001297813.6"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5208 chr22 HAVANA CDS 19956059 19956256 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; exon_number 6; exon_id "ENSE00001297813.6"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5209 chr22 HAVANA stop_codon 19956257 19956259 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; exon_number 6; exon_id "ENSE00001297813.6"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5210 chr22 HAVANA UTR 19929130 19929420 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5211 chr22 HAVANA UTR 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5212 chr22 HAVANA UTR 19956257 19957498 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000361682.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-011"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318936.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5213 chr22 HAVANA transcript 19929256 19953168 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5214 chr22 HAVANA exon 19929256 19929420 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-004"; exon_number 1; exon_id "ENSE00001557620.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5215 chr22 HAVANA exon 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-004"; exon_number 2; exon_id "ENSE00001056469.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5216 chr22 HAVANA exon 19950050 19950338 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-004"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5217 chr22 HAVANA CDS 19950050 19950338 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000403184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-004"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5218 chr22 HAVANA start_codon 19950050 19950052 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000403184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-004"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5219 chr22 HAVANA exon 19951089 19951282 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-004"; exon_number 4; exon_id "ENSE00003569391.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5220 chr22 HAVANA CDS 19951089 19951282 . + 2 gene_id "ENSG00000093010.7"; transcript_id "ENST00000403184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-004"; exon_number 4; exon_id "ENSE00003569391.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5221 chr22 HAVANA exon 19951691 19953168 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-004"; exon_number 5; exon_id "ENSE00001554634.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5222 chr22 HAVANA CDS 19951691 19951912 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000403184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-004"; exon_number 5; exon_id "ENSE00001554634.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5223 chr22 HAVANA stop_codon 19951913 19951915 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000403184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-004"; exon_number 5; exon_id "ENSE00001554634.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5224 chr22 HAVANA UTR 19929256 19929420 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5225 chr22 HAVANA UTR 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5226 chr22 HAVANA UTR 19951913 19953168 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5227 chr22 HAVANA transcript 19929296 19956481 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5228 chr22 HAVANA exon 19929296 19929420 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; exon_number 1; exon_id "ENSE00001563234.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5229 chr22 HAVANA exon 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; exon_number 2; exon_id "ENSE00001056469.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5230 chr22 HAVANA exon 19949756 19950338 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; exon_number 3; exon_id "ENSE00001561154.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5231 chr22 HAVANA CDS 19950050 19950338 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; exon_number 3; exon_id "ENSE00001561154.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5232 chr22 HAVANA start_codon 19950050 19950052 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; exon_number 3; exon_id "ENSE00001561154.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5233 chr22 HAVANA exon 19951089 19951282 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; exon_number 4; exon_id "ENSE00003569391.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5234 chr22 HAVANA CDS 19951089 19951282 . + 2 gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; exon_number 4; exon_id "ENSE00003569391.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5235 chr22 HAVANA exon 19951691 19951822 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; exon_number 5; exon_id "ENSE00001316383.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5236 chr22 HAVANA CDS 19951691 19951822 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; exon_number 5; exon_id "ENSE00001316383.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5237 chr22 HAVANA exon 19956059 19956481 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; exon_number 6; exon_id "ENSE00001556353.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5238 chr22 HAVANA CDS 19956059 19956256 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; exon_number 6; exon_id "ENSE00001556353.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5239 chr22 HAVANA stop_codon 19956257 19956259 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; exon_number 6; exon_id "ENSE00001556353.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5240 chr22 HAVANA UTR 19929296 19929420 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5241 chr22 HAVANA UTR 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5242 chr22 HAVANA UTR 19949756 19950049 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5243 chr22 HAVANA UTR 19956257 19956481 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000403710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318771.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5244 chr22 HAVANA transcript 19929311 19956521 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5245 chr22 HAVANA exon 19929311 19929420 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; exon_number 1; exon_id "ENSE00001556079.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5246 chr22 HAVANA exon 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; exon_number 2; exon_id "ENSE00001056469.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5247 chr22 HAVANA exon 19949220 19949397 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; exon_number 3; exon_id "ENSE00001563393.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5248 chr22 HAVANA exon 19950050 19950338 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; exon_number 4; exon_id "ENSE00001656924.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5249 chr22 HAVANA CDS 19950200 19950338 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; exon_number 4; exon_id "ENSE00001656924.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5250 chr22 HAVANA start_codon 19950200 19950202 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; exon_number 4; exon_id "ENSE00001656924.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5251 chr22 HAVANA exon 19951089 19951282 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; exon_number 5; exon_id "ENSE00003569391.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5252 chr22 HAVANA CDS 19951089 19951282 . + 2 gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; exon_number 5; exon_id "ENSE00003569391.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5253 chr22 HAVANA exon 19951691 19951822 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; exon_number 6; exon_id "ENSE00001316383.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5254 chr22 HAVANA CDS 19951691 19951822 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; exon_number 6; exon_id "ENSE00001316383.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5255 chr22 HAVANA exon 19956059 19956521 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; exon_number 7; exon_id "ENSE00001556279.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5256 chr22 HAVANA CDS 19956059 19956256 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; exon_number 7; exon_id "ENSE00001556279.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5257 chr22 HAVANA stop_codon 19956257 19956259 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; exon_number 7; exon_id "ENSE00001556279.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5258 chr22 HAVANA UTR 19929311 19929420 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5259 chr22 HAVANA UTR 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5260 chr22 HAVANA UTR 19949220 19949397 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5261 chr22 HAVANA UTR 19950050 19950199 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5262 chr22 HAVANA UTR 19956257 19956521 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000407537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318772.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5263 chr22 HAVANA transcript 19929316 19950399 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000467943.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "COMT-009"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318852.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5264 chr22 HAVANA exon 19929316 19929420 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000467943.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "COMT-009"; exon_number 1; exon_id "ENSE00001056468.5"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318852.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5265 chr22 HAVANA exon 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000467943.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "COMT-009"; exon_number 2; exon_id "ENSE00001056469.1"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318852.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5266 chr22 HAVANA exon 19950050 19950399 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000467943.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "COMT-009"; exon_number 3; exon_id "ENSE00001885679.1"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318852.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5267 chr22 HAVANA transcript 19938465 19956112 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000412786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000319736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5268 chr22 HAVANA exon 19938465 19938575 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000412786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-005"; exon_number 1; exon_id "ENSE00001697774.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000319736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5269 chr22 HAVANA exon 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000412786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-005"; exon_number 2; exon_id "ENSE00001056469.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000319736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5270 chr22 HAVANA exon 19950050 19950338 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000412786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-005"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000319736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5271 chr22 HAVANA CDS 19950050 19950338 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000412786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-005"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000319736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5272 chr22 HAVANA start_codon 19950050 19950052 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000412786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-005"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000319736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5273 chr22 HAVANA exon 19951089 19951282 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000412786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-005"; exon_number 4; exon_id "ENSE00003569391.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000319736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5274 chr22 HAVANA CDS 19951089 19951282 . + 2 gene_id "ENSG00000093010.7"; transcript_id "ENST00000412786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-005"; exon_number 4; exon_id "ENSE00003569391.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000319736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5275 chr22 HAVANA exon 19951691 19951822 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000412786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-005"; exon_number 5; exon_id "ENSE00001316383.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000319736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5276 chr22 HAVANA CDS 19951691 19951822 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000412786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-005"; exon_number 5; exon_id "ENSE00001316383.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000319736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5277 chr22 HAVANA exon 19956059 19956112 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000412786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-005"; exon_number 6; exon_id "ENSE00001639604.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000319736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5278 chr22 HAVANA CDS 19956059 19956112 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000412786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-005"; exon_number 6; exon_id "ENSE00001639604.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000319736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5279 chr22 HAVANA UTR 19938465 19938575 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000412786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000319736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5280 chr22 HAVANA UTR 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000412786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000319736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5281 chr22 HAVANA transcript 19938502 19956539 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5282 chr22 HAVANA exon 19938502 19938575 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; exon_number 1; exon_id "ENSE00001628490.1"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5283 chr22 HAVANA exon 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; exon_number 2; exon_id "ENSE00001056469.1"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5284 chr22 HAVANA exon 19950050 19950338 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5285 chr22 HAVANA CDS 19950050 19950338 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5286 chr22 HAVANA start_codon 19950050 19950052 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5287 chr22 HAVANA exon 19951089 19951282 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; exon_number 4; exon_id "ENSE00003569391.1"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5288 chr22 HAVANA CDS 19951089 19951282 . + 2 gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; exon_number 4; exon_id "ENSE00003569391.1"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5289 chr22 HAVANA exon 19951633 19951822 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; exon_number 5; exon_id "ENSE00001746478.1"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5290 chr22 HAVANA CDS 19951633 19951746 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; exon_number 5; exon_id "ENSE00001746478.1"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5291 chr22 HAVANA stop_codon 19951747 19951749 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; exon_number 5; exon_id "ENSE00001746478.1"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5292 chr22 HAVANA exon 19956059 19956539 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; exon_number 6; exon_id "ENSE00003648907.1"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5293 chr22 HAVANA UTR 19938502 19938575 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5294 chr22 HAVANA UTR 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5295 chr22 HAVANA UTR 19951747 19951822 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5296 chr22 HAVANA UTR 19956059 19956539 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000207636.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "COMT-007"; level 2; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318850.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5297 chr22 HAVANA transcript 19939026 19956539 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5298 chr22 HAVANA exon 19939026 19939177 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; exon_number 1; exon_id "ENSE00001562401.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5299 chr22 HAVANA exon 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; exon_number 2; exon_id "ENSE00001056469.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5300 chr22 HAVANA exon 19950050 19950338 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5301 chr22 HAVANA CDS 19950050 19950338 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5302 chr22 HAVANA start_codon 19950050 19950052 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; exon_number 3; exon_id "ENSE00001656924.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5303 chr22 HAVANA exon 19951089 19951282 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; exon_number 4; exon_id "ENSE00003569391.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5304 chr22 HAVANA CDS 19951089 19951282 . + 2 gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; exon_number 4; exon_id "ENSE00003569391.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5305 chr22 HAVANA exon 19951691 19951822 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; exon_number 5; exon_id "ENSE00001316383.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5306 chr22 HAVANA CDS 19951691 19951822 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; exon_number 5; exon_id "ENSE00001316383.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5307 chr22 HAVANA exon 19956059 19956539 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; exon_number 6; exon_id "ENSE00003489638.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5308 chr22 HAVANA CDS 19956059 19956256 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; exon_number 6; exon_id "ENSE00003489638.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5309 chr22 HAVANA stop_codon 19956257 19956259 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; exon_number 6; exon_id "ENSE00003489638.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5310 chr22 HAVANA UTR 19939026 19939177 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5311 chr22 HAVANA UTR 19948722 19948812 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5312 chr22 HAVANA UTR 19956257 19956539 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000406520.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13770.1"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318770.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5313 chr22 ENSEMBL transcript 19950070 19957498 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000449653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-201"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5314 chr22 ENSEMBL exon 19950070 19950338 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000449653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-201"; exon_number 1; exon_id "ENSE00001618181.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5315 chr22 ENSEMBL CDS 19950200 19950338 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000449653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-201"; exon_number 1; exon_id "ENSE00001618181.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5316 chr22 ENSEMBL start_codon 19950200 19950202 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000449653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-201"; exon_number 1; exon_id "ENSE00001618181.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5317 chr22 ENSEMBL exon 19951089 19951282 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000449653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-201"; exon_number 2; exon_id "ENSE00003569391.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5318 chr22 ENSEMBL CDS 19951089 19951282 . + 2 gene_id "ENSG00000093010.7"; transcript_id "ENST00000449653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-201"; exon_number 2; exon_id "ENSE00003569391.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5319 chr22 ENSEMBL exon 19951691 19951822 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000449653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-201"; exon_number 3; exon_id "ENSE00001316383.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5320 chr22 ENSEMBL CDS 19951691 19951822 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000449653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-201"; exon_number 3; exon_id "ENSE00001316383.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5321 chr22 ENSEMBL exon 19956059 19957498 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000449653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-201"; exon_number 4; exon_id "ENSE00001297813.6"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5322 chr22 ENSEMBL CDS 19956059 19956256 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000449653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-201"; exon_number 4; exon_id "ENSE00001297813.6"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5323 chr22 ENSEMBL stop_codon 19956257 19956259 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000449653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-201"; exon_number 4; exon_id "ENSE00001297813.6"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5324 chr22 ENSEMBL UTR 19950070 19950199 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000449653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-201"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5325 chr22 ENSEMBL UTR 19956257 19957498 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000449653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COMT-201"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46663.1"; havana_gene "OTTHUMG00000150529.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5326 chr22 HAVANA transcript 19950868 19951823 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000493893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "COMT-010"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318853.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5327 chr22 HAVANA exon 19950868 19950894 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000493893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "COMT-010"; exon_number 1; exon_id "ENSE00001907417.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318853.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5328 chr22 HAVANA exon 19951089 19951282 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000493893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "COMT-010"; exon_number 2; exon_id "ENSE00003665046.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318853.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5329 chr22 HAVANA exon 19951691 19951823 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000493893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "COMT-010"; exon_number 3; exon_id "ENSE00001901158.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318853.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5330 chr22 HAVANA transcript 19951222 19955217 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000428707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-008"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318851.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5331 chr22 HAVANA exon 19951222 19951282 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000428707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-008"; exon_number 1; exon_id "ENSE00001757005.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318851.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5332 chr22 HAVANA CDS 19951222 19951282 . + 1 gene_id "ENSG00000093010.7"; transcript_id "ENST00000428707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-008"; exon_number 1; exon_id "ENSE00001757005.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318851.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5333 chr22 HAVANA exon 19951691 19951822 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000428707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-008"; exon_number 2; exon_id "ENSE00001316383.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318851.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5334 chr22 HAVANA CDS 19951691 19951822 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000428707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-008"; exon_number 2; exon_id "ENSE00001316383.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318851.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5335 chr22 HAVANA exon 19954687 19955217 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000428707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-008"; exon_number 3; exon_id "ENSE00001640618.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318851.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5336 chr22 HAVANA CDS 19954687 19954947 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000428707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-008"; exon_number 3; exon_id "ENSE00001640618.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318851.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5337 chr22 HAVANA stop_codon 19954948 19954950 . + 0 gene_id "ENSG00000093010.7"; transcript_id "ENST00000428707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-008"; exon_number 3; exon_id "ENSE00001640618.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318851.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5338 chr22 HAVANA UTR 19954948 19955217 . + . gene_id "ENSG00000093010.7"; transcript_id "ENST00000428707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COMT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COMT-008"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150529.6"; havana_transcript "OTTHUMT00000318851.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5339 chr22 ENSEMBL gene 19951276 19951357 . + . gene_id "ENSG00000265087.1"; transcript_id "ENSG00000265087.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR4761"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR4761"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5340 chr22 ENSEMBL transcript 19951276 19951357 . + . gene_id "ENSG00000265087.1"; transcript_id "ENST00000585066.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR4761"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR4761-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5341 chr22 ENSEMBL exon 19951276 19951357 . + . gene_id "ENSG00000265087.1"; transcript_id "ENST00000585066.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR4761"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR4761-201"; exon_number 1; exon_id "ENSE00002703372.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5342 chr22 HAVANA gene 19957419 20004331 . - . gene_id "ENSG00000099889.9"; transcript_id "ENSG00000099889.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF"; level 1; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5343 chr22 HAVANA transcript 19957419 20004331 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5344 chr22 HAVANA exon 20004112 20004331 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 1; exon_id "ENSE00001927738.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5345 chr22 HAVANA exon 19997978 19998031 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 2; exon_id "ENSE00001305102.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5346 chr22 HAVANA exon 19978108 19978335 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 3; exon_id "ENSE00002308607.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5347 chr22 HAVANA CDS 19978108 19978317 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 3; exon_id "ENSE00002308607.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5348 chr22 HAVANA start_codon 19978315 19978317 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 3; exon_id "ENSE00002308607.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5349 chr22 HAVANA exon 19969456 19969614 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 4; exon_id "ENSE00003482965.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5350 chr22 HAVANA CDS 19969456 19969614 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 4; exon_id "ENSE00003482965.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5351 chr22 HAVANA exon 19968734 19969260 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 5; exon_id "ENSE00001728584.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5352 chr22 HAVANA CDS 19968734 19969260 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 5; exon_id "ENSE00001728584.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5353 chr22 HAVANA exon 19967266 19967765 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 6; exon_id "ENSE00001644901.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5354 chr22 HAVANA CDS 19967266 19967765 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 6; exon_id "ENSE00001644901.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5355 chr22 HAVANA exon 19966420 19966603 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 7; exon_id "ENSE00001759472.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5356 chr22 HAVANA CDS 19966420 19966603 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 7; exon_id "ENSE00001759472.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5357 chr22 HAVANA exon 19965481 19965598 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 8; exon_id "ENSE00003487398.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5358 chr22 HAVANA CDS 19965481 19965598 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 8; exon_id "ENSE00003487398.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5359 chr22 HAVANA exon 19964938 19965109 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 9; exon_id "ENSE00003471476.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5360 chr22 HAVANA CDS 19964938 19965109 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 9; exon_id "ENSE00003471476.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5361 chr22 HAVANA exon 19964229 19964246 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 10; exon_id "ENSE00001766679.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5362 chr22 HAVANA CDS 19964229 19964246 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 10; exon_id "ENSE00001766679.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5363 chr22 HAVANA exon 19963209 19963280 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 11; exon_id "ENSE00003678473.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5364 chr22 HAVANA CDS 19963209 19963280 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 11; exon_id "ENSE00003678473.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5365 chr22 HAVANA exon 19961635 19961762 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 12; exon_id "ENSE00003688873.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5366 chr22 HAVANA CDS 19961635 19961762 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 12; exon_id "ENSE00003688873.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5367 chr22 HAVANA exon 19961166 19961316 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 13; exon_id "ENSE00003459452.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5368 chr22 HAVANA CDS 19961166 19961316 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 13; exon_id "ENSE00003459452.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5369 chr22 HAVANA exon 19960642 19960840 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 14; exon_id "ENSE00003636865.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5370 chr22 HAVANA CDS 19960642 19960840 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 14; exon_id "ENSE00003636865.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5371 chr22 HAVANA exon 19960448 19960559 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 15; exon_id "ENSE00003552716.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5372 chr22 HAVANA CDS 19960448 19960559 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 15; exon_id "ENSE00003552716.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5373 chr22 HAVANA exon 19960260 19960350 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 16; exon_id "ENSE00003578295.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5374 chr22 HAVANA CDS 19960260 19960350 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 16; exon_id "ENSE00003578295.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5375 chr22 HAVANA exon 19959881 19959934 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 17; exon_id "ENSE00003525882.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5376 chr22 HAVANA CDS 19959881 19959934 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 17; exon_id "ENSE00003525882.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5377 chr22 HAVANA exon 19959409 19959494 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 18; exon_id "ENSE00003638782.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5378 chr22 HAVANA CDS 19959409 19959494 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 18; exon_id "ENSE00003638782.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5379 chr22 HAVANA exon 19958739 19958858 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 19; exon_id "ENSE00001305650.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5380 chr22 HAVANA CDS 19958754 19958858 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 19; exon_id "ENSE00001305650.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5381 chr22 HAVANA stop_codon 19958751 19958753 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 19; exon_id "ENSE00001305650.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5382 chr22 HAVANA exon 19957419 19958266 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; exon_number 20; exon_id "ENSE00001881837.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5383 chr22 HAVANA UTR 20004112 20004331 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5384 chr22 HAVANA UTR 19997978 19998031 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5385 chr22 HAVANA UTR 19978318 19978335 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5386 chr22 HAVANA UTR 19958739 19958753 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5387 chr22 HAVANA UTR 19957419 19958266 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000263207.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000075314.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5388 chr22 HAVANA transcript 19957421 19966939 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000495096.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-002"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318878.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5389 chr22 HAVANA exon 19966420 19966939 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000495096.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-002"; exon_number 1; exon_id "ENSE00001887833.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318878.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5390 chr22 HAVANA exon 19965481 19965598 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000495096.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-002"; exon_number 2; exon_id "ENSE00003481526.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318878.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5391 chr22 HAVANA exon 19964938 19965109 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000495096.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-002"; exon_number 3; exon_id "ENSE00003643716.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318878.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5392 chr22 HAVANA exon 19963209 19963280 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000495096.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-002"; exon_number 4; exon_id "ENSE00003613415.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318878.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5393 chr22 HAVANA exon 19961635 19961762 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000495096.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-002"; exon_number 5; exon_id "ENSE00003481834.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318878.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5394 chr22 HAVANA exon 19961166 19961316 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000495096.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-002"; exon_number 6; exon_id "ENSE00003593979.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318878.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5395 chr22 HAVANA exon 19960642 19960840 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000495096.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-002"; exon_number 7; exon_id "ENSE00003538882.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318878.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5396 chr22 HAVANA exon 19960448 19960559 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000495096.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-002"; exon_number 8; exon_id "ENSE00003676679.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318878.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5397 chr22 HAVANA exon 19960260 19960350 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000495096.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-002"; exon_number 9; exon_id "ENSE00003663363.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318878.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5398 chr22 HAVANA exon 19959881 19959934 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000495096.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-002"; exon_number 10; exon_id "ENSE00003477227.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318878.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5399 chr22 HAVANA exon 19959409 19959494 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000495096.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-002"; exon_number 11; exon_id "ENSE00003643305.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318878.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5400 chr22 HAVANA exon 19957421 19958266 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000495096.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-002"; exon_number 12; exon_id "ENSE00001676342.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318878.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5401 chr22 ENSEMBL transcript 19957421 19974616 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5402 chr22 ENSEMBL exon 19974596 19974616 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 1; exon_id "ENSE00001399484.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5403 chr22 ENSEMBL CDS 19974596 19974616 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 1; exon_id "ENSE00001399484.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5404 chr22 ENSEMBL start_codon 19974614 19974616 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 1; exon_id "ENSE00001399484.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5405 chr22 ENSEMBL exon 19969456 19969614 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 2; exon_id "ENSE00003482965.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5406 chr22 ENSEMBL CDS 19969456 19969614 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 2; exon_id "ENSE00003482965.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5407 chr22 ENSEMBL exon 19968734 19969260 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 3; exon_id "ENSE00001728584.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5408 chr22 ENSEMBL CDS 19968734 19969260 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 3; exon_id "ENSE00001728584.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5409 chr22 ENSEMBL exon 19967266 19967765 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 4; exon_id "ENSE00001644901.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5410 chr22 ENSEMBL CDS 19967266 19967765 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 4; exon_id "ENSE00001644901.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5411 chr22 ENSEMBL exon 19966420 19966603 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 5; exon_id "ENSE00001759472.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5412 chr22 ENSEMBL CDS 19966420 19966603 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 5; exon_id "ENSE00001759472.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5413 chr22 ENSEMBL exon 19965481 19965598 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 6; exon_id "ENSE00003487398.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5414 chr22 ENSEMBL CDS 19965481 19965598 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 6; exon_id "ENSE00003487398.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5415 chr22 ENSEMBL exon 19964938 19965109 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 7; exon_id "ENSE00003471476.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5416 chr22 ENSEMBL CDS 19964938 19965109 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 7; exon_id "ENSE00003471476.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5417 chr22 ENSEMBL exon 19964229 19964246 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 8; exon_id "ENSE00001766679.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5418 chr22 ENSEMBL CDS 19964229 19964246 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 8; exon_id "ENSE00001766679.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5419 chr22 ENSEMBL exon 19963209 19963280 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 9; exon_id "ENSE00003678473.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5420 chr22 ENSEMBL CDS 19963209 19963280 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 9; exon_id "ENSE00003678473.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5421 chr22 ENSEMBL exon 19961635 19961762 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 10; exon_id "ENSE00003688873.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5422 chr22 ENSEMBL CDS 19961635 19961762 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 10; exon_id "ENSE00003688873.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5423 chr22 ENSEMBL exon 19961166 19961316 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 11; exon_id "ENSE00003459452.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5424 chr22 ENSEMBL CDS 19961166 19961316 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 11; exon_id "ENSE00003459452.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5425 chr22 ENSEMBL exon 19960642 19960840 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 12; exon_id "ENSE00003636865.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5426 chr22 ENSEMBL CDS 19960642 19960840 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 12; exon_id "ENSE00003636865.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5427 chr22 ENSEMBL exon 19960448 19960559 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 13; exon_id "ENSE00003552716.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5428 chr22 ENSEMBL CDS 19960448 19960559 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 13; exon_id "ENSE00003552716.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5429 chr22 ENSEMBL exon 19960260 19960350 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 14; exon_id "ENSE00003578295.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5430 chr22 ENSEMBL CDS 19960260 19960350 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 14; exon_id "ENSE00003578295.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5431 chr22 ENSEMBL exon 19959881 19959934 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 15; exon_id "ENSE00003525882.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5432 chr22 ENSEMBL CDS 19959881 19959934 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 15; exon_id "ENSE00003525882.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5433 chr22 ENSEMBL exon 19959409 19959494 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 16; exon_id "ENSE00003638782.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5434 chr22 ENSEMBL CDS 19959409 19959494 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 16; exon_id "ENSE00003638782.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5435 chr22 ENSEMBL exon 19958739 19958858 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 17; exon_id "ENSE00001305650.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5436 chr22 ENSEMBL CDS 19958754 19958858 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 17; exon_id "ENSE00001305650.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5437 chr22 ENSEMBL stop_codon 19958751 19958753 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 17; exon_id "ENSE00001305650.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5438 chr22 ENSEMBL exon 19957421 19958266 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; exon_number 18; exon_id "ENSE00001676342.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5439 chr22 ENSEMBL UTR 19958739 19958753 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5440 chr22 ENSEMBL UTR 19957421 19958266 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000344269.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000030426.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5441 chr22 HAVANA transcript 19958751 19974616 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5442 chr22 HAVANA exon 19974596 19974616 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 1; exon_id "ENSE00001399484.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5443 chr22 HAVANA CDS 19974596 19974616 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 1; exon_id "ENSE00001399484.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5444 chr22 HAVANA start_codon 19974614 19974616 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 1; exon_id "ENSE00001399484.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5445 chr22 HAVANA exon 19969456 19969614 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 2; exon_id "ENSE00003482965.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5446 chr22 HAVANA CDS 19969456 19969614 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 2; exon_id "ENSE00003482965.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5447 chr22 HAVANA exon 19968734 19969260 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 3; exon_id "ENSE00001728584.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5448 chr22 HAVANA CDS 19968734 19969260 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 3; exon_id "ENSE00001728584.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5449 chr22 HAVANA exon 19967266 19967765 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 4; exon_id "ENSE00001644901.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5450 chr22 HAVANA CDS 19967266 19967765 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 4; exon_id "ENSE00001644901.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5451 chr22 HAVANA exon 19966420 19966603 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 5; exon_id "ENSE00001759472.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5452 chr22 HAVANA CDS 19966420 19966603 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 5; exon_id "ENSE00001759472.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5453 chr22 HAVANA exon 19965481 19965598 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 6; exon_id "ENSE00003487398.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5454 chr22 HAVANA CDS 19965481 19965598 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 6; exon_id "ENSE00003487398.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5455 chr22 HAVANA exon 19964938 19965109 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 7; exon_id "ENSE00003471476.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5456 chr22 HAVANA CDS 19964938 19965109 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 7; exon_id "ENSE00003471476.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5457 chr22 HAVANA exon 19964229 19964246 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 8; exon_id "ENSE00001766679.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5458 chr22 HAVANA CDS 19964229 19964246 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 8; exon_id "ENSE00001766679.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5459 chr22 HAVANA exon 19963209 19963280 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 9; exon_id "ENSE00003678473.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5460 chr22 HAVANA CDS 19963209 19963280 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 9; exon_id "ENSE00003678473.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5461 chr22 HAVANA exon 19961635 19961762 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 10; exon_id "ENSE00003688873.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5462 chr22 HAVANA CDS 19961635 19961762 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 10; exon_id "ENSE00003688873.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5463 chr22 HAVANA exon 19961166 19961316 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 11; exon_id "ENSE00003459452.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5464 chr22 HAVANA CDS 19961166 19961316 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 11; exon_id "ENSE00003459452.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5465 chr22 HAVANA exon 19960642 19960840 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 12; exon_id "ENSE00003636865.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5466 chr22 HAVANA CDS 19960642 19960840 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 12; exon_id "ENSE00003636865.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5467 chr22 HAVANA exon 19960448 19960559 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 13; exon_id "ENSE00003552716.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5468 chr22 HAVANA CDS 19960448 19960559 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 13; exon_id "ENSE00003552716.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5469 chr22 HAVANA exon 19960260 19960350 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 14; exon_id "ENSE00003578295.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5470 chr22 HAVANA CDS 19960260 19960350 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 14; exon_id "ENSE00003578295.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5471 chr22 HAVANA exon 19959881 19959934 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 15; exon_id "ENSE00003525882.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5472 chr22 HAVANA CDS 19959881 19959934 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 15; exon_id "ENSE00003525882.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5473 chr22 HAVANA exon 19959409 19959494 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 16; exon_id "ENSE00003638782.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5474 chr22 HAVANA CDS 19959409 19959494 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 16; exon_id "ENSE00003638782.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5475 chr22 HAVANA exon 19958751 19958858 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 17; exon_id "ENSE00001548182.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5476 chr22 HAVANA CDS 19958754 19958858 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 17; exon_id "ENSE00001548182.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5477 chr22 HAVANA stop_codon 19958751 19958753 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; exon_number 17; exon_id "ENSE00001548182.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5478 chr22 HAVANA UTR 19958751 19958753 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000401994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-011"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5479 chr22 HAVANA transcript 19958751 19974616 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5480 chr22 HAVANA exon 19974596 19974616 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 1; exon_id "ENSE00001399484.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5481 chr22 HAVANA CDS 19974596 19974616 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 1; exon_id "ENSE00001399484.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5482 chr22 HAVANA start_codon 19974614 19974616 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 1; exon_id "ENSE00001399484.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5483 chr22 HAVANA exon 19969456 19969614 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 2; exon_id "ENSE00003482965.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5484 chr22 HAVANA CDS 19969456 19969614 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 2; exon_id "ENSE00003482965.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5485 chr22 HAVANA exon 19968734 19969260 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 3; exon_id "ENSE00001728584.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5486 chr22 HAVANA CDS 19968734 19969260 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 3; exon_id "ENSE00001728584.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5487 chr22 HAVANA exon 19967266 19967765 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 4; exon_id "ENSE00001644901.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5488 chr22 HAVANA CDS 19967266 19967765 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 4; exon_id "ENSE00001644901.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5489 chr22 HAVANA exon 19966420 19966603 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 5; exon_id "ENSE00001759472.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5490 chr22 HAVANA CDS 19966420 19966603 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 5; exon_id "ENSE00001759472.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5491 chr22 HAVANA exon 19965481 19965598 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 6; exon_id "ENSE00003487398.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5492 chr22 HAVANA CDS 19965481 19965598 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 6; exon_id "ENSE00003487398.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5493 chr22 HAVANA exon 19964938 19965109 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 7; exon_id "ENSE00003471476.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5494 chr22 HAVANA CDS 19964938 19965109 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 7; exon_id "ENSE00003471476.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5495 chr22 HAVANA exon 19963209 19963280 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 8; exon_id "ENSE00003678473.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5496 chr22 HAVANA CDS 19963209 19963280 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 8; exon_id "ENSE00003678473.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5497 chr22 HAVANA exon 19961635 19961762 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 9; exon_id "ENSE00003688873.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5498 chr22 HAVANA CDS 19961635 19961762 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 9; exon_id "ENSE00003688873.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5499 chr22 HAVANA exon 19961166 19961316 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 10; exon_id "ENSE00003459452.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5500 chr22 HAVANA CDS 19961166 19961316 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 10; exon_id "ENSE00003459452.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5501 chr22 HAVANA exon 19960642 19960840 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 11; exon_id "ENSE00003636865.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5502 chr22 HAVANA CDS 19960642 19960840 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 11; exon_id "ENSE00003636865.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5503 chr22 HAVANA exon 19960448 19960559 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 12; exon_id "ENSE00003552716.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5504 chr22 HAVANA CDS 19960448 19960559 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 12; exon_id "ENSE00003552716.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5505 chr22 HAVANA exon 19960260 19960350 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 13; exon_id "ENSE00003578295.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5506 chr22 HAVANA CDS 19960260 19960350 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 13; exon_id "ENSE00003578295.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5507 chr22 HAVANA exon 19959881 19959934 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 14; exon_id "ENSE00003525882.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5508 chr22 HAVANA CDS 19959881 19959934 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 14; exon_id "ENSE00003525882.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5509 chr22 HAVANA exon 19959409 19959494 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 15; exon_id "ENSE00003638782.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5510 chr22 HAVANA CDS 19959409 19959494 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 15; exon_id "ENSE00003638782.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5511 chr22 HAVANA exon 19958751 19958858 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 16; exon_id "ENSE00001548182.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5512 chr22 HAVANA CDS 19958754 19958858 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 16; exon_id "ENSE00001548182.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5513 chr22 HAVANA stop_codon 19958751 19958753 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; exon_number 16; exon_id "ENSE00001548182.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5514 chr22 HAVANA UTR 19958751 19958753 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-012"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319751.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5515 chr22 HAVANA transcript 19958751 19978317 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5516 chr22 HAVANA exon 19978108 19978317 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 1; exon_id "ENSE00001557573.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5517 chr22 HAVANA CDS 19978108 19978317 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 1; exon_id "ENSE00001557573.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5518 chr22 HAVANA start_codon 19978315 19978317 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 1; exon_id "ENSE00001557573.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5519 chr22 HAVANA exon 19969456 19969614 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 2; exon_id "ENSE00003482965.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5520 chr22 HAVANA CDS 19969456 19969614 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 2; exon_id "ENSE00003482965.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5521 chr22 HAVANA exon 19968734 19969260 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 3; exon_id "ENSE00001728584.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5522 chr22 HAVANA CDS 19968734 19969260 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 3; exon_id "ENSE00001728584.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5523 chr22 HAVANA exon 19967266 19967765 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 4; exon_id "ENSE00001644901.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5524 chr22 HAVANA CDS 19967266 19967765 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 4; exon_id "ENSE00001644901.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5525 chr22 HAVANA exon 19966420 19966603 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 5; exon_id "ENSE00001759472.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5526 chr22 HAVANA CDS 19966420 19966603 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 5; exon_id "ENSE00001759472.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5527 chr22 HAVANA exon 19965481 19965598 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 6; exon_id "ENSE00003487398.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5528 chr22 HAVANA CDS 19965481 19965598 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 6; exon_id "ENSE00003487398.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5529 chr22 HAVANA exon 19964938 19965109 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 7; exon_id "ENSE00003471476.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5530 chr22 HAVANA CDS 19964938 19965109 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 7; exon_id "ENSE00003471476.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5531 chr22 HAVANA exon 19963209 19963280 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 8; exon_id "ENSE00003678473.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5532 chr22 HAVANA CDS 19963209 19963280 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 8; exon_id "ENSE00003678473.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5533 chr22 HAVANA exon 19961635 19961762 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 9; exon_id "ENSE00003688873.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5534 chr22 HAVANA CDS 19961635 19961762 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 9; exon_id "ENSE00003688873.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5535 chr22 HAVANA exon 19961166 19961316 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 10; exon_id "ENSE00003459452.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5536 chr22 HAVANA CDS 19961166 19961316 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 10; exon_id "ENSE00003459452.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
5537 chr22 HAVANA exon 19960642 19960840 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 11; exon_id "ENSE00003636865.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
5538 chr22 HAVANA CDS 19960642 19960840 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 11; exon_id "ENSE00003636865.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5539 chr22 HAVANA exon 19960448 19960559 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 12; exon_id "ENSE00003552716.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5540 chr22 HAVANA CDS 19960448 19960559 . - 1 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 12; exon_id "ENSE00003552716.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5541 chr22 HAVANA exon 19960260 19960350 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 13; exon_id "ENSE00003578295.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5542 chr22 HAVANA CDS 19960260 19960350 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 13; exon_id "ENSE00003578295.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5543 chr22 HAVANA exon 19959881 19959934 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 14; exon_id "ENSE00003525882.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5544 chr22 HAVANA CDS 19959881 19959934 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 14; exon_id "ENSE00003525882.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5545 chr22 HAVANA exon 19959409 19959494 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 15; exon_id "ENSE00003638782.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5546 chr22 HAVANA CDS 19959409 19959494 . - 2 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 15; exon_id "ENSE00003638782.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5547 chr22 HAVANA exon 19958751 19958858 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 16; exon_id "ENSE00001548182.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5548 chr22 HAVANA CDS 19958754 19958858 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 16; exon_id "ENSE00001548182.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5549 chr22 HAVANA stop_codon 19958751 19958753 . - 0 gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; exon_number 16; exon_id "ENSE00001548182.1"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5550 chr22 HAVANA UTR 19958751 19958753 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000406259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ARVCF-013"; level 2; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13771.1"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5551 chr22 HAVANA transcript 19960685 19963285 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000480792.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ARVCF-009"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319748.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5552 chr22 HAVANA exon 19963209 19963285 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000480792.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ARVCF-009"; exon_number 1; exon_id "ENSE00001945834.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319748.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5553 chr22 HAVANA exon 19961635 19961801 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000480792.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ARVCF-009"; exon_number 2; exon_id "ENSE00001904951.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319748.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5554 chr22 HAVANA exon 19961166 19961316 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000480792.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ARVCF-009"; exon_number 3; exon_id "ENSE00003593979.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319748.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5555 chr22 HAVANA exon 19960685 19960840 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000480792.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ARVCF-009"; exon_number 4; exon_id "ENSE00001958797.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000319748.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5556 chr22 HAVANA transcript 19967520 19978315 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000473551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-003"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318879.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5557 chr22 HAVANA exon 19978108 19978315 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000473551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-003"; exon_number 1; exon_id "ENSE00001899937.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318879.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5558 chr22 HAVANA exon 19969456 19969614 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000473551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-003"; exon_number 2; exon_id "ENSE00003508689.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318879.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5559 chr22 HAVANA exon 19967520 19969260 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000473551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ARVCF-003"; exon_number 3; exon_id "ENSE00001843384.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318879.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5560 chr22 HAVANA transcript 19968675 19974713 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000487793.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318881.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5561 chr22 HAVANA exon 19974596 19974713 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000487793.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-005"; exon_number 1; exon_id "ENSE00001925777.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318881.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5562 chr22 HAVANA exon 19969456 19969614 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000487793.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-005"; exon_number 2; exon_id "ENSE00003508689.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318881.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5563 chr22 HAVANA exon 19968675 19969260 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000487793.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-005"; exon_number 3; exon_id "ENSE00001817964.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318881.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5564 chr22 HAVANA transcript 19968905 19974678 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000492625.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-006"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318882.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5565 chr22 HAVANA exon 19974596 19974678 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000492625.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-006"; exon_number 1; exon_id "ENSE00001894564.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318882.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5566 chr22 HAVANA exon 19974174 19974206 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000492625.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-006"; exon_number 2; exon_id "ENSE00001957915.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318882.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5567 chr22 HAVANA exon 19969456 19969614 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000492625.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-006"; exon_number 3; exon_id "ENSE00003508689.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318882.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5568 chr22 HAVANA exon 19968905 19969260 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000492625.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-006"; exon_number 4; exon_id "ENSE00001909552.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318882.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5569 chr22 HAVANA transcript 19969068 19971276 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000462319.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-007"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318883.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5570 chr22 HAVANA exon 19971196 19971276 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000462319.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-007"; exon_number 1; exon_id "ENSE00001878553.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318883.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5571 chr22 HAVANA exon 19969456 19969614 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000462319.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-007"; exon_number 2; exon_id "ENSE00003508689.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318883.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5572 chr22 HAVANA exon 19969068 19969260 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000462319.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-007"; exon_number 3; exon_id "ENSE00001860218.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318883.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5573 chr22 HAVANA transcript 19969514 20004268 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000467828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-004"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318880.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5574 chr22 HAVANA exon 20004112 20004268 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000467828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-004"; exon_number 1; exon_id "ENSE00001862448.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318880.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5575 chr22 HAVANA exon 19969514 19969614 . - . gene_id "ENSG00000099889.9"; transcript_id "ENST00000467828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ARVCF"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ARVCF-004"; exon_number 2; exon_id "ENSE00001819499.1"; level 2; havana_gene "OTTHUMG00000030426.8"; havana_transcript "OTTHUMT00000318880.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5576 chr22 HAVANA gene 20004537 20053449 . + . gene_id "ENSG00000183597.11"; transcript_id "ENSG00000183597.11"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2"; level 2; tag "ncRNA_host"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5577 chr22 HAVANA transcript 20004537 20043727 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000471707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-018"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318761.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5578 chr22 HAVANA exon 20004537 20004715 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000471707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-018"; exon_number 1; exon_id "ENSE00001556273.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318761.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5579 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000471707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-018"; exon_number 2; exon_id "ENSE00003459859.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318761.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5580 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000471707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-018"; exon_number 3; exon_id "ENSE00003599656.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318761.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5581 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000471707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-018"; exon_number 4; exon_id "ENSE00003692755.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318761.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5582 chr22 HAVANA exon 20043466 20043727 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000471707.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-018"; exon_number 5; exon_id "ENSE00001843609.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318761.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5583 chr22 HAVANA transcript 20004537 20052881 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5584 chr22 HAVANA exon 20004537 20004715 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 1; exon_id "ENSE00001556273.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5585 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5586 chr22 HAVANA CDS 20024322 20024377 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5587 chr22 HAVANA start_codon 20024322 20024324 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5588 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5589 chr22 HAVANA CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5590 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5591 chr22 HAVANA CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5592 chr22 HAVANA exon 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 5; exon_id "ENSE00003502217.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5593 chr22 HAVANA CDS 20049053 20049206 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 5; exon_id "ENSE00003502217.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5594 chr22 HAVANA exon 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 6; exon_id "ENSE00003617485.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5595 chr22 HAVANA CDS 20050861 20050965 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 6; exon_id "ENSE00003617485.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5596 chr22 HAVANA exon 20052065 20052881 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 7; exon_id "ENSE00001558210.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5597 chr22 HAVANA CDS 20052065 20052182 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 7; exon_id "ENSE00001558210.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5598 chr22 HAVANA stop_codon 20052183 20052185 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; exon_number 7; exon_id "ENSE00001558210.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5599 chr22 HAVANA UTR 20004537 20004715 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5600 chr22 HAVANA UTR 20024283 20024321 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5601 chr22 HAVANA UTR 20052183 20052881 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318687.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5602 chr22 HAVANA transcript 20004554 20035703 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000475446.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-009"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318727.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5603 chr22 HAVANA exon 20004554 20004715 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000475446.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-009"; exon_number 1; exon_id "ENSE00001725884.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318727.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5604 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000475446.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-009"; exon_number 2; exon_id "ENSE00003459859.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318727.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5605 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000475446.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-009"; exon_number 3; exon_id "ENSE00003599656.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318727.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5606 chr22 HAVANA exon 20035493 20035703 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000475446.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-009"; exon_number 4; exon_id "ENSE00001885139.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318727.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5607 chr22 HAVANA transcript 20004554 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432198.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-006"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318692.22";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5608 chr22 HAVANA exon 20004554 20004715 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432198.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-006"; exon_number 1; exon_id "ENSE00001725884.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318692.22";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5609 chr22 HAVANA exon 20006704 20006822 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432198.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-006"; exon_number 2; exon_id "ENSE00001759051.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318692.22";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5610 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432198.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-006"; exon_number 3; exon_id "ENSE00003576153.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318692.22";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5611 chr22 HAVANA CDS 20024322 20024377 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000432198.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-006"; exon_number 3; exon_id "ENSE00003576153.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318692.22";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5612 chr22 HAVANA start_codon 20024322 20024324 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000432198.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-006"; exon_number 3; exon_id "ENSE00003576153.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318692.22";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5613 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432198.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-006"; exon_number 4; exon_id "ENSE00003487203.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318692.22";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5614 chr22 HAVANA CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000432198.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-006"; exon_number 4; exon_id "ENSE00003487203.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318692.22";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5615 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432198.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-006"; exon_number 5; exon_id "ENSE00003534619.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318692.22";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5616 chr22 HAVANA CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000432198.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-006"; exon_number 5; exon_id "ENSE00003534619.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318692.22";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5617 chr22 HAVANA UTR 20004554 20004715 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432198.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-006"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318692.22";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5618 chr22 HAVANA UTR 20006704 20006822 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432198.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-006"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318692.22";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5619 chr22 HAVANA UTR 20024283 20024321 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432198.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-006"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318692.22";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5620 chr22 ENSEMBL transcript 20004554 20052530 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5621 chr22 ENSEMBL exon 20004554 20004715 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 1; exon_id "ENSE00001725884.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5622 chr22 ENSEMBL exon 20006704 20006822 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 2; exon_id "ENSE00001759051.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5623 chr22 ENSEMBL exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 3; exon_id "ENSE00003576153.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5624 chr22 ENSEMBL CDS 20024322 20024377 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 3; exon_id "ENSE00003576153.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5625 chr22 ENSEMBL start_codon 20024322 20024324 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 3; exon_id "ENSE00003576153.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5626 chr22 ENSEMBL exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 4; exon_id "ENSE00003487203.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5627 chr22 ENSEMBL CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 4; exon_id "ENSE00003487203.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5628 chr22 ENSEMBL exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 5; exon_id "ENSE00003627611.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5629 chr22 ENSEMBL CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 5; exon_id "ENSE00003627611.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5630 chr22 ENSEMBL exon 20040960 20041074 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 6; exon_id "ENSE00003594113.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5631 chr22 ENSEMBL CDS 20040960 20041074 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 6; exon_id "ENSE00003594113.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5632 chr22 ENSEMBL exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 7; exon_id "ENSE00003513418.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5633 chr22 ENSEMBL CDS 20043466 20043536 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 7; exon_id "ENSE00003513418.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5634 chr22 ENSEMBL exon 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 8; exon_id "ENSE00003502217.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5635 chr22 ENSEMBL CDS 20049053 20049206 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 8; exon_id "ENSE00003502217.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5636 chr22 ENSEMBL exon 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 9; exon_id "ENSE00003617485.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5637 chr22 ENSEMBL CDS 20050861 20050965 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 9; exon_id "ENSE00003617485.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5638 chr22 ENSEMBL exon 20052065 20052530 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 10; exon_id "ENSE00002235103.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5639 chr22 ENSEMBL CDS 20052065 20052182 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 10; exon_id "ENSE00002235103.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5640 chr22 ENSEMBL stop_codon 20052183 20052185 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; exon_number 10; exon_id "ENSE00002235103.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5641 chr22 ENSEMBL UTR 20004554 20004715 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5642 chr22 ENSEMBL UTR 20006704 20006822 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5643 chr22 ENSEMBL UTR 20024283 20024321 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5644 chr22 ENSEMBL UTR 20052183 20052530 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000447208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-204"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5645 chr22 HAVANA transcript 20008592 20049179 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000411907.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-010"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318728.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5646 chr22 HAVANA exon 20008592 20008657 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000411907.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-010"; exon_number 1; exon_id "ENSE00001778323.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318728.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5647 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000411907.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-010"; exon_number 2; exon_id "ENSE00003459859.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318728.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5648 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000411907.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-010"; exon_number 3; exon_id "ENSE00003599656.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318728.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5649 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000411907.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-010"; exon_number 4; exon_id "ENSE00003692755.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318728.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5650 chr22 HAVANA exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000411907.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-010"; exon_number 5; exon_id "ENSE00003641190.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318728.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5651 chr22 HAVANA exon 20049053 20049179 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000411907.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-010"; exon_number 6; exon_id "ENSE00001735964.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318728.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5652 chr22 HAVANA transcript 20008595 20053449 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5653 chr22 HAVANA exon 20008595 20008657 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 1; exon_id "ENSE00001559489.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5654 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5655 chr22 HAVANA CDS 20024322 20024377 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5656 chr22 HAVANA start_codon 20024322 20024324 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5657 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5658 chr22 HAVANA CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5659 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5660 chr22 HAVANA CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5661 chr22 HAVANA exon 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 5; exon_id "ENSE00003502217.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5662 chr22 HAVANA CDS 20049053 20049206 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 5; exon_id "ENSE00003502217.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5663 chr22 HAVANA exon 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 6; exon_id "ENSE00003617485.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5664 chr22 HAVANA CDS 20050861 20050965 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 6; exon_id "ENSE00003617485.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5665 chr22 HAVANA exon 20052065 20053449 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 7; exon_id "ENSE00001552532.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5666 chr22 HAVANA CDS 20052065 20052182 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 7; exon_id "ENSE00001552532.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5667 chr22 HAVANA stop_codon 20052183 20052185 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; exon_number 7; exon_id "ENSE00001552532.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5668 chr22 HAVANA UTR 20008595 20008657 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5669 chr22 HAVANA UTR 20024283 20024321 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5670 chr22 HAVANA UTR 20052183 20053449 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000398042.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-007"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5671 chr22 HAVANA transcript 20008612 20053385 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5672 chr22 HAVANA exon 20008612 20008657 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; exon_number 1; exon_id "ENSE00001552408.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5673 chr22 HAVANA exon 20024283 20024617 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; exon_number 2; exon_id "ENSE00001547534.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5674 chr22 HAVANA CDS 20024439 20024617 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; exon_number 2; exon_id "ENSE00001547534.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5675 chr22 HAVANA start_codon 20024439 20024441 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; exon_number 2; exon_id "ENSE00001547534.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5676 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5677 chr22 HAVANA CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5678 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5679 chr22 HAVANA CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5680 chr22 HAVANA exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; exon_number 5; exon_id "ENSE00003553248.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5681 chr22 HAVANA CDS 20043466 20043527 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; exon_number 5; exon_id "ENSE00003553248.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5682 chr22 HAVANA stop_codon 20043528 20043530 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; exon_number 5; exon_id "ENSE00003553248.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5683 chr22 HAVANA exon 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; exon_number 6; exon_id "ENSE00003626934.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5684 chr22 HAVANA exon 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; exon_number 7; exon_id "ENSE00003600121.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5685 chr22 HAVANA exon 20052065 20053385 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; exon_number 8; exon_id "ENSE00001550147.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5686 chr22 HAVANA UTR 20008612 20008657 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5687 chr22 HAVANA UTR 20024283 20024438 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5688 chr22 HAVANA UTR 20043528 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5689 chr22 HAVANA UTR 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5690 chr22 HAVANA UTR 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5691 chr22 HAVANA UTR 20052065 20053385 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000399807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-004"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318690.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5692 chr22 HAVANA transcript 20008625 20049099 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5693 chr22 HAVANA exon 20008625 20008657 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; exon_number 1; exon_id "ENSE00001666863.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5694 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5695 chr22 HAVANA CDS 20024322 20024377 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5696 chr22 HAVANA start_codon 20024322 20024324 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5697 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5698 chr22 HAVANA CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5699 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5700 chr22 HAVANA CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5701 chr22 HAVANA exon 20040960 20041074 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; exon_number 5; exon_id "ENSE00003594113.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5702 chr22 HAVANA CDS 20040960 20041074 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; exon_number 5; exon_id "ENSE00003594113.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5703 chr22 HAVANA exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; exon_number 6; exon_id "ENSE00003513418.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5704 chr22 HAVANA CDS 20043466 20043536 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; exon_number 6; exon_id "ENSE00003513418.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5705 chr22 HAVANA exon 20049053 20049099 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; exon_number 7; exon_id "ENSE00001689229.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5706 chr22 HAVANA CDS 20049053 20049097 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; exon_number 7; exon_id "ENSE00001689229.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5707 chr22 HAVANA UTR 20008625 20008657 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5708 chr22 HAVANA UTR 20024283 20024321 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5709 chr22 HAVANA UTR 20049098 20049099 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-011"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318729.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5710 chr22 HAVANA transcript 20008630 20052787 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5711 chr22 HAVANA exon 20008630 20008769 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 1; exon_id "ENSE00001786633.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5712 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5713 chr22 HAVANA CDS 20024322 20024377 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5714 chr22 HAVANA start_codon 20024322 20024324 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5715 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5716 chr22 HAVANA CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5717 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5718 chr22 HAVANA CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5719 chr22 HAVANA exon 20040883 20041074 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 5; exon_id "ENSE00001748028.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5720 chr22 HAVANA CDS 20040883 20040980 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 5; exon_id "ENSE00001748028.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5721 chr22 HAVANA stop_codon 20040981 20040983 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 5; exon_id "ENSE00001748028.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5722 chr22 HAVANA exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 6; exon_id "ENSE00003641190.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5723 chr22 HAVANA exon 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 7; exon_id "ENSE00003626934.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5724 chr22 HAVANA exon 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 8; exon_id "ENSE00003600121.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5725 chr22 HAVANA exon 20052065 20052787 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; exon_number 9; exon_id "ENSE00001800905.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5726 chr22 HAVANA UTR 20008630 20008769 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5727 chr22 HAVANA UTR 20024283 20024321 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5728 chr22 HAVANA UTR 20040981 20041074 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5729 chr22 HAVANA UTR 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5730 chr22 HAVANA UTR 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5731 chr22 HAVANA UTR 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5732 chr22 HAVANA UTR 20052065 20052787 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000450019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-002"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5733 chr22 HAVANA transcript 20008631 20053449 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5734 chr22 HAVANA exon 20008631 20008769 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 1; exon_id "ENSE00001325554.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5735 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5736 chr22 HAVANA CDS 20024322 20024377 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5737 chr22 HAVANA start_codon 20024322 20024324 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5738 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5739 chr22 HAVANA CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5740 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5741 chr22 HAVANA CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5742 chr22 HAVANA exon 20040960 20041074 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 5; exon_id "ENSE00003594113.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5743 chr22 HAVANA CDS 20040960 20041074 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 5; exon_id "ENSE00003594113.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5744 chr22 HAVANA exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 6; exon_id "ENSE00003513418.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5745 chr22 HAVANA CDS 20043466 20043536 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 6; exon_id "ENSE00003513418.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5746 chr22 HAVANA exon 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 7; exon_id "ENSE00003502217.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5747 chr22 HAVANA CDS 20049053 20049206 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 7; exon_id "ENSE00003502217.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5748 chr22 HAVANA exon 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 8; exon_id "ENSE00003617485.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5749 chr22 HAVANA CDS 20050861 20050965 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 8; exon_id "ENSE00003617485.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5750 chr22 HAVANA exon 20052065 20053449 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 9; exon_id "ENSE00001552532.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5751 chr22 HAVANA CDS 20052065 20052182 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 9; exon_id "ENSE00001552532.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5752 chr22 HAVANA stop_codon 20052183 20052185 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; exon_number 9; exon_id "ENSE00001552532.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5753 chr22 HAVANA UTR 20008631 20008769 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5754 chr22 HAVANA UTR 20024283 20024321 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5755 chr22 HAVANA UTR 20052183 20053449 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000327374.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-003"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13772.1"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318689.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5756 chr22 HAVANA transcript 20008631 20053447 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5757 chr22 HAVANA exon 20008631 20008769 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 1; exon_id "ENSE00001325554.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5758 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5759 chr22 HAVANA CDS 20024322 20024377 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5760 chr22 HAVANA start_codon 20024322 20024324 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5761 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5762 chr22 HAVANA CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5763 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5764 chr22 HAVANA CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5765 chr22 HAVANA exon 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 5; exon_id "ENSE00003502217.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5766 chr22 HAVANA CDS 20049053 20049206 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 5; exon_id "ENSE00003502217.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5767 chr22 HAVANA exon 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 6; exon_id "ENSE00003617485.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5768 chr22 HAVANA CDS 20050861 20050965 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 6; exon_id "ENSE00003617485.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5769 chr22 HAVANA exon 20052065 20053447 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 7; exon_id "ENSE00001331602.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5770 chr22 HAVANA CDS 20052065 20052182 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 7; exon_id "ENSE00001331602.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5771 chr22 HAVANA stop_codon 20052183 20052185 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; exon_number 7; exon_id "ENSE00001331602.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5772 chr22 HAVANA UTR 20008631 20008769 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5773 chr22 HAVANA UTR 20024283 20024321 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5774 chr22 HAVANA UTR 20052183 20053447 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000432883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-202"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318725.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5775 chr22 HAVANA transcript 20008645 20041065 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000479679.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-008"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318726.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5776 chr22 HAVANA exon 20008645 20008769 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000479679.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-008"; exon_number 1; exon_id "ENSE00001908401.1"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318726.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5777 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000479679.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-008"; exon_number 2; exon_id "ENSE00003459859.1"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318726.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5778 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000479679.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-008"; exon_number 3; exon_id "ENSE00003599656.1"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318726.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5779 chr22 HAVANA exon 20035493 20035851 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000479679.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-008"; exon_number 4; exon_id "ENSE00001942657.1"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318726.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5780 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000479679.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-008"; exon_number 5; exon_id "ENSE00003692755.1"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318726.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5781 chr22 HAVANA exon 20040960 20041065 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000479679.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-008"; exon_number 6; exon_id "ENSE00001897403.1"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318726.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5782 chr22 HAVANA transcript 20008650 20050944 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5783 chr22 HAVANA exon 20008650 20008769 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; exon_number 1; exon_id "ENSE00001622831.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5784 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5785 chr22 HAVANA CDS 20024322 20024377 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5786 chr22 HAVANA start_codon 20024322 20024324 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5787 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5788 chr22 HAVANA CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5789 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5790 chr22 HAVANA CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5791 chr22 HAVANA exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; exon_number 5; exon_id "ENSE00003553248.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5792 chr22 HAVANA CDS 20043466 20043527 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; exon_number 5; exon_id "ENSE00003553248.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5793 chr22 HAVANA stop_codon 20043528 20043530 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; exon_number 5; exon_id "ENSE00003553248.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5794 chr22 HAVANA exon 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; exon_number 6; exon_id "ENSE00003626934.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5795 chr22 HAVANA exon 20050861 20050944 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; exon_number 7; exon_id "ENSE00001774098.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5796 chr22 HAVANA UTR 20008650 20008769 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5797 chr22 HAVANA UTR 20024283 20024321 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5798 chr22 HAVANA UTR 20043528 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5799 chr22 HAVANA UTR 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5800 chr22 HAVANA UTR 20050861 20050944 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000430807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-012"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318730.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5801 chr22 HAVANA transcript 20008662 20052887 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5802 chr22 HAVANA exon 20008662 20008769 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 1; exon_id "ENSE00001553557.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5803 chr22 HAVANA exon 20024283 20024617 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 2; exon_id "ENSE00001547534.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5804 chr22 HAVANA CDS 20024439 20024617 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 2; exon_id "ENSE00001547534.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5805 chr22 HAVANA start_codon 20024439 20024441 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 2; exon_id "ENSE00001547534.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5806 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5807 chr22 HAVANA CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5808 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5809 chr22 HAVANA CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5810 chr22 HAVANA exon 20040960 20041074 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 5; exon_id "ENSE00003594113.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5811 chr22 HAVANA CDS 20040960 20041074 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 5; exon_id "ENSE00003594113.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5812 chr22 HAVANA exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 6; exon_id "ENSE00003513418.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5813 chr22 HAVANA CDS 20043466 20043536 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 6; exon_id "ENSE00003513418.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5814 chr22 HAVANA exon 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 7; exon_id "ENSE00003502217.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5815 chr22 HAVANA CDS 20049053 20049206 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 7; exon_id "ENSE00003502217.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5816 chr22 HAVANA exon 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 8; exon_id "ENSE00003617485.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5817 chr22 HAVANA CDS 20050861 20050965 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 8; exon_id "ENSE00003617485.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5818 chr22 HAVANA exon 20052065 20052887 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 9; exon_id "ENSE00001561892.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5819 chr22 HAVANA CDS 20052065 20052182 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 9; exon_id "ENSE00001561892.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5820 chr22 HAVANA stop_codon 20052183 20052185 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; exon_number 9; exon_id "ENSE00001561892.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5821 chr22 HAVANA UTR 20008662 20008769 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5822 chr22 HAVANA UTR 20024283 20024438 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5823 chr22 HAVANA UTR 20052183 20052887 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000401833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TANGO2-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318691.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5824 chr22 HAVANA transcript 20008678 20050934 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5825 chr22 HAVANA exon 20008678 20008821 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 1; exon_id "ENSE00001691506.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5826 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5827 chr22 HAVANA CDS 20024322 20024377 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5828 chr22 HAVANA start_codon 20024322 20024324 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 2; exon_id "ENSE00003576153.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5829 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5830 chr22 HAVANA CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 3; exon_id "ENSE00003487203.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5831 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5832 chr22 HAVANA CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 4; exon_id "ENSE00003627611.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5833 chr22 HAVANA exon 20040960 20041074 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 5; exon_id "ENSE00003594113.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5834 chr22 HAVANA CDS 20040960 20041074 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 5; exon_id "ENSE00003594113.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5835 chr22 HAVANA exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 6; exon_id "ENSE00003513418.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5836 chr22 HAVANA CDS 20043466 20043536 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 6; exon_id "ENSE00003513418.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5837 chr22 HAVANA exon 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 7; exon_id "ENSE00003502217.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5838 chr22 HAVANA CDS 20049053 20049206 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 7; exon_id "ENSE00003502217.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5839 chr22 HAVANA exon 20050861 20050934 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 8; exon_id "ENSE00001736160.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5840 chr22 HAVANA CDS 20050861 20050934 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; exon_number 8; exon_id "ENSE00001736160.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5841 chr22 HAVANA UTR 20008678 20008821 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5842 chr22 HAVANA UTR 20024283 20024321 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-014"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5843 chr22 HAVANA transcript 20024282 20049325 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000462579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-019"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318762.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5844 chr22 HAVANA exon 20024282 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000462579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-019"; exon_number 1; exon_id "ENSE00003476075.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318762.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5845 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000462579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-019"; exon_number 2; exon_id "ENSE00003599656.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318762.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5846 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000462579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-019"; exon_number 3; exon_id "ENSE00003692755.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318762.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5847 chr22 HAVANA exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000462579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-019"; exon_number 4; exon_id "ENSE00003641190.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318762.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5848 chr22 HAVANA exon 20049053 20049325 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000462579.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-019"; exon_number 5; exon_id "ENSE00001905490.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318762.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5849 chr22 HAVANA transcript 20024282 20052430 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5850 chr22 HAVANA exon 20024282 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; exon_number 1; exon_id "ENSE00003508240.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5851 chr22 HAVANA CDS 20024322 20024377 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; exon_number 1; exon_id "ENSE00003508240.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5852 chr22 HAVANA start_codon 20024322 20024324 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; exon_number 1; exon_id "ENSE00003508240.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5853 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; exon_number 2; exon_id "ENSE00003487203.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5854 chr22 HAVANA CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; exon_number 2; exon_id "ENSE00003487203.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5855 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; exon_number 3; exon_id "ENSE00003627611.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5856 chr22 HAVANA CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; exon_number 3; exon_id "ENSE00003627611.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5857 chr22 HAVANA exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; exon_number 4; exon_id "ENSE00003553248.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5858 chr22 HAVANA CDS 20043466 20043527 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; exon_number 4; exon_id "ENSE00003553248.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5859 chr22 HAVANA stop_codon 20043528 20043530 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; exon_number 4; exon_id "ENSE00003553248.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5860 chr22 HAVANA exon 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; exon_number 5; exon_id "ENSE00003600121.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5861 chr22 HAVANA exon 20052065 20052430 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; exon_number 6; exon_id "ENSE00001648495.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5862 chr22 HAVANA UTR 20024282 20024321 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5863 chr22 HAVANA UTR 20043528 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5864 chr22 HAVANA UTR 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5865 chr22 HAVANA UTR 20052065 20052430 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000444651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TANGO2-015"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318735.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5866 chr22 ENSEMBL transcript 20024282 20052216 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5867 chr22 ENSEMBL exon 20024282 20024617 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; exon_number 1; exon_id "ENSE00001647879.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5868 chr22 ENSEMBL CDS 20024439 20024617 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; exon_number 1; exon_id "ENSE00001647879.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5869 chr22 ENSEMBL start_codon 20024439 20024441 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; exon_number 1; exon_id "ENSE00001647879.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5870 chr22 ENSEMBL exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; exon_number 2; exon_id "ENSE00003487203.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5871 chr22 ENSEMBL CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; exon_number 2; exon_id "ENSE00003487203.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5872 chr22 ENSEMBL exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; exon_number 3; exon_id "ENSE00003627611.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5873 chr22 ENSEMBL CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; exon_number 3; exon_id "ENSE00003627611.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5874 chr22 ENSEMBL exon 20040960 20041074 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; exon_number 4; exon_id "ENSE00003594113.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5875 chr22 ENSEMBL CDS 20040960 20041074 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; exon_number 4; exon_id "ENSE00003594113.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5876 chr22 ENSEMBL exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; exon_number 5; exon_id "ENSE00003513418.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5877 chr22 ENSEMBL CDS 20043466 20043536 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; exon_number 5; exon_id "ENSE00003513418.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5878 chr22 ENSEMBL exon 20052065 20052216 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; exon_number 6; exon_id "ENSE00001773814.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5879 chr22 ENSEMBL CDS 20052065 20052084 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; exon_number 6; exon_id "ENSE00001773814.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5880 chr22 ENSEMBL stop_codon 20052085 20052087 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; exon_number 6; exon_id "ENSE00001773814.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5881 chr22 ENSEMBL UTR 20024282 20024438 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5882 chr22 ENSEMBL UTR 20052085 20052216 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000434570.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5883 chr22 ENSEMBL transcript 20024282 20052360 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5884 chr22 ENSEMBL exon 20024282 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; exon_number 1; exon_id "ENSE00003476075.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5885 chr22 ENSEMBL exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; exon_number 2; exon_id "ENSE00003599656.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5886 chr22 ENSEMBL exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; exon_number 3; exon_id "ENSE00003586886.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5887 chr22 ENSEMBL CDS 20040022 20040107 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; exon_number 3; exon_id "ENSE00003586886.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5888 chr22 ENSEMBL start_codon 20040022 20040024 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; exon_number 3; exon_id "ENSE00003586886.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5889 chr22 ENSEMBL exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; exon_number 4; exon_id "ENSE00003513418.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5890 chr22 ENSEMBL CDS 20043466 20043536 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; exon_number 4; exon_id "ENSE00003513418.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5891 chr22 ENSEMBL exon 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; exon_number 5; exon_id "ENSE00003502217.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5892 chr22 ENSEMBL CDS 20049053 20049206 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; exon_number 5; exon_id "ENSE00003502217.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5893 chr22 ENSEMBL exon 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; exon_number 6; exon_id "ENSE00003617485.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5894 chr22 ENSEMBL CDS 20050861 20050965 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; exon_number 6; exon_id "ENSE00003617485.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5895 chr22 ENSEMBL exon 20052065 20052360 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; exon_number 7; exon_id "ENSE00002292746.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5896 chr22 ENSEMBL CDS 20052065 20052182 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; exon_number 7; exon_id "ENSE00002292746.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5897 chr22 ENSEMBL stop_codon 20052183 20052185 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; exon_number 7; exon_id "ENSE00002292746.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5898 chr22 ENSEMBL UTR 20024282 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5899 chr22 ENSEMBL UTR 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5900 chr22 ENSEMBL UTR 20039988 20040021 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5901 chr22 ENSEMBL UTR 20052183 20052360 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000420290.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5902 chr22 HAVANA transcript 20024283 20043764 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000484373.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-021"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000319787.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5903 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000484373.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-021"; exon_number 1; exon_id "ENSE00003459859.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000319787.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5904 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000484373.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-021"; exon_number 2; exon_id "ENSE00003599656.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000319787.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5905 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000484373.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-021"; exon_number 3; exon_id "ENSE00003692755.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000319787.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5906 chr22 HAVANA exon 20040960 20043764 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000484373.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TANGO2-021"; exon_number 4; exon_id "ENSE00001930256.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000319787.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5907 chr22 HAVANA transcript 20024283 20050906 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000485715.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-013"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000319786.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5908 chr22 HAVANA exon 20024283 20024377 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000485715.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-013"; exon_number 1; exon_id "ENSE00003459859.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000319786.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5909 chr22 HAVANA exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000485715.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-013"; exon_number 2; exon_id "ENSE00003599656.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000319786.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5910 chr22 HAVANA exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000485715.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-013"; exon_number 3; exon_id "ENSE00003692755.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000319786.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5911 chr22 HAVANA exon 20040960 20041074 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000485715.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-013"; exon_number 4; exon_id "ENSE00003586078.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000319786.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5912 chr22 HAVANA exon 20049053 20049204 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000485715.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-013"; exon_number 5; exon_id "ENSE00001928009.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000319786.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5913 chr22 HAVANA exon 20050861 20050906 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000485715.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-013"; exon_number 6; exon_id "ENSE00001936544.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000319786.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5914 chr22 ENSEMBL transcript 20024547 20053447 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5915 chr22 ENSEMBL exon 20024547 20024617 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 1; exon_id "ENSE00001748983.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5916 chr22 ENSEMBL CDS 20024547 20024617 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 1; exon_id "ENSE00001748983.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5917 chr22 ENSEMBL start_codon 20024547 20024549 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 1; exon_id "ENSE00001748983.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5918 chr22 ENSEMBL exon 20030878 20030966 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 2; exon_id "ENSE00003487203.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5919 chr22 ENSEMBL CDS 20030878 20030966 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 2; exon_id "ENSE00003487203.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5920 chr22 ENSEMBL exon 20039988 20040107 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 3; exon_id "ENSE00003627611.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5921 chr22 ENSEMBL CDS 20039988 20040107 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 3; exon_id "ENSE00003627611.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5922 chr22 ENSEMBL exon 20040960 20041074 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 4; exon_id "ENSE00003594113.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5923 chr22 ENSEMBL CDS 20040960 20041074 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 4; exon_id "ENSE00003594113.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5924 chr22 ENSEMBL exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 5; exon_id "ENSE00003513418.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5925 chr22 ENSEMBL CDS 20043466 20043536 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 5; exon_id "ENSE00003513418.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5926 chr22 ENSEMBL exon 20049053 20049206 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 6; exon_id "ENSE00003502217.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5927 chr22 ENSEMBL CDS 20049053 20049206 . + 2 gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 6; exon_id "ENSE00003502217.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5928 chr22 ENSEMBL exon 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 7; exon_id "ENSE00003617485.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5929 chr22 ENSEMBL CDS 20050861 20050965 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 7; exon_id "ENSE00003617485.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5930 chr22 ENSEMBL exon 20052065 20053447 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 8; exon_id "ENSE00001331602.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5931 chr22 ENSEMBL CDS 20052065 20052182 . + 1 gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 8; exon_id "ENSE00001331602.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5932 chr22 ENSEMBL stop_codon 20052183 20052185 . + 0 gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; exon_number 8; exon_id "ENSE00001331602.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5933 chr22 ENSEMBL UTR 20052183 20053447 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000456048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TANGO2-205"; level 3; tag "basic"; havana_gene "OTTHUMG00000150510.24";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5934 chr22 HAVANA transcript 20040958 20052482 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000490583.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-016"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318736.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5935 chr22 HAVANA exon 20040958 20041074 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000490583.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-016"; exon_number 1; exon_id "ENSE00001861927.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318736.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5936 chr22 HAVANA exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000490583.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-016"; exon_number 2; exon_id "ENSE00003641190.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318736.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5937 chr22 HAVANA exon 20049053 20049229 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000490583.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-016"; exon_number 3; exon_id "ENSE00001849208.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318736.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5938 chr22 HAVANA exon 20050861 20050965 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000490583.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-016"; exon_number 4; exon_id "ENSE00003600121.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318736.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5939 chr22 HAVANA exon 20052065 20052482 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000490583.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TANGO2-016"; exon_number 5; exon_id "ENSE00001823904.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318736.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5940 chr22 HAVANA transcript 20043466 20048750 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000490121.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TANGO2-017"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318737.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5941 chr22 HAVANA exon 20043466 20043536 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000490121.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TANGO2-017"; exon_number 1; exon_id "ENSE00003641190.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318737.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5942 chr22 HAVANA exon 20048697 20048750 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000490121.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TANGO2-017"; exon_number 2; exon_id "ENSE00001815102.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318737.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5943 chr22 HAVANA transcript 20051096 20052452 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000476940.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TANGO2-020"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318763.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5944 chr22 HAVANA exon 20051096 20051121 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000476940.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TANGO2-020"; exon_number 1; exon_id "ENSE00001923199.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318763.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5945 chr22 HAVANA exon 20052065 20052452 . + . gene_id "ENSG00000183597.11"; transcript_id "ENST00000476940.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TANGO2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TANGO2-020"; exon_number 2; exon_id "ENSE00001936136.1"; level 2; havana_gene "OTTHUMG00000150510.24"; havana_transcript "OTTHUMT00000318763.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5946 chr22 ENSEMBL gene 20020662 20020743 . + . gene_id "ENSG00000208023.1"; transcript_id "ENSG00000208023.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR185"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR185"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5947 chr22 ENSEMBL transcript 20020662 20020743 . + . gene_id "ENSG00000208023.1"; transcript_id "ENST00000385288.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR185"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR185-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5948 chr22 ENSEMBL exon 20020662 20020743 . + . gene_id "ENSG00000208023.1"; transcript_id "ENST00000385288.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR185"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR185-201"; exon_number 1; exon_id "ENSE00001500294.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5949 chr22 HAVANA gene 20050503 20058066 . - . gene_id "ENSG00000236540.3"; transcript_id "ENSG00000236540.3"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AC006547.13"; level 1; havana_gene "OTTHUMG00000150731.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5950 chr22 HAVANA transcript 20050503 20053600 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000415503.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000319848.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5951 chr22 HAVANA exon 20053402 20053600 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000415503.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-001"; exon_number 1; exon_id "ENSE00001725904.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000319848.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5952 chr22 HAVANA exon 20052669 20052803 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000415503.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-001"; exon_number 2; exon_id "ENSE00001592670.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000319848.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5953 chr22 HAVANA exon 20050503 20050676 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000415503.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-001"; exon_number 3; exon_id "ENSE00001681762.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000319848.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5954 chr22 HAVANA transcript 20050534 20053957 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000608610.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-008"; level 2; tag "NAGNAG_splice_site"; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000472890.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5955 chr22 HAVANA exon 20053402 20053957 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000608610.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-008"; exon_number 1; exon_id "ENSE00003704510.1"; level 2; tag "NAGNAG_splice_site"; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000472890.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5956 chr22 HAVANA exon 20052669 20052803 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000608610.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-008"; exon_number 2; exon_id "ENSE00001592670.1"; level 2; tag "NAGNAG_splice_site"; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000472890.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5957 chr22 HAVANA exon 20050534 20050673 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000608610.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-008"; exon_number 3; exon_id "ENSE00003058957.1"; level 2; tag "NAGNAG_splice_site"; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000472890.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5958 chr22 HAVANA transcript 20050534 20056685 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000600937.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-007"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461462.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5959 chr22 HAVANA exon 20056566 20056685 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000600937.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-007"; exon_number 1; exon_id "ENSE00003178383.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461462.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5960 chr22 HAVANA exon 20054537 20054772 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000600937.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-007"; exon_number 2; exon_id "ENSE00003023370.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461462.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5961 chr22 HAVANA exon 20052669 20052803 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000600937.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-007"; exon_number 3; exon_id "ENSE00001592670.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461462.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5962 chr22 HAVANA exon 20050534 20050673 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000600937.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-007"; exon_number 4; exon_id "ENSE00003058957.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461462.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5963 chr22 HAVANA transcript 20050534 20057784 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000595864.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5964 chr22 HAVANA exon 20057494 20057784 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000595864.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-004"; exon_number 1; exon_id "ENSE00002981587.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5965 chr22 HAVANA exon 20056566 20056687 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000595864.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-004"; exon_number 2; exon_id "ENSE00003145309.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5966 chr22 HAVANA exon 20052669 20052803 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000595864.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-004"; exon_number 3; exon_id "ENSE00001592670.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5967 chr22 HAVANA exon 20050534 20050651 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000595864.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-004"; exon_number 4; exon_id "ENSE00003174670.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461463.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5968 chr22 HAVANA transcript 20050534 20057797 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000596334.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5969 chr22 HAVANA exon 20057494 20057797 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000596334.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-005"; exon_number 1; exon_id "ENSE00003054979.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5970 chr22 HAVANA exon 20056566 20056687 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000596334.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-005"; exon_number 2; exon_id "ENSE00003145309.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5971 chr22 HAVANA exon 20052669 20052803 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000596334.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-005"; exon_number 3; exon_id "ENSE00001592670.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5972 chr22 HAVANA exon 20050534 20050673 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000596334.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-005"; exon_number 4; exon_id "ENSE00003058957.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461464.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5973 chr22 HAVANA transcript 20050534 20057977 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000600617.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-006"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461465.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5974 chr22 HAVANA exon 20057494 20057977 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000600617.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-006"; exon_number 1; exon_id "ENSE00003072924.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461465.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5975 chr22 HAVANA exon 20056566 20056687 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000600617.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-006"; exon_number 2; exon_id "ENSE00003145309.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461465.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5976 chr22 HAVANA exon 20052669 20052803 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000600617.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-006"; exon_number 3; exon_id "ENSE00001592670.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461465.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5977 chr22 HAVANA exon 20050534 20050670 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000600617.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-006"; exon_number 4; exon_id "ENSE00003058722.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461465.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5978 chr22 HAVANA transcript 20050534 20058023 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000601746.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461466.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5979 chr22 HAVANA exon 20057494 20058023 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000601746.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-003"; exon_number 1; exon_id "ENSE00003193393.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461466.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5980 chr22 HAVANA exon 20056566 20056687 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000601746.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-003"; exon_number 2; exon_id "ENSE00003145309.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461466.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5981 chr22 HAVANA exon 20052669 20052803 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000601746.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-003"; exon_number 3; exon_id "ENSE00001592670.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461466.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5982 chr22 HAVANA exon 20050534 20050676 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000601746.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-003"; exon_number 4; exon_id "ENSE00002994005.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461466.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5983 chr22 HAVANA transcript 20050534 20058045 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000598339.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5984 chr22 HAVANA exon 20057494 20058045 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000598339.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-002"; exon_number 1; exon_id "ENSE00003113034.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5985 chr22 HAVANA exon 20052669 20052803 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000598339.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-002"; exon_number 2; exon_id "ENSE00001592670.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5986 chr22 HAVANA exon 20050534 20050651 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000598339.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-002"; exon_number 3; exon_id "ENSE00003174670.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000461467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5987 chr22 HAVANA transcript 20050557 20056688 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000609644.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-009"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000472891.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5988 chr22 HAVANA exon 20056566 20056688 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000609644.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-009"; exon_number 1; exon_id "ENSE00003709219.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000472891.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5989 chr22 HAVANA exon 20054537 20054772 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000609644.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-009"; exon_number 2; exon_id "ENSE00003023370.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000472891.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5990 chr22 HAVANA exon 20052669 20052803 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000609644.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-009"; exon_number 3; exon_id "ENSE00001592670.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000472891.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5991 chr22 HAVANA exon 20050557 20050651 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000609644.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-009"; exon_number 4; exon_id "ENSE00003705749.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000472891.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5992 chr22 HAVANA transcript 20050557 20058066 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000609191.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-010"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000472892.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5993 chr22 HAVANA exon 20057494 20058066 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000609191.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-010"; exon_number 1; exon_id "ENSE00003710930.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000472892.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5994 chr22 HAVANA exon 20052669 20052803 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000609191.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-010"; exon_number 2; exon_id "ENSE00001592670.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000472892.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5995 chr22 HAVANA exon 20050557 20050676 . - . gene_id "ENSG00000236540.3"; transcript_id "ENST00000609191.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.13"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.13-010"; exon_number 3; exon_id "ENSE00003706096.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150731.3"; havana_transcript "OTTHUMT00000472892.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5996 chr22 HAVANA gene 20052075 20053228 . - . gene_id "ENSG00000268292.1"; transcript_id "ENSG00000268292.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.15"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AC006547.15"; level 2; havana_gene "OTTHUMG00000182465.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5997 chr22 HAVANA transcript 20052075 20053228 . - . gene_id "ENSG00000268292.1"; transcript_id "ENST00000600090.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.15"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.15-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000182465.1"; havana_transcript "OTTHUMT00000461468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5998 chr22 HAVANA exon 20053019 20053228 . - . gene_id "ENSG00000268292.1"; transcript_id "ENST00000600090.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.15"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.15-001"; exon_number 1; exon_id "ENSE00003218311.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000182465.1"; havana_transcript "OTTHUMT00000461468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
5999 chr22 HAVANA exon 20052075 20052447 . - . gene_id "ENSG00000268292.1"; transcript_id "ENST00000600090.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.15"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.15-001"; exon_number 2; exon_id "ENSE00003143263.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000182465.1"; havana_transcript "OTTHUMT00000461468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6000 chr22 HAVANA gene 20067755 20099400 . + . gene_id "ENSG00000128191.9"; transcript_id "ENSG00000128191.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8"; level 2; tag "ncRNA_host"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6001 chr22 HAVANA transcript 20067755 20099394 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6002 chr22 HAVANA exon 20067755 20067906 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 1; exon_id "ENSE00001833496.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6003 chr22 HAVANA exon 20073210 20074206 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 2; exon_id "ENSE00001192072.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6004 chr22 HAVANA CDS 20073487 20074206 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 2; exon_id "ENSE00001192072.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6005 chr22 HAVANA start_codon 20073487 20073489 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 2; exon_id "ENSE00001192072.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6006 chr22 HAVANA exon 20074685 20074844 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 3; exon_id "ENSE00001056489.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6007 chr22 HAVANA CDS 20074685 20074844 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 3; exon_id "ENSE00001056489.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6008 chr22 HAVANA exon 20077192 20077334 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 4; exon_id "ENSE00003517899.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6009 chr22 HAVANA CDS 20077192 20077334 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 4; exon_id "ENSE00003517899.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6010 chr22 HAVANA exon 20077499 20077781 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 5; exon_id "ENSE00003561981.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6011 chr22 HAVANA CDS 20077499 20077781 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 5; exon_id "ENSE00003561981.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6012 chr22 HAVANA exon 20078958 20079155 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 6; exon_id "ENSE00003622027.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6013 chr22 HAVANA CDS 20078958 20079155 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 6; exon_id "ENSE00003622027.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6014 chr22 HAVANA exon 20079392 20079493 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 7; exon_id "ENSE00003545395.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6015 chr22 HAVANA CDS 20079392 20079493 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 7; exon_id "ENSE00003545395.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6016 chr22 HAVANA exon 20080332 20080430 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 8; exon_id "ENSE00003460151.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6017 chr22 HAVANA CDS 20080332 20080430 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 8; exon_id "ENSE00003460151.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6018 chr22 HAVANA exon 20082236 20082318 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 9; exon_id "ENSE00003570746.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6019 chr22 HAVANA CDS 20082236 20082318 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 9; exon_id "ENSE00003570746.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6020 chr22 HAVANA exon 20093700 20093800 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 10; exon_id "ENSE00003489431.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6021 chr22 HAVANA CDS 20093700 20093800 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 10; exon_id "ENSE00003489431.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6022 chr22 HAVANA exon 20094115 20094221 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 11; exon_id "ENSE00003630574.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6023 chr22 HAVANA CDS 20094115 20094221 . + 1 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 11; exon_id "ENSE00003630574.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6024 chr22 HAVANA exon 20094794 20094921 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 12; exon_id "ENSE00003532312.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6025 chr22 HAVANA CDS 20094794 20094921 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 12; exon_id "ENSE00003532312.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6026 chr22 HAVANA exon 20096413 20096526 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 13; exon_id "ENSE00003671712.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6027 chr22 HAVANA CDS 20096413 20096526 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 13; exon_id "ENSE00003671712.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6028 chr22 HAVANA exon 20097548 20099394 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 14; exon_id "ENSE00001896271.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6029 chr22 HAVANA CDS 20097548 20097628 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 14; exon_id "ENSE00001896271.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6030 chr22 HAVANA stop_codon 20097629 20097631 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; exon_number 14; exon_id "ENSE00001896271.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6031 chr22 HAVANA UTR 20067755 20067906 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6032 chr22 HAVANA UTR 20073210 20073486 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6033 chr22 HAVANA UTR 20097629 20099394 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000351989.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13773.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6034 chr22 ENSEMBL transcript 20067755 20099398 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6035 chr22 ENSEMBL exon 20067755 20067906 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 1; exon_id "ENSE00001833496.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6036 chr22 ENSEMBL exon 20073210 20074206 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 2; exon_id "ENSE00001192072.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6037 chr22 ENSEMBL CDS 20073487 20074206 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 2; exon_id "ENSE00001192072.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6038 chr22 ENSEMBL start_codon 20073487 20073489 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 2; exon_id "ENSE00001192072.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6039 chr22 ENSEMBL exon 20074685 20074844 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 3; exon_id "ENSE00001056489.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6040 chr22 ENSEMBL CDS 20074685 20074844 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 3; exon_id "ENSE00001056489.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6041 chr22 ENSEMBL exon 20077192 20077334 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 4; exon_id "ENSE00003517899.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6042 chr22 ENSEMBL CDS 20077192 20077334 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 4; exon_id "ENSE00003517899.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6043 chr22 ENSEMBL exon 20077499 20077781 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 5; exon_id "ENSE00003561981.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6044 chr22 ENSEMBL CDS 20077499 20077781 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 5; exon_id "ENSE00003561981.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6045 chr22 ENSEMBL exon 20078958 20079155 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 6; exon_id "ENSE00003622027.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6046 chr22 ENSEMBL CDS 20078958 20079155 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 6; exon_id "ENSE00003622027.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6047 chr22 ENSEMBL exon 20079392 20079493 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 7; exon_id "ENSE00003545395.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6048 chr22 ENSEMBL CDS 20079392 20079493 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 7; exon_id "ENSE00003545395.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6049 chr22 ENSEMBL exon 20082236 20082318 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 8; exon_id "ENSE00003570746.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6050 chr22 ENSEMBL CDS 20082236 20082318 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 8; exon_id "ENSE00003570746.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6051 chr22 ENSEMBL exon 20093700 20093800 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 9; exon_id "ENSE00003489431.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6052 chr22 ENSEMBL CDS 20093700 20093800 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 9; exon_id "ENSE00003489431.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6053 chr22 ENSEMBL exon 20094115 20094221 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 10; exon_id "ENSE00003630574.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6054 chr22 ENSEMBL CDS 20094115 20094221 . + 1 gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 10; exon_id "ENSE00003630574.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6055 chr22 ENSEMBL exon 20094794 20094921 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 11; exon_id "ENSE00003532312.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6056 chr22 ENSEMBL CDS 20094794 20094921 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 11; exon_id "ENSE00003532312.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6057 chr22 ENSEMBL exon 20096413 20096526 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 12; exon_id "ENSE00003671712.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6058 chr22 ENSEMBL CDS 20096413 20096526 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 12; exon_id "ENSE00003671712.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6059 chr22 ENSEMBL exon 20097548 20099398 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 13; exon_id "ENSE00001399025.3"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6060 chr22 ENSEMBL CDS 20097548 20097628 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 13; exon_id "ENSE00001399025.3"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6061 chr22 ENSEMBL stop_codon 20097629 20097631 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; exon_number 13; exon_id "ENSE00001399025.3"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6062 chr22 ENSEMBL UTR 20067755 20067906 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6063 chr22 ENSEMBL UTR 20073210 20073486 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6064 chr22 ENSEMBL UTR 20097629 20099398 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000383024.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6065 chr22 HAVANA transcript 20068092 20073862 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000457069.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000319850.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6066 chr22 HAVANA exon 20068092 20068208 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000457069.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-009"; exon_number 1; exon_id "ENSE00001661743.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000319850.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6067 chr22 HAVANA exon 20073210 20073862 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000457069.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-009"; exon_number 2; exon_id "ENSE00001767557.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000319850.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6068 chr22 HAVANA CDS 20073487 20073862 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000457069.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-009"; exon_number 2; exon_id "ENSE00001767557.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000319850.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6069 chr22 HAVANA start_codon 20073487 20073489 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000457069.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-009"; exon_number 2; exon_id "ENSE00001767557.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000319850.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6070 chr22 HAVANA UTR 20068092 20068208 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000457069.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000319850.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6071 chr22 HAVANA UTR 20073210 20073486 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000457069.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000319850.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6072 chr22 HAVANA transcript 20073343 20099395 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495826.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-002"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6073 chr22 HAVANA exon 20073343 20074844 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495826.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-002"; exon_number 1; exon_id "ENSE00001907613.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6074 chr22 HAVANA exon 20077192 20077334 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495826.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-002"; exon_number 2; exon_id "ENSE00003472025.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6075 chr22 HAVANA exon 20077499 20077781 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495826.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-002"; exon_number 3; exon_id "ENSE00003594983.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6076 chr22 HAVANA exon 20078958 20079155 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495826.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-002"; exon_number 4; exon_id "ENSE00003692977.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6077 chr22 HAVANA exon 20079392 20079493 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495826.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-002"; exon_number 5; exon_id "ENSE00003672247.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6078 chr22 HAVANA exon 20080332 20080430 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495826.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-002"; exon_number 6; exon_id "ENSE00003464859.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6079 chr22 HAVANA exon 20082236 20082318 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495826.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-002"; exon_number 7; exon_id "ENSE00003520140.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6080 chr22 HAVANA exon 20093700 20093800 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495826.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-002"; exon_number 8; exon_id "ENSE00003585315.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6081 chr22 HAVANA exon 20094115 20094208 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495826.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-002"; exon_number 9; exon_id "ENSE00001879515.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6082 chr22 HAVANA exon 20094794 20094921 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495826.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-002"; exon_number 10; exon_id "ENSE00003662653.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6083 chr22 HAVANA exon 20096413 20096526 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495826.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-002"; exon_number 11; exon_id "ENSE00003621286.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6084 chr22 HAVANA exon 20097548 20099395 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495826.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-002"; exon_number 12; exon_id "ENSE00003508878.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6085 chr22 HAVANA transcript 20073345 20099395 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6086 chr22 HAVANA exon 20073345 20074206 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 1; exon_id "ENSE00001554283.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6087 chr22 HAVANA CDS 20073487 20074206 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 1; exon_id "ENSE00001554283.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6088 chr22 HAVANA start_codon 20073487 20073489 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 1; exon_id "ENSE00001554283.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6089 chr22 HAVANA exon 20074685 20074844 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 2; exon_id "ENSE00001056489.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6090 chr22 HAVANA CDS 20074685 20074844 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 2; exon_id "ENSE00001056489.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6091 chr22 HAVANA exon 20077192 20077334 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 3; exon_id "ENSE00003517899.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6092 chr22 HAVANA CDS 20077192 20077334 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 3; exon_id "ENSE00003517899.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6093 chr22 HAVANA exon 20077499 20077781 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 4; exon_id "ENSE00003561981.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6094 chr22 HAVANA CDS 20077499 20077781 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 4; exon_id "ENSE00003561981.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6095 chr22 HAVANA exon 20078958 20079155 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 5; exon_id "ENSE00003622027.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6096 chr22 HAVANA CDS 20078958 20079155 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 5; exon_id "ENSE00003622027.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6097 chr22 HAVANA exon 20079392 20079493 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 6; exon_id "ENSE00003545395.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6098 chr22 HAVANA CDS 20079392 20079493 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 6; exon_id "ENSE00003545395.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6099 chr22 HAVANA exon 20082236 20082318 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 7; exon_id "ENSE00003570746.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6100 chr22 HAVANA CDS 20082236 20082318 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 7; exon_id "ENSE00003570746.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6101 chr22 HAVANA exon 20093700 20093800 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 8; exon_id "ENSE00003489431.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6102 chr22 HAVANA CDS 20093700 20093800 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 8; exon_id "ENSE00003489431.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6103 chr22 HAVANA exon 20094115 20094221 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 9; exon_id "ENSE00003630574.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6104 chr22 HAVANA CDS 20094115 20094221 . + 1 gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 9; exon_id "ENSE00003630574.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6105 chr22 HAVANA exon 20094794 20094921 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 10; exon_id "ENSE00003532312.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6106 chr22 HAVANA CDS 20094794 20094921 . + 2 gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 10; exon_id "ENSE00003532312.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6107 chr22 HAVANA exon 20096413 20096526 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 11; exon_id "ENSE00003671712.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6108 chr22 HAVANA CDS 20096413 20096526 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 11; exon_id "ENSE00003671712.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6109 chr22 HAVANA exon 20097548 20099395 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 12; exon_id "ENSE00003493614.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6110 chr22 HAVANA CDS 20097548 20097628 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 12; exon_id "ENSE00003493614.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6111 chr22 HAVANA stop_codon 20097629 20097631 . + 0 gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; exon_number 12; exon_id "ENSE00003493614.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6112 chr22 HAVANA UTR 20073345 20073486 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6113 chr22 HAVANA UTR 20097629 20099395 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000407755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR8-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54501.1"; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6114 chr22 HAVANA transcript 20074559 20099400 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000498171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-004"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318657.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6115 chr22 HAVANA exon 20074559 20074844 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000498171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-004"; exon_number 1; exon_id "ENSE00001821564.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318657.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6116 chr22 HAVANA exon 20077192 20077781 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000498171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-004"; exon_number 2; exon_id "ENSE00001882844.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318657.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6117 chr22 HAVANA exon 20078958 20079155 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000498171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-004"; exon_number 3; exon_id "ENSE00003692977.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318657.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6118 chr22 HAVANA exon 20079392 20079493 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000498171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-004"; exon_number 4; exon_id "ENSE00003672247.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318657.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6119 chr22 HAVANA exon 20080332 20080430 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000498171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-004"; exon_number 5; exon_id "ENSE00003464859.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318657.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6120 chr22 HAVANA exon 20082236 20082318 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000498171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-004"; exon_number 6; exon_id "ENSE00003520140.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318657.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6121 chr22 HAVANA exon 20093700 20093800 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000498171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-004"; exon_number 7; exon_id "ENSE00003585315.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318657.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6122 chr22 HAVANA exon 20094115 20094221 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000498171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-004"; exon_number 8; exon_id "ENSE00003591246.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318657.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6123 chr22 HAVANA exon 20094794 20094921 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000498171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-004"; exon_number 9; exon_id "ENSE00003662653.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318657.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6124 chr22 HAVANA exon 20096413 20096526 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000498171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-004"; exon_number 10; exon_id "ENSE00003621286.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318657.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6125 chr22 HAVANA exon 20097548 20099400 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000498171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-004"; exon_number 11; exon_id "ENSE00001877837.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318657.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6126 chr22 HAVANA transcript 20082235 20094559 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000491892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-007"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318660.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6127 chr22 HAVANA exon 20082235 20082318 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000491892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-007"; exon_number 1; exon_id "ENSE00001874109.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318660.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6128 chr22 HAVANA exon 20093700 20093800 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000491892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-007"; exon_number 2; exon_id "ENSE00003585315.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318660.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6129 chr22 HAVANA exon 20094115 20094559 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000491892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-007"; exon_number 3; exon_id "ENSE00001833117.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318660.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6130 chr22 HAVANA transcript 20093705 20095098 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495351.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-005"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318658.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6131 chr22 HAVANA exon 20093705 20093800 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495351.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-005"; exon_number 1; exon_id "ENSE00001839447.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318658.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6132 chr22 HAVANA exon 20094115 20094221 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495351.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-005"; exon_number 2; exon_id "ENSE00003591246.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318658.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6133 chr22 HAVANA exon 20094794 20095098 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000495351.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-005"; exon_number 3; exon_id "ENSE00001946017.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318658.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6134 chr22 HAVANA transcript 20094090 20096707 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000485802.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-006"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318659.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6135 chr22 HAVANA exon 20094090 20094221 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000485802.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-006"; exon_number 1; exon_id "ENSE00001829294.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318659.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6136 chr22 HAVANA exon 20094794 20094921 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000485802.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-006"; exon_number 2; exon_id "ENSE00003662653.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318659.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6137 chr22 HAVANA exon 20096413 20096707 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000485802.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-006"; exon_number 3; exon_id "ENSE00001925194.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000318659.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6138 chr22 HAVANA transcript 20095095 20098784 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000475941.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-008"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000319849.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6139 chr22 HAVANA exon 20095095 20096526 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000475941.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-008"; exon_number 1; exon_id "ENSE00001954876.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000319849.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6140 chr22 HAVANA exon 20097548 20098784 . + . gene_id "ENSG00000128191.9"; transcript_id "ENST00000475941.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DGCR8-008"; exon_number 2; exon_id "ENSE00001884365.1"; level 2; havana_gene "OTTHUMG00000150503.2"; havana_transcript "OTTHUMT00000319849.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6141 chr22 ENSEMBL gene 20073269 20073356 . + . gene_id "ENSG00000266567.1"; transcript_id "ENSG00000266567.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR3618"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR3618"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6142 chr22 ENSEMBL transcript 20073269 20073356 . + . gene_id "ENSG00000266567.1"; transcript_id "ENST00000580330.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR3618"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR3618-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6143 chr22 ENSEMBL exon 20073269 20073356 . + . gene_id "ENSG00000266567.1"; transcript_id "ENST00000580330.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR3618"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR3618-201"; exon_number 1; exon_id "ENSE00002717242.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6144 chr22 ENSEMBL gene 20073581 20073665 . + . gene_id "ENSG00000221366.1"; transcript_id "ENSG00000221366.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR1306"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR1306"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6145 chr22 ENSEMBL transcript 20073581 20073665 . + . gene_id "ENSG00000221366.1"; transcript_id "ENST00000408439.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR1306"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR1306-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6146 chr22 ENSEMBL exon 20073581 20073665 . + . gene_id "ENSG00000221366.1"; transcript_id "ENST00000408439.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR1306"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR1306-201"; exon_number 1; exon_id "ENSE00001565074.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6147 chr22 HAVANA gene 20098344 20099398 . - . gene_id "ENSG00000243762.1"; transcript_id "ENSG00000243762.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.8"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AC006547.8"; level 2; havana_gene "OTTHUMG00000150489.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6148 chr22 HAVANA transcript 20098344 20099398 . - . gene_id "ENSG00000243762.1"; transcript_id "ENST00000412713.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.8"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.8-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150489.2"; havana_transcript "OTTHUMT00000318391.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6149 chr22 HAVANA exon 20099312 20099398 . - . gene_id "ENSG00000243762.1"; transcript_id "ENST00000412713.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.8"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.8-001"; exon_number 1; exon_id "ENSE00001601747.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150489.2"; havana_transcript "OTTHUMT00000318391.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6150 chr22 HAVANA exon 20098344 20098782 . - . gene_id "ENSG00000243762.1"; transcript_id "ENST00000412713.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC006547.8"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC006547.8-001"; exon_number 2; exon_id "ENSE00001705775.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150489.2"; havana_transcript "OTTHUMT00000318391.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6151 chr22 HAVANA gene 20099389 20104915 . - . gene_id "ENSG00000099899.10"; transcript_id "ENSG00000099899.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A"; level 2; havana_gene "OTTHUMG00000150454.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6152 chr22 HAVANA transcript 20099389 20104818 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6153 chr22 HAVANA exon 20104406 20104818 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 1; exon_id "ENSE00001873673.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6154 chr22 HAVANA CDS 20104406 20104429 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 1; exon_id "ENSE00001873673.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6155 chr22 HAVANA start_codon 20104427 20104429 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 1; exon_id "ENSE00001873673.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6156 chr22 HAVANA exon 20103561 20104135 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 2; exon_id "ENSE00003689279.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6157 chr22 HAVANA CDS 20103561 20104135 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 2; exon_id "ENSE00003689279.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6158 chr22 HAVANA exon 20103195 20103303 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 3; exon_id "ENSE00003531490.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6159 chr22 HAVANA CDS 20103195 20103303 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 3; exon_id "ENSE00003531490.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6160 chr22 HAVANA exon 20102789 20102970 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 4; exon_id "ENSE00003681824.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6161 chr22 HAVANA CDS 20102789 20102970 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 4; exon_id "ENSE00003681824.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6162 chr22 HAVANA exon 20102488 20102602 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 5; exon_id "ENSE00003622657.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6163 chr22 HAVANA CDS 20102488 20102602 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 5; exon_id "ENSE00003622657.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6164 chr22 HAVANA exon 20102284 20102399 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 6; exon_id "ENSE00003481680.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6165 chr22 HAVANA CDS 20102284 20102399 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 6; exon_id "ENSE00003481680.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6166 chr22 HAVANA exon 20102097 20102208 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 7; exon_id "ENSE00003490094.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6167 chr22 HAVANA CDS 20102097 20102208 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 7; exon_id "ENSE00003490094.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6168 chr22 HAVANA exon 20101209 20101331 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 8; exon_id "ENSE00003597523.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6169 chr22 HAVANA CDS 20101209 20101331 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 8; exon_id "ENSE00003597523.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6170 chr22 HAVANA exon 20100955 20101030 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 9; exon_id "ENSE00003527953.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6171 chr22 HAVANA CDS 20100955 20101030 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 9; exon_id "ENSE00003527953.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6172 chr22 HAVANA exon 20100641 20100757 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 10; exon_id "ENSE00003628675.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6173 chr22 HAVANA CDS 20100641 20100757 . - 2 gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 10; exon_id "ENSE00003628675.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6174 chr22 HAVANA exon 20100434 20100530 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 11; exon_id "ENSE00003546813.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6175 chr22 HAVANA CDS 20100434 20100530 . - 2 gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 11; exon_id "ENSE00003546813.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6176 chr22 HAVANA exon 20099389 20100317 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 12; exon_id "ENSE00001820021.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6177 chr22 HAVANA CDS 20100089 20100317 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 12; exon_id "ENSE00001820021.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6178 chr22 HAVANA stop_codon 20100086 20100088 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; exon_number 12; exon_id "ENSE00001820021.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6179 chr22 HAVANA UTR 20104430 20104818 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6180 chr22 HAVANA UTR 20099389 20100088 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000252136.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318168.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6181 chr22 HAVANA transcript 20099398 20104915 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6182 chr22 HAVANA exon 20104620 20104915 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 1; exon_id "ENSE00001840215.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6183 chr22 HAVANA exon 20104406 20104495 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 2; exon_id "ENSE00003558150.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6184 chr22 HAVANA CDS 20104406 20104429 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 2; exon_id "ENSE00003558150.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6185 chr22 HAVANA start_codon 20104427 20104429 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 2; exon_id "ENSE00003558150.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6186 chr22 HAVANA exon 20103561 20104135 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 3; exon_id "ENSE00003689279.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6187 chr22 HAVANA CDS 20103561 20104135 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 3; exon_id "ENSE00003689279.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6188 chr22 HAVANA exon 20103195 20103303 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 4; exon_id "ENSE00003531490.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6189 chr22 HAVANA CDS 20103195 20103303 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 4; exon_id "ENSE00003531490.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6190 chr22 HAVANA exon 20102789 20102970 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 5; exon_id "ENSE00003681824.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6191 chr22 HAVANA CDS 20102789 20102970 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 5; exon_id "ENSE00003681824.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6192 chr22 HAVANA exon 20102488 20102602 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 6; exon_id "ENSE00003622657.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6193 chr22 HAVANA CDS 20102488 20102602 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 6; exon_id "ENSE00003622657.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6194 chr22 HAVANA exon 20102284 20102399 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 7; exon_id "ENSE00003481680.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6195 chr22 HAVANA CDS 20102284 20102399 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 7; exon_id "ENSE00003481680.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6196 chr22 HAVANA exon 20102097 20102208 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 8; exon_id "ENSE00003490094.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6197 chr22 HAVANA CDS 20102097 20102208 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 8; exon_id "ENSE00003490094.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6198 chr22 HAVANA exon 20101209 20101331 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 9; exon_id "ENSE00003597523.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6199 chr22 HAVANA CDS 20101209 20101331 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 9; exon_id "ENSE00003597523.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6200 chr22 HAVANA exon 20100955 20101030 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 10; exon_id "ENSE00003527953.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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6201 chr22 HAVANA CDS 20100955 20101030 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 10; exon_id "ENSE00003527953.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6202 chr22 HAVANA exon 20100641 20100757 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 11; exon_id "ENSE00003628675.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6203 chr22 HAVANA CDS 20100641 20100757 . - 2 gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 11; exon_id "ENSE00003628675.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6204 chr22 HAVANA exon 20100434 20100530 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 12; exon_id "ENSE00003546813.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6205 chr22 HAVANA CDS 20100434 20100530 . - 2 gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 12; exon_id "ENSE00003546813.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
6206 chr22 HAVANA exon 20099398 20100317 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 13; exon_id "ENSE00001191993.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6207 chr22 HAVANA CDS 20100089 20100317 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 13; exon_id "ENSE00001191993.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6208 chr22 HAVANA stop_codon 20100086 20100088 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; exon_number 13; exon_id "ENSE00001191993.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6209 chr22 HAVANA UTR 20104620 20104915 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6210 chr22 HAVANA UTR 20104430 20104495 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6211 chr22 HAVANA UTR 20099398 20100088 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000403707.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-005"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13774.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6212 chr22 HAVANA transcript 20099824 20100701 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000480339.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-015"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318347.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6213 chr22 HAVANA exon 20100434 20100701 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000480339.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-015"; exon_number 1; exon_id "ENSE00001827648.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318347.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6214 chr22 HAVANA exon 20099824 20100317 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000480339.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-015"; exon_number 2; exon_id "ENSE00003675576.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318347.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6215 chr22 HAVANA transcript 20099824 20101030 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000444845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-016"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318348.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6216 chr22 HAVANA exon 20100955 20101030 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000444845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-016"; exon_number 1; exon_id "ENSE00003527953.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318348.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6217 chr22 HAVANA CDS 20100955 20101030 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000444845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-016"; exon_number 1; exon_id "ENSE00003527953.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318348.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6218 chr22 HAVANA exon 20100641 20100757 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000444845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-016"; exon_number 2; exon_id "ENSE00003628675.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318348.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6219 chr22 HAVANA CDS 20100641 20100757 . - 2 gene_id "ENSG00000099899.10"; transcript_id "ENST00000444845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-016"; exon_number 2; exon_id "ENSE00003628675.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318348.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6220 chr22 HAVANA exon 20100479 20100530 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000444845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-016"; exon_number 3; exon_id "ENSE00001794300.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318348.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6221 chr22 HAVANA CDS 20100479 20100530 . - 2 gene_id "ENSG00000099899.10"; transcript_id "ENST00000444845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-016"; exon_number 3; exon_id "ENSE00001794300.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318348.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6222 chr22 HAVANA exon 20099824 20100317 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000444845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-016"; exon_number 4; exon_id "ENSE00003569198.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318348.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6223 chr22 HAVANA CDS 20100089 20100317 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000444845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-016"; exon_number 4; exon_id "ENSE00003569198.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318348.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6224 chr22 HAVANA stop_codon 20100086 20100088 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000444845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-016"; exon_number 4; exon_id "ENSE00003569198.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318348.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6225 chr22 HAVANA UTR 20099824 20100088 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000444845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-016"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318348.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6226 chr22 HAVANA transcript 20099827 20104768 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6227 chr22 HAVANA exon 20104406 20104768 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 1; exon_id "ENSE00001416832.2"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6228 chr22 HAVANA CDS 20104406 20104429 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 1; exon_id "ENSE00001416832.2"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6229 chr22 HAVANA start_codon 20104427 20104429 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 1; exon_id "ENSE00001416832.2"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6230 chr22 HAVANA exon 20103561 20104135 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 2; exon_id "ENSE00003689279.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6231 chr22 HAVANA CDS 20103561 20104135 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 2; exon_id "ENSE00003689279.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6232 chr22 HAVANA exon 20103195 20103303 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 3; exon_id "ENSE00003531490.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6233 chr22 HAVANA CDS 20103195 20103303 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 3; exon_id "ENSE00003531490.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6234 chr22 HAVANA exon 20102789 20102970 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 4; exon_id "ENSE00003681824.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6235 chr22 HAVANA CDS 20102789 20102970 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 4; exon_id "ENSE00003681824.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6236 chr22 HAVANA exon 20102488 20102602 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 5; exon_id "ENSE00003622657.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6237 chr22 HAVANA CDS 20102488 20102602 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 5; exon_id "ENSE00003622657.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6238 chr22 HAVANA exon 20102284 20102399 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 6; exon_id "ENSE00003481680.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
6239 chr22 HAVANA CDS 20102284 20102399 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 6; exon_id "ENSE00003481680.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6240 chr22 HAVANA exon 20102097 20102208 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 7; exon_id "ENSE00003490094.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6241 chr22 HAVANA CDS 20102097 20102208 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 7; exon_id "ENSE00003490094.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6242 chr22 HAVANA exon 20101209 20101331 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 8; exon_id "ENSE00003597523.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6243 chr22 HAVANA CDS 20101209 20101331 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 8; exon_id "ENSE00003597523.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6244 chr22 HAVANA exon 20100955 20101030 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 9; exon_id "ENSE00003527953.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6245 chr22 HAVANA CDS 20100955 20101030 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 9; exon_id "ENSE00003527953.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6246 chr22 HAVANA exon 20100641 20100757 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 10; exon_id "ENSE00003628675.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6247 chr22 HAVANA CDS 20100641 20100757 . - 2 gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 10; exon_id "ENSE00003628675.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6248 chr22 HAVANA exon 20100434 20100530 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 11; exon_id "ENSE00003546813.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6249 chr22 HAVANA CDS 20100434 20100530 . - 2 gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 11; exon_id "ENSE00003546813.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6250 chr22 HAVANA exon 20099827 20100339 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 12; exon_id "ENSE00001645734.2"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6251 chr22 HAVANA CDS 20100300 20100339 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 12; exon_id "ENSE00001645734.2"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6252 chr22 HAVANA stop_codon 20100297 20100299 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; exon_number 12; exon_id "ENSE00001645734.2"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6253 chr22 HAVANA UTR 20104430 20104768 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6254 chr22 HAVANA UTR 20099827 20100299 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000404751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRMT2A-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS58793.1"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6255 chr22 HAVANA transcript 20099851 20101321 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000487668.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-017"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318349.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6256 chr22 HAVANA exon 20101209 20101321 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000487668.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-017"; exon_number 1; exon_id "ENSE00001910663.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318349.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6257 chr22 HAVANA exon 20100955 20101084 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000487668.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-017"; exon_number 2; exon_id "ENSE00003539866.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318349.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6258 chr22 HAVANA exon 20100641 20100757 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000487668.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-017"; exon_number 3; exon_id "ENSE00003619557.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318349.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6259 chr22 HAVANA exon 20099851 20100530 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000487668.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-017"; exon_number 4; exon_id "ENSE00001895874.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318349.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6260 chr22 HAVANA transcript 20099861 20104745 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6261 chr22 HAVANA exon 20104406 20104745 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 1; exon_id "ENSE00001930495.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6262 chr22 HAVANA CDS 20104406 20104429 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 1; exon_id "ENSE00001930495.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6263 chr22 HAVANA start_codon 20104427 20104429 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 1; exon_id "ENSE00001930495.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6264 chr22 HAVANA exon 20103561 20104135 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 2; exon_id "ENSE00003689279.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6265 chr22 HAVANA CDS 20103561 20104135 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 2; exon_id "ENSE00003689279.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6266 chr22 HAVANA exon 20103195 20103303 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 3; exon_id "ENSE00003531490.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6267 chr22 HAVANA CDS 20103195 20103303 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 3; exon_id "ENSE00003531490.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6268 chr22 HAVANA exon 20102789 20102970 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 4; exon_id "ENSE00003681824.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6269 chr22 HAVANA CDS 20102789 20102970 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 4; exon_id "ENSE00003681824.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6270 chr22 HAVANA exon 20102488 20102602 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 5; exon_id "ENSE00003622657.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6271 chr22 HAVANA CDS 20102488 20102602 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 5; exon_id "ENSE00003622657.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6272 chr22 HAVANA exon 20102284 20102399 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 6; exon_id "ENSE00003481680.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6273 chr22 HAVANA CDS 20102284 20102399 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 6; exon_id "ENSE00003481680.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6274 chr22 HAVANA exon 20102097 20102208 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 7; exon_id "ENSE00003490094.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6275 chr22 HAVANA CDS 20102097 20102208 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 7; exon_id "ENSE00003490094.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6276 chr22 HAVANA exon 20101209 20101331 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 8; exon_id "ENSE00003597523.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6277 chr22 HAVANA CDS 20101209 20101331 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 8; exon_id "ENSE00003597523.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6278 chr22 HAVANA exon 20100955 20101084 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 9; exon_id "ENSE00003591949.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6279 chr22 HAVANA CDS 20100955 20101084 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 9; exon_id "ENSE00003591949.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6280 chr22 HAVANA exon 20100641 20100757 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 10; exon_id "ENSE00003628675.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6281 chr22 HAVANA CDS 20100641 20100757 . - 2 gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 10; exon_id "ENSE00003628675.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6282 chr22 HAVANA exon 20100434 20100530 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 11; exon_id "ENSE00003546813.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6283 chr22 HAVANA CDS 20100434 20100530 . - 2 gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 11; exon_id "ENSE00003546813.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6284 chr22 HAVANA exon 20099861 20100317 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 12; exon_id "ENSE00001954000.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6285 chr22 HAVANA CDS 20100089 20100317 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 12; exon_id "ENSE00001954000.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6286 chr22 HAVANA stop_codon 20100086 20100088 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; exon_number 12; exon_id "ENSE00001954000.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6287 chr22 HAVANA UTR 20104430 20104745 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6288 chr22 HAVANA UTR 20099861 20100088 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000439169.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6289 chr22 HAVANA transcript 20100022 20100901 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000487378.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-014"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318346.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6290 chr22 HAVANA exon 20100641 20100901 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000487378.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-014"; exon_number 1; exon_id "ENSE00001931405.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318346.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6291 chr22 HAVANA exon 20100434 20100530 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000487378.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-014"; exon_number 2; exon_id "ENSE00003460879.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318346.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6292 chr22 HAVANA exon 20100022 20100317 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000487378.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-014"; exon_number 3; exon_id "ENSE00001907071.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318346.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6293 chr22 HAVANA transcript 20100091 20101331 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000444256.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-019"; level 2; tag "not_organism_supported"; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318390.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6294 chr22 HAVANA exon 20101209 20101331 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000444256.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-019"; exon_number 1; exon_id "ENSE00003651826.1"; level 2; tag "not_organism_supported"; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318390.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6295 chr22 HAVANA CDS 20101209 20101331 . - 2 gene_id "ENSG00000099899.10"; transcript_id "ENST00000444256.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-019"; exon_number 1; exon_id "ENSE00003651826.1"; level 2; tag "not_organism_supported"; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318390.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6296 chr22 HAVANA exon 20100955 20101030 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000444256.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-019"; exon_number 2; exon_id "ENSE00003667646.1"; level 2; tag "not_organism_supported"; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318390.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6297 chr22 HAVANA CDS 20100955 20101030 . - 2 gene_id "ENSG00000099899.10"; transcript_id "ENST00000444256.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-019"; exon_number 2; exon_id "ENSE00003667646.1"; level 2; tag "not_organism_supported"; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318390.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6298 chr22 HAVANA exon 20100091 20100317 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000444256.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-019"; exon_number 3; exon_id "ENSE00001564684.2"; level 2; tag "not_organism_supported"; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318390.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6299 chr22 HAVANA CDS 20100091 20100317 . - 1 gene_id "ENSG00000099899.10"; transcript_id "ENST00000444256.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRMT2A-019"; exon_number 3; exon_id "ENSE00001564684.2"; level 2; tag "not_organism_supported"; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318390.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6300 chr22 HAVANA transcript 20100415 20103335 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000494820.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-010"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6301 chr22 HAVANA exon 20103195 20103335 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000494820.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-010"; exon_number 1; exon_id "ENSE00001925321.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6302 chr22 HAVANA exon 20102789 20102970 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000494820.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-010"; exon_number 2; exon_id "ENSE00003691847.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6303 chr22 HAVANA exon 20102488 20102602 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000494820.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-010"; exon_number 3; exon_id "ENSE00003617583.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6304 chr22 HAVANA exon 20102284 20102399 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000494820.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-010"; exon_number 4; exon_id "ENSE00003606102.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6305 chr22 HAVANA exon 20102097 20102208 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000494820.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-010"; exon_number 5; exon_id "ENSE00003511559.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6306 chr22 HAVANA exon 20101209 20101331 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000494820.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-010"; exon_number 6; exon_id "ENSE00003541234.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6307 chr22 HAVANA exon 20100955 20101030 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000494820.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-010"; exon_number 7; exon_id "ENSE00003666644.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6308 chr22 HAVANA exon 20100641 20100757 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000494820.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-010"; exon_number 8; exon_id "ENSE00003619557.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6309 chr22 HAVANA exon 20100415 20100530 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000494820.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-010"; exon_number 9; exon_id "ENSE00001865369.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6310 chr22 HAVANA transcript 20100641 20103211 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000492988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TRMT2A-021"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000319847.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6311 chr22 HAVANA exon 20103195 20103211 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000492988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TRMT2A-021"; exon_number 1; exon_id "ENSE00001924333.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000319847.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6312 chr22 HAVANA exon 20102789 20102970 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000492988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TRMT2A-021"; exon_number 2; exon_id "ENSE00003691847.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000319847.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6313 chr22 HAVANA exon 20102488 20102602 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000492988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TRMT2A-021"; exon_number 3; exon_id "ENSE00003617583.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000319847.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6314 chr22 HAVANA exon 20102284 20102399 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000492988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TRMT2A-021"; exon_number 4; exon_id "ENSE00003606102.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000319847.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6315 chr22 HAVANA exon 20102097 20102204 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000492988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TRMT2A-021"; exon_number 5; exon_id "ENSE00001909533.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000319847.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6316 chr22 HAVANA exon 20101209 20101331 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000492988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TRMT2A-021"; exon_number 6; exon_id "ENSE00003541234.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000319847.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6317 chr22 HAVANA exon 20100955 20101030 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000492988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TRMT2A-021"; exon_number 7; exon_id "ENSE00003666644.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000319847.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6318 chr22 HAVANA exon 20100641 20100757 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000492988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TRMT2A-021"; exon_number 8; exon_id "ENSE00003619557.1"; level 2; tag "not_organism_supported"; tag "basic"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000319847.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6319 chr22 HAVANA transcript 20101009 20102962 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000471040.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-013"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318318.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6320 chr22 HAVANA exon 20102488 20102962 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000471040.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-013"; exon_number 1; exon_id "ENSE00001848620.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318318.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6321 chr22 HAVANA exon 20102284 20102399 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000471040.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-013"; exon_number 2; exon_id "ENSE00003606102.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318318.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6322 chr22 HAVANA exon 20102097 20102208 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000471040.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-013"; exon_number 3; exon_id "ENSE00003511559.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318318.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6323 chr22 HAVANA exon 20101209 20101331 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000471040.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-013"; exon_number 4; exon_id "ENSE00003541234.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318318.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6324 chr22 HAVANA exon 20101009 20101030 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000471040.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-013"; exon_number 5; exon_id "ENSE00001846987.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318318.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6325 chr22 HAVANA transcript 20101173 20102391 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000488335.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-018"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318350.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6326 chr22 HAVANA exon 20102284 20102391 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000488335.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-018"; exon_number 1; exon_id "ENSE00001867206.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318350.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6327 chr22 HAVANA exon 20102097 20102208 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000488335.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-018"; exon_number 2; exon_id "ENSE00003511559.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318350.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6328 chr22 HAVANA exon 20101173 20101331 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000488335.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-018"; exon_number 3; exon_id "ENSE00001938771.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318350.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6329 chr22 HAVANA transcript 20101227 20102915 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000463710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-012"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318317.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6330 chr22 HAVANA exon 20102488 20102915 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000463710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-012"; exon_number 1; exon_id "ENSE00001819234.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318317.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6331 chr22 HAVANA exon 20102284 20102399 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000463710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-012"; exon_number 2; exon_id "ENSE00003606102.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318317.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6332 chr22 HAVANA exon 20102097 20102204 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000463710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-012"; exon_number 3; exon_id "ENSE00001909533.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318317.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6333 chr22 HAVANA exon 20101227 20101331 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000463710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-012"; exon_number 4; exon_id "ENSE00001851212.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318317.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6334 chr22 HAVANA transcript 20102290 20103145 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000459644.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-011"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6335 chr22 HAVANA exon 20102789 20103145 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000459644.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-011"; exon_number 1; exon_id "ENSE00001809594.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6336 chr22 HAVANA exon 20102488 20102602 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000459644.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-011"; exon_number 2; exon_id "ENSE00003617583.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6337 chr22 HAVANA exon 20102290 20102399 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000459644.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-011"; exon_number 3; exon_id "ENSE00001888375.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6338 chr22 HAVANA transcript 20102860 20104073 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000468917.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-008"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6339 chr22 HAVANA exon 20103561 20104073 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000468917.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-008"; exon_number 1; exon_id "ENSE00001958583.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6340 chr22 HAVANA exon 20102860 20103303 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000468917.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-008"; exon_number 2; exon_id "ENSE00001876739.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6341 chr22 HAVANA transcript 20102872 20103623 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000480460.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-009"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318296.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6342 chr22 HAVANA exon 20103561 20103623 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000480460.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-009"; exon_number 1; exon_id "ENSE00001855831.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318296.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6343 chr22 HAVANA exon 20103195 20103303 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000480460.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-009"; exon_number 2; exon_id "ENSE00003648396.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318296.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6344 chr22 HAVANA exon 20102872 20103077 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000480460.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-009"; exon_number 3; exon_id "ENSE00001908538.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318296.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6345 chr22 HAVANA transcript 20103100 20104706 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000494641.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-007"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318253.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6346 chr22 HAVANA exon 20104406 20104706 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000494641.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-007"; exon_number 1; exon_id "ENSE00001953732.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318253.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6347 chr22 HAVANA exon 20103581 20104135 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000494641.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-007"; exon_number 2; exon_id "ENSE00001947444.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318253.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6348 chr22 HAVANA exon 20103100 20103303 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000494641.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-007"; exon_number 3; exon_id "ENSE00001943888.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318253.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6349 chr22 HAVANA transcript 20103133 20104726 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000464535.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-020"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000319846.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6350 chr22 HAVANA exon 20104620 20104726 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000464535.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-020"; exon_number 1; exon_id "ENSE00001558852.3"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000319846.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6351 chr22 HAVANA exon 20104406 20104495 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000464535.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-020"; exon_number 2; exon_id "ENSE00003610494.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000319846.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6352 chr22 HAVANA exon 20103561 20104135 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000464535.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-020"; exon_number 3; exon_id "ENSE00003462218.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000319846.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6353 chr22 HAVANA exon 20103133 20103303 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000464535.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRMT2A-020"; exon_number 4; exon_id "ENSE00001932991.1"; level 2; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000319846.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6354 chr22 HAVANA transcript 20103765 20104762 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000445045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6355 chr22 HAVANA exon 20104552 20104762 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000445045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-006"; exon_number 1; exon_id "ENSE00001613444.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6356 chr22 HAVANA exon 20103765 20104135 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000445045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-006"; exon_number 2; exon_id "ENSE00001799943.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6357 chr22 HAVANA CDS 20103765 20104123 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000445045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-006"; exon_number 2; exon_id "ENSE00001799943.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6358 chr22 HAVANA start_codon 20104121 20104123 . - 0 gene_id "ENSG00000099899.10"; transcript_id "ENST00000445045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-006"; exon_number 2; exon_id "ENSE00001799943.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6359 chr22 HAVANA UTR 20104552 20104762 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000445045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6360 chr22 HAVANA UTR 20104124 20104135 . - . gene_id "ENSG00000099899.10"; transcript_id "ENST00000445045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRMT2A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TRMT2A-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150454.9"; havana_transcript "OTTHUMT00000318252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6361 chr22 HAVANA gene 20103461 20114878 . + . gene_id "ENSG00000099901.12"; transcript_id "ENSG00000099901.12"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1"; level 1; tag "ncRNA_host"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6362 chr22 HAVANA transcript 20103461 20109900 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000432879.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-004"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318487.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6363 chr22 HAVANA exon 20103461 20103953 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000432879.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-004"; exon_number 1; exon_id "ENSE00001806057.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318487.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6364 chr22 HAVANA CDS 20103708 20103953 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000432879.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-004"; exon_number 1; exon_id "ENSE00001806057.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318487.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6365 chr22 HAVANA start_codon 20103708 20103710 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000432879.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-004"; exon_number 1; exon_id "ENSE00001806057.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318487.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6366 chr22 HAVANA exon 20106536 20106672 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000432879.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-004"; exon_number 2; exon_id "ENSE00003568790.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318487.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6367 chr22 HAVANA CDS 20106536 20106672 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000432879.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-004"; exon_number 2; exon_id "ENSE00003568790.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318487.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6368 chr22 HAVANA exon 20109787 20109900 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000432879.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-004"; exon_number 3; exon_id "ENSE00001760568.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318487.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6369 chr22 HAVANA CDS 20109787 20109900 . + 1 gene_id "ENSG00000099901.12"; transcript_id "ENST00000432879.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-004"; exon_number 3; exon_id "ENSE00001760568.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318487.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6370 chr22 HAVANA UTR 20103461 20103707 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000432879.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-004"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318487.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6371 chr22 HAVANA transcript 20103461 20114704 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6372 chr22 HAVANA exon 20103461 20103918 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; exon_number 1; exon_id "ENSE00003572643.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6373 chr22 HAVANA CDS 20103708 20103918 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; exon_number 1; exon_id "ENSE00003572643.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6374 chr22 HAVANA start_codon 20103708 20103710 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; exon_number 1; exon_id "ENSE00003572643.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6375 chr22 HAVANA exon 20106536 20106672 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; exon_number 2; exon_id "ENSE00003484104.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6376 chr22 HAVANA CDS 20106536 20106543 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; exon_number 2; exon_id "ENSE00003484104.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6377 chr22 HAVANA stop_codon 20106544 20106546 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; exon_number 2; exon_id "ENSE00003484104.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6378 chr22 HAVANA exon 20109787 20109944 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; exon_number 3; exon_id "ENSE00003543626.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6379 chr22 HAVANA exon 20110103 20110220 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; exon_number 4; exon_id "ENSE00003643150.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6380 chr22 HAVANA exon 20112831 20112959 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; exon_number 5; exon_id "ENSE00003484108.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6381 chr22 HAVANA exon 20113826 20114704 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; exon_number 6; exon_id "ENSE00003685120.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6382 chr22 HAVANA UTR 20103461 20103707 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6383 chr22 HAVANA UTR 20106544 20106672 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6384 chr22 HAVANA UTR 20109787 20109944 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6385 chr22 HAVANA UTR 20110103 20110220 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6386 chr22 HAVANA UTR 20112831 20112959 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6387 chr22 HAVANA UTR 20113826 20114704 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000435265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RANBP1-002"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318408.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6388 chr22 ENSEMBL transcript 20103461 20114704 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6389 chr22 ENSEMBL exon 20103461 20103918 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; exon_number 1; exon_id "ENSE00003674004.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6390 chr22 ENSEMBL exon 20106536 20106672 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; exon_number 2; exon_id "ENSE00003625829.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6391 chr22 ENSEMBL exon 20109787 20109944 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; exon_number 3; exon_id "ENSE00003543626.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6392 chr22 ENSEMBL exon 20110103 20110220 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; exon_number 4; exon_id "ENSE00003689252.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6393 chr22 ENSEMBL CDS 20110181 20110220 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; exon_number 4; exon_id "ENSE00003689252.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6394 chr22 ENSEMBL start_codon 20110181 20110183 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; exon_number 4; exon_id "ENSE00003689252.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6395 chr22 ENSEMBL exon 20112831 20112959 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; exon_number 5; exon_id "ENSE00003474469.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6396 chr22 ENSEMBL CDS 20112831 20112959 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; exon_number 5; exon_id "ENSE00003474469.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6397 chr22 ENSEMBL exon 20113826 20114704 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; exon_number 6; exon_id "ENSE00003642771.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6398 chr22 ENSEMBL CDS 20113826 20114199 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; exon_number 6; exon_id "ENSE00003642771.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6399 chr22 ENSEMBL stop_codon 20114200 20114202 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; exon_number 6; exon_id "ENSE00003642771.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6400 chr22 ENSEMBL UTR 20103461 20103918 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6401 chr22 ENSEMBL UTR 20106536 20106672 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6402 chr22 ENSEMBL UTR 20109787 20109944 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6403 chr22 ENSEMBL UTR 20110103 20110180 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6404 chr22 ENSEMBL UTR 20114200 20114704 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000430524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150490.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6405 chr22 HAVANA transcript 20104947 20114878 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6406 chr22 HAVANA exon 20104947 20105187 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; exon_number 1; exon_id "ENSE00001558800.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6407 chr22 HAVANA CDS 20105173 20105187 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; exon_number 1; exon_id "ENSE00001558800.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6408 chr22 HAVANA start_codon 20105173 20105175 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; exon_number 1; exon_id "ENSE00001558800.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6409 chr22 HAVANA exon 20106536 20106672 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; exon_number 2; exon_id "ENSE00003568790.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6410 chr22 HAVANA CDS 20106536 20106672 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; exon_number 2; exon_id "ENSE00003568790.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6411 chr22 HAVANA exon 20109787 20109944 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; exon_number 3; exon_id "ENSE00003557970.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6412 chr22 HAVANA CDS 20109787 20109944 . + 1 gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; exon_number 3; exon_id "ENSE00003557970.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6413 chr22 HAVANA exon 20112831 20112959 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; exon_number 4; exon_id "ENSE00003474469.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6414 chr22 HAVANA CDS 20112831 20112959 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; exon_number 4; exon_id "ENSE00003474469.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6415 chr22 HAVANA exon 20113826 20113891 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; exon_number 5; exon_id "ENSE00000650881.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6416 chr22 HAVANA CDS 20113826 20113891 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; exon_number 5; exon_id "ENSE00000650881.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6417 chr22 HAVANA exon 20114478 20114878 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; exon_number 6; exon_id "ENSE00001558864.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6418 chr22 HAVANA CDS 20114478 20114572 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; exon_number 6; exon_id "ENSE00001558864.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6419 chr22 HAVANA stop_codon 20114573 20114575 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; exon_number 6; exon_id "ENSE00001558864.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6420 chr22 HAVANA UTR 20104947 20105172 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6421 chr22 HAVANA UTR 20114573 20114878 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000402752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-001"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318392.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6422 chr22 HAVANA transcript 20105047 20110207 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000488484.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RANBP1-005"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6423 chr22 HAVANA exon 20105047 20105187 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000488484.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RANBP1-005"; exon_number 1; exon_id "ENSE00001932150.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6424 chr22 HAVANA exon 20106536 20106672 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000488484.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RANBP1-005"; exon_number 2; exon_id "ENSE00003625829.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6425 chr22 HAVANA exon 20109787 20110207 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000488484.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RANBP1-005"; exon_number 3; exon_id "ENSE00001932157.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318488.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6426 chr22 HAVANA transcript 20105071 20114704 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6427 chr22 HAVANA exon 20105071 20105187 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; exon_number 1; exon_id "ENSE00001953373.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6428 chr22 HAVANA CDS 20105173 20105187 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; exon_number 1; exon_id "ENSE00001953373.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6429 chr22 HAVANA start_codon 20105173 20105175 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; exon_number 1; exon_id "ENSE00001953373.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6430 chr22 HAVANA exon 20106536 20106672 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; exon_number 2; exon_id "ENSE00003568790.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6431 chr22 HAVANA CDS 20106536 20106672 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; exon_number 2; exon_id "ENSE00003568790.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6432 chr22 HAVANA exon 20109787 20109944 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; exon_number 3; exon_id "ENSE00003557970.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6433 chr22 HAVANA CDS 20109787 20109944 . + 1 gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; exon_number 3; exon_id "ENSE00003557970.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6434 chr22 HAVANA exon 20112831 20112959 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; exon_number 4; exon_id "ENSE00003474469.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6435 chr22 HAVANA CDS 20112831 20112959 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; exon_number 4; exon_id "ENSE00003474469.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6436 chr22 HAVANA exon 20113826 20113891 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; exon_number 5; exon_id "ENSE00000650881.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6437 chr22 HAVANA CDS 20113826 20113891 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; exon_number 5; exon_id "ENSE00000650881.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6438 chr22 HAVANA exon 20114475 20114704 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; exon_number 6; exon_id "ENSE00001320805.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6439 chr22 HAVANA CDS 20114475 20114572 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; exon_number 6; exon_id "ENSE00001320805.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6440 chr22 HAVANA stop_codon 20114573 20114575 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; exon_number 6; exon_id "ENSE00001320805.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6441 chr22 HAVANA UTR 20105071 20105172 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6442 chr22 HAVANA UTR 20114573 20114704 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000331821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RANBP1-015"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13775.1"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000343733.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6443 chr22 HAVANA transcript 20105080 20113011 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000411892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-012"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319935.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6444 chr22 HAVANA exon 20105080 20105187 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000411892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-012"; exon_number 1; exon_id "ENSE00001595318.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319935.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6445 chr22 HAVANA CDS 20105173 20105187 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000411892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-012"; exon_number 1; exon_id "ENSE00001595318.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319935.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6446 chr22 HAVANA start_codon 20105173 20105175 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000411892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-012"; exon_number 1; exon_id "ENSE00001595318.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319935.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6447 chr22 HAVANA exon 20106536 20106672 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000411892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-012"; exon_number 2; exon_id "ENSE00003568790.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319935.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6448 chr22 HAVANA CDS 20106536 20106672 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000411892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-012"; exon_number 2; exon_id "ENSE00003568790.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319935.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6449 chr22 HAVANA exon 20109787 20109944 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000411892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-012"; exon_number 3; exon_id "ENSE00003557970.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319935.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6450 chr22 HAVANA CDS 20109787 20109944 . + 1 gene_id "ENSG00000099901.12"; transcript_id "ENST00000411892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-012"; exon_number 3; exon_id "ENSE00003557970.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319935.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6451 chr22 HAVANA exon 20112831 20113011 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000411892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-012"; exon_number 4; exon_id "ENSE00001753095.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319935.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6452 chr22 HAVANA CDS 20112831 20113011 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000411892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-012"; exon_number 4; exon_id "ENSE00001753095.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319935.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6453 chr22 HAVANA UTR 20105080 20105172 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000411892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-012"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319935.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6454 chr22 HAVANA transcript 20105176 20107052 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000467920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RANBP1-013"; level 2; tag "basic"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319936.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6455 chr22 HAVANA exon 20105176 20105187 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000467920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RANBP1-013"; exon_number 1; exon_id "ENSE00001914244.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319936.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6456 chr22 HAVANA exon 20106536 20107052 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000467920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RANBP1-013"; exon_number 2; exon_id "ENSE00001810297.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319936.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6457 chr22 HAVANA transcript 20105305 20109944 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000416427.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318489.28";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6458 chr22 HAVANA exon 20105305 20105654 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000416427.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-006"; exon_number 1; exon_id "ENSE00001643775.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318489.28";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6459 chr22 HAVANA exon 20106536 20106672 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000416427.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-006"; exon_number 2; exon_id "ENSE00003563009.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318489.28";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6460 chr22 HAVANA CDS 20106671 20106672 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000416427.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-006"; exon_number 2; exon_id "ENSE00003563009.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318489.28";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6461 chr22 HAVANA start_codon 20106671 20106672 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000416427.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-006"; exon_number 2; exon_id "ENSE00003563009.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318489.28";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6462 chr22 HAVANA start_codon 20109787 20109787 . + 1 gene_id "ENSG00000099901.12"; transcript_id "ENST00000416427.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-006"; exon_number 3; exon_id "ENSE00003563009.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318489.28";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6463 chr22 HAVANA exon 20109787 20109944 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000416427.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-006"; exon_number 3; exon_id "ENSE00003544664.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318489.28";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6464 chr22 HAVANA CDS 20109787 20109944 . + 1 gene_id "ENSG00000099901.12"; transcript_id "ENST00000416427.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-006"; exon_number 3; exon_id "ENSE00003544664.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318489.28";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6465 chr22 HAVANA UTR 20105305 20105654 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000416427.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318489.28";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6466 chr22 HAVANA UTR 20106536 20106670 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000416427.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318489.28";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6467 chr22 HAVANA transcript 20105398 20109944 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000421656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318490.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6468 chr22 HAVANA exon 20105398 20105435 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000421656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-007"; exon_number 1; exon_id "ENSE00001679670.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318490.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6469 chr22 HAVANA exon 20106536 20106672 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000421656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-007"; exon_number 2; exon_id "ENSE00003563009.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318490.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6470 chr22 HAVANA CDS 20106671 20106672 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000421656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-007"; exon_number 2; exon_id "ENSE00003563009.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318490.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6471 chr22 HAVANA start_codon 20106671 20106672 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000421656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-007"; exon_number 2; exon_id "ENSE00003563009.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318490.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6472 chr22 HAVANA start_codon 20109787 20109787 . + 1 gene_id "ENSG00000099901.12"; transcript_id "ENST00000421656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-007"; exon_number 3; exon_id "ENSE00003563009.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318490.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6473 chr22 HAVANA exon 20109787 20109944 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000421656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-007"; exon_number 3; exon_id "ENSE00003544664.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318490.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6474 chr22 HAVANA CDS 20109787 20109944 . + 1 gene_id "ENSG00000099901.12"; transcript_id "ENST00000421656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-007"; exon_number 3; exon_id "ENSE00003544664.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318490.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6475 chr22 HAVANA UTR 20105398 20105435 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000421656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318490.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6476 chr22 HAVANA UTR 20106536 20106670 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000421656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318490.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6477 chr22 HAVANA transcript 20105457 20114150 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000423859.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318491.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6478 chr22 HAVANA exon 20105457 20105539 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000423859.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-008"; exon_number 1; exon_id "ENSE00001767514.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318491.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6479 chr22 HAVANA exon 20106536 20106672 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000423859.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-008"; exon_number 2; exon_id "ENSE00003563009.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318491.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6480 chr22 HAVANA CDS 20106671 20106672 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000423859.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-008"; exon_number 2; exon_id "ENSE00003563009.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318491.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6481 chr22 HAVANA start_codon 20106671 20106672 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000423859.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-008"; exon_number 2; exon_id "ENSE00003563009.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318491.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6482 chr22 HAVANA start_codon 20109787 20109787 . + 1 gene_id "ENSG00000099901.12"; transcript_id "ENST00000423859.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-008"; exon_number 3; exon_id "ENSE00003563009.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318491.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6483 chr22 HAVANA exon 20109787 20109944 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000423859.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-008"; exon_number 3; exon_id "ENSE00003557970.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318491.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6484 chr22 HAVANA CDS 20109787 20109944 . + 1 gene_id "ENSG00000099901.12"; transcript_id "ENST00000423859.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-008"; exon_number 3; exon_id "ENSE00003557970.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318491.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6485 chr22 HAVANA exon 20112831 20112959 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000423859.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-008"; exon_number 4; exon_id "ENSE00003474469.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318491.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6486 chr22 HAVANA CDS 20112831 20112959 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000423859.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-008"; exon_number 4; exon_id "ENSE00003474469.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318491.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6487 chr22 HAVANA exon 20113826 20114150 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000423859.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-008"; exon_number 5; exon_id "ENSE00001677760.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318491.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6488 chr22 HAVANA CDS 20113826 20114150 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000423859.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-008"; exon_number 5; exon_id "ENSE00001677760.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318491.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6489 chr22 HAVANA UTR 20105457 20105539 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000423859.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318491.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6490 chr22 HAVANA UTR 20106536 20106670 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000423859.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318491.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6491 chr22 HAVANA transcript 20105476 20114558 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6492 chr22 HAVANA exon 20105476 20105836 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; exon_number 1; exon_id "ENSE00001823499.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6493 chr22 HAVANA exon 20106536 20106672 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; exon_number 2; exon_id "ENSE00003563009.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6494 chr22 HAVANA CDS 20106671 20106672 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; exon_number 2; exon_id "ENSE00003563009.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6495 chr22 HAVANA start_codon 20106671 20106672 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; exon_number 2; exon_id "ENSE00003563009.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6496 chr22 HAVANA start_codon 20109787 20109787 . + 1 gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; exon_number 3; exon_id "ENSE00003563009.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6497 chr22 HAVANA exon 20109787 20109944 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; exon_number 3; exon_id "ENSE00003557970.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6498 chr22 HAVANA CDS 20109787 20109944 . + 1 gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; exon_number 3; exon_id "ENSE00003557970.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6499 chr22 HAVANA exon 20112831 20112959 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; exon_number 4; exon_id "ENSE00003474469.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6500 chr22 HAVANA CDS 20112831 20112959 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; exon_number 4; exon_id "ENSE00003474469.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6501 chr22 HAVANA exon 20113826 20113891 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; exon_number 5; exon_id "ENSE00000650881.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6502 chr22 HAVANA CDS 20113826 20113891 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; exon_number 5; exon_id "ENSE00000650881.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6503 chr22 HAVANA exon 20114478 20114558 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; exon_number 6; exon_id "ENSE00001613318.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6504 chr22 HAVANA CDS 20114478 20114558 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; exon_number 6; exon_id "ENSE00001613318.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6505 chr22 HAVANA UTR 20105476 20105836 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6506 chr22 HAVANA UTR 20106536 20106670 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000418705.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RANBP1-009"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318497.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6507 chr22 HAVANA transcript 20110130 20114876 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000448394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-011"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319851.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6508 chr22 HAVANA exon 20110130 20110220 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000448394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-011"; exon_number 1; exon_id "ENSE00001677419.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319851.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6509 chr22 HAVANA CDS 20110130 20110220 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000448394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-011"; exon_number 1; exon_id "ENSE00001677419.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319851.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6510 chr22 HAVANA exon 20112831 20112959 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000448394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-011"; exon_number 2; exon_id "ENSE00003474469.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319851.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6511 chr22 HAVANA CDS 20112831 20112959 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000448394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-011"; exon_number 2; exon_id "ENSE00003474469.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319851.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6512 chr22 HAVANA exon 20113826 20113891 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000448394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-011"; exon_number 3; exon_id "ENSE00000650881.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319851.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6513 chr22 HAVANA CDS 20113826 20113891 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000448394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-011"; exon_number 3; exon_id "ENSE00000650881.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319851.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6514 chr22 HAVANA exon 20114475 20114876 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000448394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-011"; exon_number 4; exon_id "ENSE00001744863.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319851.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6515 chr22 HAVANA CDS 20114475 20114572 . + 2 gene_id "ENSG00000099901.12"; transcript_id "ENST00000448394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-011"; exon_number 4; exon_id "ENSE00001744863.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319851.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6516 chr22 HAVANA stop_codon 20114573 20114575 . + 0 gene_id "ENSG00000099901.12"; transcript_id "ENST00000448394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-011"; exon_number 4; exon_id "ENSE00001744863.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319851.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6517 chr22 HAVANA UTR 20114573 20114876 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000448394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RANBP1-011"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000319851.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6518 chr22 HAVANA transcript 20111662 20114704 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000486575.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RANBP1-003"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318409.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6519 chr22 HAVANA exon 20111662 20112959 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000486575.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RANBP1-003"; exon_number 1; exon_id "ENSE00001860627.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318409.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6520 chr22 HAVANA exon 20113826 20114704 . + . gene_id "ENSG00000099901.12"; transcript_id "ENST00000486575.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RANBP1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RANBP1-003"; exon_number 2; exon_id "ENSE00003685120.1"; level 2; havana_gene "OTTHUMG00000150490.31"; havana_transcript "OTTHUMT00000318409.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6521 chr22 ENSEMBL gene 20113925 20114049 . + . gene_id "ENSG00000264346.1"; transcript_id "ENSG00000264346.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA77"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA77"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6522 chr22 ENSEMBL transcript 20113925 20114049 . + . gene_id "ENSG00000264346.1"; transcript_id "ENST00000578179.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA77"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA77.4-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6523 chr22 ENSEMBL exon 20113925 20114049 . + . gene_id "ENSG00000264346.1"; transcript_id "ENST00000578179.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA77"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA77.4-201"; exon_number 1; exon_id "ENSE00002695389.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6524 chr22 HAVANA gene 20116979 20135530 . + . gene_id "ENSG00000099904.11"; transcript_id "ENSG00000099904.11"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8"; level 1; havana_gene "OTTHUMG00000150499.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6525 chr22 HAVANA transcript 20116979 20127432 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000436518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZDHHC8-004"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318567.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6526 chr22 HAVANA exon 20116979 20117065 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000436518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZDHHC8-004"; exon_number 1; exon_id "ENSE00001740198.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318567.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6527 chr22 HAVANA CDS 20116995 20117065 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000436518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZDHHC8-004"; exon_number 1; exon_id "ENSE00001740198.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318567.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6528 chr22 HAVANA start_codon 20116995 20116997 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000436518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZDHHC8-004"; exon_number 1; exon_id "ENSE00001740198.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318567.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6529 chr22 HAVANA exon 20126717 20126838 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000436518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZDHHC8-004"; exon_number 2; exon_id "ENSE00001221943.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318567.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6530 chr22 HAVANA CDS 20126717 20126838 . + 1 gene_id "ENSG00000099904.11"; transcript_id "ENST00000436518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZDHHC8-004"; exon_number 2; exon_id "ENSE00001221943.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318567.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6531 chr22 HAVANA exon 20127001 20127158 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000436518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZDHHC8-004"; exon_number 3; exon_id "ENSE00001705526.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318567.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6532 chr22 HAVANA CDS 20127001 20127158 . + 2 gene_id "ENSG00000099904.11"; transcript_id "ENST00000436518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZDHHC8-004"; exon_number 3; exon_id "ENSE00001705526.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318567.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6533 chr22 HAVANA exon 20127243 20127432 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000436518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZDHHC8-004"; exon_number 4; exon_id "ENSE00001595632.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318567.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6534 chr22 HAVANA CDS 20127243 20127432 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000436518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZDHHC8-004"; exon_number 4; exon_id "ENSE00001595632.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318567.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6535 chr22 HAVANA UTR 20116979 20116994 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000436518.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZDHHC8-004"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318567.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6536 chr22 HAVANA transcript 20119330 20135530 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6537 chr22 HAVANA exon 20119330 20119574 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 1; exon_id "ENSE00001823852.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6538 chr22 HAVANA CDS 20119471 20119574 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 1; exon_id "ENSE00001823852.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6539 chr22 HAVANA start_codon 20119471 20119473 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 1; exon_id "ENSE00001823852.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6540 chr22 HAVANA exon 20126717 20126838 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 2; exon_id "ENSE00001221943.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6541 chr22 HAVANA CDS 20126717 20126838 . + 1 gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 2; exon_id "ENSE00001221943.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6542 chr22 HAVANA exon 20127001 20127158 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 3; exon_id "ENSE00001705526.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6543 chr22 HAVANA CDS 20127001 20127158 . + 2 gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 3; exon_id "ENSE00001705526.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6544 chr22 HAVANA exon 20127243 20127415 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 4; exon_id "ENSE00001331439.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6545 chr22 HAVANA CDS 20127243 20127415 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 4; exon_id "ENSE00001331439.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6546 chr22 HAVANA exon 20127638 20127740 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 5; exon_id "ENSE00001331437.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6547 chr22 HAVANA CDS 20127638 20127740 . + 1 gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 5; exon_id "ENSE00001331437.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6548 chr22 HAVANA exon 20128140 20128231 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 6; exon_id "ENSE00003542072.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
6549 chr22 HAVANA CDS 20128140 20128231 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 6; exon_id "ENSE00003542072.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6550 chr22 HAVANA exon 20128394 20128535 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 7; exon_id "ENSE00003595811.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6551 chr22 HAVANA CDS 20128394 20128535 . + 1 gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 7; exon_id "ENSE00003595811.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6552 chr22 HAVANA exon 20128740 20128860 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 8; exon_id "ENSE00003504610.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6553 chr22 HAVANA CDS 20128740 20128860 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 8; exon_id "ENSE00003504610.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6554 chr22 HAVANA exon 20128944 20129053 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 9; exon_id "ENSE00003459105.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6555 chr22 HAVANA CDS 20128944 20129053 . + 2 gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 9; exon_id "ENSE00003459105.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6556 chr22 HAVANA exon 20130279 20131279 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 10; exon_id "ENSE00001221847.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6557 chr22 HAVANA CDS 20130279 20131279 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 10; exon_id "ENSE00001221847.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6558 chr22 HAVANA exon 20132752 20135530 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 11; exon_id "ENSE00001799604.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6559 chr22 HAVANA CDS 20132752 20132920 . + 1 gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 11; exon_id "ENSE00001799604.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6560 chr22 HAVANA stop_codon 20132921 20132923 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; exon_number 11; exon_id "ENSE00001799604.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6561 chr22 HAVANA UTR 20119330 20119470 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6562 chr22 HAVANA UTR 20132921 20135530 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000334554.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13776.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318564.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6563 chr22 HAVANA transcript 20119471 20133973 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6564 chr22 HAVANA exon 20119471 20119574 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 1; exon_id "ENSE00001547524.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6565 chr22 HAVANA CDS 20119471 20119574 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 1; exon_id "ENSE00001547524.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6566 chr22 HAVANA start_codon 20119471 20119473 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 1; exon_id "ENSE00001547524.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6567 chr22 HAVANA exon 20126717 20126838 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 2; exon_id "ENSE00001221943.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6568 chr22 HAVANA CDS 20126717 20126838 . + 1 gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 2; exon_id "ENSE00001221943.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6569 chr22 HAVANA exon 20127001 20127158 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 3; exon_id "ENSE00001705526.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6570 chr22 HAVANA CDS 20127001 20127158 . + 2 gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 3; exon_id "ENSE00001705526.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6571 chr22 HAVANA exon 20128140 20128231 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 4; exon_id "ENSE00003542072.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6572 chr22 HAVANA CDS 20128140 20128231 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 4; exon_id "ENSE00003542072.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6573 chr22 HAVANA exon 20128394 20128535 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 5; exon_id "ENSE00003595811.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6574 chr22 HAVANA CDS 20128394 20128535 . + 1 gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 5; exon_id "ENSE00003595811.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6575 chr22 HAVANA exon 20128740 20128860 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 6; exon_id "ENSE00003504610.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6576 chr22 HAVANA CDS 20128740 20128860 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 6; exon_id "ENSE00003504610.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6577 chr22 HAVANA exon 20128944 20129053 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 7; exon_id "ENSE00003459105.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6578 chr22 HAVANA CDS 20128944 20129053 . + 2 gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 7; exon_id "ENSE00003459105.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6579 chr22 HAVANA exon 20130279 20131279 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 8; exon_id "ENSE00001221847.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6580 chr22 HAVANA CDS 20130279 20131279 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 8; exon_id "ENSE00001221847.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6581 chr22 HAVANA exon 20132752 20133973 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 9; exon_id "ENSE00001718714.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6582 chr22 HAVANA CDS 20132752 20132920 . + 1 gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 9; exon_id "ENSE00001718714.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6583 chr22 HAVANA stop_codon 20132921 20132923 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; exon_number 9; exon_id "ENSE00001718714.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6584 chr22 HAVANA UTR 20132921 20133973 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000320602.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318566.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6585 chr22 HAVANA transcript 20119471 20135529 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6586 chr22 HAVANA exon 20119471 20119574 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 1; exon_id "ENSE00001547524.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6587 chr22 HAVANA CDS 20119471 20119574 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 1; exon_id "ENSE00001547524.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6588 chr22 HAVANA start_codon 20119471 20119473 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 1; exon_id "ENSE00001547524.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6589 chr22 HAVANA exon 20126717 20126838 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 2; exon_id "ENSE00001221943.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6590 chr22 HAVANA CDS 20126717 20126838 . + 1 gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 2; exon_id "ENSE00001221943.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6591 chr22 HAVANA exon 20127001 20127158 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 3; exon_id "ENSE00001705526.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6592 chr22 HAVANA CDS 20127001 20127158 . + 2 gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 3; exon_id "ENSE00001705526.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6593 chr22 HAVANA exon 20127243 20127415 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 4; exon_id "ENSE00001331439.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6594 chr22 HAVANA CDS 20127243 20127415 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 4; exon_id "ENSE00001331439.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6595 chr22 HAVANA exon 20127638 20127740 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 5; exon_id "ENSE00001331437.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6596 chr22 HAVANA CDS 20127638 20127740 . + 1 gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 5; exon_id "ENSE00001331437.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6597 chr22 HAVANA exon 20128140 20128231 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 6; exon_id "ENSE00003542072.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6598 chr22 HAVANA CDS 20128140 20128231 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 6; exon_id "ENSE00003542072.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6599 chr22 HAVANA exon 20128394 20128535 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 7; exon_id "ENSE00003595811.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6600 chr22 HAVANA CDS 20128394 20128535 . + 1 gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 7; exon_id "ENSE00003595811.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6601 chr22 HAVANA exon 20128740 20128860 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 8; exon_id "ENSE00003504610.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6602 chr22 HAVANA CDS 20128740 20128860 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 8; exon_id "ENSE00003504610.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6603 chr22 HAVANA exon 20128944 20129053 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 9; exon_id "ENSE00003459105.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6604 chr22 HAVANA CDS 20128944 20129053 . + 2 gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 9; exon_id "ENSE00003459105.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6605 chr22 HAVANA exon 20130279 20131279 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 10; exon_id "ENSE00001221847.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6606 chr22 HAVANA CDS 20130279 20131279 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 10; exon_id "ENSE00001221847.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6607 chr22 HAVANA exon 20134544 20135529 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 11; exon_id "ENSE00001801877.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6608 chr22 HAVANA CDS 20134544 20134751 . + 1 gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 11; exon_id "ENSE00001801877.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6609 chr22 HAVANA stop_codon 20134752 20134754 . + 0 gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; exon_number 11; exon_id "ENSE00001801877.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6610 chr22 HAVANA UTR 20134752 20135529 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000405930.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZDHHC8-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54502.1"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318565.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6611 chr22 HAVANA transcript 20119518 20129055 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000468112.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318568.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6612 chr22 HAVANA exon 20119518 20119574 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000468112.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8-005"; exon_number 1; exon_id "ENSE00001849113.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318568.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6613 chr22 HAVANA exon 20128140 20128231 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000468112.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8-005"; exon_number 2; exon_id "ENSE00003606444.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318568.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6614 chr22 HAVANA exon 20128394 20128535 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000468112.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8-005"; exon_number 3; exon_id "ENSE00003575693.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318568.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6615 chr22 HAVANA exon 20128740 20128860 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000468112.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8-005"; exon_number 4; exon_id "ENSE00003684165.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318568.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6616 chr22 HAVANA exon 20128944 20129055 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000468112.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8-005"; exon_number 5; exon_id "ENSE00001882619.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318568.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6617 chr22 HAVANA transcript 20127460 20128849 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000469212.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZDHHC8-006"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6618 chr22 HAVANA exon 20127460 20127740 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000469212.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZDHHC8-006"; exon_number 1; exon_id "ENSE00001944970.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6619 chr22 HAVANA exon 20128140 20128231 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000469212.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZDHHC8-006"; exon_number 2; exon_id "ENSE00003606444.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6620 chr22 HAVANA exon 20128394 20128535 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000469212.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZDHHC8-006"; exon_number 3; exon_id "ENSE00003575693.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6621 chr22 HAVANA exon 20128740 20128849 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000469212.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZDHHC8-006"; exon_number 4; exon_id "ENSE00001823711.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6622 chr22 HAVANA transcript 20127928 20130510 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000472497.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZDHHC8-007"; level 2; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6623 chr22 HAVANA exon 20127928 20128231 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000472497.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZDHHC8-007"; exon_number 1; exon_id "ENSE00001855946.1"; level 2; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6624 chr22 HAVANA exon 20128394 20128535 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000472497.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZDHHC8-007"; exon_number 2; exon_id "ENSE00003575693.1"; level 2; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6625 chr22 HAVANA exon 20128740 20128860 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000472497.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZDHHC8-007"; exon_number 3; exon_id "ENSE00003684165.1"; level 2; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6626 chr22 HAVANA exon 20128944 20129053 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000472497.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZDHHC8-007"; exon_number 4; exon_id "ENSE00003658154.1"; level 2; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6627 chr22 HAVANA exon 20130279 20130510 . + . gene_id "ENSG00000099904.11"; transcript_id "ENST00000472497.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZDHHC8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZDHHC8-007"; exon_number 5; exon_id "ENSE00001920256.1"; level 2; havana_gene "OTTHUMG00000150499.3"; havana_transcript "OTTHUMT00000318570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6628 chr22 HAVANA gene 20135950 20138399 . - . gene_id "ENSG00000234409.4"; transcript_id "ENSG00000234409.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC006547.14"; level 1; havana_gene "OTTHUMG00000150751.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6629 chr22 HAVANA transcript 20135950 20138399 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6630 chr22 HAVANA exon 20137991 20138399 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 1; exon_id "ENSE00001597219.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6631 chr22 HAVANA CDS 20137991 20138399 . - 1 gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 1; exon_id "ENSE00001597219.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6632 chr22 HAVANA exon 20137666 20137773 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 2; exon_id "ENSE00001724398.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6633 chr22 HAVANA CDS 20137666 20137773 . - 0 gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 2; exon_id "ENSE00001724398.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6634 chr22 HAVANA exon 20137478 20137582 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 3; exon_id "ENSE00001803655.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6635 chr22 HAVANA CDS 20137478 20137582 . - 0 gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 3; exon_id "ENSE00001803655.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6636 chr22 HAVANA exon 20137247 20137303 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 4; exon_id "ENSE00001687839.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6637 chr22 HAVANA CDS 20137247 20137303 . - 0 gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 4; exon_id "ENSE00001687839.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6638 chr22 HAVANA exon 20137104 20137163 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 5; exon_id "ENSE00003490769.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6639 chr22 HAVANA CDS 20137104 20137163 . - 0 gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 5; exon_id "ENSE00003490769.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6640 chr22 HAVANA exon 20136935 20136999 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 6; exon_id "ENSE00003577979.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6641 chr22 HAVANA CDS 20136935 20136999 . - 0 gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 6; exon_id "ENSE00003577979.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6642 chr22 HAVANA exon 20136710 20136767 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 7; exon_id "ENSE00003675356.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6643 chr22 HAVANA CDS 20136710 20136767 . - 1 gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 7; exon_id "ENSE00003675356.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6644 chr22 HAVANA exon 20136398 20136447 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 8; exon_id "ENSE00003539712.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6645 chr22 HAVANA CDS 20136398 20136447 . - 0 gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 8; exon_id "ENSE00003539712.1"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6646 chr22 HAVANA exon 20135950 20136323 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 9; exon_id "ENSE00001726623.2"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6647 chr22 HAVANA CDS 20136140 20136323 . - 1 gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 9; exon_id "ENSE00001726623.2"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
6648 chr22 HAVANA stop_codon 20136137 20136139 . - 0 gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; exon_number 9; exon_id "ENSE00001726623.2"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
6649 chr22 HAVANA UTR 20135950 20136139 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000439765.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC006547.14-002"; level 1; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319939.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6650 chr22 HAVANA transcript 20136109 20137426 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000444532.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AC006547.14-001"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319938.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6651 chr22 HAVANA exon 20137247 20137426 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000444532.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AC006547.14-001"; exon_number 1; exon_id "ENSE00001604531.2"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319938.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6652 chr22 HAVANA exon 20137104 20137163 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000444532.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AC006547.14-001"; exon_number 2; exon_id "ENSE00003483844.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319938.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6653 chr22 HAVANA exon 20136935 20136999 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000444532.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AC006547.14-001"; exon_number 3; exon_id "ENSE00003635757.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319938.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6654 chr22 HAVANA exon 20136710 20136767 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000444532.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AC006547.14-001"; exon_number 4; exon_id "ENSE00003512510.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319938.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6655 chr22 HAVANA exon 20136398 20136447 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000444532.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AC006547.14-001"; exon_number 5; exon_id "ENSE00003463497.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319938.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6656 chr22 HAVANA exon 20136109 20136323 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000444532.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AC006547.14-001"; exon_number 6; exon_id "ENSE00001878534.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150751.4"; havana_transcript "OTTHUMT00000319938.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6657 chr22 ENSEMBL transcript 20137086 20138302 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000540078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC006547.14-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150751.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6658 chr22 ENSEMBL exon 20137991 20138302 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000540078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC006547.14-201"; exon_number 1; exon_id "ENSE00002238651.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150751.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6659 chr22 ENSEMBL CDS 20137991 20138302 . - 0 gene_id "ENSG00000234409.4"; transcript_id "ENST00000540078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC006547.14-201"; exon_number 1; exon_id "ENSE00002238651.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150751.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6660 chr22 ENSEMBL exon 20137666 20137773 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000540078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC006547.14-201"; exon_number 2; exon_id "ENSE00001724398.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150751.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6661 chr22 ENSEMBL CDS 20137666 20137773 . - 0 gene_id "ENSG00000234409.4"; transcript_id "ENST00000540078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC006547.14-201"; exon_number 2; exon_id "ENSE00001724398.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150751.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6662 chr22 ENSEMBL exon 20137478 20137582 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000540078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC006547.14-201"; exon_number 3; exon_id "ENSE00001803655.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150751.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6663 chr22 ENSEMBL CDS 20137478 20137582 . - 0 gene_id "ENSG00000234409.4"; transcript_id "ENST00000540078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC006547.14-201"; exon_number 3; exon_id "ENSE00001803655.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150751.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6664 chr22 ENSEMBL exon 20137247 20137303 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000540078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC006547.14-201"; exon_number 4; exon_id "ENSE00001687839.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150751.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6665 chr22 ENSEMBL CDS 20137247 20137303 . - 0 gene_id "ENSG00000234409.4"; transcript_id "ENST00000540078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC006547.14-201"; exon_number 4; exon_id "ENSE00001687839.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150751.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6666 chr22 ENSEMBL exon 20137086 20137163 . - . gene_id "ENSG00000234409.4"; transcript_id "ENST00000540078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC006547.14-201"; exon_number 5; exon_id "ENSE00002285416.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150751.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6667 chr22 ENSEMBL CDS 20137086 20137163 . - 0 gene_id "ENSG00000234409.4"; transcript_id "ENST00000540078.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC006547.14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC006547.14-201"; exon_number 5; exon_id "ENSE00002285416.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150751.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6668 chr22 HAVANA gene 20186252 20192441 . - . gene_id "ENSG00000249923.1"; transcript_id "ENSG00000249923.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B444P24.8"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "XXbac-B444P24.8"; level 2; havana_gene "OTTHUMG00000150567.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6669 chr22 HAVANA transcript 20186252 20192441 . - . gene_id "ENSG00000249923.1"; transcript_id "ENST00000506039.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B444P24.8"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.8-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150567.3"; havana_transcript "OTTHUMT00000318944.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6670 chr22 HAVANA exon 20192176 20192441 . - . gene_id "ENSG00000249923.1"; transcript_id "ENST00000506039.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B444P24.8"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.8-001"; exon_number 1; exon_id "ENSE00002049937.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150567.3"; havana_transcript "OTTHUMT00000318944.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6671 chr22 HAVANA exon 20191856 20192022 . - . gene_id "ENSG00000249923.1"; transcript_id "ENST00000506039.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B444P24.8"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.8-001"; exon_number 2; exon_id "ENSE00002063886.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150567.3"; havana_transcript "OTTHUMT00000318944.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6672 chr22 HAVANA exon 20187578 20188849 . - . gene_id "ENSG00000249923.1"; transcript_id "ENST00000506039.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B444P24.8"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.8-001"; exon_number 3; exon_id "ENSE00002081129.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150567.3"; havana_transcript "OTTHUMT00000318944.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6673 chr22 HAVANA exon 20186252 20186774 . - . gene_id "ENSG00000249923.1"; transcript_id "ENST00000506039.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B444P24.8"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.8-001"; exon_number 4; exon_id "ENSE00002047108.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150567.3"; havana_transcript "OTTHUMT00000318944.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6674 chr22 HAVANA gene 20193920 20196047 . + . gene_id "ENSG00000236499.2"; transcript_id "ENSG00000236499.2"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LINC00896"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LINC00896"; level 2; havana_gene "OTTHUMG00000186112.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6675 chr22 HAVANA transcript 20193920 20196047 . + . gene_id "ENSG00000236499.2"; transcript_id "ENST00000609602.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LINC00896"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LINC00896-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186112.1"; havana_transcript "OTTHUMT00000472273.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6676 chr22 HAVANA exon 20193920 20196047 . + . gene_id "ENSG00000236499.2"; transcript_id "ENST00000609602.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LINC00896"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LINC00896-001"; exon_number 1; exon_id "ENSE00003707442.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186112.1"; havana_transcript "OTTHUMT00000472273.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6677 chr22 ENSEMBL transcript 20194100 20194706 . + . gene_id "ENSG00000236499.2"; transcript_id "ENST00000423736.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LINC00896"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LINC00896-201"; level 3; havana_gene "OTTHUMG00000186112.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6678 chr22 ENSEMBL exon 20194100 20194706 . + . gene_id "ENSG00000236499.2"; transcript_id "ENST00000423736.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LINC00896"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LINC00896-201"; exon_number 1; exon_id "ENSE00001785291.1"; level 3; havana_gene "OTTHUMG00000186112.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6679 chr22 HAVANA gene 20228938 20270769 . - . gene_id "ENSG00000040608.9"; transcript_id "ENSG00000040608.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTN4R"; level 1; tag "ncRNA_host"; havana_gene "OTTHUMG00000150572.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6680 chr22 HAVANA transcript 20228938 20255212 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000416372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTN4R-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318964.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6681 chr22 HAVANA exon 20255132 20255212 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000416372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTN4R-002"; exon_number 1; exon_id "ENSE00001660383.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318964.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6682 chr22 HAVANA CDS 20255132 20255212 . - 2 gene_id "ENSG00000040608.9"; transcript_id "ENST00000416372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTN4R-002"; exon_number 1; exon_id "ENSE00001660383.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318964.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6683 chr22 HAVANA exon 20228938 20230633 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000416372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTN4R-002"; exon_number 2; exon_id "ENSE00001557601.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318964.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6684 chr22 HAVANA CDS 20229237 20230633 . - 2 gene_id "ENSG00000040608.9"; transcript_id "ENST00000416372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTN4R-002"; exon_number 2; exon_id "ENSE00001557601.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318964.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6685 chr22 HAVANA stop_codon 20229234 20229236 . - 0 gene_id "ENSG00000040608.9"; transcript_id "ENST00000416372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTN4R-002"; exon_number 2; exon_id "ENSE00001557601.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318964.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6686 chr22 HAVANA UTR 20228938 20229236 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000416372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTN4R-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318964.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6687 chr22 HAVANA transcript 20228938 20256054 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000043402.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTN4R-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13777.1"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318950.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6688 chr22 HAVANA exon 20255594 20256054 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000043402.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTN4R-001"; exon_number 1; exon_id "ENSE00001358408.6"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13777.1"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318950.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6689 chr22 HAVANA CDS 20255594 20255615 . - 0 gene_id "ENSG00000040608.9"; transcript_id "ENST00000043402.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTN4R-001"; exon_number 1; exon_id "ENSE00001358408.6"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13777.1"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318950.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6690 chr22 HAVANA start_codon 20255613 20255615 . - 0 gene_id "ENSG00000040608.9"; transcript_id "ENST00000043402.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTN4R-001"; exon_number 1; exon_id "ENSE00001358408.6"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13777.1"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318950.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6691 chr22 HAVANA exon 20228938 20230633 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000043402.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTN4R-001"; exon_number 2; exon_id "ENSE00001557601.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13777.1"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318950.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6692 chr22 HAVANA CDS 20229237 20230633 . - 2 gene_id "ENSG00000040608.9"; transcript_id "ENST00000043402.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTN4R-001"; exon_number 2; exon_id "ENSE00001557601.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13777.1"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318950.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6693 chr22 HAVANA stop_codon 20229234 20229236 . - 0 gene_id "ENSG00000040608.9"; transcript_id "ENST00000043402.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTN4R-001"; exon_number 2; exon_id "ENSE00001557601.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13777.1"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318950.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6694 chr22 HAVANA UTR 20255616 20256054 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000043402.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTN4R-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13777.1"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318950.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6695 chr22 HAVANA UTR 20228938 20229236 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000043402.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTN4R-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13777.1"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318950.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6696 chr22 HAVANA transcript 20228940 20231207 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000425986.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTN4R-003"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6697 chr22 HAVANA exon 20230929 20231207 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000425986.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTN4R-003"; exon_number 1; exon_id "ENSE00001619034.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6698 chr22 HAVANA CDS 20230929 20231207 . - 2 gene_id "ENSG00000040608.9"; transcript_id "ENST00000425986.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTN4R-003"; exon_number 1; exon_id "ENSE00001619034.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6699 chr22 HAVANA exon 20228940 20230633 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000425986.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTN4R-003"; exon_number 2; exon_id "ENSE00000330966.5"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6700 chr22 HAVANA CDS 20229237 20230633 . - 2 gene_id "ENSG00000040608.9"; transcript_id "ENST00000425986.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTN4R-003"; exon_number 2; exon_id "ENSE00000330966.5"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6701 chr22 HAVANA stop_codon 20229234 20229236 . - 0 gene_id "ENSG00000040608.9"; transcript_id "ENST00000425986.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTN4R-003"; exon_number 2; exon_id "ENSE00000330966.5"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6702 chr22 HAVANA UTR 20228940 20229236 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000425986.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTN4R-003"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6703 chr22 HAVANA transcript 20230120 20259270 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000469601.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RTN4R-006"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318968.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6704 chr22 HAVANA exon 20259113 20259270 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000469601.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RTN4R-006"; exon_number 1; exon_id "ENSE00001895162.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318968.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6705 chr22 HAVANA exon 20230120 20230633 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000469601.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RTN4R-006"; exon_number 2; exon_id "ENSE00001957290.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318968.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6706 chr22 HAVANA transcript 20230372 20270769 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000474642.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RTN4R-007"; level 2; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318969.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6707 chr22 HAVANA exon 20270566 20270769 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000474642.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RTN4R-007"; exon_number 1; exon_id "ENSE00001818327.1"; level 2; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318969.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6708 chr22 HAVANA exon 20265264 20265356 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000474642.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RTN4R-007"; exon_number 2; exon_id "ENSE00001943316.1"; level 2; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318969.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6709 chr22 HAVANA exon 20230372 20230633 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000474642.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RTN4R-007"; exon_number 3; exon_id "ENSE00001846179.1"; level 2; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318969.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6710 chr22 HAVANA transcript 20230543 20256888 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000463936.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RTN4R-005"; level 2; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318967.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6711 chr22 HAVANA exon 20256522 20256888 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000463936.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RTN4R-005"; exon_number 1; exon_id "ENSE00001905604.1"; level 2; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318967.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6712 chr22 HAVANA exon 20230543 20230633 . - . gene_id "ENSG00000040608.9"; transcript_id "ENST00000463936.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTN4R"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RTN4R-005"; exon_number 2; exon_id "ENSE00001885114.1"; level 2; havana_gene "OTTHUMG00000150572.2"; havana_transcript "OTTHUMT00000318967.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6713 chr22 ENSEMBL gene 20236657 20236734 . - . gene_id "ENSG00000221039.1"; transcript_id "ENSG00000221039.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR1286"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR1286"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6714 chr22 ENSEMBL transcript 20236657 20236734 . - . gene_id "ENSG00000221039.1"; transcript_id "ENST00000408112.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR1286"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR1286-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6715 chr22 ENSEMBL exon 20236657 20236734 . - . gene_id "ENSG00000221039.1"; transcript_id "ENST00000408112.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR1286"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR1286-201"; exon_number 1; exon_id "ENSE00001564747.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6716 chr22 HAVANA gene 20287283 20300739 . + . gene_id "ENSG00000161132.6"; transcript_id "ENSG00000161132.6"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B444P24.10"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.10"; level 2; havana_gene "OTTHUMG00000150582.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6717 chr22 HAVANA transcript 20287283 20300739 . + . gene_id "ENSG00000161132.6"; transcript_id "ENST00000438948.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B444P24.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.10-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150582.2"; havana_transcript "OTTHUMT00000318963.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6718 chr22 HAVANA exon 20287283 20287555 . + . gene_id "ENSG00000161132.6"; transcript_id "ENST00000438948.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B444P24.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.10-001"; exon_number 1; exon_id "ENSE00001759529.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150582.2"; havana_transcript "OTTHUMT00000318963.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6719 chr22 HAVANA exon 20290792 20290829 . + . gene_id "ENSG00000161132.6"; transcript_id "ENST00000438948.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B444P24.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.10-001"; exon_number 2; exon_id "ENSE00001645155.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150582.2"; havana_transcript "OTTHUMT00000318963.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6720 chr22 HAVANA exon 20291244 20291323 . + . gene_id "ENSG00000161132.6"; transcript_id "ENST00000438948.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B444P24.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.10-001"; exon_number 3; exon_id "ENSE00001614089.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150582.2"; havana_transcript "OTTHUMT00000318963.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6721 chr22 HAVANA exon 20292359 20292440 . + . gene_id "ENSG00000161132.6"; transcript_id "ENST00000438948.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B444P24.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.10-001"; exon_number 4; exon_id "ENSE00001717008.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150582.2"; havana_transcript "OTTHUMT00000318963.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6722 chr22 HAVANA exon 20293988 20294080 . + . gene_id "ENSG00000161132.6"; transcript_id "ENST00000438948.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B444P24.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.10-001"; exon_number 5; exon_id "ENSE00001682940.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150582.2"; havana_transcript "OTTHUMT00000318963.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6723 chr22 HAVANA exon 20294202 20294348 . + . gene_id "ENSG00000161132.6"; transcript_id "ENST00000438948.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B444P24.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.10-001"; exon_number 6; exon_id "ENSE00001721426.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150582.2"; havana_transcript "OTTHUMT00000318963.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6724 chr22 HAVANA exon 20295309 20295484 . + . gene_id "ENSG00000161132.6"; transcript_id "ENST00000438948.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B444P24.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.10-001"; exon_number 7; exon_id "ENSE00001661141.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150582.2"; havana_transcript "OTTHUMT00000318963.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6725 chr22 HAVANA exon 20296813 20296911 . + . gene_id "ENSG00000161132.6"; transcript_id "ENST00000438948.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B444P24.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.10-001"; exon_number 8; exon_id "ENSE00001665724.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150582.2"; havana_transcript "OTTHUMT00000318963.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6726 chr22 HAVANA exon 20300412 20300489 . + . gene_id "ENSG00000161132.6"; transcript_id "ENST00000438948.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B444P24.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.10-001"; exon_number 9; exon_id "ENSE00001598193.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150582.2"; havana_transcript "OTTHUMT00000318963.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6727 chr22 HAVANA exon 20300566 20300739 . + . gene_id "ENSG00000161132.6"; transcript_id "ENST00000438948.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B444P24.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.10-001"; exon_number 10; exon_id "ENSE00001607789.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150582.2"; havana_transcript "OTTHUMT00000318963.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6728 chr22 HAVANA gene 20301799 20307603 . - . gene_id "ENSG00000128185.5"; transcript_id "ENSG00000128185.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L"; level 2; havana_gene "OTTHUMG00000150583.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6729 chr22 HAVANA transcript 20301799 20307603 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6730 chr22 HAVANA exon 20307402 20307603 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; exon_number 1; exon_id "ENSE00001308702.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6731 chr22 HAVANA CDS 20307402 20307511 . - 0 gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; exon_number 1; exon_id "ENSE00001308702.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6732 chr22 HAVANA start_codon 20307509 20307511 . - 0 gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; exon_number 1; exon_id "ENSE00001308702.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6733 chr22 HAVANA exon 20307162 20307322 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; exon_number 2; exon_id "ENSE00001731392.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6734 chr22 HAVANA CDS 20307162 20307322 . - 1 gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; exon_number 2; exon_id "ENSE00001731392.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6735 chr22 HAVANA exon 20303642 20303742 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; exon_number 3; exon_id "ENSE00001599785.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6736 chr22 HAVANA CDS 20303642 20303742 . - 2 gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; exon_number 3; exon_id "ENSE00001599785.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6737 chr22 HAVANA exon 20302859 20302999 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; exon_number 4; exon_id "ENSE00003674176.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6738 chr22 HAVANA CDS 20302859 20302999 . - 0 gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; exon_number 4; exon_id "ENSE00003674176.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6739 chr22 HAVANA exon 20301799 20302347 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; exon_number 5; exon_id "ENSE00001855855.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6740 chr22 HAVANA CDS 20302201 20302347 . - 0 gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; exon_number 5; exon_id "ENSE00001855855.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6741 chr22 HAVANA stop_codon 20302198 20302200 . - 0 gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; exon_number 5; exon_id "ENSE00001855855.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6742 chr22 HAVANA UTR 20307512 20307603 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6743 chr22 HAVANA UTR 20301799 20302200 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000248879.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DGCR6L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13778.1"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318970.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6744 chr22 HAVANA transcript 20301806 20307532 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000405465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DGCR6L-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318985.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6745 chr22 HAVANA exon 20307402 20307532 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000405465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DGCR6L-002"; exon_number 1; exon_id "ENSE00000898990.5"; level 2; tag "basic"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318985.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6746 chr22 HAVANA CDS 20307402 20307511 . - 0 gene_id "ENSG00000128185.5"; transcript_id "ENST00000405465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DGCR6L-002"; exon_number 1; exon_id "ENSE00000898990.5"; level 2; tag "basic"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318985.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6747 chr22 HAVANA start_codon 20307509 20307511 . - 0 gene_id "ENSG00000128185.5"; transcript_id "ENST00000405465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DGCR6L-002"; exon_number 1; exon_id "ENSE00000898990.5"; level 2; tag "basic"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318985.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6748 chr22 HAVANA exon 20307162 20307309 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000405465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DGCR6L-002"; exon_number 2; exon_id "ENSE00001551901.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318985.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6749 chr22 HAVANA CDS 20307162 20307309 . - 1 gene_id "ENSG00000128185.5"; transcript_id "ENST00000405465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DGCR6L-002"; exon_number 2; exon_id "ENSE00001551901.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318985.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6750 chr22 HAVANA exon 20302859 20302999 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000405465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DGCR6L-002"; exon_number 3; exon_id "ENSE00003674176.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318985.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6751 chr22 HAVANA CDS 20302859 20302999 . - 0 gene_id "ENSG00000128185.5"; transcript_id "ENST00000405465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DGCR6L-002"; exon_number 3; exon_id "ENSE00003674176.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318985.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6752 chr22 HAVANA exon 20301806 20302347 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000405465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DGCR6L-002"; exon_number 4; exon_id "ENSE00001903298.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318985.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6753 chr22 HAVANA CDS 20302201 20302347 . - 0 gene_id "ENSG00000128185.5"; transcript_id "ENST00000405465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DGCR6L-002"; exon_number 4; exon_id "ENSE00001903298.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318985.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6754 chr22 HAVANA stop_codon 20302198 20302200 . - 0 gene_id "ENSG00000128185.5"; transcript_id "ENST00000405465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DGCR6L-002"; exon_number 4; exon_id "ENSE00001903298.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318985.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6755 chr22 HAVANA UTR 20307512 20307532 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000405465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DGCR6L-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318985.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6756 chr22 HAVANA UTR 20301806 20302200 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000405465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DGCR6L-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318985.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6757 chr22 HAVANA transcript 20301917 20307603 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000443409.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6L-003"; level 2; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6758 chr22 HAVANA exon 20307402 20307603 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000443409.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6L-003"; exon_number 1; exon_id "ENSE00001308702.3"; level 2; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6759 chr22 HAVANA CDS 20307402 20307511 . - 0 gene_id "ENSG00000128185.5"; transcript_id "ENST00000443409.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6L-003"; exon_number 1; exon_id "ENSE00001308702.3"; level 2; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6760 chr22 HAVANA start_codon 20307509 20307511 . - 0 gene_id "ENSG00000128185.5"; transcript_id "ENST00000443409.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6L-003"; exon_number 1; exon_id "ENSE00001308702.3"; level 2; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6761 chr22 HAVANA exon 20307162 20307322 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000443409.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6L-003"; exon_number 2; exon_id "ENSE00001731392.1"; level 2; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6762 chr22 HAVANA CDS 20307162 20307322 . - 1 gene_id "ENSG00000128185.5"; transcript_id "ENST00000443409.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6L-003"; exon_number 2; exon_id "ENSE00001731392.1"; level 2; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6763 chr22 HAVANA exon 20302859 20302999 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000443409.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6L-003"; exon_number 3; exon_id "ENSE00003641577.1"; level 2; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6764 chr22 HAVANA CDS 20302980 20302999 . - 2 gene_id "ENSG00000128185.5"; transcript_id "ENST00000443409.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6L-003"; exon_number 3; exon_id "ENSE00003641577.1"; level 2; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6765 chr22 HAVANA stop_codon 20302977 20302979 . - 0 gene_id "ENSG00000128185.5"; transcript_id "ENST00000443409.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6L-003"; exon_number 3; exon_id "ENSE00003641577.1"; level 2; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6766 chr22 HAVANA exon 20301917 20302347 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000443409.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6L-003"; exon_number 4; exon_id "ENSE00001684113.1"; level 2; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6767 chr22 HAVANA UTR 20307512 20307603 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000443409.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6L-003"; level 2; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6768 chr22 HAVANA UTR 20302859 20302979 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000443409.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6L-003"; level 2; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6769 chr22 HAVANA UTR 20301917 20302347 . - . gene_id "ENSG00000128185.5"; transcript_id "ENST00000443409.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DGCR6L"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DGCR6L-003"; level 2; havana_gene "OTTHUMG00000150583.3"; havana_transcript "OTTHUMT00000318984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6770 chr22 HAVANA gene 20305642 20306272 . - . gene_id "ENSG00000273343.1"; transcript_id "ENSG00000273343.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "XXbac-B444P24.13"; transcript_type "sense_intronic"; transcript_status "NOVEL"; transcript_name "XXbac-B444P24.13"; level 2; havana_gene "OTTHUMG00000186113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6771 chr22 HAVANA transcript 20305642 20306272 . - . gene_id "ENSG00000273343.1"; transcript_id "ENST00000608275.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "XXbac-B444P24.13"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.13-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186113.1"; havana_transcript "OTTHUMT00000472274.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6772 chr22 HAVANA exon 20305642 20306272 . - . gene_id "ENSG00000273343.1"; transcript_id "ENST00000608275.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "XXbac-B444P24.13"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.13-001"; exon_number 1; exon_id "ENSE00003705457.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186113.1"; havana_transcript "OTTHUMT00000472274.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6773 chr22 HAVANA gene 20308262 20308726 . + . gene_id "ENSG00000273139.1"; transcript_id "ENSG00000273139.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B444P24.14"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "XXbac-B444P24.14"; level 2; havana_gene "OTTHUMG00000186114.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6774 chr22 HAVANA transcript 20308262 20308726 . + . gene_id "ENSG00000273139.1"; transcript_id "ENST00000609632.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B444P24.14"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.14-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186114.1"; havana_transcript "OTTHUMT00000472275.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6775 chr22 HAVANA exon 20308262 20308726 . + . gene_id "ENSG00000273139.1"; transcript_id "ENST00000609632.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B444P24.14"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B444P24.14-001"; exon_number 1; exon_id "ENSE00003708873.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186114.1"; havana_transcript "OTTHUMT00000472275.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6776 chr22 HAVANA gene 20326328 20350457 . + . gene_id "ENSG00000188424.5"; transcript_id "ENSG00000188424.5"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B33L19.3"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "XXbac-B33L19.3"; level 2; havana_gene "OTTHUMG00000150594.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6777 chr22 HAVANA transcript 20326328 20350457 . + . gene_id "ENSG00000188424.5"; transcript_id "ENST00000454636.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B33L19.3"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.3-001"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150594.4"; havana_transcript "OTTHUMT00000319010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6778 chr22 HAVANA exon 20326328 20326539 . + . gene_id "ENSG00000188424.5"; transcript_id "ENST00000454636.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B33L19.3"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.3-001"; exon_number 1; exon_id "ENSE00001625757.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150594.4"; havana_transcript "OTTHUMT00000319010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6779 chr22 HAVANA exon 20328520 20328578 . + . gene_id "ENSG00000188424.5"; transcript_id "ENST00000454636.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B33L19.3"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.3-001"; exon_number 2; exon_id "ENSE00003278620.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150594.4"; havana_transcript "OTTHUMT00000319010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6780 chr22 HAVANA exon 20329047 20329071 . + . gene_id "ENSG00000188424.5"; transcript_id "ENST00000454636.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B33L19.3"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.3-001"; exon_number 3; exon_id "ENSE00003413904.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150594.4"; havana_transcript "OTTHUMT00000319010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6781 chr22 HAVANA exon 20332017 20332103 . + . gene_id "ENSG00000188424.5"; transcript_id "ENST00000454636.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B33L19.3"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.3-001"; exon_number 4; exon_id "ENSE00003426028.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150594.4"; havana_transcript "OTTHUMT00000319010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6782 chr22 HAVANA exon 20337006 20337071 . + . gene_id "ENSG00000188424.5"; transcript_id "ENST00000454636.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B33L19.3"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.3-001"; exon_number 5; exon_id "ENSE00003304118.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150594.4"; havana_transcript "OTTHUMT00000319010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6783 chr22 HAVANA exon 20339072 20339133 . + . gene_id "ENSG00000188424.5"; transcript_id "ENST00000454636.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B33L19.3"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.3-001"; exon_number 6; exon_id "ENSE00003291010.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150594.4"; havana_transcript "OTTHUMT00000319010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6784 chr22 HAVANA exon 20339599 20339632 . + . gene_id "ENSG00000188424.5"; transcript_id "ENST00000454636.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B33L19.3"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.3-001"; exon_number 7; exon_id "ENSE00003256235.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150594.4"; havana_transcript "OTTHUMT00000319010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6785 chr22 HAVANA exon 20341853 20343893 . + . gene_id "ENSG00000188424.5"; transcript_id "ENST00000454636.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B33L19.3"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.3-001"; exon_number 8; exon_id "ENSE00001806492.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150594.4"; havana_transcript "OTTHUMT00000319010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6786 chr22 HAVANA exon 20344427 20344499 . + . gene_id "ENSG00000188424.5"; transcript_id "ENST00000454636.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B33L19.3"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.3-001"; exon_number 9; exon_id "ENSE00001633499.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150594.4"; havana_transcript "OTTHUMT00000319010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
6787 chr22 HAVANA exon 20344726 20344766 . + . gene_id "ENSG00000188424.5"; transcript_id "ENST00000454636.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B33L19.3"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.3-001"; exon_number 10; exon_id "ENSE00001786224.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150594.4"; havana_transcript "OTTHUMT00000319010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6788 chr22 HAVANA exon 20345229 20345383 . + . gene_id "ENSG00000188424.5"; transcript_id "ENST00000454636.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B33L19.3"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.3-001"; exon_number 11; exon_id "ENSE00001652563.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150594.4"; havana_transcript "OTTHUMT00000319010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6789 chr22 HAVANA exon 20350023 20350457 . + . gene_id "ENSG00000188424.5"; transcript_id "ENST00000454636.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "XXbac-B33L19.3"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.3-001"; exon_number 12; exon_id "ENSE00001755897.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150594.4"; havana_transcript "OTTHUMT00000319010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6790 chr22 HAVANA gene 20330726 20331888 . - . gene_id "ENSG00000235578.1"; transcript_id "ENSG00000235578.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B33L19.4"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "XXbac-B33L19.4"; level 1; havana_gene "OTTHUMG00000150605.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6791 chr22 HAVANA transcript 20330726 20331888 . - . gene_id "ENSG00000235578.1"; transcript_id "ENST00000458154.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B33L19.4"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.4-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150605.1"; havana_transcript "OTTHUMT00000319056.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6792 chr22 HAVANA exon 20331756 20331888 . - . gene_id "ENSG00000235578.1"; transcript_id "ENST00000458154.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B33L19.4"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.4-001"; exon_number 1; exon_id "ENSE00001739384.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150605.1"; havana_transcript "OTTHUMT00000319056.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6793 chr22 HAVANA exon 20330726 20331038 . - . gene_id "ENSG00000235578.1"; transcript_id "ENST00000458154.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B33L19.4"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.4-001"; exon_number 2; exon_id "ENSE00001745438.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150605.1"; havana_transcript "OTTHUMT00000319056.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6794 chr22 HAVANA gene 20336866 20341114 . - . gene_id "ENSG00000230410.1"; transcript_id "ENSG00000230410.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B33L19.6"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "XXbac-B33L19.6"; level 2; havana_gene "OTTHUMG00000150610.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6795 chr22 HAVANA transcript 20336866 20338449 . - . gene_id "ENSG00000230410.1"; transcript_id "ENST00000451267.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B33L19.6"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.6-001"; level 2; havana_gene "OTTHUMG00000150610.3"; havana_transcript "OTTHUMT00000319069.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6796 chr22 HAVANA exon 20338334 20338449 . - . gene_id "ENSG00000230410.1"; transcript_id "ENST00000451267.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B33L19.6"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.6-001"; exon_number 1; exon_id "ENSE00001676935.1"; level 2; havana_gene "OTTHUMG00000150610.3"; havana_transcript "OTTHUMT00000319069.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6797 chr22 HAVANA exon 20336866 20337124 . - . gene_id "ENSG00000230410.1"; transcript_id "ENST00000451267.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B33L19.6"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.6-001"; exon_number 2; exon_id "ENSE00001618965.1"; level 2; havana_gene "OTTHUMG00000150610.3"; havana_transcript "OTTHUMT00000319069.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6798 chr22 HAVANA transcript 20337736 20341114 . - . gene_id "ENSG00000230410.1"; transcript_id "ENST00000429995.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B33L19.6"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.6-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150610.3"; havana_transcript "OTTHUMT00000319068.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6799 chr22 HAVANA exon 20341010 20341114 . - . gene_id "ENSG00000230410.1"; transcript_id "ENST00000429995.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B33L19.6"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.6-002"; exon_number 1; exon_id "ENSE00001593706.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150610.3"; havana_transcript "OTTHUMT00000319068.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6800 chr22 HAVANA exon 20337736 20338450 . - . gene_id "ENSG00000230410.1"; transcript_id "ENST00000429995.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B33L19.6"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.6-002"; exon_number 2; exon_id "ENSE00001724131.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150610.3"; havana_transcript "OTTHUMT00000319068.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6801 chr22 HAVANA gene 20366206 20368028 . - . gene_id "ENSG00000183038.9"; transcript_id "ENSG00000183038.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3"; level 2; havana_gene "OTTHUMG00000150614.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6802 chr22 ENSEMBL transcript 20366206 20367797 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000424787.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150614.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6803 chr22 ENSEMBL exon 20367589 20367797 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000424787.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-201"; exon_number 1; exon_id "ENSE00002268799.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150614.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6804 chr22 ENSEMBL CDS 20367589 20367797 . - 0 gene_id "ENSG00000183038.9"; transcript_id "ENST00000424787.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-201"; exon_number 1; exon_id "ENSE00002268799.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150614.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6805 chr22 ENSEMBL exon 20367229 20367356 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000424787.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-201"; exon_number 2; exon_id "ENSE00001697456.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150614.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6806 chr22 ENSEMBL CDS 20367229 20367356 . - 1 gene_id "ENSG00000183038.9"; transcript_id "ENST00000424787.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-201"; exon_number 2; exon_id "ENSE00001697456.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150614.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6807 chr22 ENSEMBL exon 20367014 20367126 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000424787.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-201"; exon_number 3; exon_id "ENSE00001645336.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150614.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6808 chr22 ENSEMBL CDS 20367014 20367126 . - 2 gene_id "ENSG00000183038.9"; transcript_id "ENST00000424787.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-201"; exon_number 3; exon_id "ENSE00001645336.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150614.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6809 chr22 ENSEMBL exon 20366819 20366932 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000424787.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-201"; exon_number 4; exon_id "ENSE00001741087.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150614.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6810 chr22 ENSEMBL CDS 20366819 20366932 . - 0 gene_id "ENSG00000183038.9"; transcript_id "ENST00000424787.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-201"; exon_number 4; exon_id "ENSE00001741087.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150614.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6811 chr22 ENSEMBL exon 20366206 20366514 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000424787.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-201"; exon_number 5; exon_id "ENSE00001759514.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150614.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6812 chr22 ENSEMBL CDS 20366371 20366514 . - 0 gene_id "ENSG00000183038.9"; transcript_id "ENST00000424787.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-201"; exon_number 5; exon_id "ENSE00001759514.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150614.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6813 chr22 ENSEMBL stop_codon 20366368 20366370 . - 0 gene_id "ENSG00000183038.9"; transcript_id "ENST00000424787.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-201"; exon_number 5; exon_id "ENSE00001759514.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150614.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6814 chr22 ENSEMBL UTR 20366206 20366370 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000424787.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150614.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6815 chr22 HAVANA transcript 20366211 20368028 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6816 chr22 HAVANA exon 20367930 20368028 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; exon_number 1; exon_id "ENSE00001595175.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6817 chr22 HAVANA exon 20367589 20367798 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; exon_number 2; exon_id "ENSE00001683366.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6818 chr22 HAVANA CDS 20367589 20367764 . - 0 gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; exon_number 2; exon_id "ENSE00001683366.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6819 chr22 HAVANA start_codon 20367762 20367764 . - 0 gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; exon_number 2; exon_id "ENSE00001683366.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6820 chr22 HAVANA exon 20367229 20367356 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; exon_number 3; exon_id "ENSE00001697456.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6821 chr22 HAVANA CDS 20367229 20367356 . - 1 gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; exon_number 3; exon_id "ENSE00001697456.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6822 chr22 HAVANA exon 20367014 20367126 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; exon_number 4; exon_id "ENSE00001645336.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6823 chr22 HAVANA CDS 20367014 20367126 . - 2 gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; exon_number 4; exon_id "ENSE00001645336.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6824 chr22 HAVANA exon 20366819 20366932 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; exon_number 5; exon_id "ENSE00001741087.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6825 chr22 HAVANA CDS 20366819 20366932 . - 0 gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; exon_number 5; exon_id "ENSE00001741087.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6826 chr22 HAVANA exon 20366211 20366514 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; exon_number 6; exon_id "ENSE00001603419.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6827 chr22 HAVANA CDS 20366371 20366514 . - 0 gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; exon_number 6; exon_id "ENSE00001603419.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6828 chr22 HAVANA stop_codon 20366368 20366370 . - 0 gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; exon_number 6; exon_id "ENSE00001603419.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6829 chr22 HAVANA UTR 20367930 20368028 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6830 chr22 HAVANA UTR 20367765 20367798 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6831 chr22 HAVANA UTR 20366211 20366370 . - . gene_id "ENSG00000183038.9"; transcript_id "ENST00000404912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC3-001"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150614.2"; havana_transcript "OTTHUMT00000319077.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6832 chr22 HAVANA gene 20377669 20378803 . + . gene_id "ENSG00000235704.1"; transcript_id "ENSG00000235704.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.2"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AC023490.2"; level 1; havana_gene "OTTHUMG00000150646.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6833 chr22 HAVANA transcript 20377669 20378803 . + . gene_id "ENSG00000235704.1"; transcript_id "ENST00000426653.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.2-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150646.4"; havana_transcript "OTTHUMT00000322210.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6834 chr22 HAVANA exon 20377669 20378143 . + . gene_id "ENSG00000235704.1"; transcript_id "ENST00000426653.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.2-001"; exon_number 1; exon_id "ENSE00001795282.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150646.4"; havana_transcript "OTTHUMT00000322210.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6835 chr22 HAVANA exon 20378426 20378803 . + . gene_id "ENSG00000235704.1"; transcript_id "ENST00000426653.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.2-001"; exon_number 2; exon_id "ENSE00001732313.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150646.4"; havana_transcript "OTTHUMT00000322210.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6836 chr22 HAVANA gene 20378814 20380440 . + . gene_id "ENSG00000206176.5"; transcript_id "ENSG00000206176.5"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AC023490.1"; level 1; havana_gene "OTTHUMG00000152507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6837 chr22 HAVANA transcript 20378814 20380089 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000424812.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-004"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319436.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6838 chr22 HAVANA exon 20378814 20378960 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000424812.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-004"; exon_number 1; exon_id "ENSE00001735779.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319436.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6839 chr22 HAVANA exon 20379308 20379364 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000424812.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-004"; exon_number 2; exon_id "ENSE00001596001.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319436.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6840 chr22 HAVANA exon 20379473 20379591 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000424812.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-004"; exon_number 3; exon_id "ENSE00001769837.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319436.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6841 chr22 HAVANA exon 20379803 20379875 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000424812.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-004"; exon_number 4; exon_id "ENSE00003610009.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319436.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6842 chr22 HAVANA exon 20380023 20380089 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000424812.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-004"; exon_number 5; exon_id "ENSE00001620063.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319436.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6843 chr22 HAVANA transcript 20378909 20380045 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000448747.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-005"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319437.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6844 chr22 HAVANA exon 20378909 20378960 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000448747.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-005"; exon_number 1; exon_id "ENSE00001660986.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319437.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6845 chr22 HAVANA exon 20379308 20379364 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000448747.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-005"; exon_number 2; exon_id "ENSE00001596001.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319437.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6846 chr22 HAVANA exon 20379473 20379556 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000448747.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-005"; exon_number 3; exon_id "ENSE00001672099.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319437.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6847 chr22 HAVANA exon 20379659 20379723 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000448747.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-005"; exon_number 4; exon_id "ENSE00001789603.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319437.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6848 chr22 HAVANA exon 20379803 20379875 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000448747.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-005"; exon_number 5; exon_id "ENSE00003610009.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319437.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6849 chr22 HAVANA exon 20380023 20380045 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000448747.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-005"; exon_number 6; exon_id "ENSE00001669661.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319437.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6850 chr22 HAVANA transcript 20378933 20380071 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000412928.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-001"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319430.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6851 chr22 HAVANA exon 20378933 20378960 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000412928.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-001"; exon_number 1; exon_id "ENSE00001626040.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319430.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6852 chr22 HAVANA exon 20379308 20379364 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000412928.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-001"; exon_number 2; exon_id "ENSE00001596001.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319430.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6853 chr22 HAVANA exon 20379473 20379591 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000412928.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-001"; exon_number 3; exon_id "ENSE00001769837.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319430.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6854 chr22 HAVANA exon 20379803 20380071 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000412928.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-001"; exon_number 4; exon_id "ENSE00001628007.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319430.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6855 chr22 HAVANA transcript 20378938 20380071 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000436846.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-003"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6856 chr22 HAVANA exon 20378938 20378960 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000436846.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-003"; exon_number 1; exon_id "ENSE00001700279.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6857 chr22 HAVANA exon 20379308 20379364 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000436846.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-003"; exon_number 2; exon_id "ENSE00001596001.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6858 chr22 HAVANA exon 20379473 20379591 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000436846.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-003"; exon_number 3; exon_id "ENSE00001769837.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6859 chr22 HAVANA exon 20379803 20379875 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000436846.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-003"; exon_number 4; exon_id "ENSE00003610009.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6860 chr22 HAVANA exon 20380023 20380071 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000436846.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-003"; exon_number 5; exon_id "ENSE00001708391.1"; level 2; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6861 chr22 HAVANA transcript 20379276 20380440 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000438669.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6862 chr22 HAVANA exon 20379276 20379364 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000438669.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-002"; exon_number 1; exon_id "ENSE00001654177.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6863 chr22 HAVANA exon 20379473 20379591 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000438669.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-002"; exon_number 2; exon_id "ENSE00001769837.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6864 chr22 HAVANA exon 20379803 20380063 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000438669.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-002"; exon_number 3; exon_id "ENSE00001724140.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6865 chr22 HAVANA exon 20380122 20380440 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000438669.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-002"; exon_number 4; exon_id "ENSE00001738952.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000152507.1"; havana_transcript "OTTHUMT00000319431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6866 chr22 ENSEMBL transcript 20379677 20380438 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000544204.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-201"; level 3; havana_gene "OTTHUMG00000152507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6867 chr22 ENSEMBL exon 20379677 20379723 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000544204.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-201"; exon_number 1; exon_id "ENSE00002288717.1"; level 3; havana_gene "OTTHUMG00000152507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6868 chr22 ENSEMBL exon 20379803 20379875 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000544204.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-201"; exon_number 2; exon_id "ENSE00003540619.1"; level 3; havana_gene "OTTHUMG00000152507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6869 chr22 ENSEMBL exon 20380023 20380063 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000544204.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-201"; exon_number 3; exon_id "ENSE00002275442.1"; level 3; havana_gene "OTTHUMG00000152507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6870 chr22 ENSEMBL exon 20380122 20380438 . + . gene_id "ENSG00000206176.5"; transcript_id "ENST00000544204.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC023490.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC023490.1-201"; exon_number 4; exon_id "ENSE00002234007.1"; level 3; havana_gene "OTTHUMG00000152507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6871 chr22 HAVANA gene 20383524 20427835 . - . gene_id "ENSG00000215513.7"; transcript_id "ENSG00000215513.7"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1"; level 2; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6872 chr22 HAVANA transcript 20383524 20387658 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452435.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PI4KAP1-007"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6873 chr22 HAVANA exon 20385726 20387658 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452435.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PI4KAP1-007"; exon_number 1; exon_id "ENSE00001788687.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6874 chr22 HAVANA exon 20385112 20385195 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452435.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PI4KAP1-007"; exon_number 2; exon_id "ENSE00001617597.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6875 chr22 HAVANA exon 20383524 20383920 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452435.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PI4KAP1-007"; exon_number 3; exon_id "ENSE00001773894.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319575.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6876 chr22 HAVANA transcript 20383524 20387732 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000455715.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-006"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319574.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6877 chr22 HAVANA exon 20386517 20387732 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000455715.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-006"; exon_number 1; exon_id "ENSE00001709678.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319574.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6878 chr22 HAVANA exon 20385726 20385815 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000455715.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-006"; exon_number 2; exon_id "ENSE00001720839.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319574.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6879 chr22 HAVANA exon 20385112 20385195 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000455715.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-006"; exon_number 3; exon_id "ENSE00001617597.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319574.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6880 chr22 HAVANA exon 20383524 20383920 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000455715.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-006"; exon_number 4; exon_id "ENSE00001773894.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319574.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6881 chr22 HAVANA transcript 20383524 20398220 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6882 chr22 HAVANA exon 20398185 20398220 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; exon_number 1; exon_id "ENSE00001749186.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6883 chr22 HAVANA exon 20397878 20397985 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; exon_number 2; exon_id "ENSE00003574943.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6884 chr22 HAVANA exon 20397113 20397288 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; exon_number 3; exon_id "ENSE00001794689.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6885 chr22 HAVANA exon 20394519 20394648 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; exon_number 4; exon_id "ENSE00003534332.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6886 chr22 HAVANA exon 20393534 20393604 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; exon_number 5; exon_id "ENSE00003564007.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6887 chr22 HAVANA exon 20390440 20390512 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; exon_number 6; exon_id "ENSE00001692373.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6888 chr22 HAVANA exon 20390269 20390339 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; exon_number 7; exon_id "ENSE00001689647.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6889 chr22 HAVANA exon 20389095 20389204 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; exon_number 8; exon_id "ENSE00003591209.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6890 chr22 HAVANA exon 20388507 20388611 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; exon_number 9; exon_id "ENSE00003517624.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6891 chr22 HAVANA exon 20388300 20388425 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; exon_number 10; exon_id "ENSE00003583738.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6892 chr22 HAVANA exon 20386517 20387279 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; exon_number 11; exon_id "ENSE00003516771.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6893 chr22 HAVANA exon 20385726 20385815 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; exon_number 12; exon_id "ENSE00001720839.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6894 chr22 HAVANA exon 20385112 20385195 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; exon_number 13; exon_id "ENSE00001617597.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6895 chr22 HAVANA exon 20383524 20383920 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000452110.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-002"; exon_number 14; exon_id "ENSE00001773894.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318947.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6896 chr22 HAVANA transcript 20383538 20398695 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6897 chr22 HAVANA exon 20398537 20398695 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 1; exon_id "ENSE00003140935.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6898 chr22 HAVANA exon 20398185 20398336 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 2; exon_id "ENSE00003565076.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6899 chr22 HAVANA exon 20397878 20397985 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 3; exon_id "ENSE00003574943.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6900 chr22 HAVANA exon 20397113 20397240 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 4; exon_id "ENSE00003613469.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6901 chr22 HAVANA exon 20394519 20394648 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 5; exon_id "ENSE00003534332.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6902 chr22 HAVANA exon 20393534 20393604 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 6; exon_id "ENSE00003564007.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6903 chr22 HAVANA exon 20390440 20390512 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 7; exon_id "ENSE00001692373.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6904 chr22 HAVANA exon 20390269 20390339 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 8; exon_id "ENSE00001689647.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6905 chr22 HAVANA exon 20389095 20389204 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 9; exon_id "ENSE00003591209.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6906 chr22 HAVANA exon 20388507 20388611 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 10; exon_id "ENSE00003517624.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6907 chr22 HAVANA exon 20388300 20388425 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 11; exon_id "ENSE00003583738.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6908 chr22 HAVANA exon 20386517 20387279 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 12; exon_id "ENSE00003516771.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6909 chr22 HAVANA exon 20385726 20385815 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 13; exon_id "ENSE00001720839.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6910 chr22 HAVANA exon 20385112 20385195 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 14; exon_id "ENSE00001617597.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6911 chr22 HAVANA exon 20383538 20383920 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000430523.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-005"; exon_number 15; exon_id "ENSE00001659775.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319534.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6912 chr22 ENSEMBL transcript 20383538 20402426 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6913 chr22 ENSEMBL exon 20402397 20402426 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 1; exon_id "ENSE00002320040.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6914 chr22 ENSEMBL exon 20402340 20402391 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 2; exon_id "ENSE00002235262.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6915 chr22 ENSEMBL exon 20398537 20398694 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 3; exon_id "ENSE00003510192.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6916 chr22 ENSEMBL exon 20398185 20398336 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 4; exon_id "ENSE00003535298.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6917 chr22 ENSEMBL exon 20397878 20397985 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 5; exon_id "ENSE00003520314.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6918 chr22 ENSEMBL exon 20397113 20397240 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 6; exon_id "ENSE00003599392.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6919 chr22 ENSEMBL exon 20394519 20394648 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 7; exon_id "ENSE00003663164.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6920 chr22 ENSEMBL exon 20393534 20393604 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 8; exon_id "ENSE00003504652.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6921 chr22 ENSEMBL exon 20390444 20390512 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 9; exon_id "ENSE00002295054.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6922 chr22 ENSEMBL exon 20390269 20390346 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 10; exon_id "ENSE00002280997.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6923 chr22 ENSEMBL exon 20389095 20389204 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 11; exon_id "ENSE00003459819.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6924 chr22 ENSEMBL exon 20388507 20388611 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 12; exon_id "ENSE00003501217.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6925 chr22 ENSEMBL exon 20388300 20388425 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 13; exon_id "ENSE00003484675.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6926 chr22 ENSEMBL exon 20386517 20387279 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 14; exon_id "ENSE00003462768.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6927 chr22 ENSEMBL exon 20385726 20385815 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 15; exon_id "ENSE00001720839.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6928 chr22 ENSEMBL exon 20385112 20385195 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 16; exon_id "ENSE00001617597.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6929 chr22 ENSEMBL exon 20383538 20383920 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000437178.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-201"; exon_number 17; exon_id "ENSE00001659775.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6930 chr22 ENSEMBL transcript 20383538 20402426 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000544467.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-202"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6931 chr22 ENSEMBL exon 20402397 20402426 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000544467.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-202"; exon_number 1; exon_id "ENSE00002320040.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6932 chr22 ENSEMBL exon 20402340 20402391 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000544467.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-202"; exon_number 2; exon_id "ENSE00002235262.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6933 chr22 ENSEMBL exon 20394519 20394648 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000544467.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-202"; exon_number 3; exon_id "ENSE00003663164.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6934 chr22 ENSEMBL exon 20393534 20393604 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000544467.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-202"; exon_number 4; exon_id "ENSE00003504652.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6935 chr22 ENSEMBL exon 20390444 20390512 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000544467.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-202"; exon_number 5; exon_id "ENSE00002295054.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6936 chr22 ENSEMBL exon 20390269 20390346 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000544467.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-202"; exon_number 6; exon_id "ENSE00002280997.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6937 chr22 ENSEMBL exon 20389095 20389204 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000544467.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-202"; exon_number 7; exon_id "ENSE00003459819.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6938 chr22 ENSEMBL exon 20388507 20388611 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000544467.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-202"; exon_number 8; exon_id "ENSE00003501217.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6939 chr22 ENSEMBL exon 20388300 20388425 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000544467.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-202"; exon_number 9; exon_id "ENSE00003484675.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6940 chr22 ENSEMBL exon 20386517 20387279 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000544467.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-202"; exon_number 10; exon_id "ENSE00003462768.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6941 chr22 ENSEMBL exon 20385726 20385815 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000544467.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-202"; exon_number 11; exon_id "ENSE00001720839.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6942 chr22 ENSEMBL exon 20385112 20385195 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000544467.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-202"; exon_number 12; exon_id "ENSE00001617597.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6943 chr22 ENSEMBL exon 20383538 20383920 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000544467.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-202"; exon_number 13; exon_id "ENSE00001659775.1"; level 3; havana_gene "OTTHUMG00000150569.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6944 chr22 HAVANA transcript 20383872 20398665 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6945 chr22 HAVANA exon 20398537 20398665 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 1; exon_id "ENSE00001694151.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6946 chr22 HAVANA exon 20398185 20398336 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 2; exon_id "ENSE00003565076.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6947 chr22 HAVANA exon 20397878 20397985 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 3; exon_id "ENSE00003574943.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6948 chr22 HAVANA exon 20397113 20397240 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 4; exon_id "ENSE00003613469.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6949 chr22 HAVANA exon 20394519 20394648 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 5; exon_id "ENSE00003534332.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6950 chr22 HAVANA exon 20393534 20393604 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 6; exon_id "ENSE00003564007.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6951 chr22 HAVANA exon 20390440 20390512 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 7; exon_id "ENSE00001692373.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6952 chr22 HAVANA exon 20390269 20390339 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 8; exon_id "ENSE00001689647.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6953 chr22 HAVANA exon 20389095 20389204 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 9; exon_id "ENSE00003591209.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6954 chr22 HAVANA exon 20388507 20388611 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 10; exon_id "ENSE00003517624.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6955 chr22 HAVANA exon 20388300 20388425 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 11; exon_id "ENSE00003583738.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6956 chr22 HAVANA exon 20387162 20387279 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 12; exon_id "ENSE00001747114.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6957 chr22 HAVANA exon 20386517 20386675 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 13; exon_id "ENSE00001720582.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6958 chr22 HAVANA exon 20385726 20385815 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 14; exon_id "ENSE00001720839.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6959 chr22 HAVANA exon 20385112 20385195 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 15; exon_id "ENSE00001617597.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6960 chr22 HAVANA exon 20383872 20383920 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000400467.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP1-001"; exon_number 16; exon_id "ENSE00001738019.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000318946.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6961 chr22 HAVANA transcript 20387890 20424567 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000416922.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-004"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319533.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6962 chr22 HAVANA exon 20424442 20424567 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000416922.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-004"; exon_number 1; exon_id "ENSE00001736025.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319533.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
6963 chr22 HAVANA exon 20402340 20402440 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000416922.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-004"; exon_number 2; exon_id "ENSE00001797420.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319533.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6964 chr22 HAVANA exon 20398537 20398694 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000416922.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-004"; exon_number 3; exon_id "ENSE00003517199.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319533.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6965 chr22 HAVANA exon 20398185 20398336 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000416922.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-004"; exon_number 4; exon_id "ENSE00003565076.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319533.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6966 chr22 HAVANA exon 20397878 20397985 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000416922.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-004"; exon_number 5; exon_id "ENSE00003574943.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319533.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6967 chr22 HAVANA exon 20397113 20397240 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000416922.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-004"; exon_number 6; exon_id "ENSE00003613469.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319533.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6968 chr22 HAVANA exon 20394519 20394648 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000416922.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-004"; exon_number 7; exon_id "ENSE00003534332.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319533.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6969 chr22 HAVANA exon 20393534 20393604 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000416922.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-004"; exon_number 8; exon_id "ENSE00003564007.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319533.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6970 chr22 HAVANA exon 20390440 20390512 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000416922.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-004"; exon_number 9; exon_id "ENSE00001692373.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319533.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6971 chr22 HAVANA exon 20390269 20390339 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000416922.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-004"; exon_number 10; exon_id "ENSE00001689647.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319533.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6972 chr22 HAVANA exon 20389095 20389204 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000416922.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-004"; exon_number 11; exon_id "ENSE00003591209.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319533.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6973 chr22 HAVANA exon 20388507 20388611 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000416922.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-004"; exon_number 12; exon_id "ENSE00003517624.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319533.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6974 chr22 HAVANA exon 20387890 20388425 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000416922.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-004"; exon_number 13; exon_id "ENSE00001678983.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319533.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6975 chr22 HAVANA transcript 20387923 20427835 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000438765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-003"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319513.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6976 chr22 HAVANA exon 20427640 20427835 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000438765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-003"; exon_number 1; exon_id "ENSE00001762439.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319513.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6977 chr22 HAVANA exon 20402340 20402440 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000438765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-003"; exon_number 2; exon_id "ENSE00001797420.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319513.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6978 chr22 HAVANA exon 20398537 20398694 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000438765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-003"; exon_number 3; exon_id "ENSE00003517199.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319513.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6979 chr22 HAVANA exon 20398185 20398336 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000438765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-003"; exon_number 4; exon_id "ENSE00003565076.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319513.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6980 chr22 HAVANA exon 20397878 20397985 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000438765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-003"; exon_number 5; exon_id "ENSE00003574943.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319513.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6981 chr22 HAVANA exon 20397113 20397240 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000438765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-003"; exon_number 6; exon_id "ENSE00003613469.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319513.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6982 chr22 HAVANA exon 20394519 20394648 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000438765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-003"; exon_number 7; exon_id "ENSE00003534332.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319513.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6983 chr22 HAVANA exon 20393534 20393604 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000438765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-003"; exon_number 8; exon_id "ENSE00003564007.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319513.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6984 chr22 HAVANA exon 20390440 20390512 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000438765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-003"; exon_number 9; exon_id "ENSE00001692373.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319513.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6985 chr22 HAVANA exon 20390269 20390339 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000438765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-003"; exon_number 10; exon_id "ENSE00001689647.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319513.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6986 chr22 HAVANA exon 20389095 20389204 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000438765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-003"; exon_number 11; exon_id "ENSE00003591209.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319513.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6987 chr22 HAVANA exon 20388507 20388611 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000438765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-003"; exon_number 12; exon_id "ENSE00003517624.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319513.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6988 chr22 HAVANA exon 20387923 20388425 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000438765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP1-003"; exon_number 13; exon_id "ENSE00001777551.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319513.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6989 chr22 HAVANA transcript 20397878 20398637 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000418108.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PI4KAP1-008"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319576.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6990 chr22 HAVANA exon 20398537 20398637 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000418108.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PI4KAP1-008"; exon_number 1; exon_id "ENSE00001704478.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319576.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6991 chr22 HAVANA exon 20397878 20398336 . - . gene_id "ENSG00000215513.7"; transcript_id "ENST00000418108.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PI4KAP1-008"; exon_number 2; exon_id "ENSE00001744826.1"; level 2; havana_gene "OTTHUMG00000150569.8"; havana_transcript "OTTHUMT00000319576.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6992 chr22 ENSEMBL gene 20434077 20434153 . - . gene_id "ENSG00000271796.1"; transcript_id "ENSG00000271796.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6993 chr22 ENSEMBL transcript 20434077 20434153 . - . gene_id "ENSG00000271796.1"; transcript_id "ENST00000606583.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.469-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6994 chr22 ENSEMBL exon 20434077 20434153 . - . gene_id "ENSG00000271796.1"; transcript_id "ENST00000606583.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.469-201"; exon_number 1; exon_id "ENSE00003698793.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6995 chr22 ENSEMBL gene 20455222 20455364 . + . gene_id "ENSG00000252571.1"; transcript_id "ENSG00000252571.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA17"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA17"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6996 chr22 ENSEMBL transcript 20455222 20455364 . + . gene_id "ENSG00000252571.1"; transcript_id "ENST00000516762.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA17"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA17.4-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6997 chr22 ENSEMBL exon 20455222 20455364 . + . gene_id "ENSG00000252571.1"; transcript_id "ENST00000516762.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA17"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA17.4-201"; exon_number 1; exon_id "ENSE00002089039.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6998 chr22 ENSEMBL gene 20455450 20455532 . + . gene_id "ENSG00000252024.1"; transcript_id "ENSG00000252024.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA18"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA18"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
6999 chr22 ENSEMBL transcript 20455450 20455532 . + . gene_id "ENSG00000252024.1"; transcript_id "ENST00000516215.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA18"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA18.1-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7000 chr22 ENSEMBL exon 20455450 20455532 . + . gene_id "ENSG00000252024.1"; transcript_id "ENST00000516215.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA18"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA18.1-201"; exon_number 1; exon_id "ENSE00002088492.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7001 chr22 ENSEMBL gene 20455669 20455969 . - . gene_id "ENSG00000199876.1"; transcript_id "ENSG00000199876.1"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SKP131"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SKP131"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7002 chr22 ENSEMBL transcript 20455669 20455969 . - . gene_id "ENSG00000199876.1"; transcript_id "ENST00000363006.1"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SKP131"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SKP131-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7003 chr22 ENSEMBL exon 20455669 20455969 . - . gene_id "ENSG00000199876.1"; transcript_id "ENST00000363006.1"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SKP131"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SKP131-201"; exon_number 1; exon_id "ENSE00001808777.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7004 chr22 HAVANA gene 20456003 20461786 . - . gene_id "ENSG00000196622.6"; transcript_id "ENSG00000196622.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3"; level 2; havana_gene "OTTHUMG00000150568.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7005 chr22 HAVANA transcript 20456003 20461786 . - . gene_id "ENSG00000196622.6"; transcript_id "ENST00000426804.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46665.1"; havana_gene "OTTHUMG00000150568.2"; havana_transcript "OTTHUMT00000318945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7006 chr22 HAVANA exon 20456003 20461786 . - . gene_id "ENSG00000196622.6"; transcript_id "ENST00000426804.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3-001"; exon_number 1; exon_id "ENSE00001688112.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46665.1"; havana_gene "OTTHUMG00000150568.2"; havana_transcript "OTTHUMT00000318945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7007 chr22 HAVANA CDS 20456385 20461301 . - 0 gene_id "ENSG00000196622.6"; transcript_id "ENST00000426804.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3-001"; exon_number 1; exon_id "ENSE00001688112.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46665.1"; havana_gene "OTTHUMG00000150568.2"; havana_transcript "OTTHUMT00000318945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7008 chr22 HAVANA start_codon 20461299 20461301 . - 0 gene_id "ENSG00000196622.6"; transcript_id "ENST00000426804.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3-001"; exon_number 1; exon_id "ENSE00001688112.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46665.1"; havana_gene "OTTHUMG00000150568.2"; havana_transcript "OTTHUMT00000318945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7009 chr22 HAVANA stop_codon 20456382 20456384 . - 0 gene_id "ENSG00000196622.6"; transcript_id "ENST00000426804.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3-001"; exon_number 1; exon_id "ENSE00001688112.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46665.1"; havana_gene "OTTHUMG00000150568.2"; havana_transcript "OTTHUMT00000318945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7010 chr22 HAVANA UTR 20456003 20456384 . - . gene_id "ENSG00000196622.6"; transcript_id "ENST00000426804.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46665.1"; havana_gene "OTTHUMG00000150568.2"; havana_transcript "OTTHUMT00000318945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7011 chr22 HAVANA UTR 20461302 20461786 . - . gene_id "ENSG00000196622.6"; transcript_id "ENST00000426804.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46665.1"; havana_gene "OTTHUMG00000150568.2"; havana_transcript "OTTHUMT00000318945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7012 chr22 HAVANA gene 20473206 20475156 . - . gene_id "ENSG00000236984.1"; transcript_id "ENSG00000236984.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B33L19.10"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.10"; level 2; havana_gene "OTTHUMG00000151314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7013 chr22 HAVANA transcript 20473206 20475156 . - . gene_id "ENSG00000236984.1"; transcript_id "ENST00000434754.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B33L19.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.10-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151314.1"; havana_transcript "OTTHUMT00000322208.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7014 chr22 HAVANA exon 20474881 20475156 . - . gene_id "ENSG00000236984.1"; transcript_id "ENST00000434754.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B33L19.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.10-001"; exon_number 1; exon_id "ENSE00001735678.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151314.1"; havana_transcript "OTTHUMT00000322208.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7015 chr22 HAVANA exon 20474495 20474639 . - . gene_id "ENSG00000236984.1"; transcript_id "ENST00000434754.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B33L19.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.10-001"; exon_number 2; exon_id "ENSE00001599043.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151314.1"; havana_transcript "OTTHUMT00000322208.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7016 chr22 HAVANA exon 20473843 20474006 . - . gene_id "ENSG00000236984.1"; transcript_id "ENST00000434754.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B33L19.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.10-001"; exon_number 3; exon_id "ENSE00001733278.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151314.1"; havana_transcript "OTTHUMT00000322208.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7017 chr22 HAVANA exon 20473206 20473378 . - . gene_id "ENSG00000236984.1"; transcript_id "ENST00000434754.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B33L19.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B33L19.10-001"; exon_number 4; exon_id "ENSE00001785985.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151314.1"; havana_transcript "OTTHUMT00000322208.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7018 chr22 HAVANA gene 20486312 20488882 . - . gene_id "ENSG00000234757.1"; transcript_id "ENSG00000234757.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P2"; level 2; havana_gene "OTTHUMG00000154640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7019 chr22 HAVANA transcript 20486312 20488882 . - . gene_id "ENSG00000234757.1"; transcript_id "ENST00000424817.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P2"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P2-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000154640.1"; havana_transcript "OTTHUMT00000336432.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7020 chr22 HAVANA exon 20488838 20488882 . - . gene_id "ENSG00000234757.1"; transcript_id "ENST00000424817.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P2"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P2-001"; exon_number 1; exon_id "ENSE00001785709.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000154640.1"; havana_transcript "OTTHUMT00000336432.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7021 chr22 HAVANA exon 20488105 20488272 . - . gene_id "ENSG00000234757.1"; transcript_id "ENST00000424817.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P2"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P2-001"; exon_number 2; exon_id "ENSE00001750657.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000154640.1"; havana_transcript "OTTHUMT00000336432.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7022 chr22 HAVANA exon 20487359 20487529 . - . gene_id "ENSG00000234757.1"; transcript_id "ENST00000424817.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P2"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P2-001"; exon_number 3; exon_id "ENSE00001794196.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000154640.1"; havana_transcript "OTTHUMT00000336432.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7023 chr22 HAVANA exon 20487191 20487255 . - . gene_id "ENSG00000234757.1"; transcript_id "ENST00000424817.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P2"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P2-001"; exon_number 4; exon_id "ENSE00001693106.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000154640.1"; havana_transcript "OTTHUMT00000336432.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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7024 chr22 HAVANA exon 20486779 20486847 . - . gene_id "ENSG00000234757.1"; transcript_id "ENST00000424817.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P2"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P2-001"; exon_number 5; exon_id "ENSE00001613872.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000154640.1"; havana_transcript "OTTHUMT00000336432.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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7025 chr22 HAVANA exon 20486312 20486672 . - . gene_id "ENSG00000234757.1"; transcript_id "ENST00000424817.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CA15P2"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CA15P2-001"; exon_number 6; exon_id "ENSE00001771998.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000154640.1"; havana_transcript "OTTHUMT00000336432.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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7026 chr22 HAVANA gene 20499890 20503484 . - . gene_id "ENSG00000225894.1"; transcript_id "ENSG00000225894.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PPP1R26P2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "PPP1R26P2"; level 2; havana_gene "OTTHUMG00000151315.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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7027 chr22 HAVANA transcript 20499890 20503484 . - . gene_id "ENSG00000225894.1"; transcript_id "ENST00000458527.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PPP1R26P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "PPP1R26P2-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000151315.2"; havana_transcript "OTTHUMT00000322209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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7028 chr22 HAVANA exon 20499890 20503484 . - . gene_id "ENSG00000225894.1"; transcript_id "ENST00000458527.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PPP1R26P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "PPP1R26P2-001"; exon_number 1; exon_id "ENSE00001708286.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000151315.2"; havana_transcript "OTTHUMT00000322209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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7029 chr22 HAVANA gene 20610447 20616201 . + . gene_id "ENSG00000216522.3"; transcript_id "ENSG00000216522.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC011718.1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC011718.1"; level 2; havana_gene "OTTHUMG00000150681.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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7030 chr22 HAVANA transcript 20610447 20616201 . + . gene_id "ENSG00000216522.3"; transcript_id "ENST00000412874.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC011718.1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC011718.1-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150681.3"; havana_transcript "OTTHUMT00000319592.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7031 chr22 HAVANA exon 20610447 20610618 . + . gene_id "ENSG00000216522.3"; transcript_id "ENST00000412874.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC011718.1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC011718.1-001"; exon_number 1; exon_id "ENSE00001789785.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150681.3"; havana_transcript "OTTHUMT00000319592.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
7032 chr22 HAVANA exon 20611142 20611278 . + . gene_id "ENSG00000216522.3"; transcript_id "ENST00000412874.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC011718.1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC011718.1-001"; exon_number 2; exon_id "ENSE00001706674.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150681.3"; havana_transcript "OTTHUMT00000319592.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
7033 chr22 HAVANA exon 20614794 20614981 . + . gene_id "ENSG00000216522.3"; transcript_id "ENST00000412874.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC011718.1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC011718.1-001"; exon_number 3; exon_id "ENSE00001771936.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150681.3"; havana_transcript "OTTHUMT00000319592.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
7034 chr22 HAVANA exon 20615214 20615340 . + . gene_id "ENSG00000216522.3"; transcript_id "ENST00000412874.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC011718.1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC011718.1-001"; exon_number 4; exon_id "ENSE00001796287.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150681.3"; havana_transcript "OTTHUMT00000319592.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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7035 chr22 HAVANA exon 20615443 20615555 . + . gene_id "ENSG00000216522.3"; transcript_id "ENST00000412874.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC011718.1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC011718.1-001"; exon_number 5; exon_id "ENSE00001750227.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150681.3"; havana_transcript "OTTHUMT00000319592.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
7036 chr22 HAVANA exon 20615637 20615750 . + . gene_id "ENSG00000216522.3"; transcript_id "ENST00000412874.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC011718.1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC011718.1-001"; exon_number 6; exon_id "ENSE00001698263.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150681.3"; havana_transcript "OTTHUMT00000319592.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7037 chr22 HAVANA exon 20616055 20616201 . + . gene_id "ENSG00000216522.3"; transcript_id "ENST00000412874.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC011718.1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC011718.1-001"; exon_number 7; exon_id "ENSE00001635531.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150681.3"; havana_transcript "OTTHUMT00000319592.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7038 chr22 HAVANA gene 20632023 20661407 . - . gene_id "ENSG00000223579.2"; transcript_id "ENSG00000223579.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AC011718.2"; level 2; havana_gene "OTTHUMG00000150683.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7039 chr22 HAVANA transcript 20632023 20656899 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000577456.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000444810.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7040 chr22 HAVANA exon 20656688 20656899 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000577456.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-004"; exon_number 1; exon_id "ENSE00002732571.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000444810.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7041 chr22 HAVANA exon 20654282 20654340 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000577456.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-004"; exon_number 2; exon_id "ENSE00001794565.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000444810.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7042 chr22 HAVANA exon 20653789 20653813 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000577456.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-004"; exon_number 3; exon_id "ENSE00001767314.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000444810.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7043 chr22 HAVANA exon 20650758 20650844 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000577456.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-004"; exon_number 4; exon_id "ENSE00001753396.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000444810.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7044 chr22 HAVANA exon 20645786 20645851 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000577456.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-004"; exon_number 5; exon_id "ENSE00001703073.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000444810.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7045 chr22 HAVANA exon 20643724 20643785 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000577456.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-004"; exon_number 6; exon_id "ENSE00001720626.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000444810.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7046 chr22 HAVANA exon 20643225 20643258 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000577456.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-004"; exon_number 7; exon_id "ENSE00001709559.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000444810.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7047 chr22 HAVANA exon 20638693 20641015 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000577456.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-004"; exon_number 8; exon_id "ENSE00002708500.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000444810.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7048 chr22 HAVANA exon 20638087 20638159 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000577456.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-004"; exon_number 9; exon_id "ENSE00002690871.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000444810.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7049 chr22 HAVANA exon 20637820 20637860 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000577456.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-004"; exon_number 10; exon_id "ENSE00002717456.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000444810.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7050 chr22 HAVANA exon 20637203 20637357 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000577456.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-004"; exon_number 11; exon_id "ENSE00002728146.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000444810.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7051 chr22 HAVANA exon 20632023 20632559 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000577456.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-004"; exon_number 12; exon_id "ENSE00001633430.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000444810.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7052 chr22 HAVANA transcript 20632132 20656828 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000414550.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-003"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319604.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7053 chr22 HAVANA exon 20656688 20656828 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000414550.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-003"; exon_number 1; exon_id "ENSE00001655857.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319604.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7054 chr22 HAVANA exon 20654282 20654340 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000414550.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-003"; exon_number 2; exon_id "ENSE00001794565.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319604.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7055 chr22 HAVANA exon 20653789 20653813 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000414550.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-003"; exon_number 3; exon_id "ENSE00001767314.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319604.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7056 chr22 HAVANA exon 20650758 20650844 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000414550.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-003"; exon_number 4; exon_id "ENSE00001753396.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319604.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7057 chr22 HAVANA exon 20645786 20645851 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000414550.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-003"; exon_number 5; exon_id "ENSE00001703073.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319604.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7058 chr22 HAVANA exon 20643724 20643785 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000414550.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-003"; exon_number 6; exon_id "ENSE00001720626.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319604.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7059 chr22 HAVANA exon 20643225 20643258 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000414550.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-003"; exon_number 7; exon_id "ENSE00001709559.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319604.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7060 chr22 HAVANA exon 20637203 20638159 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000414550.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-003"; exon_number 8; exon_id "ENSE00001638227.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319604.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7061 chr22 HAVANA exon 20632132 20632559 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000414550.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-003"; exon_number 9; exon_id "ENSE00001658629.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319604.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7062 chr22 HAVANA transcript 20640889 20656782 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000428139.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-001"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319602.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7063 chr22 HAVANA exon 20656688 20656782 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000428139.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-001"; exon_number 1; exon_id "ENSE00001679057.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319602.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7064 chr22 HAVANA exon 20654282 20654340 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000428139.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-001"; exon_number 2; exon_id "ENSE00001794565.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319602.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7065 chr22 HAVANA exon 20653789 20653813 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000428139.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-001"; exon_number 3; exon_id "ENSE00001767314.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319602.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7066 chr22 HAVANA exon 20650758 20650844 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000428139.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-001"; exon_number 4; exon_id "ENSE00001753396.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319602.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7067 chr22 HAVANA exon 20645786 20645851 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000428139.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-001"; exon_number 5; exon_id "ENSE00001703073.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319602.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7068 chr22 HAVANA exon 20643724 20643785 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000428139.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-001"; exon_number 6; exon_id "ENSE00001720626.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319602.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7069 chr22 HAVANA exon 20643225 20643258 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000428139.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-001"; exon_number 7; exon_id "ENSE00001709559.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319602.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7070 chr22 HAVANA exon 20640889 20641015 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000428139.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-001"; exon_number 8; exon_id "ENSE00001729490.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319602.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7071 chr22 HAVANA transcript 20640968 20661407 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000412656.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-002"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319603.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7072 chr22 HAVANA exon 20661121 20661407 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000412656.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-002"; exon_number 1; exon_id "ENSE00001655413.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319603.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7073 chr22 HAVANA exon 20660211 20660269 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000412656.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-002"; exon_number 2; exon_id "ENSE00001702360.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319603.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7074 chr22 HAVANA exon 20654282 20654340 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000412656.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-002"; exon_number 3; exon_id "ENSE00001794565.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319603.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7075 chr22 HAVANA exon 20653789 20653813 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000412656.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-002"; exon_number 4; exon_id "ENSE00001767314.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319603.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7076 chr22 HAVANA exon 20650758 20650844 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000412656.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-002"; exon_number 5; exon_id "ENSE00001753396.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319603.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7077 chr22 HAVANA exon 20645786 20645851 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000412656.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-002"; exon_number 6; exon_id "ENSE00001703073.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319603.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7078 chr22 HAVANA exon 20643724 20643785 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000412656.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-002"; exon_number 7; exon_id "ENSE00001720626.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319603.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7079 chr22 HAVANA exon 20643225 20643258 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000412656.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-002"; exon_number 8; exon_id "ENSE00001709559.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319603.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7080 chr22 HAVANA exon 20640968 20641015 . - . gene_id "ENSG00000223579.2"; transcript_id "ENST00000412656.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.2-002"; exon_number 9; exon_id "ENSE00001593070.1"; level 2; havana_gene "OTTHUMG00000150683.2"; havana_transcript "OTTHUMT00000319603.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7081 chr22 HAVANA gene 20644408 20645991 . + . gene_id "ENSG00000227005.1"; transcript_id "ENSG00000227005.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.3"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AC011718.3"; level 2; havana_gene "OTTHUMG00000150684.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7082 chr22 HAVANA transcript 20644408 20645991 . + . gene_id "ENSG00000227005.1"; transcript_id "ENST00000413504.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.3-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150684.1"; havana_transcript "OTTHUMT00000319605.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7083 chr22 HAVANA exon 20644408 20644523 . + . gene_id "ENSG00000227005.1"; transcript_id "ENST00000413504.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.3-001"; exon_number 1; exon_id "ENSE00001681013.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150684.1"; havana_transcript "OTTHUMT00000319605.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7084 chr22 HAVANA exon 20645733 20645991 . + . gene_id "ENSG00000227005.1"; transcript_id "ENST00000413504.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AC011718.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC011718.3-001"; exon_number 2; exon_id "ENSE00001654289.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150684.1"; havana_transcript "OTTHUMT00000319605.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7085 chr22 HAVANA gene 20670709 20674508 . - . gene_id "ENSG00000233938.1"; transcript_id "ENSG00000233938.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PPP1R26P3"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "PPP1R26P3"; level 2; havana_gene "OTTHUMG00000151318.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7086 chr22 HAVANA transcript 20670709 20674508 . - . gene_id "ENSG00000233938.1"; transcript_id "ENST00000448709.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PPP1R26P3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PPP1R26P3-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151318.1"; havana_transcript "OTTHUMT00000322215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7087 chr22 HAVANA exon 20670709 20674508 . - . gene_id "ENSG00000233938.1"; transcript_id "ENST00000448709.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PPP1R26P3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PPP1R26P3-001"; exon_number 1; exon_id "ENSE00001615803.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151318.1"; havana_transcript "OTTHUMT00000322215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7088 chr22 HAVANA gene 20692438 20716938 . + . gene_id "ENSG00000188280.7"; transcript_id "ENSG00000188280.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A"; level 1; havana_gene "OTTHUMG00000150686.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7089 chr22 HAVANA transcript 20692438 20716938 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7090 chr22 HAVANA exon 20692438 20692649 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 1; exon_id "ENSE00001868890.2"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7091 chr22 HAVANA CDS 20692622 20692649 . + 0 gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 1; exon_id "ENSE00001868890.2"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7092 chr22 HAVANA start_codon 20692622 20692624 . + 0 gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 1; exon_id "ENSE00001868890.2"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7093 chr22 HAVANA exon 20695279 20695337 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 2; exon_id "ENSE00002273110.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7094 chr22 HAVANA CDS 20695279 20695337 . + 2 gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 2; exon_id "ENSE00002273110.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7095 chr22 HAVANA exon 20695806 20695830 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 3; exon_id "ENSE00002300933.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7096 chr22 HAVANA CDS 20695806 20695830 . + 0 gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 3; exon_id "ENSE00002300933.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7097 chr22 HAVANA exon 20698777 20698863 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 4; exon_id "ENSE00002313269.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7098 chr22 HAVANA CDS 20698777 20698863 . + 2 gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 4; exon_id "ENSE00002313269.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7099 chr22 HAVANA exon 20703776 20703841 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 5; exon_id "ENSE00002224205.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7100 chr22 HAVANA CDS 20703776 20703841 . + 2 gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 5; exon_id "ENSE00002224205.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7101 chr22 HAVANA exon 20705845 20705906 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 6; exon_id "ENSE00002230102.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7102 chr22 HAVANA CDS 20705845 20705906 . + 2 gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 6; exon_id "ENSE00002230102.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7103 chr22 HAVANA exon 20706372 20706405 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 7; exon_id "ENSE00002308258.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7104 chr22 HAVANA CDS 20706372 20706405 . + 0 gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 7; exon_id "ENSE00002308258.1"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7105 chr22 HAVANA exon 20708630 20716938 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 8; exon_id "ENSE00002265075.2"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7106 chr22 HAVANA CDS 20708630 20710983 . + 2 gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 8; exon_id "ENSE00002265075.2"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7107 chr22 HAVANA stop_codon 20710984 20710986 . + 0 gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; exon_number 8; exon_id "ENSE00002265075.2"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7108 chr22 HAVANA UTR 20692438 20692621 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7109 chr22 HAVANA UTR 20710984 20716938 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000434783.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM230A-001"; level 2; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000319609.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7110 chr22 HAVANA transcript 20703829 20706785 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000583722.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "FAM230A-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000444811.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7111 chr22 HAVANA exon 20703829 20703841 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000583722.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "FAM230A-002"; exon_number 1; exon_id "ENSE00001883961.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000444811.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7112 chr22 HAVANA CDS 20703829 20703841 . + 0 gene_id "ENSG00000188280.7"; transcript_id "ENST00000583722.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "FAM230A-002"; exon_number 1; exon_id "ENSE00001883961.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000444811.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7113 chr22 HAVANA exon 20705845 20705906 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000583722.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "FAM230A-002"; exon_number 2; exon_id "ENSE00002230102.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000444811.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7114 chr22 HAVANA CDS 20705845 20705906 . + 2 gene_id "ENSG00000188280.7"; transcript_id "ENST00000583722.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "FAM230A-002"; exon_number 2; exon_id "ENSE00002230102.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000444811.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7115 chr22 HAVANA exon 20706372 20706785 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000583722.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "FAM230A-002"; exon_number 3; exon_id "ENSE00002727656.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000444811.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7116 chr22 HAVANA CDS 20706372 20706542 . + 0 gene_id "ENSG00000188280.7"; transcript_id "ENST00000583722.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "FAM230A-002"; exon_number 3; exon_id "ENSE00002727656.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000444811.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7117 chr22 HAVANA stop_codon 20706543 20706545 . + 0 gene_id "ENSG00000188280.7"; transcript_id "ENST00000583722.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "FAM230A-002"; exon_number 3; exon_id "ENSE00002727656.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000444811.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7118 chr22 HAVANA UTR 20706543 20706785 . + . gene_id "ENSG00000188280.7"; transcript_id "ENST00000583722.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM230A"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "FAM230A-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150686.4"; havana_transcript "OTTHUMT00000444811.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7119 chr22 HAVANA gene 20704868 20745048 . - . gene_id "ENSG00000161133.12"; transcript_id "ENSG00000161133.12"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41"; level 2; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7120 chr22 HAVANA transcript 20704868 20726986 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000486536.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "USP41-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000319621.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7121 chr22 HAVANA exon 20726826 20726986 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000486536.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "USP41-003"; exon_number 1; exon_id "ENSE00001875609.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000319621.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7122 chr22 HAVANA exon 20724410 20724489 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000486536.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "USP41-003"; exon_number 2; exon_id "ENSE00003520026.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000319621.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7123 chr22 HAVANA exon 20723719 20723865 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000486536.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "USP41-003"; exon_number 3; exon_id "ENSE00003555706.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000319621.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7124 chr22 HAVANA exon 20721838 20721933 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000486536.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "USP41-003"; exon_number 4; exon_id "ENSE00003522484.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000319621.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7125 chr22 HAVANA exon 20720857 20721024 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000486536.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "USP41-003"; exon_number 5; exon_id "ENSE00003629508.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000319621.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7126 chr22 HAVANA exon 20718476 20718607 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000486536.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "USP41-003"; exon_number 6; exon_id "ENSE00003657294.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000319621.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7127 chr22 HAVANA exon 20717915 20717964 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000486536.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "USP41-003"; exon_number 7; exon_id "ENSE00003522421.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000319621.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7128 chr22 HAVANA exon 20704868 20705221 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000486536.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "USP41-003"; exon_number 8; exon_id "ENSE00001854894.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000319621.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7129 chr22 ENSEMBL transcript 20704868 20745048 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7130 chr22 ENSEMBL exon 20745029 20745048 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 1; exon_id "ENSE00001650984.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7131 chr22 ENSEMBL CDS 20745029 20745048 . - 0 gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 1; exon_id "ENSE00001650984.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7132 chr22 ENSEMBL start_codon 20745046 20745048 . - 0 gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 1; exon_id "ENSE00001650984.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7133 chr22 ENSEMBL exon 20744786 20744860 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 2; exon_id "ENSE00001781298.2"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7134 chr22 ENSEMBL CDS 20744786 20744860 . - 1 gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 2; exon_id "ENSE00001781298.2"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7135 chr22 ENSEMBL exon 20739003 20739029 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 3; exon_id "ENSE00002239843.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7136 chr22 ENSEMBL CDS 20739003 20739029 . - 1 gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 3; exon_id "ENSE00002239843.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7137 chr22 ENSEMBL exon 20731588 20731620 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 4; exon_id "ENSE00002212811.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7138 chr22 ENSEMBL CDS 20731588 20731620 . - 1 gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 4; exon_id "ENSE00002212811.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7139 chr22 ENSEMBL exon 20731445 20731543 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 5; exon_id "ENSE00002311468.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7140 chr22 ENSEMBL CDS 20731445 20731543 . - 1 gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 5; exon_id "ENSE00002311468.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7141 chr22 ENSEMBL exon 20729780 20729925 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 6; exon_id "ENSE00001138503.3"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7142 chr22 ENSEMBL CDS 20729780 20729925 . - 1 gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 6; exon_id "ENSE00001138503.3"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7143 chr22 ENSEMBL exon 20724410 20724489 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 7; exon_id "ENSE00003664533.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7144 chr22 ENSEMBL CDS 20724410 20724489 . - 2 gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 7; exon_id "ENSE00003664533.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7145 chr22 ENSEMBL exon 20723719 20723865 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 8; exon_id "ENSE00003543382.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7146 chr22 ENSEMBL CDS 20723719 20723865 . - 0 gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 8; exon_id "ENSE00003543382.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7147 chr22 ENSEMBL exon 20721838 20721933 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 9; exon_id "ENSE00003636817.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7148 chr22 ENSEMBL CDS 20721838 20721933 . - 0 gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 9; exon_id "ENSE00003636817.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7149 chr22 ENSEMBL exon 20720857 20721024 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 10; exon_id "ENSE00003518624.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7150 chr22 ENSEMBL CDS 20720857 20721024 . - 0 gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 10; exon_id "ENSE00003518624.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7151 chr22 ENSEMBL exon 20718476 20718607 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 11; exon_id "ENSE00003692960.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7152 chr22 ENSEMBL CDS 20718476 20718607 . - 0 gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 11; exon_id "ENSE00003692960.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7153 chr22 ENSEMBL exon 20717915 20717964 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 12; exon_id "ENSE00003570175.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7154 chr22 ENSEMBL CDS 20717917 20717964 . - 0 gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 12; exon_id "ENSE00003570175.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7155 chr22 ENSEMBL exon 20704868 20705221 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; exon_number 13; exon_id "ENSE00001854894.1"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7156 chr22 ENSEMBL UTR 20717915 20717916 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7157 chr22 ENSEMBL UTR 20704868 20705221 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000454608.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP41-201"; level 3; tag "basic"; tag "appris_candidate_longest"; havana_gene "OTTHUMG00000151317.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7158 chr22 HAVANA transcript 20717911 20731541 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7159 chr22 HAVANA exon 20731445 20731541 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 1; exon_id "ENSE00001712284.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7160 chr22 HAVANA CDS 20731445 20731541 . - 2 gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 1; exon_id "ENSE00001712284.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7161 chr22 HAVANA exon 20729780 20729925 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 2; exon_id "ENSE00001138503.3"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7162 chr22 HAVANA CDS 20729780 20729925 . - 1 gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 2; exon_id "ENSE00001138503.3"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7163 chr22 HAVANA exon 20724410 20724489 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 3; exon_id "ENSE00003664533.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7164 chr22 HAVANA CDS 20724410 20724489 . - 2 gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 3; exon_id "ENSE00003664533.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7165 chr22 HAVANA exon 20723719 20723865 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 4; exon_id "ENSE00003543382.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7166 chr22 HAVANA CDS 20723719 20723865 . - 0 gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 4; exon_id "ENSE00003543382.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7167 chr22 HAVANA exon 20721838 20721933 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 5; exon_id "ENSE00003636817.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7168 chr22 HAVANA CDS 20721838 20721933 . - 0 gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 5; exon_id "ENSE00003636817.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7169 chr22 HAVANA exon 20720857 20721024 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 6; exon_id "ENSE00003518624.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7170 chr22 HAVANA CDS 20720857 20721024 . - 0 gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 6; exon_id "ENSE00003518624.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7171 chr22 HAVANA exon 20718476 20718607 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 7; exon_id "ENSE00003692960.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7172 chr22 HAVANA CDS 20718476 20718607 . - 0 gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 7; exon_id "ENSE00003692960.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7173 chr22 HAVANA exon 20717911 20717964 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 8; exon_id "ENSE00001316835.3"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7174 chr22 HAVANA CDS 20717914 20717964 . - 0 gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 8; exon_id "ENSE00001316835.3"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7175 chr22 HAVANA stop_codon 20717911 20717913 . - 0 gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; exon_number 8; exon_id "ENSE00001316835.3"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7176 chr22 HAVANA UTR 20717911 20717913 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000292729.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP41-001"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "appris_candidate"; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000075837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7177 chr22 HAVANA transcript 20717915 20718607 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000470202.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "USP41-002"; level 2; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000322200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7178 chr22 HAVANA exon 20718476 20718607 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000470202.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "USP41-002"; exon_number 1; exon_id "ENSE00003657294.1"; level 2; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000322200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7179 chr22 HAVANA exon 20717915 20717964 . - . gene_id "ENSG00000161133.12"; transcript_id "ENST00000470202.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP41"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "USP41-002"; exon_number 2; exon_id "ENSE00003522421.1"; level 2; havana_gene "OTTHUMG00000151317.4"; havana_transcript "OTTHUMT00000322200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7180 chr22 HAVANA gene 20748405 20762745 . + . gene_id "ENSG00000185252.13"; transcript_id "ENSG00000185252.13"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74"; level 1; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7181 chr22 HAVANA transcript 20748405 20761968 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7182 chr22 HAVANA exon 20748405 20748952 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; exon_number 1; exon_id "ENSE00001879391.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7183 chr22 HAVANA CDS 20748919 20748952 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; exon_number 1; exon_id "ENSE00001879391.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7184 chr22 HAVANA start_codon 20748919 20748921 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; exon_number 1; exon_id "ENSE00001879391.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7185 chr22 HAVANA exon 20749623 20749708 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; exon_number 2; exon_id "ENSE00003587165.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7186 chr22 HAVANA CDS 20749623 20749708 . + 2 gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; exon_number 2; exon_id "ENSE00003587165.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7187 chr22 HAVANA exon 20754922 20755048 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; exon_number 3; exon_id "ENSE00003593522.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7188 chr22 HAVANA CDS 20754922 20755048 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; exon_number 3; exon_id "ENSE00003593522.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7189 chr22 HAVANA exon 20755567 20755662 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; exon_number 4; exon_id "ENSE00003514535.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7190 chr22 HAVANA CDS 20755567 20755662 . + 2 gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; exon_number 4; exon_id "ENSE00003514535.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7191 chr22 HAVANA exon 20759667 20761968 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; exon_number 5; exon_id "ENSE00001900871.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7192 chr22 HAVANA CDS 20759667 20761255 . + 2 gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; exon_number 5; exon_id "ENSE00001900871.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7193 chr22 HAVANA stop_codon 20761256 20761258 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; exon_number 5; exon_id "ENSE00001900871.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7194 chr22 HAVANA UTR 20748405 20748918 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7195 chr22 HAVANA UTR 20761256 20761968 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000400451.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-005"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319648.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7196 chr22 HAVANA transcript 20748418 20761697 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000403682.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-002"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS58794.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319645.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7197 chr22 HAVANA exon 20748418 20748952 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000403682.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-002"; exon_number 1; exon_id "ENSE00001860187.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS58794.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319645.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7198 chr22 HAVANA CDS 20748919 20748952 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000403682.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-002"; exon_number 1; exon_id "ENSE00001860187.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS58794.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319645.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7199 chr22 HAVANA start_codon 20748919 20748921 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000403682.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-002"; exon_number 1; exon_id "ENSE00001860187.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS58794.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319645.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7200 chr22 HAVANA exon 20754922 20755048 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000403682.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-002"; exon_number 2; exon_id "ENSE00003501925.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS58794.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319645.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7201 chr22 HAVANA CDS 20754922 20755048 . + 2 gene_id "ENSG00000185252.13"; transcript_id "ENST00000403682.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-002"; exon_number 2; exon_id "ENSE00003501925.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS58794.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319645.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7202 chr22 HAVANA exon 20755567 20755662 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000403682.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-002"; exon_number 3; exon_id "ENSE00003460265.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS58794.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319645.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7203 chr22 HAVANA CDS 20755567 20755662 . + 1 gene_id "ENSG00000185252.13"; transcript_id "ENST00000403682.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-002"; exon_number 3; exon_id "ENSE00003460265.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS58794.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319645.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7204 chr22 HAVANA exon 20759667 20761697 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000403682.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-002"; exon_number 4; exon_id "ENSE00001879684.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS58794.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319645.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7205 chr22 HAVANA CDS 20759667 20759943 . + 1 gene_id "ENSG00000185252.13"; transcript_id "ENST00000403682.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-002"; exon_number 4; exon_id "ENSE00001879684.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS58794.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319645.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7206 chr22 HAVANA stop_codon 20759944 20759946 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000403682.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-002"; exon_number 4; exon_id "ENSE00001879684.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS58794.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319645.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7207 chr22 HAVANA UTR 20748418 20748918 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000403682.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-002"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS58794.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319645.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7208 chr22 HAVANA UTR 20759944 20761697 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000403682.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-002"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS58794.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319645.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7209 chr22 HAVANA transcript 20748451 20761971 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7210 chr22 HAVANA exon 20748451 20748624 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; exon_number 1; exon_id "ENSE00001771892.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7211 chr22 HAVANA CDS 20748575 20748624 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; exon_number 1; exon_id "ENSE00001771892.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7212 chr22 HAVANA start_codon 20748575 20748577 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; exon_number 1; exon_id "ENSE00001771892.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7213 chr22 HAVANA exon 20749623 20749708 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; exon_number 2; exon_id "ENSE00003604580.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7214 chr22 HAVANA CDS 20749623 20749708 . + 1 gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; exon_number 2; exon_id "ENSE00003604580.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7215 chr22 HAVANA exon 20754922 20755048 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; exon_number 3; exon_id "ENSE00003501925.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7216 chr22 HAVANA CDS 20754922 20755048 . + 2 gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; exon_number 3; exon_id "ENSE00003501925.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7217 chr22 HAVANA exon 20755567 20755662 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; exon_number 4; exon_id "ENSE00003460265.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7218 chr22 HAVANA CDS 20755567 20755662 . + 1 gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; exon_number 4; exon_id "ENSE00003460265.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7219 chr22 HAVANA exon 20759667 20761971 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; exon_number 5; exon_id "ENSE00001602805.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7220 chr22 HAVANA CDS 20759667 20759943 . + 1 gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; exon_number 5; exon_id "ENSE00001602805.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7221 chr22 HAVANA stop_codon 20759944 20759946 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; exon_number 5; exon_id "ENSE00001602805.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7222 chr22 HAVANA UTR 20748451 20748574 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7223 chr22 HAVANA UTR 20759944 20761971 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000357502.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ZNF74-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319622.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7224 chr22 HAVANA transcript 20748478 20761970 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000493734.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZNF74-003"; level 2; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319646.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7225 chr22 HAVANA exon 20748478 20749708 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000493734.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZNF74-003"; exon_number 1; exon_id "ENSE00001830415.1"; level 2; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319646.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7226 chr22 HAVANA exon 20754922 20755048 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000493734.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZNF74-003"; exon_number 2; exon_id "ENSE00003485405.1"; level 2; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319646.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7227 chr22 HAVANA exon 20755567 20755662 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000493734.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZNF74-003"; exon_number 3; exon_id "ENSE00003628290.1"; level 2; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319646.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7228 chr22 HAVANA exon 20759667 20761970 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000493734.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZNF74-003"; exon_number 4; exon_id "ENSE00001842901.1"; level 2; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319646.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7229 chr22 HAVANA transcript 20748479 20759783 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000420626.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-007"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7230 chr22 HAVANA exon 20748479 20748952 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000420626.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-007"; exon_number 1; exon_id "ENSE00001561842.2"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7231 chr22 HAVANA CDS 20748919 20748952 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000420626.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-007"; exon_number 1; exon_id "ENSE00001561842.2"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7232 chr22 HAVANA start_codon 20748919 20748921 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000420626.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-007"; exon_number 1; exon_id "ENSE00001561842.2"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7233 chr22 HAVANA exon 20759667 20759783 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000420626.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-007"; exon_number 2; exon_id "ENSE00001622393.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7234 chr22 HAVANA CDS 20759667 20759783 . + 2 gene_id "ENSG00000185252.13"; transcript_id "ENST00000420626.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-007"; exon_number 2; exon_id "ENSE00001622393.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7235 chr22 HAVANA UTR 20748479 20748918 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000420626.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF74-007"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7236 chr22 ENSEMBL transcript 20748479 20761614 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7237 chr22 ENSEMBL exon 20748479 20748624 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; exon_number 1; exon_id "ENSE00001399333.3"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7238 chr22 ENSEMBL exon 20748853 20748952 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; exon_number 2; exon_id "ENSE00002214357.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7239 chr22 ENSEMBL CDS 20748919 20748952 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; exon_number 2; exon_id "ENSE00002214357.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7240 chr22 ENSEMBL start_codon 20748919 20748921 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; exon_number 2; exon_id "ENSE00002214357.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7241 chr22 ENSEMBL exon 20749623 20749708 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; exon_number 3; exon_id "ENSE00003587165.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7242 chr22 ENSEMBL CDS 20749623 20749708 . + 2 gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; exon_number 3; exon_id "ENSE00003587165.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7243 chr22 ENSEMBL exon 20754922 20755048 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; exon_number 4; exon_id "ENSE00003593522.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7244 chr22 ENSEMBL CDS 20754922 20755048 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; exon_number 4; exon_id "ENSE00003593522.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7245 chr22 ENSEMBL exon 20755567 20755662 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; exon_number 5; exon_id "ENSE00003514535.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7246 chr22 ENSEMBL CDS 20755567 20755662 . + 2 gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; exon_number 5; exon_id "ENSE00003514535.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7247 chr22 ENSEMBL exon 20759667 20761614 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; exon_number 6; exon_id "ENSE00001658898.2"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7248 chr22 ENSEMBL CDS 20759667 20761255 . + 2 gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; exon_number 6; exon_id "ENSE00001658898.2"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7249 chr22 ENSEMBL stop_codon 20761256 20761258 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; exon_number 6; exon_id "ENSE00001658898.2"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7250 chr22 ENSEMBL UTR 20748479 20748624 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7251 chr22 ENSEMBL UTR 20748853 20748918 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7252 chr22 ENSEMBL UTR 20761256 20761614 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000356671.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7253 chr22 HAVANA transcript 20748693 20762745 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7254 chr22 HAVANA exon 20748693 20748952 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; exon_number 1; exon_id "ENSE00001704027.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7255 chr22 HAVANA CDS 20748919 20748952 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; exon_number 1; exon_id "ENSE00001704027.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7256 chr22 HAVANA start_codon 20748919 20748921 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; exon_number 1; exon_id "ENSE00001704027.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7257 chr22 HAVANA exon 20749623 20749708 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; exon_number 2; exon_id "ENSE00003587165.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7258 chr22 HAVANA CDS 20749623 20749708 . + 2 gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; exon_number 2; exon_id "ENSE00003587165.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7259 chr22 HAVANA exon 20753885 20753980 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; exon_number 3; exon_id "ENSE00001441292.2"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7260 chr22 HAVANA CDS 20753885 20753971 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; exon_number 3; exon_id "ENSE00001441292.2"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7261 chr22 HAVANA stop_codon 20753972 20753974 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; exon_number 3; exon_id "ENSE00001441292.2"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7262 chr22 HAVANA exon 20754922 20755048 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; exon_number 4; exon_id "ENSE00003485405.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7263 chr22 HAVANA exon 20755567 20755662 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; exon_number 5; exon_id "ENSE00003628290.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7264 chr22 HAVANA exon 20759667 20762745 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; exon_number 6; exon_id "ENSE00001664243.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7265 chr22 HAVANA UTR 20748693 20748918 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7266 chr22 HAVANA UTR 20753972 20753980 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7267 chr22 HAVANA UTR 20754922 20755048 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7268 chr22 HAVANA UTR 20755567 20755662 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7269 chr22 HAVANA UTR 20759667 20762745 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000437275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ZNF74-004"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319647.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7270 chr22 HAVANA transcript 20748919 20761258 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000405993.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-008"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000322214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7271 chr22 HAVANA exon 20748919 20748952 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000405993.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-008"; exon_number 1; exon_id "ENSE00001547837.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000322214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7272 chr22 HAVANA CDS 20748919 20748952 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000405993.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-008"; exon_number 1; exon_id "ENSE00001547837.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000322214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7273 chr22 HAVANA start_codon 20748919 20748921 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000405993.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-008"; exon_number 1; exon_id "ENSE00001547837.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000322214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7274 chr22 HAVANA exon 20749623 20749708 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000405993.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-008"; exon_number 2; exon_id "ENSE00003587165.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000322214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7275 chr22 HAVANA CDS 20749623 20749708 . + 2 gene_id "ENSG00000185252.13"; transcript_id "ENST00000405993.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-008"; exon_number 2; exon_id "ENSE00003587165.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000322214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7276 chr22 HAVANA exon 20754922 20755048 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000405993.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-008"; exon_number 3; exon_id "ENSE00003593522.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000322214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7277 chr22 HAVANA CDS 20754922 20755048 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000405993.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-008"; exon_number 3; exon_id "ENSE00003593522.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000322214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7278 chr22 HAVANA exon 20759667 20761258 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000405993.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-008"; exon_number 4; exon_id "ENSE00001302112.4"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000322214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7279 chr22 HAVANA CDS 20759667 20761255 . + 2 gene_id "ENSG00000185252.13"; transcript_id "ENST00000405993.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-008"; exon_number 4; exon_id "ENSE00001302112.4"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000322214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7280 chr22 HAVANA stop_codon 20761256 20761258 . + 0 gene_id "ENSG00000185252.13"; transcript_id "ENST00000405993.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-008"; exon_number 4; exon_id "ENSE00001302112.4"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000322214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7281 chr22 HAVANA UTR 20761256 20761258 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000405993.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF74-008"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42982.1"; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000322214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7282 chr22 HAVANA transcript 20753801 20761683 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000476678.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZNF74-006"; level 2; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7283 chr22 HAVANA exon 20753801 20755662 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000476678.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZNF74-006"; exon_number 1; exon_id "ENSE00001921224.1"; level 2; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7284 chr22 HAVANA exon 20759667 20761683 . + . gene_id "ENSG00000185252.13"; transcript_id "ENST00000476678.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF74"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ZNF74-006"; exon_number 2; exon_id "ENSE00001942133.1"; level 2; havana_gene "OTTHUMG00000150687.3"; havana_transcript "OTTHUMT00000319649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7285 chr22 ENSEMBL gene 20771087 20771189 . - . gene_id "ENSG00000207343.1"; transcript_id "ENSG00000207343.1"; gene_type "snRNA"; gene_status "KNOWN"; gene_name "RNU6-225P"; transcript_type "snRNA"; transcript_status "KNOWN"; transcript_name "RNU6-225P"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7286 chr22 ENSEMBL transcript 20771087 20771189 . - . gene_id "ENSG00000207343.1"; transcript_id "ENST00000384613.1"; gene_type "snRNA"; gene_status "KNOWN"; gene_name "RNU6-225P"; transcript_type "snRNA"; transcript_status "KNOWN"; transcript_name "RNU6-225P-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7287 chr22 ENSEMBL exon 20771087 20771189 . - . gene_id "ENSG00000207343.1"; transcript_id "ENST00000384613.1"; gene_type "snRNA"; gene_status "KNOWN"; gene_name "RNU6-225P"; transcript_type "snRNA"; transcript_status "KNOWN"; transcript_name "RNU6-225P-201"; exon_number 1; exon_id "ENSE00001808026.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7288 chr22 HAVANA gene 20778874 20792146 . - . gene_id "ENSG00000244486.3"; transcript_id "ENSG00000244486.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2"; level 2; havana_gene "OTTHUMG00000150779.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7289 chr22 HAVANA transcript 20778874 20792112 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7290 chr22 HAVANA exon 20791869 20792112 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 1; exon_id "ENSE00001923681.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7291 chr22 HAVANA CDS 20791869 20792041 . - 0 gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 1; exon_id "ENSE00001923681.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7292 chr22 HAVANA start_codon 20792039 20792041 . - 0 gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 1; exon_id "ENSE00001923681.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7293 chr22 HAVANA exon 20786217 20786275 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 2; exon_id "ENSE00001238538.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7294 chr22 HAVANA CDS 20786217 20786275 . - 1 gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 2; exon_id "ENSE00001238538.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7295 chr22 HAVANA exon 20786032 20786133 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 3; exon_id "ENSE00001238523.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7296 chr22 HAVANA CDS 20786032 20786133 . - 2 gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 3; exon_id "ENSE00001238523.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7297 chr22 HAVANA exon 20785305 20785824 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 4; exon_id "ENSE00001238507.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7298 chr22 HAVANA CDS 20785305 20785824 . - 2 gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 4; exon_id "ENSE00001238507.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7299 chr22 HAVANA exon 20784977 20785195 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 5; exon_id "ENSE00000935853.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7300 chr22 HAVANA CDS 20784977 20785195 . - 1 gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 5; exon_id "ENSE00000935853.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7301 chr22 HAVANA exon 20784716 20784844 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 6; exon_id "ENSE00003675495.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7302 chr22 HAVANA CDS 20784716 20784844 . - 1 gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 6; exon_id "ENSE00003675495.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7303 chr22 HAVANA exon 20784017 20784120 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 7; exon_id "ENSE00003692264.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7304 chr22 HAVANA CDS 20784017 20784120 . - 1 gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 7; exon_id "ENSE00003692264.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7305 chr22 HAVANA exon 20783823 20783940 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 8; exon_id "ENSE00003485985.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7306 chr22 HAVANA CDS 20783823 20783940 . - 2 gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 8; exon_id "ENSE00003485985.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7307 chr22 HAVANA exon 20783512 20783627 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 9; exon_id "ENSE00003492059.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7308 chr22 HAVANA CDS 20783512 20783627 . - 1 gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 9; exon_id "ENSE00003492059.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7309 chr22 HAVANA exon 20781685 20781837 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 10; exon_id "ENSE00003539292.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7310 chr22 HAVANA CDS 20781685 20781837 . - 2 gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 10; exon_id "ENSE00003539292.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7311 chr22 HAVANA exon 20778874 20780569 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 11; exon_id "ENSE00001238415.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7312 chr22 HAVANA CDS 20779668 20780569 . - 2 gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 11; exon_id "ENSE00001238415.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7313 chr22 HAVANA stop_codon 20779665 20779667 . - 0 gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; exon_number 11; exon_id "ENSE00001238415.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7314 chr22 HAVANA UTR 20792042 20792112 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7315 chr22 HAVANA UTR 20778874 20779667 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000405555.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCARF2-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46666.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7316 chr22 HAVANA transcript 20779105 20792146 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7317 chr22 HAVANA exon 20791869 20792146 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 1; exon_id "ENSE00001313902.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7318 chr22 HAVANA CDS 20791869 20792041 . - 0 gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 1; exon_id "ENSE00001313902.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7319 chr22 HAVANA start_codon 20792039 20792041 . - 0 gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 1; exon_id "ENSE00001313902.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7320 chr22 HAVANA exon 20786217 20786275 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 2; exon_id "ENSE00001238538.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7321 chr22 HAVANA CDS 20786217 20786275 . - 1 gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 2; exon_id "ENSE00001238538.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7322 chr22 HAVANA exon 20786032 20786133 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 3; exon_id "ENSE00001238523.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7323 chr22 HAVANA CDS 20786032 20786133 . - 2 gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 3; exon_id "ENSE00001238523.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7324 chr22 HAVANA exon 20785305 20785824 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 4; exon_id "ENSE00001238507.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7325 chr22 HAVANA CDS 20785305 20785824 . - 2 gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 4; exon_id "ENSE00001238507.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7326 chr22 HAVANA exon 20784977 20785195 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 5; exon_id "ENSE00000935853.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7327 chr22 HAVANA CDS 20784977 20785195 . - 1 gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 5; exon_id "ENSE00000935853.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7328 chr22 HAVANA exon 20784716 20784844 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 6; exon_id "ENSE00003675495.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7329 chr22 HAVANA CDS 20784716 20784844 . - 1 gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 6; exon_id "ENSE00003675495.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7330 chr22 HAVANA exon 20784017 20784120 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 7; exon_id "ENSE00003692264.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7331 chr22 HAVANA CDS 20784017 20784120 . - 1 gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 7; exon_id "ENSE00003692264.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7332 chr22 HAVANA exon 20783823 20783940 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 8; exon_id "ENSE00003485985.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7333 chr22 HAVANA CDS 20783823 20783940 . - 2 gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 8; exon_id "ENSE00003485985.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7334 chr22 HAVANA exon 20783512 20783642 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 9; exon_id "ENSE00001384957.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7335 chr22 HAVANA CDS 20783512 20783642 . - 1 gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 9; exon_id "ENSE00001384957.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7336 chr22 HAVANA exon 20781685 20781837 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 10; exon_id "ENSE00003539292.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7337 chr22 HAVANA CDS 20781685 20781837 . - 2 gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 10; exon_id "ENSE00003539292.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7338 chr22 HAVANA exon 20779105 20780569 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 11; exon_id "ENSE00001846478.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7339 chr22 HAVANA CDS 20779668 20780569 . - 2 gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 11; exon_id "ENSE00001846478.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
7340 chr22 HAVANA stop_codon 20779665 20779667 . - 0 gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; exon_number 11; exon_id "ENSE00001846478.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7341 chr22 HAVANA UTR 20792042 20792146 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7342 chr22 HAVANA UTR 20779105 20779667 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000266214.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SCARF2-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13779.1"; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7343 chr22 HAVANA transcript 20780374 20784213 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000494535.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SCARF2-003"; level 2; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7344 chr22 HAVANA exon 20784017 20784213 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000494535.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SCARF2-003"; exon_number 1; exon_id "ENSE00001821482.1"; level 2; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7345 chr22 HAVANA exon 20783823 20783940 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000494535.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SCARF2-003"; exon_number 2; exon_id "ENSE00003458644.1"; level 2; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7346 chr22 HAVANA exon 20783512 20783627 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000494535.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SCARF2-003"; exon_number 3; exon_id "ENSE00003639995.1"; level 2; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7347 chr22 HAVANA exon 20781685 20781837 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000494535.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SCARF2-003"; exon_number 4; exon_id "ENSE00003681339.1"; level 2; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7348 chr22 HAVANA exon 20780374 20780569 . - . gene_id "ENSG00000244486.3"; transcript_id "ENST00000494535.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCARF2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SCARF2-003"; exon_number 5; exon_id "ENSE00001833827.1"; level 2; havana_gene "OTTHUMG00000150779.2"; havana_transcript "OTTHUMT00000320049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7349 chr22 HAVANA gene 20783528 20850170 . - . gene_id "ENSG00000099910.12"; transcript_id "ENSG00000099910.12"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22"; level 1; tag "ncRNA_host"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7350 chr22 HAVANA transcript 20783528 20800907 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000429594.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "KLHL22-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7351 chr22 HAVANA exon 20800730 20800907 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000429594.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "KLHL22-002"; exon_number 1; exon_id "ENSE00001739372.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7352 chr22 HAVANA CDS 20800730 20800907 . - 1 gene_id "ENSG00000099910.12"; transcript_id "ENST00000429594.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "KLHL22-002"; exon_number 1; exon_id "ENSE00001739372.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7353 chr22 HAVANA exon 20784716 20784844 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000429594.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "KLHL22-002"; exon_number 2; exon_id "ENSE00003692841.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7354 chr22 HAVANA CDS 20784830 20784844 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000429594.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "KLHL22-002"; exon_number 2; exon_id "ENSE00003692841.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7355 chr22 HAVANA stop_codon 20784827 20784829 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000429594.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "KLHL22-002"; exon_number 2; exon_id "ENSE00003692841.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7356 chr22 HAVANA exon 20784017 20784120 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000429594.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "KLHL22-002"; exon_number 3; exon_id "ENSE00003602171.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7357 chr22 HAVANA exon 20783823 20783940 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000429594.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "KLHL22-002"; exon_number 4; exon_id "ENSE00003486019.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7358 chr22 HAVANA exon 20783528 20783642 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000429594.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "KLHL22-002"; exon_number 5; exon_id "ENSE00001680258.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7359 chr22 HAVANA UTR 20784716 20784829 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000429594.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "KLHL22-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7360 chr22 HAVANA UTR 20784017 20784120 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000429594.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "KLHL22-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7361 chr22 HAVANA UTR 20783823 20783940 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000429594.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "KLHL22-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7362 chr22 HAVANA UTR 20783528 20783642 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000429594.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "KLHL22-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7363 chr22 HAVANA transcript 20795806 20850170 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7364 chr22 HAVANA exon 20850047 20850170 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 1; exon_id "ENSE00001856809.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7365 chr22 HAVANA exon 20843272 20843531 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 2; exon_id "ENSE00003616753.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7366 chr22 HAVANA CDS 20843272 20843498 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 2; exon_id "ENSE00003616753.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7367 chr22 HAVANA start_codon 20843496 20843498 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 2; exon_id "ENSE00003616753.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
7368 chr22 HAVANA exon 20825637 20825802 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 3; exon_id "ENSE00003469926.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7369 chr22 HAVANA CDS 20825637 20825802 . - 1 gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 3; exon_id "ENSE00003469926.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
7370 chr22 HAVANA exon 20819145 20819863 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 4; exon_id "ENSE00003565502.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7371 chr22 HAVANA CDS 20819145 20819863 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 4; exon_id "ENSE00003565502.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7372 chr22 HAVANA exon 20812095 20812287 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 5; exon_id "ENSE00003667948.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7373 chr22 HAVANA CDS 20812095 20812287 . - 1 gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 5; exon_id "ENSE00003667948.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
7374 chr22 HAVANA exon 20800730 20800963 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 6; exon_id "ENSE00001138240.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
7375 chr22 HAVANA CDS 20800730 20800963 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 6; exon_id "ENSE00001138240.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7376 chr22 HAVANA exon 20795806 20796725 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 7; exon_id "ENSE00001293721.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7377 chr22 HAVANA CDS 20796363 20796725 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 7; exon_id "ENSE00001293721.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7378 chr22 HAVANA stop_codon 20796360 20796362 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; exon_number 7; exon_id "ENSE00001293721.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7379 chr22 HAVANA UTR 20850047 20850170 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7380 chr22 HAVANA UTR 20843499 20843531 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7381 chr22 HAVANA UTR 20795806 20796362 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000328879.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13780.1"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320045.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7382 chr22 ENSEMBL transcript 20795948 20850082 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7383 chr22 ENSEMBL exon 20850047 20850082 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; exon_number 1; exon_id "ENSE00001731680.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7384 chr22 ENSEMBL exon 20843272 20843531 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; exon_number 2; exon_id "ENSE00003554240.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7385 chr22 ENSEMBL exon 20819145 20819863 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; exon_number 3; exon_id "ENSE00003474695.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7386 chr22 ENSEMBL CDS 20819145 20819827 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; exon_number 3; exon_id "ENSE00003474695.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7387 chr22 ENSEMBL start_codon 20819825 20819827 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; exon_number 3; exon_id "ENSE00003474695.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7388 chr22 ENSEMBL exon 20812095 20812287 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; exon_number 4; exon_id "ENSE00003667948.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7389 chr22 ENSEMBL CDS 20812095 20812287 . - 1 gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; exon_number 4; exon_id "ENSE00003667948.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7390 chr22 ENSEMBL exon 20800730 20800963 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; exon_number 5; exon_id "ENSE00001138240.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7391 chr22 ENSEMBL CDS 20800730 20800963 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; exon_number 5; exon_id "ENSE00001138240.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7392 chr22 ENSEMBL exon 20795948 20796725 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; exon_number 6; exon_id "ENSE00001691842.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7393 chr22 ENSEMBL CDS 20796363 20796725 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; exon_number 6; exon_id "ENSE00001691842.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7394 chr22 ENSEMBL stop_codon 20796360 20796362 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; exon_number 6; exon_id "ENSE00001691842.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7395 chr22 ENSEMBL UTR 20850047 20850082 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7396 chr22 ENSEMBL UTR 20843272 20843531 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7397 chr22 ENSEMBL UTR 20819828 20819863 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7398 chr22 ENSEMBL UTR 20795948 20796362 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000440659.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150778.43";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7399 chr22 HAVANA transcript 20810505 20819773 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000487090.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-013"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320135.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7400 chr22 HAVANA exon 20819621 20819773 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000487090.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-013"; exon_number 1; exon_id "ENSE00001902415.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320135.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7401 chr22 HAVANA exon 20812095 20812287 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000487090.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-013"; exon_number 2; exon_id "ENSE00003462119.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320135.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7402 chr22 HAVANA exon 20810505 20810754 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000487090.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-013"; exon_number 3; exon_id "ENSE00001907891.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320135.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7403 chr22 HAVANA transcript 20812077 20850079 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000479601.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "KLHL22-004"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320126.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7404 chr22 HAVANA exon 20850047 20850079 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000479601.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "KLHL22-004"; exon_number 1; exon_id "ENSE00001938309.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320126.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7405 chr22 HAVANA exon 20843272 20843531 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000479601.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "KLHL22-004"; exon_number 2; exon_id "ENSE00003554240.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320126.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7406 chr22 HAVANA exon 20825637 20825802 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000479601.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "KLHL22-004"; exon_number 3; exon_id "ENSE00003547260.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320126.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7407 chr22 HAVANA exon 20819145 20819863 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000479601.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "KLHL22-004"; exon_number 4; exon_id "ENSE00003493912.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320126.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7408 chr22 HAVANA exon 20812077 20812287 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000479601.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "KLHL22-004"; exon_number 5; exon_id "ENSE00001945015.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320126.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7409 chr22 HAVANA transcript 20819349 20850089 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000451553.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7410 chr22 HAVANA exon 20850047 20850089 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000451553.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-007"; exon_number 1; exon_id "ENSE00001787907.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7411 chr22 HAVANA exon 20825637 20825802 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000451553.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-007"; exon_number 2; exon_id "ENSE00003659608.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7412 chr22 HAVANA CDS 20825637 20825798 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000451553.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-007"; exon_number 2; exon_id "ENSE00003659608.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7413 chr22 HAVANA start_codon 20825796 20825798 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000451553.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-007"; exon_number 2; exon_id "ENSE00003659608.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7414 chr22 HAVANA exon 20819349 20819863 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000451553.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-007"; exon_number 3; exon_id "ENSE00001743160.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7415 chr22 HAVANA CDS 20819349 20819863 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000451553.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-007"; exon_number 3; exon_id "ENSE00001743160.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7416 chr22 HAVANA UTR 20850047 20850089 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000451553.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7417 chr22 HAVANA UTR 20825799 20825802 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000451553.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7418 chr22 HAVANA transcript 20819467 20850085 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7419 chr22 HAVANA exon 20850047 20850085 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; exon_number 1; exon_id "ENSE00001604562.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7420 chr22 HAVANA exon 20845421 20845518 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; exon_number 2; exon_id "ENSE00001690933.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7421 chr22 HAVANA exon 20844055 20844139 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; exon_number 3; exon_id "ENSE00001616376.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7422 chr22 HAVANA CDS 20844055 20844117 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; exon_number 3; exon_id "ENSE00001616376.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7423 chr22 HAVANA start_codon 20844115 20844117 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; exon_number 3; exon_id "ENSE00001616376.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7424 chr22 HAVANA exon 20843272 20843531 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; exon_number 4; exon_id "ENSE00003682582.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7425 chr22 HAVANA CDS 20843272 20843531 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; exon_number 4; exon_id "ENSE00003682582.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7426 chr22 HAVANA exon 20825637 20825802 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; exon_number 5; exon_id "ENSE00003469926.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7427 chr22 HAVANA CDS 20825637 20825802 . - 1 gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; exon_number 5; exon_id "ENSE00003469926.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7428 chr22 HAVANA exon 20819467 20819863 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; exon_number 6; exon_id "ENSE00001629628.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7429 chr22 HAVANA CDS 20819467 20819863 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; exon_number 6; exon_id "ENSE00001629628.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7430 chr22 HAVANA UTR 20850047 20850085 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7431 chr22 HAVANA UTR 20845421 20845518 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7432 chr22 HAVANA UTR 20844118 20844139 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000444967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-008"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320130.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7433 chr22 HAVANA transcript 20819552 20850082 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000458248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-010"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320132.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7434 chr22 HAVANA exon 20850047 20850082 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000458248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-010"; exon_number 1; exon_id "ENSE00001731680.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320132.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7435 chr22 HAVANA exon 20843272 20843499 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000458248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-010"; exon_number 2; exon_id "ENSE00001609786.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320132.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7436 chr22 HAVANA CDS 20843272 20843498 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000458248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-010"; exon_number 2; exon_id "ENSE00001609786.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320132.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7437 chr22 HAVANA start_codon 20843496 20843498 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000458248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-010"; exon_number 2; exon_id "ENSE00001609786.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320132.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7438 chr22 HAVANA exon 20825637 20825802 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000458248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-010"; exon_number 3; exon_id "ENSE00003469926.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320132.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7439 chr22 HAVANA CDS 20825637 20825802 . - 1 gene_id "ENSG00000099910.12"; transcript_id "ENST00000458248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-010"; exon_number 3; exon_id "ENSE00003469926.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320132.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7440 chr22 HAVANA exon 20819552 20819863 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000458248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-010"; exon_number 4; exon_id "ENSE00001805116.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320132.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7441 chr22 HAVANA CDS 20819552 20819863 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000458248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-010"; exon_number 4; exon_id "ENSE00001805116.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320132.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7442 chr22 HAVANA UTR 20850047 20850082 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000458248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-010"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320132.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7443 chr22 HAVANA UTR 20843499 20843499 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000458248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KLHL22-010"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320132.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
7444 chr22 HAVANA transcript 20819604 20850082 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000443285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-009"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7445 chr22 HAVANA exon 20850047 20850082 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000443285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-009"; exon_number 1; exon_id "ENSE00001731680.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7446 chr22 HAVANA exon 20847435 20847504 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000443285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-009"; exon_number 2; exon_id "ENSE00001620051.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7447 chr22 HAVANA CDS 20847435 20847503 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000443285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-009"; exon_number 2; exon_id "ENSE00001620051.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7448 chr22 HAVANA start_codon 20847501 20847503 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000443285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-009"; exon_number 2; exon_id "ENSE00001620051.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7449 chr22 HAVANA exon 20843272 20843531 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000443285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-009"; exon_number 3; exon_id "ENSE00003682582.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7450 chr22 HAVANA CDS 20843272 20843531 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000443285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-009"; exon_number 3; exon_id "ENSE00003682582.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7451 chr22 HAVANA exon 20825637 20825802 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000443285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-009"; exon_number 4; exon_id "ENSE00003469926.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7452 chr22 HAVANA CDS 20825637 20825802 . - 1 gene_id "ENSG00000099910.12"; transcript_id "ENST00000443285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-009"; exon_number 4; exon_id "ENSE00003469926.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7453 chr22 HAVANA exon 20819604 20819863 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000443285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-009"; exon_number 5; exon_id "ENSE00001697969.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7454 chr22 HAVANA CDS 20819604 20819863 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000443285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-009"; exon_number 5; exon_id "ENSE00001697969.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7455 chr22 HAVANA UTR 20850047 20850082 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000443285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-009"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7456 chr22 HAVANA UTR 20847504 20847504 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000443285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-009"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7457 chr22 HAVANA transcript 20819679 20850104 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000494929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-012"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320134.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7458 chr22 HAVANA exon 20850047 20850104 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000494929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-012"; exon_number 1; exon_id "ENSE00001894204.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320134.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7459 chr22 HAVANA exon 20843272 20843531 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000494929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-012"; exon_number 2; exon_id "ENSE00003554240.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320134.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7460 chr22 HAVANA exon 20819679 20819910 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000494929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-012"; exon_number 3; exon_id "ENSE00001839850.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320134.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7461 chr22 HAVANA transcript 20819829 20850110 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000431430.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "KLHL22-006"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320128.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7462 chr22 HAVANA exon 20850047 20850110 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000431430.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "KLHL22-006"; exon_number 1; exon_id "ENSE00001675951.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320128.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7463 chr22 HAVANA exon 20843272 20843531 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000431430.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "KLHL22-006"; exon_number 2; exon_id "ENSE00003616753.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320128.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7464 chr22 HAVANA CDS 20843272 20843498 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000431430.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "KLHL22-006"; exon_number 2; exon_id "ENSE00003616753.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320128.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7465 chr22 HAVANA start_codon 20843496 20843498 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000431430.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "KLHL22-006"; exon_number 2; exon_id "ENSE00003616753.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320128.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7466 chr22 HAVANA exon 20825637 20825802 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000431430.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "KLHL22-006"; exon_number 3; exon_id "ENSE00003469926.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320128.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7467 chr22 HAVANA CDS 20825637 20825802 . - 1 gene_id "ENSG00000099910.12"; transcript_id "ENST00000431430.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "KLHL22-006"; exon_number 3; exon_id "ENSE00003469926.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320128.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7468 chr22 HAVANA exon 20819829 20819910 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000431430.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "KLHL22-006"; exon_number 4; exon_id "ENSE00001613921.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320128.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7469 chr22 HAVANA CDS 20819829 20819910 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000431430.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "KLHL22-006"; exon_number 4; exon_id "ENSE00001613921.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320128.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7470 chr22 HAVANA UTR 20850047 20850110 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000431430.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "KLHL22-006"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320128.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7471 chr22 HAVANA UTR 20843499 20843531 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000431430.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "KLHL22-006"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320128.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7472 chr22 HAVANA transcript 20837915 20850131 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000470335.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-005"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320127.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7473 chr22 HAVANA exon 20850047 20850131 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000470335.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-005"; exon_number 1; exon_id "ENSE00001880402.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320127.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7474 chr22 HAVANA exon 20843272 20843531 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000470335.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-005"; exon_number 2; exon_id "ENSE00003554240.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320127.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7475 chr22 HAVANA exon 20837915 20838393 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000470335.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-005"; exon_number 3; exon_id "ENSE00001865130.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320127.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7476 chr22 HAVANA transcript 20842818 20846340 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000490556.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-014"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320136.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7477 chr22 HAVANA exon 20846138 20846340 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000490556.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-014"; exon_number 1; exon_id "ENSE00001913451.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320136.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7478 chr22 HAVANA exon 20842818 20843322 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000490556.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "KLHL22-014"; exon_number 2; exon_id "ENSE00001882332.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320136.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7479 chr22 HAVANA transcript 20843272 20845844 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000423364.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-011"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320133.40";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7480 chr22 HAVANA exon 20845421 20845844 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000423364.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-011"; exon_number 1; exon_id "ENSE00001638295.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320133.40";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7481 chr22 HAVANA exon 20844055 20844139 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000423364.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-011"; exon_number 2; exon_id "ENSE00001616376.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320133.40";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7482 chr22 HAVANA CDS 20844055 20844117 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000423364.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-011"; exon_number 2; exon_id "ENSE00001616376.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320133.40";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7483 chr22 HAVANA start_codon 20844115 20844117 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000423364.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-011"; exon_number 2; exon_id "ENSE00001616376.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320133.40";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7484 chr22 HAVANA exon 20843272 20843531 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000423364.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-011"; exon_number 3; exon_id "ENSE00003509685.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320133.40";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7485 chr22 HAVANA CDS 20843272 20843531 . - 0 gene_id "ENSG00000099910.12"; transcript_id "ENST00000423364.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-011"; exon_number 3; exon_id "ENSE00003509685.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320133.40";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7486 chr22 HAVANA UTR 20845421 20845844 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000423364.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-011"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320133.40";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7487 chr22 HAVANA UTR 20844118 20844139 . - . gene_id "ENSG00000099910.12"; transcript_id "ENST00000423364.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KLHL22"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "KLHL22-011"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150778.43"; havana_transcript "OTTHUMT00000320133.40";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7488 chr22 HAVANA gene 20804409 20806111 . + . gene_id "ENSG00000215493.3"; transcript_id "ENSG00000215493.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B562F10.11"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B562F10.11"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000151320.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7489 chr22 HAVANA transcript 20804409 20806111 . + . gene_id "ENSG00000215493.3"; transcript_id "ENST00000426448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B562F10.11"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B562F10.11-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000151320.1"; havana_transcript "OTTHUMT00000322217.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7490 chr22 HAVANA exon 20804409 20806111 . + . gene_id "ENSG00000215493.3"; transcript_id "ENST00000426448.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "XXbac-B562F10.11"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "XXbac-B562F10.11-001"; exon_number 1; exon_id "ENSE00001786457.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000151320.1"; havana_transcript "OTTHUMT00000322217.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7491 chr22 HAVANA gene 20829490 20829598 . - . gene_id "ENSG00000255156.1"; transcript_id "ENSG00000255156.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "KLHL22-IT1"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "KLHL22-IT1"; level 2; havana_gene "OTTHUMG00000165837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7492 chr22 HAVANA transcript 20829490 20829598 . - . gene_id "ENSG00000255156.1"; transcript_id "ENST00000532431.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "KLHL22-IT1"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "KLHL22-IT1-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000165837.1"; havana_transcript "OTTHUMT00000386589.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7493 chr22 HAVANA exon 20829490 20829598 . - . gene_id "ENSG00000255156.1"; transcript_id "ENST00000532431.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "KLHL22-IT1"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "KLHL22-IT1-001"; exon_number 1; exon_id "ENSE00003511423.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000165837.1"; havana_transcript "OTTHUMT00000386589.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7494 chr22 ENSEMBL gene 20835445 20835555 . + . gene_id "ENSG00000201916.1"; transcript_id "ENSG00000201916.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Y_RNA"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Y_RNA"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7495 chr22 ENSEMBL transcript 20835445 20835555 . + . gene_id "ENSG00000201916.1"; transcript_id "ENST00000365046.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Y_RNA"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Y_RNA.338-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7496 chr22 ENSEMBL exon 20835445 20835555 . + . gene_id "ENSG00000201916.1"; transcript_id "ENST00000365046.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Y_RNA"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Y_RNA.338-201"; exon_number 1; exon_id "ENSE00001439809.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7497 chr22 ENSEMBL gene 20836224 20836497 . - . gene_id "ENSG00000242876.2"; transcript_id "ENSG00000242876.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL812P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL812P"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7498 chr22 ENSEMBL transcript 20836224 20836497 . - . gene_id "ENSG00000242876.2"; transcript_id "ENST00000493791.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL812P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL812P-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7499 chr22 ENSEMBL exon 20836224 20836497 . - . gene_id "ENSG00000242876.2"; transcript_id "ENST00000493791.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL812P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL812P-201"; exon_number 1; exon_id "ENSE00001908872.2"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7500 chr22 HAVANA gene 20837102 20838392 . - . gene_id "ENSG00000236670.1"; transcript_id "ENSG00000236670.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRT18P5"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "KRT18P5"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150808.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7501 chr22 HAVANA transcript 20837102 20838392 . - . gene_id "ENSG00000236670.1"; transcript_id "ENST00000436075.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRT18P5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KRT18P5-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150808.1"; havana_transcript "OTTHUMT00000320160.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7502 chr22 HAVANA exon 20837102 20838392 . - . gene_id "ENSG00000236670.1"; transcript_id "ENST00000436075.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRT18P5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KRT18P5-001"; exon_number 1; exon_id "ENSE00001800622.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150808.1"; havana_transcript "OTTHUMT00000320160.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7503 chr22 ENSEMBL gene 20837512 20837603 . - . gene_id "ENSG00000265300.1"; transcript_id "ENSG00000265300.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AC007731.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AC007731.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
7504 chr22 ENSEMBL transcript 20837512 20837603 . - . gene_id "ENSG00000265300.1"; transcript_id "ENST00000578704.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AC007731.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AC007731.1-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7505 chr22 ENSEMBL exon 20837512 20837603 . - . gene_id "ENSG00000265300.1"; transcript_id "ENST00000578704.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AC007731.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AC007731.1-201"; exon_number 1; exon_id "ENSE00002697657.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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7506 chr22 HAVANA gene 20850200 20941919 . + . gene_id "ENSG00000099917.13"; transcript_id "ENSG00000099917.13"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15"; level 2; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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7507 chr22 HAVANA transcript 20850200 20909422 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
7508 chr22 HAVANA exon 20850200 20850323 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; exon_number 1; exon_id "ENSE00001719061.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
7509 chr22 HAVANA exon 20855028 20855123 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; exon_number 2; exon_id "ENSE00001777500.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
7510 chr22 HAVANA exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; exon_number 3; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
7511 chr22 HAVANA CDS 20891414 20891491 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; exon_number 3; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
7512 chr22 HAVANA start_codon 20891414 20891416 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; exon_number 3; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
7513 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; exon_number 4; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7514 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; exon_number 4; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7515 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; exon_number 5; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7516 chr22 HAVANA CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; exon_number 5; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7517 chr22 HAVANA exon 20909223 20909422 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; exon_number 6; exon_id "ENSE00001674257.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7518 chr22 HAVANA CDS 20909223 20909422 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; exon_number 6; exon_id "ENSE00001674257.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7519 chr22 HAVANA UTR 20850200 20850323 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7520 chr22 HAVANA UTR 20855028 20855123 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7521 chr22 HAVANA UTR 20891404 20891413 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-015"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320314.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7522 chr22 HAVANA transcript 20861828 20918780 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000444094.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-009"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320228.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7523 chr22 HAVANA exon 20861828 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000444094.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-009"; exon_number 1; exon_id "ENSE00001705690.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320228.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7524 chr22 HAVANA CDS 20861966 20862033 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000444094.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-009"; exon_number 1; exon_id "ENSE00001705690.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320228.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7525 chr22 HAVANA start_codon 20861966 20861968 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000444094.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-009"; exon_number 1; exon_id "ENSE00001705690.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320228.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7526 chr22 HAVANA exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000444094.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-009"; exon_number 2; exon_id "ENSE00003483235.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320228.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7527 chr22 HAVANA CDS 20891404 20891491 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000444094.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-009"; exon_number 2; exon_id "ENSE00003483235.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320228.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7528 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000444094.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-009"; exon_number 3; exon_id "ENSE00003506421.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320228.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7529 chr22 HAVANA CDS 20909223 20909228 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000444094.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-009"; exon_number 3; exon_id "ENSE00003506421.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320228.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7530 chr22 HAVANA stop_codon 20909229 20909231 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000444094.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-009"; exon_number 3; exon_id "ENSE00003506421.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320228.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7531 chr22 HAVANA exon 20918737 20918780 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000444094.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-009"; exon_number 4; exon_id "ENSE00001781793.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320228.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7532 chr22 HAVANA UTR 20861828 20861965 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000444094.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-009"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320228.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7533 chr22 HAVANA UTR 20909229 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000444094.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-009"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320228.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7534 chr22 HAVANA UTR 20918737 20918780 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000444094.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-009"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320228.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7535 chr22 HAVANA transcript 20861869 20906035 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000486656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-019"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320318.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7536 chr22 HAVANA exon 20861869 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000486656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-019"; exon_number 1; exon_id "ENSE00001606006.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320318.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7537 chr22 HAVANA exon 20891404 20891502 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000486656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-019"; exon_number 2; exon_id "ENSE00003548031.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320318.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7538 chr22 HAVANA exon 20905723 20906035 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000486656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-019"; exon_number 3; exon_id "ENSE00001889756.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320318.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7539 chr22 HAVANA transcript 20861869 20918787 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7540 chr22 HAVANA exon 20861869 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; exon_number 1; exon_id "ENSE00001606006.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7541 chr22 HAVANA exon 20873165 20873282 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; exon_number 2; exon_id "ENSE00003615557.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7542 chr22 HAVANA exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; exon_number 3; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7543 chr22 HAVANA CDS 20891414 20891491 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; exon_number 3; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7544 chr22 HAVANA start_codon 20891414 20891416 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; exon_number 3; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7545 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; exon_number 4; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7546 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; exon_number 4; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7547 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; exon_number 5; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7548 chr22 HAVANA CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; exon_number 5; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7549 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; exon_number 6; exon_id "ENSE00003646427.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7550 chr22 HAVANA CDS 20909223 20909435 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; exon_number 6; exon_id "ENSE00003646427.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7551 chr22 HAVANA exon 20918737 20918787 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; exon_number 7; exon_id "ENSE00001757267.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7552 chr22 HAVANA CDS 20918737 20918787 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; exon_number 7; exon_id "ENSE00001757267.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7553 chr22 HAVANA UTR 20861869 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7554 chr22 HAVANA UTR 20873165 20873282 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7555 chr22 HAVANA UTR 20891404 20891413 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000414658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7556 chr22 HAVANA transcript 20861872 20941906 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7557 chr22 HAVANA exon 20861872 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 1; exon_id "ENSE00001650666.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7558 chr22 HAVANA CDS 20861966 20862033 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 1; exon_id "ENSE00001650666.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7559 chr22 HAVANA start_codon 20861966 20861968 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 1; exon_id "ENSE00001650666.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7560 chr22 HAVANA exon 20891404 20891502 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 2; exon_id "ENSE00003577709.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7561 chr22 HAVANA CDS 20891404 20891500 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 2; exon_id "ENSE00003577709.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7562 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 3; exon_id "ENSE00003614014.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7563 chr22 HAVANA stop_codon 20891501 20891502 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 2; exon_id "ENSE00003614014.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7564 chr22 HAVANA stop_codon 20905723 20905723 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 3; exon_id "ENSE00003614014.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7565 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 4; exon_id "ENSE00003501969.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7566 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 5; exon_id "ENSE00003640727.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7567 chr22 HAVANA exon 20918737 20918975 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 6; exon_id "ENSE00003618357.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7568 chr22 HAVANA exon 20920754 20921104 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 7; exon_id "ENSE00003621492.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7569 chr22 HAVANA exon 20922808 20922918 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 8; exon_id "ENSE00003482544.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7570 chr22 HAVANA exon 20936898 20937034 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 9; exon_id "ENSE00003601574.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7571 chr22 HAVANA exon 20937127 20937254 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 10; exon_id "ENSE00003538199.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7572 chr22 HAVANA exon 20937400 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 11; exon_id "ENSE00003471122.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7573 chr22 HAVANA exon 20937617 20937680 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 12; exon_id "ENSE00003646756.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7574 chr22 HAVANA exon 20938646 20938712 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 13; exon_id "ENSE00003572924.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7575 chr22 HAVANA exon 20939142 20939302 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 14; exon_id "ENSE00003579334.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7576 chr22 HAVANA exon 20939388 20939554 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 15; exon_id "ENSE00003556581.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7577 chr22 HAVANA exon 20940015 20940113 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 16; exon_id "ENSE00003526321.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7578 chr22 HAVANA exon 20940855 20941906 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; exon_number 17; exon_id "ENSE00003575989.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7579 chr22 HAVANA UTR 20861872 20861965 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7580 chr22 HAVANA UTR 20891501 20891502 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7581 chr22 HAVANA UTR 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7582 chr22 HAVANA UTR 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7583 chr22 HAVANA UTR 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7584 chr22 HAVANA UTR 20918737 20918975 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7585 chr22 HAVANA UTR 20920754 20921104 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7586 chr22 HAVANA UTR 20922808 20922918 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7587 chr22 HAVANA UTR 20936898 20937034 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7588 chr22 HAVANA UTR 20937127 20937254 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7589 chr22 HAVANA UTR 20937400 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7590 chr22 HAVANA UTR 20937617 20937680 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7591 chr22 HAVANA UTR 20938646 20938712 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7592 chr22 HAVANA UTR 20939142 20939302 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7593 chr22 HAVANA UTR 20939388 20939554 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7594 chr22 HAVANA UTR 20940015 20940113 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7595 chr22 HAVANA UTR 20940855 20941906 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000433831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-003"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320176.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7596 chr22 HAVANA transcript 20861881 20918893 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7597 chr22 HAVANA exon 20861881 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; exon_number 1; exon_id "ENSE00001643233.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7598 chr22 HAVANA exon 20873165 20873282 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; exon_number 2; exon_id "ENSE00003615557.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7599 chr22 HAVANA exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; exon_number 3; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7600 chr22 HAVANA CDS 20891414 20891491 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; exon_number 3; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7601 chr22 HAVANA start_codon 20891414 20891416 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; exon_number 3; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7602 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; exon_number 4; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7603 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; exon_number 4; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7604 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; exon_number 5; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7605 chr22 HAVANA CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; exon_number 5; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7606 chr22 HAVANA exon 20918737 20918893 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; exon_number 6; exon_id "ENSE00001648127.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7607 chr22 HAVANA CDS 20918737 20918893 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; exon_number 6; exon_id "ENSE00001648127.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7608 chr22 HAVANA UTR 20861881 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7609 chr22 HAVANA UTR 20873165 20873282 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7610 chr22 HAVANA UTR 20891404 20891413 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000432052.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-011"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320310.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7611 chr22 ENSEMBL transcript 20861886 20941918 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7612 chr22 ENSEMBL exon 20861886 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 1; exon_id "ENSE00001955774.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7613 chr22 ENSEMBL exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 2; exon_id "ENSE00003564180.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7614 chr22 ENSEMBL CDS 20891456 20891491 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 2; exon_id "ENSE00003564180.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7615 chr22 ENSEMBL start_codon 20891456 20891458 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 2; exon_id "ENSE00003564180.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7616 chr22 ENSEMBL exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 3; exon_id "ENSE00003656976.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7617 chr22 ENSEMBL CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 3; exon_id "ENSE00003656976.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7618 chr22 ENSEMBL exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 4; exon_id "ENSE00003670601.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7619 chr22 ENSEMBL CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 4; exon_id "ENSE00003670601.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7620 chr22 ENSEMBL exon 20918737 20918975 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 5; exon_id "ENSE00003544921.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7621 chr22 ENSEMBL CDS 20918737 20918975 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 5; exon_id "ENSE00003544921.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7622 chr22 ENSEMBL exon 20920754 20921104 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 6; exon_id "ENSE00003640362.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7623 chr22 ENSEMBL CDS 20920754 20921104 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 6; exon_id "ENSE00003640362.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7624 chr22 ENSEMBL exon 20922808 20922918 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 7; exon_id "ENSE00003659259.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7625 chr22 ENSEMBL CDS 20922808 20922918 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 7; exon_id "ENSE00003659259.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7626 chr22 ENSEMBL exon 20936898 20937034 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 8; exon_id "ENSE00003569829.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7627 chr22 ENSEMBL CDS 20936898 20937034 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 8; exon_id "ENSE00003569829.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7628 chr22 ENSEMBL exon 20937127 20937254 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 9; exon_id "ENSE00003575247.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7629 chr22 ENSEMBL CDS 20937127 20937254 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 9; exon_id "ENSE00003575247.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7630 chr22 ENSEMBL exon 20937400 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 10; exon_id "ENSE00003560468.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7631 chr22 ENSEMBL CDS 20937400 20937534 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 10; exon_id "ENSE00003560468.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7632 chr22 ENSEMBL exon 20937617 20937680 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 11; exon_id "ENSE00003652421.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7633 chr22 ENSEMBL CDS 20937617 20937680 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 11; exon_id "ENSE00003652421.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7634 chr22 ENSEMBL exon 20938646 20938712 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 12; exon_id "ENSE00003543591.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7635 chr22 ENSEMBL CDS 20938646 20938712 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 12; exon_id "ENSE00003543591.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7636 chr22 ENSEMBL exon 20939142 20939302 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 13; exon_id "ENSE00003630542.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7637 chr22 ENSEMBL CDS 20939142 20939302 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 13; exon_id "ENSE00003630542.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7638 chr22 ENSEMBL exon 20939388 20939554 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 14; exon_id "ENSE00003550695.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7639 chr22 ENSEMBL CDS 20939388 20939554 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 14; exon_id "ENSE00003550695.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7640 chr22 ENSEMBL exon 20940015 20940113 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 15; exon_id "ENSE00003479224.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7641 chr22 ENSEMBL CDS 20940015 20940113 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 15; exon_id "ENSE00003479224.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7642 chr22 ENSEMBL exon 20940855 20941918 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 16; exon_id "ENSE00001219231.4"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7643 chr22 ENSEMBL CDS 20940855 20940988 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 16; exon_id "ENSE00001219231.4"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7644 chr22 ENSEMBL stop_codon 20940989 20940991 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; exon_number 16; exon_id "ENSE00001219231.4"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7645 chr22 ENSEMBL UTR 20861886 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7646 chr22 ENSEMBL UTR 20891404 20891455 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7647 chr22 ENSEMBL UTR 20940989 20941918 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000425759.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7648 chr22 HAVANA transcript 20861889 20941919 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7649 chr22 HAVANA exon 20861889 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 1; exon_id "ENSE00001934727.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7650 chr22 HAVANA CDS 20861966 20862033 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 1; exon_id "ENSE00001934727.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7651 chr22 HAVANA start_codon 20861966 20861968 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 1; exon_id "ENSE00001934727.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7652 chr22 HAVANA exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 2; exon_id "ENSE00003483235.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7653 chr22 HAVANA CDS 20891404 20891491 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 2; exon_id "ENSE00003483235.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7654 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 3; exon_id "ENSE00003656976.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7655 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 3; exon_id "ENSE00003656976.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7656 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 4; exon_id "ENSE00003670601.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7657 chr22 HAVANA CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 4; exon_id "ENSE00003670601.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7658 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 5; exon_id "ENSE00003646427.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7659 chr22 HAVANA CDS 20909223 20909435 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 5; exon_id "ENSE00003646427.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7660 chr22 HAVANA exon 20918737 20918975 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 6; exon_id "ENSE00003544921.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7661 chr22 HAVANA CDS 20918737 20918975 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 6; exon_id "ENSE00003544921.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7662 chr22 HAVANA exon 20920754 20921104 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 7; exon_id "ENSE00003640362.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7663 chr22 HAVANA CDS 20920754 20921104 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 7; exon_id "ENSE00003640362.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7664 chr22 HAVANA exon 20922808 20922918 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 8; exon_id "ENSE00003659259.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7665 chr22 HAVANA CDS 20922808 20922918 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 8; exon_id "ENSE00003659259.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7666 chr22 HAVANA exon 20936898 20937034 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 9; exon_id "ENSE00003569829.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7667 chr22 HAVANA CDS 20936898 20937034 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 9; exon_id "ENSE00003569829.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7668 chr22 HAVANA exon 20937127 20937254 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 10; exon_id "ENSE00003575247.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7669 chr22 HAVANA CDS 20937127 20937254 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 10; exon_id "ENSE00003575247.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7670 chr22 HAVANA exon 20937400 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 11; exon_id "ENSE00003560468.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7671 chr22 HAVANA CDS 20937400 20937534 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 11; exon_id "ENSE00003560468.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7672 chr22 HAVANA exon 20937617 20937680 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 12; exon_id "ENSE00003652421.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7673 chr22 HAVANA CDS 20937617 20937680 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 12; exon_id "ENSE00003652421.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7674 chr22 HAVANA exon 20938646 20938712 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 13; exon_id "ENSE00003543591.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7675 chr22 HAVANA CDS 20938646 20938712 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 13; exon_id "ENSE00003543591.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7676 chr22 HAVANA exon 20939142 20939302 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 14; exon_id "ENSE00003630542.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7677 chr22 HAVANA CDS 20939142 20939302 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 14; exon_id "ENSE00003630542.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7678 chr22 HAVANA exon 20939388 20939554 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 15; exon_id "ENSE00003550695.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7679 chr22 HAVANA CDS 20939388 20939554 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 15; exon_id "ENSE00003550695.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7680 chr22 HAVANA exon 20940015 20940113 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 16; exon_id "ENSE00003479224.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7681 chr22 HAVANA CDS 20940015 20940113 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 16; exon_id "ENSE00003479224.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7682 chr22 HAVANA exon 20940855 20941919 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 17; exon_id "ENSE00003607087.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7683 chr22 HAVANA CDS 20940855 20940988 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 17; exon_id "ENSE00003607087.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7684 chr22 HAVANA stop_codon 20940989 20940991 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; exon_number 17; exon_id "ENSE00003607087.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7685 chr22 HAVANA UTR 20861889 20861965 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7686 chr22 HAVANA UTR 20940989 20941919 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000292733.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13781.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7687 chr22 ENSEMBL transcript 20861891 20941293 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7688 chr22 ENSEMBL exon 20861891 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 1; exon_id "ENSE00002287606.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7689 chr22 ENSEMBL exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 2; exon_id "ENSE00003571275.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7690 chr22 ENSEMBL exon 20918737 20918975 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 3; exon_id "ENSE00003598151.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7691 chr22 ENSEMBL CDS 20918871 20918975 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 3; exon_id "ENSE00003598151.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7692 chr22 ENSEMBL start_codon 20918871 20918873 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 3; exon_id "ENSE00003598151.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7693 chr22 ENSEMBL exon 20920754 20921104 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 4; exon_id "ENSE00003640362.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7694 chr22 ENSEMBL CDS 20920754 20921104 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 4; exon_id "ENSE00003640362.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7695 chr22 ENSEMBL exon 20922808 20922918 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 5; exon_id "ENSE00003659259.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7696 chr22 ENSEMBL CDS 20922808 20922918 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 5; exon_id "ENSE00003659259.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7697 chr22 ENSEMBL exon 20937400 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 6; exon_id "ENSE00003470437.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7698 chr22 ENSEMBL stop_codon 20937400 20937402 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 6; exon_id "ENSE00003470437.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7699 chr22 ENSEMBL exon 20937617 20937680 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 7; exon_id "ENSE00003646756.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7700 chr22 ENSEMBL exon 20938646 20938712 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 8; exon_id "ENSE00003572924.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7701 chr22 ENSEMBL exon 20939142 20939554 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 9; exon_id "ENSE00002298812.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7702 chr22 ENSEMBL exon 20940015 20940113 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 10; exon_id "ENSE00003526321.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7703 chr22 ENSEMBL exon 20940855 20941293 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; exon_number 11; exon_id "ENSE00002289458.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7704 chr22 ENSEMBL UTR 20861891 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7705 chr22 ENSEMBL UTR 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7706 chr22 ENSEMBL UTR 20918737 20918870 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7707 chr22 ENSEMBL UTR 20937400 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7708 chr22 ENSEMBL UTR 20937617 20937680 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7709 chr22 ENSEMBL UTR 20938646 20938712 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7710 chr22 ENSEMBL UTR 20939142 20939554 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7711 chr22 ENSEMBL UTR 20940015 20940113 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7712 chr22 ENSEMBL UTR 20940855 20941293 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000542773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150810.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7713 chr22 HAVANA transcript 20861897 20941906 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7714 chr22 HAVANA exon 20861897 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 1; exon_id "ENSE00001871169.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7715 chr22 HAVANA CDS 20861966 20862033 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 1; exon_id "ENSE00001871169.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7716 chr22 HAVANA start_codon 20861966 20861968 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 1; exon_id "ENSE00001871169.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7717 chr22 HAVANA exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 2; exon_id "ENSE00003483235.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7718 chr22 HAVANA CDS 20891404 20891491 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 2; exon_id "ENSE00003483235.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7719 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 3; exon_id "ENSE00003656976.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7720 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 3; exon_id "ENSE00003656976.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7721 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 4; exon_id "ENSE00003670601.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7722 chr22 HAVANA CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 4; exon_id "ENSE00003670601.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7723 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 5; exon_id "ENSE00003646427.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7724 chr22 HAVANA CDS 20909223 20909435 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 5; exon_id "ENSE00003646427.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7725 chr22 HAVANA exon 20918737 20918975 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 6; exon_id "ENSE00003544921.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7726 chr22 HAVANA CDS 20918737 20918975 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 6; exon_id "ENSE00003544921.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7727 chr22 HAVANA exon 20920754 20921104 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 7; exon_id "ENSE00003640362.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7728 chr22 HAVANA CDS 20920754 20921104 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 7; exon_id "ENSE00003640362.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7729 chr22 HAVANA exon 20922808 20922918 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 8; exon_id "ENSE00003659259.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7730 chr22 HAVANA CDS 20922808 20922918 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 8; exon_id "ENSE00003659259.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7731 chr22 HAVANA exon 20929400 20929519 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 9; exon_id "ENSE00001309980.3"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7732 chr22 HAVANA CDS 20929400 20929519 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 9; exon_id "ENSE00001309980.3"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7733 chr22 HAVANA exon 20936898 20937034 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 10; exon_id "ENSE00003569829.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7734 chr22 HAVANA CDS 20936898 20937034 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 10; exon_id "ENSE00003569829.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7735 chr22 HAVANA exon 20937127 20937254 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 11; exon_id "ENSE00003575247.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7736 chr22 HAVANA CDS 20937127 20937254 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 11; exon_id "ENSE00003575247.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7737 chr22 HAVANA exon 20937400 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 12; exon_id "ENSE00003560468.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7738 chr22 HAVANA CDS 20937400 20937534 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 12; exon_id "ENSE00003560468.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7739 chr22 HAVANA exon 20937617 20937680 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 13; exon_id "ENSE00003652421.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7740 chr22 HAVANA CDS 20937617 20937680 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 13; exon_id "ENSE00003652421.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7741 chr22 HAVANA exon 20938646 20938712 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 14; exon_id "ENSE00003543591.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7742 chr22 HAVANA CDS 20938646 20938712 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 14; exon_id "ENSE00003543591.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7743 chr22 HAVANA exon 20939142 20939302 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 15; exon_id "ENSE00003630542.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7744 chr22 HAVANA CDS 20939142 20939302 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 15; exon_id "ENSE00003630542.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7745 chr22 HAVANA exon 20939388 20939554 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 16; exon_id "ENSE00003550695.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7746 chr22 HAVANA CDS 20939388 20939554 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 16; exon_id "ENSE00003550695.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7747 chr22 HAVANA exon 20940015 20940113 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 17; exon_id "ENSE00003479224.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7748 chr22 HAVANA CDS 20940015 20940113 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 17; exon_id "ENSE00003479224.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7749 chr22 HAVANA exon 20940855 20941906 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 18; exon_id "ENSE00003576775.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7750 chr22 HAVANA CDS 20940855 20940988 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 18; exon_id "ENSE00003576775.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7751 chr22 HAVANA stop_codon 20940989 20940991 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; exon_number 18; exon_id "ENSE00003576775.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7752 chr22 HAVANA UTR 20861897 20861965 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7753 chr22 HAVANA UTR 20940989 20941906 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000263205.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33602.1"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7754 chr22 HAVANA transcript 20861899 20918753 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000477824.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-012"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320311.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7755 chr22 HAVANA exon 20861899 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000477824.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-012"; exon_number 1; exon_id "ENSE00001838243.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320311.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7756 chr22 HAVANA exon 20873165 20873282 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000477824.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-012"; exon_number 2; exon_id "ENSE00003615557.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320311.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7757 chr22 HAVANA exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000477824.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-012"; exon_number 3; exon_id "ENSE00003571275.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320311.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7758 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000477824.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-012"; exon_number 4; exon_id "ENSE00003640727.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320311.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7759 chr22 HAVANA exon 20918737 20918753 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000477824.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-012"; exon_number 5; exon_id "ENSE00001853643.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320311.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7760 chr22 HAVANA transcript 20861905 20941904 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7761 chr22 HAVANA exon 20861905 20862022 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 1; exon_id "ENSE00001561776.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7762 chr22 HAVANA exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 2; exon_id "ENSE00003564180.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7763 chr22 HAVANA CDS 20891414 20891491 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 2; exon_id "ENSE00003564180.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7764 chr22 HAVANA start_codon 20891414 20891416 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 2; exon_id "ENSE00003564180.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7765 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 3; exon_id "ENSE00003656976.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7766 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 3; exon_id "ENSE00003656976.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7767 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 4; exon_id "ENSE00003670601.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7768 chr22 HAVANA CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 4; exon_id "ENSE00003670601.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7769 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 5; exon_id "ENSE00003646427.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7770 chr22 HAVANA CDS 20909223 20909435 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 5; exon_id "ENSE00003646427.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7771 chr22 HAVANA exon 20918737 20918975 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 6; exon_id "ENSE00003544921.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7772 chr22 HAVANA CDS 20918737 20918975 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 6; exon_id "ENSE00003544921.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7773 chr22 HAVANA exon 20920754 20921104 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 7; exon_id "ENSE00003640362.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7774 chr22 HAVANA CDS 20920754 20921104 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 7; exon_id "ENSE00003640362.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7775 chr22 HAVANA exon 20922808 20922918 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 8; exon_id "ENSE00003659259.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7776 chr22 HAVANA CDS 20922808 20922918 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 8; exon_id "ENSE00003659259.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7777 chr22 HAVANA exon 20936898 20937034 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 9; exon_id "ENSE00003569829.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7778 chr22 HAVANA CDS 20936898 20937034 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 9; exon_id "ENSE00003569829.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7779 chr22 HAVANA exon 20937127 20937254 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 10; exon_id "ENSE00003575247.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7780 chr22 HAVANA CDS 20937127 20937254 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 10; exon_id "ENSE00003575247.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7781 chr22 HAVANA exon 20937400 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 11; exon_id "ENSE00003560468.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7782 chr22 HAVANA CDS 20937400 20937534 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 11; exon_id "ENSE00003560468.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7783 chr22 HAVANA exon 20937617 20937680 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 12; exon_id "ENSE00003652421.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7784 chr22 HAVANA CDS 20937617 20937680 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 12; exon_id "ENSE00003652421.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7785 chr22 HAVANA exon 20938646 20938712 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 13; exon_id "ENSE00003543591.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7786 chr22 HAVANA CDS 20938646 20938712 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 13; exon_id "ENSE00003543591.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7787 chr22 HAVANA exon 20939142 20939302 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 14; exon_id "ENSE00003630542.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7788 chr22 HAVANA CDS 20939142 20939302 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 14; exon_id "ENSE00003630542.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7789 chr22 HAVANA exon 20939388 20939554 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 15; exon_id "ENSE00003550695.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7790 chr22 HAVANA CDS 20939388 20939554 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 15; exon_id "ENSE00003550695.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7791 chr22 HAVANA exon 20940015 20940113 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 16; exon_id "ENSE00003479224.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7792 chr22 HAVANA CDS 20940015 20940113 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 16; exon_id "ENSE00003479224.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7793 chr22 HAVANA exon 20940855 20941904 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 17; exon_id "ENSE00003600085.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7794 chr22 HAVANA CDS 20940855 20940988 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 17; exon_id "ENSE00003600085.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7795 chr22 HAVANA stop_codon 20940989 20940991 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; exon_number 17; exon_id "ENSE00003600085.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7796 chr22 HAVANA UTR 20861905 20862022 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7797 chr22 HAVANA UTR 20891404 20891413 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7798 chr22 HAVANA UTR 20940989 20941904 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000406969.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7799 chr22 HAVANA transcript 20861928 20941154 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7800 chr22 HAVANA exon 20861928 20862033 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 1; exon_id "ENSE00001879456.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7801 chr22 HAVANA CDS 20861966 20862033 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 1; exon_id "ENSE00001879456.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7802 chr22 HAVANA start_codon 20861966 20861968 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 1; exon_id "ENSE00001879456.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7803 chr22 HAVANA exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 2; exon_id "ENSE00003483235.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7804 chr22 HAVANA CDS 20891404 20891491 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 2; exon_id "ENSE00003483235.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7805 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 3; exon_id "ENSE00003656976.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7806 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 3; exon_id "ENSE00003656976.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7807 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 4; exon_id "ENSE00003670601.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7808 chr22 HAVANA CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 4; exon_id "ENSE00003670601.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7809 chr22 HAVANA exon 20918737 20918975 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 5; exon_id "ENSE00003544921.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7810 chr22 HAVANA CDS 20918737 20918975 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 5; exon_id "ENSE00003544921.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7811 chr22 HAVANA exon 20920754 20921104 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 6; exon_id "ENSE00003640362.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7812 chr22 HAVANA CDS 20920754 20921104 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 6; exon_id "ENSE00003640362.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7813 chr22 HAVANA exon 20922808 20922918 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 7; exon_id "ENSE00003659259.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7814 chr22 HAVANA CDS 20922808 20922918 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 7; exon_id "ENSE00003659259.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7815 chr22 HAVANA exon 20936898 20937034 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 8; exon_id "ENSE00003569829.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7816 chr22 HAVANA CDS 20936898 20937034 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 8; exon_id "ENSE00003569829.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7817 chr22 HAVANA exon 20937127 20937254 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 9; exon_id "ENSE00003575247.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7818 chr22 HAVANA CDS 20937127 20937254 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 9; exon_id "ENSE00003575247.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7819 chr22 HAVANA exon 20937400 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 10; exon_id "ENSE00003560468.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7820 chr22 HAVANA CDS 20937400 20937534 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 10; exon_id "ENSE00003560468.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7821 chr22 HAVANA exon 20937617 20937680 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 11; exon_id "ENSE00003652421.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7822 chr22 HAVANA CDS 20937617 20937680 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 11; exon_id "ENSE00003652421.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7823 chr22 HAVANA exon 20938646 20938712 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 12; exon_id "ENSE00003543591.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7824 chr22 HAVANA CDS 20938646 20938712 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 12; exon_id "ENSE00003543591.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7825 chr22 HAVANA exon 20939142 20939302 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 13; exon_id "ENSE00003630542.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7826 chr22 HAVANA CDS 20939142 20939302 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 13; exon_id "ENSE00003630542.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7827 chr22 HAVANA exon 20939388 20939554 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 14; exon_id "ENSE00003550695.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7828 chr22 HAVANA CDS 20939388 20939554 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 14; exon_id "ENSE00003550695.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7829 chr22 HAVANA exon 20940015 20940113 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 15; exon_id "ENSE00003479224.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7830 chr22 HAVANA CDS 20940015 20940113 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 15; exon_id "ENSE00003479224.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7831 chr22 HAVANA exon 20940855 20941154 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 16; exon_id "ENSE00001760202.2"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7832 chr22 HAVANA CDS 20940855 20940988 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 16; exon_id "ENSE00001760202.2"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7833 chr22 HAVANA stop_codon 20940989 20940991 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; exon_number 16; exon_id "ENSE00001760202.2"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7834 chr22 HAVANA UTR 20861928 20861965 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7835 chr22 HAVANA UTR 20940989 20941154 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000382974.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-006"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7836 chr22 HAVANA transcript 20862335 20918796 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7837 chr22 HAVANA exon 20862335 20862731 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; exon_number 1; exon_id "ENSE00001681492.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7838 chr22 HAVANA CDS 20862560 20862731 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; exon_number 1; exon_id "ENSE00001681492.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7839 chr22 HAVANA start_codon 20862560 20862562 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; exon_number 1; exon_id "ENSE00001681492.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7840 chr22 HAVANA exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; exon_number 2; exon_id "ENSE00003614155.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7841 chr22 HAVANA CDS 20891404 20891414 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; exon_number 2; exon_id "ENSE00003614155.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7842 chr22 HAVANA stop_codon 20891415 20891417 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; exon_number 2; exon_id "ENSE00003614155.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7843 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; exon_number 3; exon_id "ENSE00003514193.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7844 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; exon_number 4; exon_id "ENSE00003501969.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7845 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; exon_number 5; exon_id "ENSE00003640727.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7846 chr22 HAVANA exon 20918737 20918796 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; exon_number 6; exon_id "ENSE00001620407.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7847 chr22 HAVANA UTR 20862335 20862559 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7848 chr22 HAVANA UTR 20891415 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7849 chr22 HAVANA UTR 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7850 chr22 HAVANA UTR 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7851 chr22 HAVANA UTR 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7852 chr22 HAVANA UTR 20918737 20918796 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000441501.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-013"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320312.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7853 chr22 HAVANA transcript 20862339 20941122 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7854 chr22 HAVANA exon 20862339 20862731 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 1; exon_id "ENSE00002305463.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7855 chr22 HAVANA exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 2; exon_id "ENSE00003564180.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7856 chr22 HAVANA CDS 20891414 20891491 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 2; exon_id "ENSE00003564180.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7857 chr22 HAVANA start_codon 20891414 20891416 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 2; exon_id "ENSE00003564180.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7858 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 3; exon_id "ENSE00003656976.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7859 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 3; exon_id "ENSE00003656976.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7860 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 4; exon_id "ENSE00003670601.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7861 chr22 HAVANA CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 4; exon_id "ENSE00003670601.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7862 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 5; exon_id "ENSE00003646427.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7863 chr22 HAVANA CDS 20909223 20909435 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 5; exon_id "ENSE00003646427.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7864 chr22 HAVANA exon 20918737 20918975 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 6; exon_id "ENSE00003544921.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7865 chr22 HAVANA CDS 20918737 20918975 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 6; exon_id "ENSE00003544921.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7866 chr22 HAVANA exon 20920754 20921104 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 7; exon_id "ENSE00003640362.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7867 chr22 HAVANA CDS 20920754 20921104 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 7; exon_id "ENSE00003640362.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7868 chr22 HAVANA exon 20922808 20922918 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 8; exon_id "ENSE00003659259.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7869 chr22 HAVANA CDS 20922808 20922918 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 8; exon_id "ENSE00003659259.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7870 chr22 HAVANA exon 20936898 20937034 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 9; exon_id "ENSE00003569829.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7871 chr22 HAVANA CDS 20936898 20937034 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 9; exon_id "ENSE00003569829.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7872 chr22 HAVANA exon 20937127 20937254 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 10; exon_id "ENSE00003575247.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7873 chr22 HAVANA CDS 20937127 20937254 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 10; exon_id "ENSE00003575247.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7874 chr22 HAVANA exon 20937400 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 11; exon_id "ENSE00003560468.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7875 chr22 HAVANA CDS 20937400 20937534 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 11; exon_id "ENSE00003560468.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7876 chr22 HAVANA exon 20937617 20937680 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 12; exon_id "ENSE00003652421.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7877 chr22 HAVANA CDS 20937617 20937680 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 12; exon_id "ENSE00003652421.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7878 chr22 HAVANA exon 20938646 20938712 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 13; exon_id "ENSE00003543591.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7879 chr22 HAVANA CDS 20938646 20938712 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 13; exon_id "ENSE00003543591.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7880 chr22 HAVANA exon 20939142 20939302 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 14; exon_id "ENSE00003630542.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7881 chr22 HAVANA CDS 20939142 20939302 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 14; exon_id "ENSE00003630542.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7882 chr22 HAVANA exon 20939388 20939554 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 15; exon_id "ENSE00003550695.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7883 chr22 HAVANA CDS 20939388 20939554 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 15; exon_id "ENSE00003550695.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7884 chr22 HAVANA exon 20940015 20940113 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 16; exon_id "ENSE00003479224.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7885 chr22 HAVANA CDS 20940015 20940113 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 16; exon_id "ENSE00003479224.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7886 chr22 HAVANA exon 20940855 20941122 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 17; exon_id "ENSE00002204633.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7887 chr22 HAVANA CDS 20940855 20940988 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 17; exon_id "ENSE00002204633.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7888 chr22 HAVANA stop_codon 20940989 20940991 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; exon_number 17; exon_id "ENSE00002204633.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7889 chr22 HAVANA UTR 20862339 20862731 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7890 chr22 HAVANA UTR 20891404 20891413 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7891 chr22 HAVANA UTR 20940989 20941122 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000541476.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MED15-202"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7892 chr22 HAVANA transcript 20862344 20891470 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000438962.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-014"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320313.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7893 chr22 HAVANA exon 20862344 20862731 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000438962.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-014"; exon_number 1; exon_id "ENSE00001658443.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320313.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7894 chr22 HAVANA CDS 20862560 20862731 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000438962.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-014"; exon_number 1; exon_id "ENSE00001658443.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320313.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7895 chr22 HAVANA start_codon 20862560 20862562 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000438962.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-014"; exon_number 1; exon_id "ENSE00001658443.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320313.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7896 chr22 HAVANA exon 20873165 20873282 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000438962.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-014"; exon_number 2; exon_id "ENSE00003598561.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320313.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7897 chr22 HAVANA CDS 20873165 20873282 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000438962.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-014"; exon_number 2; exon_id "ENSE00003598561.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320313.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7898 chr22 HAVANA exon 20891404 20891470 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000438962.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-014"; exon_number 3; exon_id "ENSE00001786264.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320313.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7899 chr22 HAVANA CDS 20891404 20891470 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000438962.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-014"; exon_number 3; exon_id "ENSE00001786264.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320313.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7900 chr22 HAVANA UTR 20862344 20862559 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000438962.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-014"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320313.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7901 chr22 HAVANA transcript 20877930 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-016"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320315.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7902 chr22 HAVANA exon 20877930 20878142 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-016"; exon_number 1; exon_id "ENSE00001674556.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320315.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7903 chr22 HAVANA exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-016"; exon_number 2; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320315.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7904 chr22 HAVANA CDS 20891414 20891491 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000445189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-016"; exon_number 2; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320315.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7905 chr22 HAVANA start_codon 20891414 20891416 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000445189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-016"; exon_number 2; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320315.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7906 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-016"; exon_number 3; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320315.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7907 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000445189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-016"; exon_number 3; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320315.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7908 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-016"; exon_number 4; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320315.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7909 chr22 HAVANA CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000445189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-016"; exon_number 4; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320315.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7910 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-016"; exon_number 5; exon_id "ENSE00003667421.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320315.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7911 chr22 HAVANA CDS 20909223 20909435 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000445189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-016"; exon_number 5; exon_id "ENSE00003667421.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320315.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7912 chr22 HAVANA UTR 20877930 20878142 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-016"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320315.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7913 chr22 HAVANA UTR 20891404 20891413 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000445189.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-016"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320315.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7914 chr22 HAVANA transcript 20878562 20909378 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000451058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-017"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320316.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7915 chr22 HAVANA exon 20878562 20878653 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000451058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-017"; exon_number 1; exon_id "ENSE00001600883.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320316.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7916 chr22 HAVANA exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000451058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-017"; exon_number 2; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320316.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7917 chr22 HAVANA CDS 20891414 20891491 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000451058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-017"; exon_number 2; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320316.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7918 chr22 HAVANA start_codon 20891414 20891416 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000451058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-017"; exon_number 2; exon_id "ENSE00003564180.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320316.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7919 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000451058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-017"; exon_number 3; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320316.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7920 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000451058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-017"; exon_number 3; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320316.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7921 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000451058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-017"; exon_number 4; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320316.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7922 chr22 HAVANA CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000451058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-017"; exon_number 4; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320316.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7923 chr22 HAVANA exon 20909223 20909378 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000451058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-017"; exon_number 5; exon_id "ENSE00001630169.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320316.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7924 chr22 HAVANA CDS 20909223 20909378 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000451058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-017"; exon_number 5; exon_id "ENSE00001630169.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320316.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7925 chr22 HAVANA UTR 20878562 20878653 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000451058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-017"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320316.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7926 chr22 HAVANA UTR 20891404 20891413 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000451058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-017"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320316.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7927 chr22 HAVANA transcript 20878574 20918911 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-018"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320317.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7928 chr22 HAVANA exon 20878574 20878653 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-018"; exon_number 1; exon_id "ENSE00001843268.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320317.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7929 chr22 HAVANA exon 20891404 20891491 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-018"; exon_number 2; exon_id "ENSE00003571275.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320317.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7930 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-018"; exon_number 3; exon_id "ENSE00003640727.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320317.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7931 chr22 HAVANA exon 20918737 20918911 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-018"; exon_number 4; exon_id "ENSE00001854633.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320317.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7932 chr22 HAVANA transcript 20905274 20918884 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000457322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-020"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320319.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7933 chr22 HAVANA exon 20905274 20905453 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000457322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-020"; exon_number 1; exon_id "ENSE00001670613.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320319.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7934 chr22 HAVANA CDS 20905415 20905453 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000457322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-020"; exon_number 1; exon_id "ENSE00001670613.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320319.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7935 chr22 HAVANA start_codon 20905415 20905417 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000457322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-020"; exon_number 1; exon_id "ENSE00001670613.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320319.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7936 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000457322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-020"; exon_number 2; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320319.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7937 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000457322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-020"; exon_number 2; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320319.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7938 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000457322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-020"; exon_number 3; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320319.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7939 chr22 HAVANA CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000457322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-020"; exon_number 3; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320319.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7940 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000457322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-020"; exon_number 4; exon_id "ENSE00003646427.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320319.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7941 chr22 HAVANA CDS 20909223 20909435 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000457322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-020"; exon_number 4; exon_id "ENSE00003646427.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320319.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7942 chr22 HAVANA exon 20918737 20918884 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000457322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-020"; exon_number 5; exon_id "ENSE00001667573.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320319.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7943 chr22 HAVANA CDS 20918737 20918884 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000457322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-020"; exon_number 5; exon_id "ENSE00001667573.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320319.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7944 chr22 HAVANA UTR 20905274 20905414 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000457322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-020"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320319.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7945 chr22 HAVANA transcript 20905294 20918885 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000428629.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-021"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320341.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7946 chr22 HAVANA exon 20905294 20905634 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000428629.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-021"; exon_number 1; exon_id "ENSE00001695879.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320341.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7947 chr22 HAVANA CDS 20905620 20905634 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000428629.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-021"; exon_number 1; exon_id "ENSE00001695879.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320341.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7948 chr22 HAVANA start_codon 20905620 20905622 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000428629.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-021"; exon_number 1; exon_id "ENSE00001695879.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320341.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7949 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000428629.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-021"; exon_number 2; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320341.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7950 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000428629.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-021"; exon_number 2; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320341.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7951 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000428629.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-021"; exon_number 3; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320341.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7952 chr22 HAVANA CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000428629.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-021"; exon_number 3; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320341.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7953 chr22 HAVANA exon 20918737 20918885 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000428629.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-021"; exon_number 4; exon_id "ENSE00001613436.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320341.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7954 chr22 HAVANA CDS 20918737 20918885 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000428629.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-021"; exon_number 4; exon_id "ENSE00001613436.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320341.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7955 chr22 HAVANA UTR 20905294 20905619 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000428629.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-021"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320341.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7956 chr22 HAVANA transcript 20905528 20918923 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000424287.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-022"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320342.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7957 chr22 HAVANA exon 20905528 20905634 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000424287.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-022"; exon_number 1; exon_id "ENSE00001622339.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320342.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7958 chr22 HAVANA CDS 20905620 20905634 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000424287.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-022"; exon_number 1; exon_id "ENSE00001622339.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320342.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7959 chr22 HAVANA start_codon 20905620 20905622 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000424287.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-022"; exon_number 1; exon_id "ENSE00001622339.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320342.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7960 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000424287.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-022"; exon_number 2; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320342.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7961 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000424287.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-022"; exon_number 2; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320342.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7962 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000424287.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-022"; exon_number 3; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320342.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7963 chr22 HAVANA CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000424287.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-022"; exon_number 3; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320342.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7964 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000424287.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-022"; exon_number 4; exon_id "ENSE00003646427.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320342.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7965 chr22 HAVANA CDS 20909223 20909435 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000424287.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-022"; exon_number 4; exon_id "ENSE00003646427.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320342.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7966 chr22 HAVANA exon 20918737 20918923 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000424287.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-022"; exon_number 5; exon_id "ENSE00001627743.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320342.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7967 chr22 HAVANA CDS 20918737 20918923 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000424287.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-022"; exon_number 5; exon_id "ENSE00001627743.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320342.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7968 chr22 HAVANA UTR 20905528 20905619 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000424287.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MED15-022"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320342.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7969 chr22 HAVANA transcript 20905577 20920823 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7970 chr22 HAVANA exon 20905577 20905634 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; exon_number 1; exon_id "ENSE00001643739.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7971 chr22 HAVANA CDS 20905577 20905634 . + 1 gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; exon_number 1; exon_id "ENSE00001643739.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7972 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; exon_number 2; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7973 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; exon_number 2; exon_id "ENSE00003656976.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7974 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; exon_number 3; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7975 chr22 HAVANA CDS 20907432 20907461 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; exon_number 3; exon_id "ENSE00003670601.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7976 chr22 HAVANA exon 20909223 20909282 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; exon_number 4; exon_id "ENSE00001694960.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7977 chr22 HAVANA CDS 20909223 20909282 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; exon_number 4; exon_id "ENSE00001694960.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7978 chr22 HAVANA exon 20909364 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; exon_number 5; exon_id "ENSE00001629311.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7979 chr22 HAVANA CDS 20909364 20909435 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; exon_number 5; exon_id "ENSE00001629311.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7980 chr22 HAVANA exon 20918737 20918975 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; exon_number 6; exon_id "ENSE00003544921.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7981 chr22 HAVANA CDS 20918737 20918975 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; exon_number 6; exon_id "ENSE00003544921.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7982 chr22 HAVANA exon 20920754 20920823 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; exon_number 7; exon_id "ENSE00001718773.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7983 chr22 HAVANA CDS 20920754 20920823 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000423862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "MED15-023"; exon_number 7; exon_id "ENSE00001718773.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320372.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7984 chr22 HAVANA transcript 20905600 20909364 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7985 chr22 HAVANA exon 20905600 20905634 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; exon_number 1; exon_id "ENSE00001720822.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7986 chr22 HAVANA CDS 20905620 20905634 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; exon_number 1; exon_id "ENSE00001720822.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7987 chr22 HAVANA start_codon 20905620 20905622 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; exon_number 1; exon_id "ENSE00001720822.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7988 chr22 HAVANA exon 20905723 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; exon_number 2; exon_id "ENSE00003656976.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7989 chr22 HAVANA CDS 20905723 20905774 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; exon_number 2; exon_id "ENSE00003656976.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7990 chr22 HAVANA exon 20906826 20906996 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; exon_number 3; exon_id "ENSE00001756102.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7991 chr22 HAVANA CDS 20906826 20906866 . + 2 gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; exon_number 3; exon_id "ENSE00001756102.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7992 chr22 HAVANA stop_codon 20906867 20906869 . + 0 gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; exon_number 3; exon_id "ENSE00001756102.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7993 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; exon_number 4; exon_id "ENSE00003501969.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7994 chr22 HAVANA exon 20909223 20909364 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; exon_number 5; exon_id "ENSE00001721983.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7995 chr22 HAVANA UTR 20905600 20905619 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7996 chr22 HAVANA UTR 20906867 20906996 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7997 chr22 HAVANA UTR 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7998 chr22 HAVANA UTR 20909223 20909364 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000420849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MED15-024"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320373.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
7999 chr22 HAVANA transcript 20905694 20920777 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000487550.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-025"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8000 chr22 HAVANA exon 20905694 20905774 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000487550.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-025"; exon_number 1; exon_id "ENSE00001883512.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8001 chr22 HAVANA exon 20907432 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000487550.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-025"; exon_number 2; exon_id "ENSE00003501969.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8002 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000487550.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-025"; exon_number 3; exon_id "ENSE00003640727.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8003 chr22 HAVANA exon 20918737 20918975 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000487550.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-025"; exon_number 4; exon_id "ENSE00003618357.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8004 chr22 HAVANA exon 20920754 20920777 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000487550.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-025"; exon_number 5; exon_id "ENSE00001903583.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8005 chr22 HAVANA transcript 20907384 20920813 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000476767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-027"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320376.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8006 chr22 HAVANA exon 20907384 20907461 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000476767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-027"; exon_number 1; exon_id "ENSE00001919950.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320376.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8007 chr22 HAVANA exon 20909223 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000476767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-027"; exon_number 2; exon_id "ENSE00003640727.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320376.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8008 chr22 HAVANA exon 20918737 20918975 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000476767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-027"; exon_number 3; exon_id "ENSE00003618357.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320376.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8009 chr22 HAVANA exon 20920754 20920813 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000476767.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-027"; exon_number 4; exon_id "ENSE00001868218.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320376.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8010 chr22 HAVANA transcript 20908526 20941904 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000492381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-007"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8011 chr22 HAVANA exon 20908526 20909435 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000492381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-007"; exon_number 1; exon_id "ENSE00001897715.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8012 chr22 HAVANA exon 20918737 20918975 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000492381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-007"; exon_number 2; exon_id "ENSE00003618357.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8013 chr22 HAVANA exon 20920754 20921104 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000492381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-007"; exon_number 3; exon_id "ENSE00003621492.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8014 chr22 HAVANA exon 20922808 20922918 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000492381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-007"; exon_number 4; exon_id "ENSE00003482544.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8015 chr22 HAVANA exon 20936898 20937034 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000492381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-007"; exon_number 5; exon_id "ENSE00003601574.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8016 chr22 HAVANA exon 20937127 20937254 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000492381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-007"; exon_number 6; exon_id "ENSE00003538199.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8017 chr22 HAVANA exon 20937400 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000492381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-007"; exon_number 7; exon_id "ENSE00003471122.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8018 chr22 HAVANA exon 20937617 20937680 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000492381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-007"; exon_number 8; exon_id "ENSE00003646756.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8019 chr22 HAVANA exon 20938646 20938712 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000492381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-007"; exon_number 9; exon_id "ENSE00003572924.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8020 chr22 HAVANA exon 20939142 20939302 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000492381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-007"; exon_number 10; exon_id "ENSE00003579334.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8021 chr22 HAVANA exon 20939388 20939554 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000492381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-007"; exon_number 11; exon_id "ENSE00003556581.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8022 chr22 HAVANA exon 20940015 20940113 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000492381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-007"; exon_number 12; exon_id "ENSE00003526321.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8023 chr22 HAVANA exon 20940855 20941904 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000492381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-007"; exon_number 13; exon_id "ENSE00003596950.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8024 chr22 HAVANA transcript 20920752 20937514 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000478831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-028"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320377.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8025 chr22 HAVANA exon 20920752 20921104 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000478831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-028"; exon_number 1; exon_id "ENSE00001943608.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320377.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8026 chr22 HAVANA exon 20922808 20922918 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000478831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-028"; exon_number 2; exon_id "ENSE00003482544.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320377.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8027 chr22 HAVANA exon 20937127 20937254 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000478831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-028"; exon_number 3; exon_id "ENSE00003538199.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320377.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8028 chr22 HAVANA exon 20937400 20937514 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000478831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MED15-028"; exon_number 4; exon_id "ENSE00001914124.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320377.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8029 chr22 HAVANA transcript 20927965 20941904 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000489651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-008"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8030 chr22 HAVANA exon 20927965 20929519 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000489651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-008"; exon_number 1; exon_id "ENSE00001894347.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8031 chr22 HAVANA exon 20936898 20937034 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000489651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-008"; exon_number 2; exon_id "ENSE00003601574.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8032 chr22 HAVANA exon 20937127 20937254 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000489651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-008"; exon_number 3; exon_id "ENSE00003538199.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8033 chr22 HAVANA exon 20937400 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000489651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-008"; exon_number 4; exon_id "ENSE00003471122.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8034 chr22 HAVANA exon 20937617 20937680 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000489651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-008"; exon_number 5; exon_id "ENSE00003646756.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8035 chr22 HAVANA exon 20938646 20938712 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000489651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-008"; exon_number 6; exon_id "ENSE00003572924.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8036 chr22 HAVANA exon 20939142 20939302 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000489651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-008"; exon_number 7; exon_id "ENSE00003579334.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8037 chr22 HAVANA exon 20939388 20939554 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000489651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-008"; exon_number 8; exon_id "ENSE00003556581.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8038 chr22 HAVANA exon 20940015 20940113 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000489651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-008"; exon_number 9; exon_id "ENSE00003526321.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8039 chr22 HAVANA exon 20940855 20941904 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000489651.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-008"; exon_number 10; exon_id "ENSE00003596950.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8040 chr22 HAVANA transcript 20936188 20941919 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473244.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-033"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000322219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8041 chr22 HAVANA exon 20936188 20937034 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473244.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-033"; exon_number 1; exon_id "ENSE00001955343.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000322219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8042 chr22 HAVANA exon 20937127 20937254 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473244.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-033"; exon_number 2; exon_id "ENSE00003538199.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000322219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8043 chr22 HAVANA exon 20937400 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473244.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-033"; exon_number 3; exon_id "ENSE00003471122.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000322219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8044 chr22 HAVANA exon 20937617 20937680 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473244.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-033"; exon_number 4; exon_id "ENSE00003646756.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000322219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8045 chr22 HAVANA exon 20938646 20938712 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473244.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-033"; exon_number 5; exon_id "ENSE00003572924.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000322219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8046 chr22 HAVANA exon 20939142 20939302 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473244.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-033"; exon_number 6; exon_id "ENSE00003579334.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000322219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8047 chr22 HAVANA exon 20939388 20939554 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473244.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-033"; exon_number 7; exon_id "ENSE00003556581.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000322219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8048 chr22 HAVANA exon 20940015 20940113 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473244.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-033"; exon_number 8; exon_id "ENSE00003526321.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000322219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8049 chr22 HAVANA exon 20940855 20941919 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000473244.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-033"; exon_number 9; exon_id "ENSE00003656126.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000322219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8050 chr22 HAVANA transcript 20936381 20941904 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000493216.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-032"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000322218.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8051 chr22 HAVANA exon 20936381 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000493216.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-032"; exon_number 1; exon_id "ENSE00001925893.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000322218.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8052 chr22 HAVANA exon 20937617 20940113 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000493216.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-032"; exon_number 2; exon_id "ENSE00001635734.2"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000322218.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8053 chr22 HAVANA exon 20940855 20941904 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000493216.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-032"; exon_number 3; exon_id "ENSE00003596950.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000322218.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8054 chr22 HAVANA transcript 20937217 20938036 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000476187.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-029"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320378.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8055 chr22 HAVANA exon 20937217 20937254 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000476187.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-029"; exon_number 1; exon_id "ENSE00001906563.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320378.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8056 chr22 HAVANA exon 20937400 20937534 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000476187.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-029"; exon_number 2; exon_id "ENSE00003471122.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320378.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8057 chr22 HAVANA exon 20937617 20938036 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000476187.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-029"; exon_number 3; exon_id "ENSE00001843181.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320378.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8058 chr22 HAVANA transcript 20937625 20940090 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000461076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-030"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320379.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8059 chr22 HAVANA exon 20937625 20937680 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000461076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-030"; exon_number 1; exon_id "ENSE00001890322.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320379.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8060 chr22 HAVANA exon 20938646 20938712 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000461076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-030"; exon_number 2; exon_id "ENSE00003572924.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320379.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8061 chr22 HAVANA exon 20939388 20940090 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000461076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-030"; exon_number 3; exon_id "ENSE00001854053.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320379.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8062 chr22 HAVANA transcript 20939233 20939710 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000436496.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-031"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320380.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8063 chr22 HAVANA exon 20939233 20939302 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000436496.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-031"; exon_number 1; exon_id "ENSE00001845754.1"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320380.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8064 chr22 HAVANA exon 20939388 20939710 . + . gene_id "ENSG00000099917.13"; transcript_id "ENST00000436496.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MED15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MED15-031"; exon_number 2; exon_id "ENSE00001750598.2"; level 2; havana_gene "OTTHUMG00000150810.8"; havana_transcript "OTTHUMT00000320380.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8065 chr22 HAVANA gene 20876357 20878157 . - . gene_id "ENSG00000236003.1"; transcript_id "ENSG00000236003.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC007050.17"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AC007050.17"; level 1; havana_gene "OTTHUMG00000150842.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8066 chr22 HAVANA transcript 20876357 20878157 . - . gene_id "ENSG00000236003.1"; transcript_id "ENST00000420225.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC007050.17"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC007050.17-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150842.1"; havana_transcript "OTTHUMT00000320308.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8067 chr22 HAVANA exon 20877940 20878157 . - . gene_id "ENSG00000236003.1"; transcript_id "ENST00000420225.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC007050.17"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC007050.17-001"; exon_number 1; exon_id "ENSE00001624662.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150842.1"; havana_transcript "OTTHUMT00000320308.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8068 chr22 HAVANA exon 20877018 20877313 . - . gene_id "ENSG00000236003.1"; transcript_id "ENST00000420225.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC007050.17"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC007050.17-001"; exon_number 2; exon_id "ENSE00001794144.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150842.1"; havana_transcript "OTTHUMT00000320308.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8069 chr22 HAVANA exon 20876357 20876494 . - . gene_id "ENSG00000236003.1"; transcript_id "ENST00000420225.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC007050.17"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC007050.17-001"; exon_number 3; exon_id "ENSE00001764487.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150842.1"; havana_transcript "OTTHUMT00000320308.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8070 chr22 HAVANA gene 20941783 20946505 . - . gene_id "ENSG00000250261.1"; transcript_id "ENSG00000250261.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007050.18"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AC007050.18"; level 2; havana_gene "OTTHUMG00000150880.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8071 chr22 HAVANA transcript 20941783 20946505 . - . gene_id "ENSG00000250261.1"; transcript_id "ENST00000508880.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007050.18"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC007050.18-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150880.1"; havana_transcript "OTTHUMT00000320413.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8072 chr22 HAVANA exon 20946243 20946505 . - . gene_id "ENSG00000250261.1"; transcript_id "ENST00000508880.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007050.18"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC007050.18-001"; exon_number 1; exon_id "ENSE00002085349.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150880.1"; havana_transcript "OTTHUMT00000320413.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8073 chr22 HAVANA exon 20945166 20945193 . - . gene_id "ENSG00000250261.1"; transcript_id "ENST00000508880.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007050.18"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC007050.18-001"; exon_number 2; exon_id "ENSE00001635878.2"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150880.1"; havana_transcript "OTTHUMT00000320413.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8074 chr22 HAVANA exon 20944118 20944296 . - . gene_id "ENSG00000250261.1"; transcript_id "ENST00000508880.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007050.18"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC007050.18-001"; exon_number 3; exon_id "ENSE00002060451.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150880.1"; havana_transcript "OTTHUMT00000320413.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8075 chr22 HAVANA exon 20943094 20943313 . - . gene_id "ENSG00000250261.1"; transcript_id "ENST00000508880.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007050.18"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC007050.18-001"; exon_number 4; exon_id "ENSE00002066173.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150880.1"; havana_transcript "OTTHUMT00000320413.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8076 chr22 HAVANA exon 20942116 20942297 . - . gene_id "ENSG00000250261.1"; transcript_id "ENST00000508880.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007050.18"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC007050.18-001"; exon_number 5; exon_id "ENSE00002039663.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150880.1"; havana_transcript "OTTHUMT00000320413.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8077 chr22 HAVANA exon 20941783 20942033 . - . gene_id "ENSG00000250261.1"; transcript_id "ENST00000508880.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC007050.18"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC007050.18-001"; exon_number 6; exon_id "ENSE00002052081.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150880.1"; havana_transcript "OTTHUMT00000320413.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8078 chr22 HAVANA gene 20956882 21011201 . - . gene_id "ENSG00000223553.1"; transcript_id "ENSG00000223553.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8079 chr22 HAVANA transcript 20956882 20980421 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8080 chr22 HAVANA exon 20980383 20980421 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 1; exon_id "ENSE00001676552.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8081 chr22 HAVANA exon 20978386 20978472 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 2; exon_id "ENSE00001686122.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8082 chr22 HAVANA exon 20976996 20977138 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 3; exon_id "ENSE00001785680.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8083 chr22 HAVANA exon 20976772 20976846 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 4; exon_id "ENSE00001728088.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8084 chr22 HAVANA exon 20975986 20976088 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 5; exon_id "ENSE00001596609.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8085 chr22 HAVANA exon 20975829 20975881 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 6; exon_id "ENSE00001616188.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8086 chr22 HAVANA exon 20975550 20975704 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 7; exon_id "ENSE00001698981.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8087 chr22 HAVANA exon 20970597 20970729 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 8; exon_id "ENSE00001776876.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8088 chr22 HAVANA exon 20967950 20968022 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 9; exon_id "ENSE00001791882.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8089 chr22 HAVANA exon 20964916 20965002 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 10; exon_id "ENSE00001594179.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8090 chr22 HAVANA exon 20961698 20961843 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 11; exon_id "ENSE00001776996.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8091 chr22 HAVANA exon 20961020 20961109 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 12; exon_id "ENSE00001653534.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8092 chr22 HAVANA exon 20960465 20960563 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 13; exon_id "ENSE00001803869.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8093 chr22 HAVANA exon 20959184 20959387 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 14; exon_id "ENSE00001737797.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8094 chr22 HAVANA exon 20958603 20958835 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 15; exon_id "ENSE00001673748.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8095 chr22 HAVANA exon 20958215 20958350 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 16; exon_id "ENSE00001665642.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8096 chr22 HAVANA exon 20957318 20957446 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 17; exon_id "ENSE00001705085.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8097 chr22 HAVANA exon 20956882 20957059 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000416717.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "SMPD4P1-001"; exon_number 18; exon_id "ENSE00001634886.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000075099.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8098 chr22 HAVANA transcript 20970517 21011201 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000443839.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMPD4P1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000319965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8099 chr22 HAVANA exon 21011151 21011201 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000443839.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMPD4P1-002"; exon_number 1; exon_id "ENSE00001618960.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000319965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8100 chr22 HAVANA exon 20992898 20993507 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000443839.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMPD4P1-002"; exon_number 2; exon_id "ENSE00001782772.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000319965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8101 chr22 HAVANA exon 20981450 20982100 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000443839.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMPD4P1-002"; exon_number 3; exon_id "ENSE00001639260.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000319965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8102 chr22 HAVANA exon 20980383 20980466 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000443839.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMPD4P1-002"; exon_number 4; exon_id "ENSE00001662478.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000319965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8103 chr22 HAVANA exon 20976996 20977138 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000443839.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMPD4P1-002"; exon_number 5; exon_id "ENSE00001785680.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000319965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8104 chr22 HAVANA exon 20976214 20976413 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000443839.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMPD4P1-002"; exon_number 6; exon_id "ENSE00001536713.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000319965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8105 chr22 HAVANA exon 20975986 20976088 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000443839.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMPD4P1-002"; exon_number 7; exon_id "ENSE00001596609.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000319965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8106 chr22 HAVANA exon 20975829 20975881 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000443839.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMPD4P1-002"; exon_number 8; exon_id "ENSE00001616188.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000319965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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8107 chr22 HAVANA exon 20970517 20970729 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000443839.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMPD4P1-002"; exon_number 9; exon_id "ENSE00001654877.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000319965.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8108 chr22 HAVANA transcript 20992648 20993422 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000433066.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMPD4P1-003"; level 2; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000319966.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8109 chr22 HAVANA exon 20993177 20993422 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000433066.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMPD4P1-003"; exon_number 1; exon_id "ENSE00001635286.1"; level 2; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000319966.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8110 chr22 HAVANA exon 20992898 20993063 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000433066.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMPD4P1-003"; exon_number 2; exon_id "ENSE00001615275.1"; level 2; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000319966.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8111 chr22 HAVANA exon 20992648 20992718 . - . gene_id "ENSG00000223553.1"; transcript_id "ENST00000433066.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SMPD4P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMPD4P1-003"; exon_number 3; exon_id "ENSE00001799696.1"; level 2; havana_gene "OTTHUMG00000030245.5"; havana_transcript "OTTHUMT00000319966.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8112 chr22 HAVANA gene 21007017 21009037 . + . gene_id "ENSG00000238125.1"; transcript_id "ENSG00000238125.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC9A3P2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "SLC9A3P2"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150753.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
8113 chr22 HAVANA transcript 21007017 21009037 . + . gene_id "ENSG00000238125.1"; transcript_id "ENST00000447821.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC9A3P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC9A3P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150753.1"; havana_transcript "OTTHUMT00000319959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8114 chr22 HAVANA exon 21007017 21009037 . + . gene_id "ENSG00000238125.1"; transcript_id "ENST00000447821.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC9A3P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC9A3P2-001"; exon_number 1; exon_id "ENSE00001668294.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150753.1"; havana_transcript "OTTHUMT00000319959.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8115 chr22 ENSEMBL gene 21011322 21011403 . + . gene_id "ENSG00000264718.1"; transcript_id "ENSG00000264718.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AC007050.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AC007050.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8116 chr22 ENSEMBL transcript 21011322 21011403 . + . gene_id "ENSG00000264718.1"; transcript_id "ENST00000582098.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AC007050.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AC007050.1-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8117 chr22 ENSEMBL exon 21011322 21011403 . + . gene_id "ENSG00000264718.1"; transcript_id "ENST00000582098.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AC007050.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AC007050.1-201"; exon_number 1; exon_id "ENSE00002690125.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8118 chr22 HAVANA gene 21022124 21025272 . - . gene_id "ENSG00000229107.2"; transcript_id "ENSG00000229107.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABHD17AP4"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "ABHD17AP4"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150752.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8119 chr22 HAVANA transcript 21022124 21025272 . - . gene_id "ENSG00000229107.2"; transcript_id "ENST00000411545.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABHD17AP4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ABHD17AP4-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150752.1"; havana_transcript "OTTHUMT00000319958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8120 chr22 HAVANA exon 21024749 21025272 . - . gene_id "ENSG00000229107.2"; transcript_id "ENST00000411545.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABHD17AP4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ABHD17AP4-001"; exon_number 1; exon_id "ENSE00001672775.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150752.1"; havana_transcript "OTTHUMT00000319958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8121 chr22 HAVANA exon 21022124 21022508 . - . gene_id "ENSG00000229107.2"; transcript_id "ENST00000411545.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABHD17AP4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ABHD17AP4-001"; exon_number 2; exon_id "ENSE00001906222.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150752.1"; havana_transcript "OTTHUMT00000319958.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8122 chr22 HAVANA gene 21044217 21053226 . + . gene_id "ENSG00000217261.4"; transcript_id "ENSG00000217261.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L4P"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L4P"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150756.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8123 chr22 HAVANA transcript 21044217 21053226 . + . gene_id "ENSG00000217261.4"; transcript_id "ENST00000427789.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L4P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L4P-001"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150756.2"; havana_transcript "OTTHUMT00000319964.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8124 chr22 HAVANA exon 21044217 21045712 . + . gene_id "ENSG00000217261.4"; transcript_id "ENST00000427789.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L4P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L4P-001"; exon_number 1; exon_id "ENSE00003473063.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150756.2"; havana_transcript "OTTHUMT00000319964.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8125 chr22 HAVANA exon 21049082 21049285 . + . gene_id "ENSG00000217261.4"; transcript_id "ENST00000427789.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L4P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L4P-001"; exon_number 2; exon_id "ENSE00003574931.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150756.2"; havana_transcript "OTTHUMT00000319964.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8126 chr22 HAVANA exon 21050323 21050385 . + . gene_id "ENSG00000217261.4"; transcript_id "ENST00000427789.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L4P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L4P-001"; exon_number 3; exon_id "ENSE00003562082.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150756.2"; havana_transcript "OTTHUMT00000319964.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8127 chr22 HAVANA exon 21051093 21051199 . + . gene_id "ENSG00000217261.4"; transcript_id "ENST00000427789.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L4P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L4P-001"; exon_number 4; exon_id "ENSE00003641014.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150756.2"; havana_transcript "OTTHUMT00000319964.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8128 chr22 HAVANA exon 21053206 21053226 . + . gene_id "ENSG00000217261.4"; transcript_id "ENST00000427789.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L4P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L4P-001"; exon_number 5; exon_id "ENSE00003543132.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150756.2"; havana_transcript "OTTHUMT00000319964.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8129 chr22 HAVANA transcript 21044319 21045605 . + . gene_id "ENSG00000217261.4"; transcript_id "ENST00000412250.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L4P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L4P-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150756.2"; havana_transcript "OTTHUMT00000468456.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8130 chr22 HAVANA exon 21044319 21045605 . + . gene_id "ENSG00000217261.4"; transcript_id "ENST00000412250.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L4P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L4P-002"; exon_number 1; exon_id "ENSE00003586803.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150756.2"; havana_transcript "OTTHUMT00000468456.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8131 chr22 HAVANA gene 21052250 21053222 . - . gene_id "ENSG00000235062.4"; transcript_id "ENSG00000235062.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP5"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP5"; level 2; havana_gene "OTTHUMG00000150757.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8132 chr22 HAVANA transcript 21052250 21053222 . - . gene_id "ENSG00000235062.4"; transcript_id "ENST00000514371.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP5-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150757.1"; havana_transcript "OTTHUMT00000319967.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8133 chr22 HAVANA exon 21053060 21053222 . - . gene_id "ENSG00000235062.4"; transcript_id "ENST00000514371.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP5-001"; exon_number 1; exon_id "ENSE00002063566.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150757.1"; havana_transcript "OTTHUMT00000319967.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8134 chr22 HAVANA exon 21052250 21052339 . - . gene_id "ENSG00000235062.4"; transcript_id "ENST00000514371.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP5-001"; exon_number 2; exon_id "ENSE00002083588.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150757.1"; havana_transcript "OTTHUMT00000319967.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8135 chr22 HAVANA gene 21055220 21058894 . + . gene_id "ENSG00000226287.3"; transcript_id "ENSG00000226287.3"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A"; level 2; havana_gene "OTTHUMG00000150164.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8136 chr22 ENSEMBL transcript 21055220 21055955 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000359859.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-201"; level 3; havana_gene "OTTHUMG00000150164.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8137 chr22 ENSEMBL exon 21055220 21055955 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000359859.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-201"; exon_number 1; exon_id "ENSE00002225385.1"; level 3; havana_gene "OTTHUMG00000150164.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8138 chr22 HAVANA transcript 21055402 21058894 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000450925.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8139 chr22 HAVANA exon 21055402 21056594 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000450925.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-001"; exon_number 1; exon_id "ENSE00001631462.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8140 chr22 HAVANA exon 21056874 21056997 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000450925.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-001"; exon_number 2; exon_id "ENSE00001649325.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8141 chr22 HAVANA exon 21057294 21057410 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000450925.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-001"; exon_number 3; exon_id "ENSE00001781278.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8142 chr22 HAVANA exon 21057756 21057812 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000450925.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-001"; exon_number 4; exon_id "ENSE00001641633.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8143 chr22 HAVANA exon 21057921 21057980 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000450925.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-001"; exon_number 5; exon_id "ENSE00001678748.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8144 chr22 HAVANA exon 21058256 21058328 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000450925.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-001"; exon_number 6; exon_id "ENSE00001679851.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8145 chr22 HAVANA exon 21058476 21058516 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000450925.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-001"; exon_number 7; exon_id "ENSE00001762770.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8146 chr22 HAVANA exon 21058599 21058894 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000450925.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-001"; exon_number 8; exon_id "ENSE00001645121.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8147 chr22 HAVANA transcript 21056600 21058628 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000436618.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-002"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8148 chr22 HAVANA exon 21056600 21056748 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000436618.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-002"; exon_number 1; exon_id "ENSE00001692063.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8149 chr22 HAVANA exon 21056874 21056997 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000436618.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-002"; exon_number 2; exon_id "ENSE00001649325.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8150 chr22 HAVANA exon 21057294 21057410 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000436618.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-002"; exon_number 3; exon_id "ENSE00001781278.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8151 chr22 HAVANA exon 21057756 21057812 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000436618.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-002"; exon_number 4; exon_id "ENSE00001641633.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8152 chr22 HAVANA exon 21057921 21058328 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000436618.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-002"; exon_number 5; exon_id "ENSE00001744389.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8153 chr22 HAVANA exon 21058476 21058516 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000436618.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-002"; exon_number 6; exon_id "ENSE00001762770.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8154 chr22 HAVANA exon 21058599 21058628 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000436618.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-002"; exon_number 7; exon_id "ENSE00001611247.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316650.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8155 chr22 HAVANA transcript 21056965 21058890 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000442222.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-010"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000319963.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8156 chr22 HAVANA exon 21056965 21056997 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000442222.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-010"; exon_number 1; exon_id "ENSE00001741393.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000319963.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8157 chr22 HAVANA exon 21057118 21057181 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000442222.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-010"; exon_number 2; exon_id "ENSE00001615873.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000319963.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8158 chr22 HAVANA exon 21057294 21057410 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000442222.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-010"; exon_number 3; exon_id "ENSE00001781278.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000319963.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8159 chr22 HAVANA exon 21057756 21057812 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000442222.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-010"; exon_number 4; exon_id "ENSE00001641633.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000319963.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8160 chr22 HAVANA exon 21057921 21057980 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000442222.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-010"; exon_number 5; exon_id "ENSE00001678748.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000319963.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8161 chr22 HAVANA exon 21058256 21058328 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000442222.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-010"; exon_number 6; exon_id "ENSE00001679851.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000319963.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8162 chr22 HAVANA exon 21058476 21058516 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000442222.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-010"; exon_number 7; exon_id "ENSE00001762770.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000319963.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8163 chr22 HAVANA exon 21058599 21058890 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000442222.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-010"; exon_number 8; exon_id "ENSE00001788859.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000319963.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8164 chr22 HAVANA transcript 21057129 21058793 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000445836.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-003"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316651.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8165 chr22 HAVANA exon 21057129 21057181 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000445836.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-003"; exon_number 1; exon_id "ENSE00001623124.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316651.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8166 chr22 HAVANA exon 21057294 21057410 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000445836.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-003"; exon_number 2; exon_id "ENSE00001781278.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316651.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8167 chr22 HAVANA exon 21057756 21057812 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000445836.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-003"; exon_number 3; exon_id "ENSE00001641633.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316651.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8168 chr22 HAVANA exon 21057921 21058039 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000445836.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-003"; exon_number 4; exon_id "ENSE00001712385.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316651.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8169 chr22 HAVANA exon 21058256 21058344 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000445836.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-003"; exon_number 5; exon_id "ENSE00001678833.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316651.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8170 chr22 HAVANA exon 21058476 21058516 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000445836.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-003"; exon_number 6; exon_id "ENSE00001762770.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316651.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8171 chr22 HAVANA exon 21058599 21058793 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000445836.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-003"; exon_number 7; exon_id "ENSE00001754529.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316651.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8172 chr22 HAVANA transcript 21057209 21058894 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000452055.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-004"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8173 chr22 HAVANA exon 21057209 21057410 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000452055.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-004"; exon_number 1; exon_id "ENSE00001706912.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8174 chr22 HAVANA exon 21057756 21057812 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000452055.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-004"; exon_number 2; exon_id "ENSE00001641633.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8175 chr22 HAVANA exon 21057921 21058039 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000452055.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-004"; exon_number 3; exon_id "ENSE00001712385.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8176 chr22 HAVANA exon 21058256 21058328 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000452055.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-004"; exon_number 4; exon_id "ENSE00001679851.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8177 chr22 HAVANA exon 21058476 21058516 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000452055.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-004"; exon_number 5; exon_id "ENSE00001762770.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8178 chr22 HAVANA exon 21058599 21058894 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000452055.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-004"; exon_number 6; exon_id "ENSE00001645121.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8179 chr22 HAVANA transcript 21057261 21058542 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000414022.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-007"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8180 chr22 HAVANA exon 21057261 21057410 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000414022.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-007"; exon_number 1; exon_id "ENSE00001693435.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8181 chr22 HAVANA exon 21057756 21057812 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000414022.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-007"; exon_number 2; exon_id "ENSE00001641633.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8182 chr22 HAVANA exon 21057921 21058039 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000414022.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-007"; exon_number 3; exon_id "ENSE00001712385.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8183 chr22 HAVANA exon 21058256 21058328 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000414022.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-007"; exon_number 4; exon_id "ENSE00001679851.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8184 chr22 HAVANA exon 21058476 21058542 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000414022.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-007"; exon_number 5; exon_id "ENSE00001698010.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316655.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8185 chr22 HAVANA transcript 21057263 21058407 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000454833.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-005"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316653.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8186 chr22 HAVANA exon 21057263 21057410 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000454833.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-005"; exon_number 1; exon_id "ENSE00001789947.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316653.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8187 chr22 HAVANA exon 21057921 21058039 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000454833.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-005"; exon_number 2; exon_id "ENSE00001712385.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316653.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8188 chr22 HAVANA exon 21058256 21058407 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000454833.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-005"; exon_number 3; exon_id "ENSE00001597376.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316653.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8189 chr22 HAVANA transcript 21057340 21058894 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000419950.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-006"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8190 chr22 HAVANA exon 21057340 21057410 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000419950.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-006"; exon_number 1; exon_id "ENSE00001673319.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8191 chr22 HAVANA exon 21057756 21057812 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000419950.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-006"; exon_number 2; exon_id "ENSE00001641633.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8192 chr22 HAVANA exon 21057921 21057980 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000419950.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-006"; exon_number 3; exon_id "ENSE00001678748.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8193 chr22 HAVANA exon 21058107 21058171 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000419950.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-006"; exon_number 4; exon_id "ENSE00001763973.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8194 chr22 HAVANA exon 21058256 21058328 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000419950.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-006"; exon_number 5; exon_id "ENSE00001679851.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8195 chr22 HAVANA exon 21058476 21058516 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000419950.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-006"; exon_number 6; exon_id "ENSE00001762770.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8196 chr22 HAVANA exon 21058599 21058894 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000419950.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM191A-006"; exon_number 7; exon_id "ENSE00001645121.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8197 chr22 HAVANA transcript 21057383 21058522 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000422715.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-008"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8198 chr22 HAVANA exon 21057383 21057410 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000422715.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-008"; exon_number 1; exon_id "ENSE00001612304.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8199 chr22 HAVANA exon 21057756 21057812 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000422715.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-008"; exon_number 2; exon_id "ENSE00001641633.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8200 chr22 HAVANA exon 21057921 21058039 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000422715.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-008"; exon_number 3; exon_id "ENSE00001712385.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8201 chr22 HAVANA exon 21058256 21058522 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000422715.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-008"; exon_number 4; exon_id "ENSE00001770768.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8202 chr22 HAVANA transcript 21058004 21058846 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000428752.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-009"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316657.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8203 chr22 HAVANA exon 21058004 21058328 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000428752.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-009"; exon_number 1; exon_id "ENSE00001653245.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316657.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8204 chr22 HAVANA exon 21058476 21058516 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000428752.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-009"; exon_number 2; exon_id "ENSE00001762770.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316657.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8205 chr22 HAVANA exon 21058599 21058846 . + . gene_id "ENSG00000226287.3"; transcript_id "ENST00000428752.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "TMEM191A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191A-009"; exon_number 3; exon_id "ENSE00001684742.1"; level 2; havana_gene "OTTHUMG00000150164.2"; havana_transcript "OTTHUMT00000316657.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8206 chr22 HAVANA gene 21061979 21213705 . - . gene_id "ENSG00000241973.6"; transcript_id "ENSG00000241973.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA"; level 1; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8207 chr22 HAVANA transcript 21061979 21213100 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8208 chr22 HAVANA exon 21212858 21213100 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 1; exon_id "ENSE00003649653.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8209 chr22 HAVANA CDS 21212858 21213013 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 1; exon_id "ENSE00003649653.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8210 chr22 HAVANA start_codon 21213011 21213013 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 1; exon_id "ENSE00003649653.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8211 chr22 HAVANA exon 21192903 21193019 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 2; exon_id "ENSE00003583961.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8212 chr22 HAVANA CDS 21192903 21193019 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 2; exon_id "ENSE00003583961.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8213 chr22 HAVANA exon 21188850 21188943 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 3; exon_id "ENSE00003601267.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8214 chr22 HAVANA CDS 21188850 21188943 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 3; exon_id "ENSE00003601267.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8215 chr22 HAVANA exon 21178614 21178702 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 4; exon_id "ENSE00003606103.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8216 chr22 HAVANA CDS 21178614 21178702 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 4; exon_id "ENSE00003606103.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8217 chr22 HAVANA exon 21174827 21174899 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 5; exon_id "ENSE00003575792.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8218 chr22 HAVANA CDS 21174827 21174899 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 5; exon_id "ENSE00003575792.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8219 chr22 HAVANA exon 21173929 21174188 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 6; exon_id "ENSE00003474180.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8220 chr22 HAVANA CDS 21173929 21174188 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 6; exon_id "ENSE00003474180.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8221 chr22 HAVANA exon 21172771 21172837 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 7; exon_id "ENSE00003666817.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8222 chr22 HAVANA CDS 21172771 21172837 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 7; exon_id "ENSE00003666817.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8223 chr22 HAVANA exon 21167646 21167794 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 8; exon_id "ENSE00003549460.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8224 chr22 HAVANA CDS 21167646 21167794 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 8; exon_id "ENSE00003549460.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8225 chr22 HAVANA exon 21165255 21165320 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 9; exon_id "ENSE00003534742.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8226 chr22 HAVANA CDS 21165255 21165320 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 9; exon_id "ENSE00003534742.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8227 chr22 HAVANA exon 21161650 21161746 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 10; exon_id "ENSE00003547793.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8228 chr22 HAVANA CDS 21161650 21161746 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 10; exon_id "ENSE00003547793.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8229 chr22 HAVANA exon 21159262 21159453 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 11; exon_id "ENSE00003535601.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8230 chr22 HAVANA CDS 21159262 21159453 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 11; exon_id "ENSE00003535601.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8231 chr22 HAVANA exon 21158588 21158688 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 12; exon_id "ENSE00003515404.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8232 chr22 HAVANA CDS 21158588 21158688 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 12; exon_id "ENSE00003515404.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8233 chr22 HAVANA exon 21157479 21157608 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 13; exon_id "ENSE00003612620.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8234 chr22 HAVANA CDS 21157479 21157608 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 13; exon_id "ENSE00003612620.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8235 chr22 HAVANA exon 21156261 21156393 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 14; exon_id "ENSE00003604552.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8236 chr22 HAVANA CDS 21156261 21156393 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 14; exon_id "ENSE00003604552.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8237 chr22 HAVANA exon 21153959 21154054 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 15; exon_id "ENSE00003567417.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8238 chr22 HAVANA CDS 21153959 21154054 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 15; exon_id "ENSE00003567417.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8239 chr22 HAVANA exon 21153381 21153564 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 16; exon_id "ENSE00003564903.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8240 chr22 HAVANA CDS 21153381 21153564 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 16; exon_id "ENSE00003564903.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8241 chr22 HAVANA exon 21152872 21152975 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 17; exon_id "ENSE00001710190.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8242 chr22 HAVANA CDS 21152872 21152975 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 17; exon_id "ENSE00001710190.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8243 chr22 HAVANA exon 21150434 21150602 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 18; exon_id "ENSE00001792161.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8244 chr22 HAVANA CDS 21150434 21150602 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 18; exon_id "ENSE00001792161.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8245 chr22 HAVANA exon 21147481 21147531 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 19; exon_id "ENSE00003595697.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8246 chr22 HAVANA CDS 21147481 21147531 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 19; exon_id "ENSE00003595697.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8247 chr22 HAVANA exon 21119873 21119981 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 20; exon_id "ENSE00003466849.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8248 chr22 HAVANA CDS 21119873 21119981 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 20; exon_id "ENSE00003466849.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8249 chr22 HAVANA exon 21119388 21119524 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 21; exon_id "ENSE00003474947.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8250 chr22 HAVANA CDS 21119388 21119524 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 21; exon_id "ENSE00003474947.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8251 chr22 HAVANA exon 21119105 21119238 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 22; exon_id "ENSE00003684445.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8252 chr22 HAVANA CDS 21119105 21119238 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 22; exon_id "ENSE00003684445.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8253 chr22 HAVANA exon 21115592 21115674 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 23; exon_id "ENSE00003589088.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8254 chr22 HAVANA CDS 21115592 21115674 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 23; exon_id "ENSE00003589088.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8255 chr22 HAVANA exon 21107398 21107468 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 24; exon_id "ENSE00001654715.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8256 chr22 HAVANA CDS 21107398 21107468 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 24; exon_id "ENSE00001654715.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8257 chr22 HAVANA exon 21107191 21107315 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 25; exon_id "ENSE00001644702.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8258 chr22 HAVANA CDS 21107191 21107315 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 25; exon_id "ENSE00001644702.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8259 chr22 HAVANA exon 21105962 21106043 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 26; exon_id "ENSE00001636327.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8260 chr22 HAVANA CDS 21105962 21106043 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 26; exon_id "ENSE00001636327.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8261 chr22 HAVANA exon 21105581 21105664 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 27; exon_id "ENSE00003564578.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8262 chr22 HAVANA CDS 21105581 21105664 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 27; exon_id "ENSE00003564578.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8263 chr22 HAVANA exon 21104193 21104282 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 28; exon_id "ENSE00003641217.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8264 chr22 HAVANA CDS 21104193 21104282 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 28; exon_id "ENSE00003641217.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8265 chr22 HAVANA exon 21101871 21101990 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 29; exon_id "ENSE00001634710.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8266 chr22 HAVANA CDS 21101871 21101990 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 29; exon_id "ENSE00001634710.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8267 chr22 HAVANA exon 21098916 21099008 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 30; exon_id "ENSE00001620613.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8268 chr22 HAVANA CDS 21098916 21099008 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 30; exon_id "ENSE00001620613.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8269 chr22 HAVANA exon 21096896 21097052 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 31; exon_id "ENSE00001786226.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8270 chr22 HAVANA CDS 21096896 21097052 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 31; exon_id "ENSE00001786226.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8271 chr22 HAVANA exon 21096516 21096643 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 32; exon_id "ENSE00003568806.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8272 chr22 HAVANA CDS 21096516 21096643 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 32; exon_id "ENSE00003568806.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8273 chr22 HAVANA exon 21088683 21088841 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 33; exon_id "ENSE00001661705.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8274 chr22 HAVANA CDS 21088683 21088841 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 33; exon_id "ENSE00001661705.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8275 chr22 HAVANA exon 21088331 21088482 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 34; exon_id "ENSE00003678829.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8276 chr22 HAVANA CDS 21088331 21088482 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 34; exon_id "ENSE00003678829.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8277 chr22 HAVANA exon 21088024 21088131 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 35; exon_id "ENSE00003472717.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8278 chr22 HAVANA CDS 21088024 21088131 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 35; exon_id "ENSE00003472717.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8279 chr22 HAVANA exon 21087259 21087386 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 36; exon_id "ENSE00003550076.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8280 chr22 HAVANA CDS 21087259 21087386 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 36; exon_id "ENSE00003550076.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8281 chr22 HAVANA exon 21084180 21084299 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 37; exon_id "ENSE00003684671.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8282 chr22 HAVANA CDS 21084180 21084299 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 37; exon_id "ENSE00003684671.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8283 chr22 HAVANA exon 21083920 21083999 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 38; exon_id "ENSE00003551725.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8284 chr22 HAVANA CDS 21083920 21083999 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 38; exon_id "ENSE00003551725.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8285 chr22 HAVANA exon 21083601 21083794 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 39; exon_id "ENSE00003471014.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8286 chr22 HAVANA CDS 21083601 21083794 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 39; exon_id "ENSE00003471014.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8287 chr22 HAVANA exon 21082062 21082152 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 40; exon_id "ENSE00003488341.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8288 chr22 HAVANA CDS 21082062 21082152 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 40; exon_id "ENSE00003488341.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8289 chr22 HAVANA exon 21081518 21081685 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 41; exon_id "ENSE00003484938.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8290 chr22 HAVANA CDS 21081518 21081685 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 41; exon_id "ENSE00003484938.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8291 chr22 HAVANA exon 21080776 21080829 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 42; exon_id "ENSE00003502775.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8292 chr22 HAVANA CDS 21080776 21080829 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 42; exon_id "ENSE00003502775.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8293 chr22 HAVANA exon 21075586 21075706 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 43; exon_id "ENSE00003579791.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8294 chr22 HAVANA CDS 21075586 21075706 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 43; exon_id "ENSE00003579791.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8295 chr22 HAVANA exon 21072981 21073110 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 44; exon_id "ENSE00003562568.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8296 chr22 HAVANA CDS 21072981 21073110 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 44; exon_id "ENSE00003562568.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8297 chr22 HAVANA exon 21071996 21072066 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 45; exon_id "ENSE00003568190.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8298 chr22 HAVANA CDS 21071996 21072066 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 45; exon_id "ENSE00003568190.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8299 chr22 HAVANA exon 21068916 21068988 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 46; exon_id "ENSE00003523646.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8300 chr22 HAVANA CDS 21068916 21068988 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 46; exon_id "ENSE00003523646.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8301 chr22 HAVANA exon 21068746 21068816 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 47; exon_id "ENSE00003599476.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8302 chr22 HAVANA CDS 21068746 21068816 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 47; exon_id "ENSE00003599476.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8303 chr22 HAVANA exon 21067569 21067678 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 48; exon_id "ENSE00003604406.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8304 chr22 HAVANA CDS 21067569 21067678 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 48; exon_id "ENSE00003604406.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8305 chr22 HAVANA exon 21066981 21067085 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 49; exon_id "ENSE00003509500.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8306 chr22 HAVANA CDS 21066981 21067085 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 49; exon_id "ENSE00003509500.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8307 chr22 HAVANA exon 21066774 21066899 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 50; exon_id "ENSE00003560817.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8308 chr22 HAVANA CDS 21066774 21066899 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 50; exon_id "ENSE00003560817.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8309 chr22 HAVANA exon 21065629 21065749 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 51; exon_id "ENSE00003483612.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8310 chr22 HAVANA CDS 21065629 21065749 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 51; exon_id "ENSE00003483612.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8311 chr22 HAVANA exon 21064987 21065146 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 52; exon_id "ENSE00003467040.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8312 chr22 HAVANA CDS 21064987 21065146 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 52; exon_id "ENSE00003467040.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8313 chr22 HAVANA exon 21064196 21064285 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 53; exon_id "ENSE00003463977.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8314 chr22 HAVANA CDS 21064196 21064285 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 53; exon_id "ENSE00003463977.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8315 chr22 HAVANA exon 21063584 21063667 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 54; exon_id "ENSE00003520208.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8316 chr22 HAVANA CDS 21063584 21063667 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 54; exon_id "ENSE00003520208.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8317 chr22 HAVANA exon 21061979 21062386 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 55; exon_id "ENSE00001839790.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8318 chr22 HAVANA CDS 21062338 21062386 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 55; exon_id "ENSE00001839790.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8319 chr22 HAVANA stop_codon 21062335 21062337 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; exon_number 55; exon_id "ENSE00001839790.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8320 chr22 HAVANA UTR 21213014 21213100 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8321 chr22 HAVANA UTR 21061979 21062337 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000255882.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-001"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33603.2"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000075723.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8322 chr22 HAVANA transcript 21061981 21076297 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000492581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-005"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319943.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8323 chr22 HAVANA exon 21075586 21076297 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000492581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-005"; exon_number 1; exon_id "ENSE00001902443.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319943.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8324 chr22 HAVANA exon 21072981 21073110 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000492581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-005"; exon_number 2; exon_id "ENSE00003555567.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319943.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8325 chr22 HAVANA exon 21071996 21072066 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000492581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-005"; exon_number 3; exon_id "ENSE00003561787.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319943.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8326 chr22 HAVANA exon 21068916 21068988 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000492581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-005"; exon_number 4; exon_id "ENSE00003687412.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319943.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8327 chr22 HAVANA exon 21068746 21068816 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000492581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-005"; exon_number 5; exon_id "ENSE00003595764.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319943.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8328 chr22 HAVANA exon 21066981 21067678 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000492581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-005"; exon_number 6; exon_id "ENSE00001866026.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319943.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8329 chr22 HAVANA exon 21066774 21066899 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000492581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-005"; exon_number 7; exon_id "ENSE00003677348.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319943.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8330 chr22 HAVANA exon 21064196 21065749 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000492581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-005"; exon_number 8; exon_id "ENSE00001926442.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319943.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8331 chr22 HAVANA exon 21063584 21063667 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000492581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-005"; exon_number 9; exon_id "ENSE00003493202.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319943.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8332 chr22 HAVANA exon 21061981 21062386 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000492581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-005"; exon_number 10; exon_id "ENSE00003474890.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319943.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8333 chr22 ENSEMBL transcript 21061981 21213070 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8334 chr22 ENSEMBL exon 21212858 21213070 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 1; exon_id "ENSE00002665427.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8335 chr22 ENSEMBL exon 21192903 21193019 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 2; exon_id "ENSE00003571645.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8336 chr22 ENSEMBL CDS 21192903 21193001 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 2; exon_id "ENSE00003571645.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8337 chr22 ENSEMBL start_codon 21192999 21193001 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 2; exon_id "ENSE00003571645.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8338 chr22 ENSEMBL exon 21188850 21188943 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 3; exon_id "ENSE00003601267.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8339 chr22 ENSEMBL CDS 21188850 21188943 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 3; exon_id "ENSE00003601267.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8340 chr22 ENSEMBL exon 21178614 21178702 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 4; exon_id "ENSE00003606103.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8341 chr22 ENSEMBL CDS 21178614 21178702 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 4; exon_id "ENSE00003606103.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8342 chr22 ENSEMBL exon 21174827 21174899 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 5; exon_id "ENSE00003575792.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8343 chr22 ENSEMBL CDS 21174827 21174899 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 5; exon_id "ENSE00003575792.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8344 chr22 ENSEMBL exon 21173929 21174188 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 6; exon_id "ENSE00003474180.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8345 chr22 ENSEMBL CDS 21173929 21174188 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 6; exon_id "ENSE00003474180.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8346 chr22 ENSEMBL exon 21172771 21172837 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 7; exon_id "ENSE00003666817.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8347 chr22 ENSEMBL CDS 21172771 21172837 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 7; exon_id "ENSE00003666817.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8348 chr22 ENSEMBL exon 21167646 21167794 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 8; exon_id "ENSE00003549460.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8349 chr22 ENSEMBL CDS 21167646 21167794 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 8; exon_id "ENSE00003549460.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8350 chr22 ENSEMBL exon 21165255 21165320 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 9; exon_id "ENSE00003534742.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8351 chr22 ENSEMBL CDS 21165255 21165320 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 9; exon_id "ENSE00003534742.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8352 chr22 ENSEMBL exon 21161650 21161746 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 10; exon_id "ENSE00003547793.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8353 chr22 ENSEMBL CDS 21161650 21161746 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 10; exon_id "ENSE00003547793.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8354 chr22 ENSEMBL exon 21159262 21159453 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 11; exon_id "ENSE00003535601.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8355 chr22 ENSEMBL CDS 21159262 21159453 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 11; exon_id "ENSE00003535601.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8356 chr22 ENSEMBL exon 21158588 21158688 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 12; exon_id "ENSE00003515404.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8357 chr22 ENSEMBL CDS 21158588 21158688 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 12; exon_id "ENSE00003515404.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8358 chr22 ENSEMBL exon 21157479 21157608 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 13; exon_id "ENSE00003612620.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8359 chr22 ENSEMBL CDS 21157479 21157608 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 13; exon_id "ENSE00003612620.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8360 chr22 ENSEMBL exon 21156261 21156393 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 14; exon_id "ENSE00003604552.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8361 chr22 ENSEMBL CDS 21156261 21156393 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 14; exon_id "ENSE00003604552.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8362 chr22 ENSEMBL exon 21153959 21154054 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 15; exon_id "ENSE00003567417.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8363 chr22 ENSEMBL CDS 21153959 21154054 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 15; exon_id "ENSE00003567417.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8364 chr22 ENSEMBL exon 21153381 21153564 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 16; exon_id "ENSE00003564903.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8365 chr22 ENSEMBL CDS 21153381 21153564 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 16; exon_id "ENSE00003564903.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8366 chr22 ENSEMBL exon 21152872 21152975 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 17; exon_id "ENSE00001710190.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8367 chr22 ENSEMBL CDS 21152872 21152975 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 17; exon_id "ENSE00001710190.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8368 chr22 ENSEMBL exon 21150434 21150602 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 18; exon_id "ENSE00001792161.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8369 chr22 ENSEMBL CDS 21150434 21150602 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 18; exon_id "ENSE00001792161.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8370 chr22 ENSEMBL exon 21147481 21147531 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 19; exon_id "ENSE00003595697.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8371 chr22 ENSEMBL CDS 21147481 21147531 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 19; exon_id "ENSE00003595697.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8372 chr22 ENSEMBL exon 21119873 21119981 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 20; exon_id "ENSE00003466849.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8373 chr22 ENSEMBL CDS 21119873 21119981 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 20; exon_id "ENSE00003466849.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8374 chr22 ENSEMBL exon 21119388 21119524 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 21; exon_id "ENSE00003474947.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8375 chr22 ENSEMBL CDS 21119388 21119524 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 21; exon_id "ENSE00003474947.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8376 chr22 ENSEMBL exon 21119105 21119238 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 22; exon_id "ENSE00003684445.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8377 chr22 ENSEMBL CDS 21119105 21119238 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 22; exon_id "ENSE00003684445.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8378 chr22 ENSEMBL exon 21115592 21115674 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 23; exon_id "ENSE00003589088.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8379 chr22 ENSEMBL CDS 21115592 21115674 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 23; exon_id "ENSE00003589088.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8380 chr22 ENSEMBL exon 21107398 21107468 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 24; exon_id "ENSE00001654715.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8381 chr22 ENSEMBL CDS 21107398 21107468 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 24; exon_id "ENSE00001654715.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8382 chr22 ENSEMBL exon 21107191 21107315 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 25; exon_id "ENSE00001644702.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8383 chr22 ENSEMBL CDS 21107191 21107315 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 25; exon_id "ENSE00001644702.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8384 chr22 ENSEMBL exon 21105962 21106043 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 26; exon_id "ENSE00001636327.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8385 chr22 ENSEMBL CDS 21105962 21106043 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 26; exon_id "ENSE00001636327.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8386 chr22 ENSEMBL exon 21105581 21105664 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 27; exon_id "ENSE00003564578.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8387 chr22 ENSEMBL CDS 21105581 21105664 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 27; exon_id "ENSE00003564578.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8388 chr22 ENSEMBL exon 21104193 21104282 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 28; exon_id "ENSE00003641217.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8389 chr22 ENSEMBL CDS 21104193 21104282 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 28; exon_id "ENSE00003641217.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8390 chr22 ENSEMBL exon 21101871 21101990 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 29; exon_id "ENSE00001634710.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8391 chr22 ENSEMBL CDS 21101871 21101990 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 29; exon_id "ENSE00001634710.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8392 chr22 ENSEMBL exon 21098916 21099008 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 30; exon_id "ENSE00001620613.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8393 chr22 ENSEMBL CDS 21098916 21099008 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 30; exon_id "ENSE00001620613.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8394 chr22 ENSEMBL exon 21096896 21097052 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 31; exon_id "ENSE00001786226.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8395 chr22 ENSEMBL CDS 21096896 21097052 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 31; exon_id "ENSE00001786226.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8396 chr22 ENSEMBL exon 21096516 21096643 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 32; exon_id "ENSE00003568806.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8397 chr22 ENSEMBL CDS 21096516 21096643 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 32; exon_id "ENSE00003568806.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8398 chr22 ENSEMBL exon 21088683 21088841 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 33; exon_id "ENSE00001661705.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8399 chr22 ENSEMBL CDS 21088683 21088841 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 33; exon_id "ENSE00001661705.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8400 chr22 ENSEMBL exon 21088331 21088482 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 34; exon_id "ENSE00003678829.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8401 chr22 ENSEMBL CDS 21088331 21088482 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 34; exon_id "ENSE00003678829.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8402 chr22 ENSEMBL exon 21088024 21088131 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 35; exon_id "ENSE00003472717.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8403 chr22 ENSEMBL CDS 21088024 21088131 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 35; exon_id "ENSE00003472717.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8404 chr22 ENSEMBL exon 21087259 21087386 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 36; exon_id "ENSE00003550076.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8405 chr22 ENSEMBL CDS 21087259 21087386 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 36; exon_id "ENSE00003550076.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8406 chr22 ENSEMBL exon 21084180 21084299 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 37; exon_id "ENSE00003684671.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8407 chr22 ENSEMBL CDS 21084180 21084299 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 37; exon_id "ENSE00003684671.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8408 chr22 ENSEMBL exon 21083920 21083999 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 38; exon_id "ENSE00003551725.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8409 chr22 ENSEMBL CDS 21083920 21083999 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 38; exon_id "ENSE00003551725.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8410 chr22 ENSEMBL exon 21083601 21083794 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 39; exon_id "ENSE00003471014.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8411 chr22 ENSEMBL CDS 21083601 21083794 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 39; exon_id "ENSE00003471014.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8412 chr22 ENSEMBL exon 21082062 21082152 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 40; exon_id "ENSE00003488341.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8413 chr22 ENSEMBL CDS 21082062 21082152 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 40; exon_id "ENSE00003488341.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8414 chr22 ENSEMBL exon 21081518 21081685 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 41; exon_id "ENSE00003484938.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8415 chr22 ENSEMBL CDS 21081518 21081685 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 41; exon_id "ENSE00003484938.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8416 chr22 ENSEMBL exon 21080776 21080829 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 42; exon_id "ENSE00003502775.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8417 chr22 ENSEMBL CDS 21080776 21080829 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 42; exon_id "ENSE00003502775.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8418 chr22 ENSEMBL exon 21075586 21075706 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 43; exon_id "ENSE00003579791.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8419 chr22 ENSEMBL CDS 21075586 21075706 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 43; exon_id "ENSE00003579791.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8420 chr22 ENSEMBL exon 21072981 21073110 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 44; exon_id "ENSE00003562568.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8421 chr22 ENSEMBL CDS 21072981 21073110 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 44; exon_id "ENSE00003562568.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8422 chr22 ENSEMBL exon 21071996 21072066 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 45; exon_id "ENSE00003568190.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8423 chr22 ENSEMBL CDS 21071996 21072066 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 45; exon_id "ENSE00003568190.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8424 chr22 ENSEMBL exon 21068916 21068988 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 46; exon_id "ENSE00003523646.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8425 chr22 ENSEMBL CDS 21068916 21068988 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 46; exon_id "ENSE00003523646.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8426 chr22 ENSEMBL exon 21068746 21068816 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 47; exon_id "ENSE00003599476.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8427 chr22 ENSEMBL CDS 21068746 21068816 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 47; exon_id "ENSE00003599476.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8428 chr22 ENSEMBL exon 21067569 21067678 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 48; exon_id "ENSE00003604406.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8429 chr22 ENSEMBL CDS 21067569 21067678 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 48; exon_id "ENSE00003604406.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8430 chr22 ENSEMBL exon 21066981 21067085 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 49; exon_id "ENSE00003509500.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8431 chr22 ENSEMBL CDS 21066981 21067085 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 49; exon_id "ENSE00003509500.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8432 chr22 ENSEMBL exon 21066774 21066899 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 50; exon_id "ENSE00003560817.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8433 chr22 ENSEMBL CDS 21066774 21066899 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 50; exon_id "ENSE00003560817.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8434 chr22 ENSEMBL exon 21065629 21065749 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 51; exon_id "ENSE00003483612.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8435 chr22 ENSEMBL CDS 21065629 21065749 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 51; exon_id "ENSE00003483612.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8436 chr22 ENSEMBL exon 21064987 21065146 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 52; exon_id "ENSE00003467040.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8437 chr22 ENSEMBL CDS 21064987 21065146 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 52; exon_id "ENSE00003467040.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8438 chr22 ENSEMBL exon 21064196 21064285 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 53; exon_id "ENSE00003463977.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8439 chr22 ENSEMBL CDS 21064196 21064285 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 53; exon_id "ENSE00003463977.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8440 chr22 ENSEMBL exon 21063584 21063667 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 54; exon_id "ENSE00003520208.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8441 chr22 ENSEMBL CDS 21063584 21063667 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 54; exon_id "ENSE00003520208.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8442 chr22 ENSEMBL exon 21061981 21062386 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 55; exon_id "ENSE00003479140.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8443 chr22 ENSEMBL CDS 21062338 21062386 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 55; exon_id "ENSE00003479140.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8444 chr22 ENSEMBL stop_codon 21062335 21062337 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; exon_number 55; exon_id "ENSE00003479140.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8445 chr22 ENSEMBL UTR 21212858 21213070 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8446 chr22 ENSEMBL UTR 21193002 21193019 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8447 chr22 ENSEMBL UTR 21061981 21062337 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000572273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-202"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8448 chr22 ENSEMBL transcript 21061981 21088955 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8449 chr22 ENSEMBL exon 21088683 21088955 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 1; exon_id "ENSE00003644857.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8450 chr22 ENSEMBL CDS 21088683 21088838 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 1; exon_id "ENSE00003644857.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8451 chr22 ENSEMBL start_codon 21088836 21088838 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 1; exon_id "ENSE00003644857.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8452 chr22 ENSEMBL exon 21088331 21088482 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 2; exon_id "ENSE00003678829.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8453 chr22 ENSEMBL CDS 21088331 21088482 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 2; exon_id "ENSE00003678829.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8454 chr22 ENSEMBL exon 21088024 21088131 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 3; exon_id "ENSE00003472717.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8455 chr22 ENSEMBL CDS 21088024 21088131 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 3; exon_id "ENSE00003472717.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8456 chr22 ENSEMBL exon 21087259 21087386 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 4; exon_id "ENSE00003550076.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8457 chr22 ENSEMBL CDS 21087259 21087386 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 4; exon_id "ENSE00003550076.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8458 chr22 ENSEMBL exon 21084180 21084299 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 5; exon_id "ENSE00003684671.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8459 chr22 ENSEMBL CDS 21084180 21084299 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 5; exon_id "ENSE00003684671.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8460 chr22 ENSEMBL exon 21083920 21083999 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 6; exon_id "ENSE00003551725.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8461 chr22 ENSEMBL CDS 21083920 21083999 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 6; exon_id "ENSE00003551725.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8462 chr22 ENSEMBL exon 21083601 21083794 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 7; exon_id "ENSE00003471014.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8463 chr22 ENSEMBL CDS 21083601 21083794 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 7; exon_id "ENSE00003471014.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8464 chr22 ENSEMBL exon 21082062 21082152 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 8; exon_id "ENSE00003488341.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8465 chr22 ENSEMBL CDS 21082062 21082152 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 8; exon_id "ENSE00003488341.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8466 chr22 ENSEMBL exon 21081518 21081685 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 9; exon_id "ENSE00003484938.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8467 chr22 ENSEMBL CDS 21081518 21081685 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 9; exon_id "ENSE00003484938.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8468 chr22 ENSEMBL exon 21080776 21080829 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 10; exon_id "ENSE00003502775.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8469 chr22 ENSEMBL CDS 21080776 21080829 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 10; exon_id "ENSE00003502775.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8470 chr22 ENSEMBL exon 21075586 21075706 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 11; exon_id "ENSE00003579791.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8471 chr22 ENSEMBL CDS 21075586 21075706 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 11; exon_id "ENSE00003579791.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8472 chr22 ENSEMBL exon 21072981 21073110 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 12; exon_id "ENSE00003562568.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8473 chr22 ENSEMBL CDS 21072981 21073110 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 12; exon_id "ENSE00003562568.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8474 chr22 ENSEMBL exon 21071996 21072066 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 13; exon_id "ENSE00003568190.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8475 chr22 ENSEMBL CDS 21071996 21072066 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 13; exon_id "ENSE00003568190.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8476 chr22 ENSEMBL exon 21068916 21068988 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 14; exon_id "ENSE00003523646.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8477 chr22 ENSEMBL CDS 21068916 21068988 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 14; exon_id "ENSE00003523646.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8478 chr22 ENSEMBL exon 21068746 21068816 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 15; exon_id "ENSE00003599476.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8479 chr22 ENSEMBL CDS 21068746 21068816 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 15; exon_id "ENSE00003599476.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8480 chr22 ENSEMBL exon 21067569 21067678 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 16; exon_id "ENSE00003604406.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8481 chr22 ENSEMBL CDS 21067569 21067678 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 16; exon_id "ENSE00003604406.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8482 chr22 ENSEMBL exon 21066981 21067085 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 17; exon_id "ENSE00003509500.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8483 chr22 ENSEMBL CDS 21066981 21067085 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 17; exon_id "ENSE00003509500.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8484 chr22 ENSEMBL exon 21066774 21066899 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 18; exon_id "ENSE00003560817.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8485 chr22 ENSEMBL CDS 21066774 21066899 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 18; exon_id "ENSE00003560817.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8486 chr22 ENSEMBL exon 21065629 21065749 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 19; exon_id "ENSE00003483612.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8487 chr22 ENSEMBL CDS 21065629 21065749 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 19; exon_id "ENSE00003483612.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8488 chr22 ENSEMBL exon 21064987 21065146 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 20; exon_id "ENSE00003467040.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8489 chr22 ENSEMBL CDS 21064987 21065146 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 20; exon_id "ENSE00003467040.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8490 chr22 ENSEMBL exon 21064196 21064285 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 21; exon_id "ENSE00003463977.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8491 chr22 ENSEMBL CDS 21064196 21064285 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 21; exon_id "ENSE00003463977.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8492 chr22 ENSEMBL exon 21063584 21063667 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 22; exon_id "ENSE00003520208.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8493 chr22 ENSEMBL CDS 21063584 21063667 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 22; exon_id "ENSE00003520208.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8494 chr22 ENSEMBL exon 21061981 21062386 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 23; exon_id "ENSE00003479140.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8495 chr22 ENSEMBL CDS 21062338 21062386 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 23; exon_id "ENSE00003479140.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8496 chr22 ENSEMBL stop_codon 21062335 21062337 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; exon_number 23; exon_id "ENSE00003479140.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8497 chr22 ENSEMBL UTR 21088839 21088955 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8498 chr22 ENSEMBL UTR 21061981 21062337 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000414196.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PI4KA-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46667.1"; havana_gene "OTTHUMG00000167440.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8499 chr22 HAVANA transcript 21061991 21088955 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8500 chr22 HAVANA exon 21088683 21088955 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 1; exon_id "ENSE00003654043.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8501 chr22 HAVANA exon 21088331 21088482 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 2; exon_id "ENSE00003581625.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8502 chr22 HAVANA exon 21088024 21088131 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 3; exon_id "ENSE00003570227.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8503 chr22 HAVANA exon 21087259 21087386 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 4; exon_id "ENSE00003676390.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8504 chr22 HAVANA exon 21084180 21084299 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 5; exon_id "ENSE00003625376.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8505 chr22 HAVANA exon 21083920 21083999 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 6; exon_id "ENSE00003625592.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8506 chr22 HAVANA exon 21083601 21083794 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 7; exon_id "ENSE00003566342.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8507 chr22 HAVANA exon 21082062 21082152 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 8; exon_id "ENSE00003633204.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8508 chr22 HAVANA exon 21081518 21081685 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 9; exon_id "ENSE00003474036.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8509 chr22 HAVANA exon 21080776 21080829 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 10; exon_id "ENSE00003466747.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8510 chr22 HAVANA exon 21075586 21075706 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 11; exon_id "ENSE00003565793.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8511 chr22 HAVANA exon 21072981 21073110 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 12; exon_id "ENSE00003555567.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8512 chr22 HAVANA exon 21071996 21072066 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 13; exon_id "ENSE00003561787.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8513 chr22 HAVANA exon 21068916 21068988 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 14; exon_id "ENSE00003687412.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8514 chr22 HAVANA exon 21068746 21068816 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 15; exon_id "ENSE00003595764.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8515 chr22 HAVANA exon 21067569 21067678 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 16; exon_id "ENSE00003656809.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8516 chr22 HAVANA exon 21066981 21067085 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 17; exon_id "ENSE00003551105.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8517 chr22 HAVANA exon 21066774 21066899 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 18; exon_id "ENSE00003677348.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8518 chr22 HAVANA exon 21065629 21065749 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 19; exon_id "ENSE00003672393.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8519 chr22 HAVANA exon 21064987 21065146 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 20; exon_id "ENSE00003594094.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8520 chr22 HAVANA exon 21064196 21064285 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 21; exon_id "ENSE00003672923.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8521 chr22 HAVANA exon 21063584 21063667 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 22; exon_id "ENSE00003493202.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8522 chr22 HAVANA exon 21061991 21062386 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-003"; exon_number 23; exon_id "ENSE00001848663.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319941.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8523 chr22 HAVANA transcript 21061992 21081645 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466772.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-004"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319942.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8524 chr22 HAVANA exon 21081518 21081645 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466772.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-004"; exon_number 1; exon_id "ENSE00001892234.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319942.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8525 chr22 HAVANA exon 21080786 21080829 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466772.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-004"; exon_number 2; exon_id "ENSE00001833124.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319942.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8526 chr22 HAVANA exon 21075586 21075706 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466772.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-004"; exon_number 3; exon_id "ENSE00003565793.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319942.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8527 chr22 HAVANA exon 21072981 21073110 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466772.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-004"; exon_number 4; exon_id "ENSE00003555567.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319942.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8528 chr22 HAVANA exon 21071996 21072066 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466772.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-004"; exon_number 5; exon_id "ENSE00003561787.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319942.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8529 chr22 HAVANA exon 21068916 21068988 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466772.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-004"; exon_number 6; exon_id "ENSE00003687412.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319942.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8530 chr22 HAVANA exon 21068746 21068816 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466772.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-004"; exon_number 7; exon_id "ENSE00003595764.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319942.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8531 chr22 HAVANA exon 21067569 21067678 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466772.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-004"; exon_number 8; exon_id "ENSE00003656809.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319942.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8532 chr22 HAVANA exon 21066981 21067085 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466772.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-004"; exon_number 9; exon_id "ENSE00003551105.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319942.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8533 chr22 HAVANA exon 21066774 21066899 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466772.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-004"; exon_number 10; exon_id "ENSE00003677348.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319942.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8534 chr22 HAVANA exon 21064196 21065726 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466772.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-004"; exon_number 11; exon_id "ENSE00001887276.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319942.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8535 chr22 HAVANA exon 21063584 21063787 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466772.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-004"; exon_number 12; exon_id "ENSE00001901891.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319942.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8536 chr22 HAVANA exon 21061992 21062386 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466772.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-004"; exon_number 13; exon_id "ENSE00001893292.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319942.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8537 chr22 HAVANA transcript 21062007 21075706 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8538 chr22 HAVANA exon 21075586 21075706 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 1; exon_id "ENSE00003579791.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8539 chr22 HAVANA CDS 21075586 21075706 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 1; exon_id "ENSE00003579791.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8540 chr22 HAVANA start_codon 21075704 21075706 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 1; exon_id "ENSE00003579791.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8541 chr22 HAVANA exon 21072981 21073110 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 2; exon_id "ENSE00003562568.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8542 chr22 HAVANA CDS 21072981 21073110 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 2; exon_id "ENSE00003562568.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8543 chr22 HAVANA exon 21071996 21072066 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 3; exon_id "ENSE00003568190.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8544 chr22 HAVANA CDS 21071996 21072066 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 3; exon_id "ENSE00003568190.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8545 chr22 HAVANA exon 21068916 21068988 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 4; exon_id "ENSE00003523646.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8546 chr22 HAVANA CDS 21068916 21068988 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 4; exon_id "ENSE00003523646.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8547 chr22 HAVANA exon 21068746 21068816 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 5; exon_id "ENSE00003599476.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8548 chr22 HAVANA CDS 21068746 21068816 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 5; exon_id "ENSE00003599476.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8549 chr22 HAVANA exon 21067569 21067678 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 6; exon_id "ENSE00003604406.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8550 chr22 HAVANA CDS 21067569 21067678 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 6; exon_id "ENSE00003604406.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8551 chr22 HAVANA exon 21066981 21067085 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 7; exon_id "ENSE00003509500.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8552 chr22 HAVANA CDS 21066981 21067085 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 7; exon_id "ENSE00003509500.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8553 chr22 HAVANA exon 21066796 21066899 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 8; exon_id "ENSE00001548219.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8554 chr22 HAVANA CDS 21066796 21066899 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 8; exon_id "ENSE00001548219.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8555 chr22 HAVANA exon 21065629 21065765 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 9; exon_id "ENSE00001548067.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8556 chr22 HAVANA CDS 21065629 21065765 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 9; exon_id "ENSE00001548067.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8557 chr22 HAVANA exon 21064987 21065146 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 10; exon_id "ENSE00003467040.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8558 chr22 HAVANA CDS 21064987 21065146 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 10; exon_id "ENSE00003467040.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8559 chr22 HAVANA exon 21064196 21064285 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 11; exon_id "ENSE00003463977.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8560 chr22 HAVANA CDS 21064196 21064285 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 11; exon_id "ENSE00003463977.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8561 chr22 HAVANA exon 21063584 21063667 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 12; exon_id "ENSE00003520208.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8562 chr22 HAVANA CDS 21063584 21063667 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 12; exon_id "ENSE00003520208.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8563 chr22 HAVANA exon 21062007 21062386 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 13; exon_id "ENSE00001536971.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8564 chr22 HAVANA CDS 21062338 21062386 . - 1 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 13; exon_id "ENSE00001536971.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8565 chr22 HAVANA stop_codon 21062335 21062337 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; exon_number 13; exon_id "ENSE00001536971.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8566 chr22 HAVANA UTR 21062007 21062337 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000399213.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PI4KA-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319944.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8567 chr22 HAVANA transcript 21065040 21067281 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000482030.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-019"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319957.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8568 chr22 HAVANA exon 21066981 21067281 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000482030.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-019"; exon_number 1; exon_id "ENSE00001832614.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319957.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8569 chr22 HAVANA exon 21066774 21066899 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000482030.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-019"; exon_number 2; exon_id "ENSE00003677348.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319957.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8570 chr22 HAVANA exon 21065629 21065749 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000482030.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-019"; exon_number 3; exon_id "ENSE00003672393.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319957.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8571 chr22 HAVANA exon 21065040 21065146 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000482030.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-019"; exon_number 4; exon_id "ENSE00001870195.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319957.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8572 chr22 HAVANA transcript 21065590 21072132 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-018"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319956.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8573 chr22 HAVANA exon 21071996 21072132 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-018"; exon_number 1; exon_id "ENSE00001861592.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319956.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8574 chr22 HAVANA exon 21068916 21068988 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-018"; exon_number 2; exon_id "ENSE00003687412.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319956.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8575 chr22 HAVANA exon 21068746 21068816 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-018"; exon_number 3; exon_id "ENSE00003595764.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319956.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8576 chr22 HAVANA exon 21067569 21067678 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-018"; exon_number 4; exon_id "ENSE00003656809.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319956.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8577 chr22 HAVANA exon 21066981 21067085 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-018"; exon_number 5; exon_id "ENSE00003551105.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319956.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8578 chr22 HAVANA exon 21066774 21066899 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-018"; exon_number 6; exon_id "ENSE00003677348.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319956.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8579 chr22 HAVANA exon 21065590 21065749 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-018"; exon_number 7; exon_id "ENSE00001907845.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319956.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8580 chr22 HAVANA transcript 21080604 21081581 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000489966.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-017"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319955.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8581 chr22 HAVANA exon 21081518 21081581 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000489966.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-017"; exon_number 1; exon_id "ENSE00001832332.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319955.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8582 chr22 HAVANA exon 21080604 21080829 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000489966.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-017"; exon_number 2; exon_id "ENSE00001882273.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319955.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8583 chr22 HAVANA transcript 21081857 21083759 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485123.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-016"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319954.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8584 chr22 HAVANA exon 21083601 21083759 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485123.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-016"; exon_number 1; exon_id "ENSE00001907342.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319954.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8585 chr22 HAVANA exon 21081857 21082152 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485123.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-016"; exon_number 2; exon_id "ENSE00001955175.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319954.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8586 chr22 HAVANA transcript 21088024 21088783 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000462210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-015"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319953.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8587 chr22 HAVANA exon 21088683 21088783 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000462210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-015"; exon_number 1; exon_id "ENSE00001871112.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319953.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8588 chr22 HAVANA exon 21088024 21088482 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000462210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-015"; exon_number 2; exon_id "ENSE00001947318.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319953.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8589 chr22 HAVANA transcript 21088765 21091154 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477368.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PI4KA-014"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319952.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8590 chr22 HAVANA exon 21090697 21091154 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477368.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PI4KA-014"; exon_number 1; exon_id "ENSE00001892608.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319952.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8591 chr22 HAVANA exon 21088765 21088841 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000477368.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PI4KA-014"; exon_number 2; exon_id "ENSE00001917029.1"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319952.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8592 chr22 HAVANA transcript 21088765 21097205 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000494113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-013"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319951.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8593 chr22 HAVANA exon 21096896 21097205 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000494113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-013"; exon_number 1; exon_id "ENSE00001937350.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319951.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8594 chr22 HAVANA exon 21096516 21096643 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000494113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-013"; exon_number 2; exon_id "ENSE00003568434.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319951.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8595 chr22 HAVANA exon 21088765 21088841 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000494113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-013"; exon_number 3; exon_id "ENSE00001917029.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319951.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8596 chr22 HAVANA transcript 21101772 21105968 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000475414.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-012"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319950.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8597 chr22 HAVANA exon 21105962 21105968 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000475414.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-012"; exon_number 1; exon_id "ENSE00001900177.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319950.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8598 chr22 HAVANA exon 21105581 21105664 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000475414.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-012"; exon_number 2; exon_id "ENSE00003591358.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319950.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8599 chr22 HAVANA exon 21104193 21104282 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000475414.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-012"; exon_number 3; exon_id "ENSE00003509974.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319950.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8600 chr22 HAVANA exon 21101772 21101990 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000475414.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-012"; exon_number 4; exon_id "ENSE00001848863.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319950.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8601 chr22 HAVANA transcript 21107434 21147662 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466162.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-010"; level 2; tag "basic"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319948.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8602 chr22 HAVANA exon 21147623 21147662 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466162.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-010"; exon_number 1; exon_id "ENSE00001904345.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319948.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8603 chr22 HAVANA exon 21147481 21147531 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466162.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-010"; exon_number 2; exon_id "ENSE00003684921.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319948.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8604 chr22 HAVANA exon 21119873 21119981 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466162.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-010"; exon_number 3; exon_id "ENSE00003530136.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319948.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8605 chr22 HAVANA exon 21119388 21119524 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466162.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-010"; exon_number 4; exon_id "ENSE00003553521.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319948.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8606 chr22 HAVANA exon 21119105 21119238 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466162.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-010"; exon_number 5; exon_id "ENSE00003537858.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319948.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8607 chr22 HAVANA exon 21115592 21115674 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466162.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-010"; exon_number 6; exon_id "ENSE00003573003.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319948.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8608 chr22 HAVANA exon 21107434 21107468 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000466162.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-010"; exon_number 7; exon_id "ENSE00001917576.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319948.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8609 chr22 HAVANA transcript 21107434 21147662 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000490873.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-011"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8610 chr22 HAVANA exon 21147623 21147662 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000490873.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-011"; exon_number 1; exon_id "ENSE00001904345.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8611 chr22 HAVANA exon 21147481 21147531 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000490873.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-011"; exon_number 2; exon_id "ENSE00003684921.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8612 chr22 HAVANA exon 21119873 21119981 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000490873.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-011"; exon_number 3; exon_id "ENSE00003530136.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8613 chr22 HAVANA exon 21119388 21119524 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000490873.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-011"; exon_number 4; exon_id "ENSE00003553521.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8614 chr22 HAVANA exon 21119105 21119238 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000490873.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-011"; exon_number 5; exon_id "ENSE00003537858.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8615 chr22 HAVANA exon 21115592 21115674 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000490873.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-011"; exon_number 6; exon_id "ENSE00003573003.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8616 chr22 HAVANA exon 21107434 21107468 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000490873.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KA-011"; exon_number 7; exon_id "ENSE00001917576.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8617 chr22 HAVANA transcript 21118903 21150446 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000484220.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-009"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319947.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8618 chr22 HAVANA exon 21150434 21150446 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000484220.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-009"; exon_number 1; exon_id "ENSE00001936202.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319947.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8619 chr22 HAVANA exon 21147481 21147531 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000484220.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-009"; exon_number 2; exon_id "ENSE00003684921.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319947.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8620 chr22 HAVANA exon 21119873 21119981 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000484220.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-009"; exon_number 3; exon_id "ENSE00003530136.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319947.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8621 chr22 HAVANA exon 21119388 21119524 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000484220.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-009"; exon_number 4; exon_id "ENSE00003553521.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319947.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8622 chr22 HAVANA exon 21118903 21119238 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000484220.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-009"; exon_number 5; exon_id "ENSE00001814341.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319947.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8623 chr22 HAVANA transcript 21152766 21213100 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8624 chr22 HAVANA exon 21212858 21213100 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 1; exon_id "ENSE00003617921.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8625 chr22 HAVANA exon 21192903 21193019 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 2; exon_id "ENSE00003656124.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8626 chr22 HAVANA exon 21188850 21188943 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 3; exon_id "ENSE00003676089.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8627 chr22 HAVANA exon 21178614 21178702 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 4; exon_id "ENSE00003476956.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8628 chr22 HAVANA exon 21174827 21174899 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 5; exon_id "ENSE00003613686.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8629 chr22 HAVANA exon 21173929 21174188 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 6; exon_id "ENSE00003582546.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8630 chr22 HAVANA exon 21172771 21172837 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 7; exon_id "ENSE00003615176.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8631 chr22 HAVANA exon 21167646 21167794 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 8; exon_id "ENSE00003476731.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8632 chr22 HAVANA exon 21165255 21165320 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 9; exon_id "ENSE00003499204.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8633 chr22 HAVANA exon 21161650 21161746 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 10; exon_id "ENSE00003619799.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8634 chr22 HAVANA exon 21159262 21159453 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 11; exon_id "ENSE00003681116.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8635 chr22 HAVANA exon 21158588 21158688 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 12; exon_id "ENSE00003679107.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8636 chr22 HAVANA exon 21157479 21157608 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 13; exon_id "ENSE00003505931.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8637 chr22 HAVANA exon 21156261 21156393 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 14; exon_id "ENSE00003583212.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8638 chr22 HAVANA exon 21153959 21154054 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 15; exon_id "ENSE00003537702.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8639 chr22 HAVANA exon 21153381 21153564 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 16; exon_id "ENSE00003651074.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8640 chr22 HAVANA exon 21152766 21152975 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-002"; exon_number 17; exon_id "ENSE00001937783.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319940.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8641 chr22 HAVANA transcript 21153228 21156306 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485950.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-008"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319946.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8642 chr22 HAVANA exon 21156261 21156306 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485950.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-008"; exon_number 1; exon_id "ENSE00001819357.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319946.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8643 chr22 HAVANA exon 21153959 21154054 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485950.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-008"; exon_number 2; exon_id "ENSE00003537702.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319946.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8644 chr22 HAVANA exon 21153228 21153564 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000485950.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KA-008"; exon_number 3; exon_id "ENSE00001854173.1"; level 2; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319946.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8645 chr22 HAVANA transcript 21178635 21213705 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000449120.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PI4KA-007"; level 1; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8646 chr22 HAVANA exon 21213411 21213705 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000449120.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PI4KA-007"; exon_number 1; exon_id "ENSE00001728362.1"; level 1; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8647 chr22 HAVANA exon 21192903 21193019 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000449120.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PI4KA-007"; exon_number 2; exon_id "ENSE00003571645.1"; level 1; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8648 chr22 HAVANA CDS 21192903 21193001 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000449120.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PI4KA-007"; exon_number 2; exon_id "ENSE00003571645.1"; level 1; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8649 chr22 HAVANA start_codon 21192999 21193001 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000449120.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PI4KA-007"; exon_number 2; exon_id "ENSE00003571645.1"; level 1; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8650 chr22 HAVANA exon 21188850 21188943 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000449120.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PI4KA-007"; exon_number 3; exon_id "ENSE00003601267.1"; level 1; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8651 chr22 HAVANA CDS 21188850 21188943 . - 0 gene_id "ENSG00000241973.6"; transcript_id "ENST00000449120.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PI4KA-007"; exon_number 3; exon_id "ENSE00003601267.1"; level 1; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8652 chr22 HAVANA exon 21178635 21178702 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000449120.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PI4KA-007"; exon_number 4; exon_id "ENSE00001768412.1"; level 1; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8653 chr22 HAVANA CDS 21178635 21178702 . - 2 gene_id "ENSG00000241973.6"; transcript_id "ENST00000449120.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PI4KA-007"; exon_number 4; exon_id "ENSE00001768412.1"; level 1; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8654 chr22 HAVANA UTR 21213411 21213705 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000449120.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PI4KA-007"; level 1; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8655 chr22 HAVANA UTR 21193002 21193019 . - . gene_id "ENSG00000241973.6"; transcript_id "ENST00000449120.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PI4KA"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PI4KA-007"; level 1; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000167440.2"; havana_transcript "OTTHUMT00000319945.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8656 chr22 HAVANA gene 21077335 21080208 . + . gene_id "ENSG00000234252.1"; transcript_id "ENSG00000234252.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC007308.6"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AC007308.6"; level 2; havana_gene "OTTHUMG00000153507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8657 chr22 HAVANA transcript 21077335 21080208 . + . gene_id "ENSG00000234252.1"; transcript_id "ENST00000430719.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC007308.6"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC007308.6-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000153507.1"; havana_transcript "OTTHUMT00000331441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8658 chr22 HAVANA exon 21077335 21078054 . + . gene_id "ENSG00000234252.1"; transcript_id "ENST00000430719.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC007308.6"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC007308.6-001"; exon_number 1; exon_id "ENSE00001767229.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000153507.1"; havana_transcript "OTTHUMT00000331441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8659 chr22 HAVANA exon 21078529 21080208 . + . gene_id "ENSG00000234252.1"; transcript_id "ENST00000430719.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC007308.6"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC007308.6-001"; exon_number 2; exon_id "ENSE00001674352.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000153507.1"; havana_transcript "OTTHUMT00000331441.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8660 chr22 HAVANA gene 21128167 21142008 . + . gene_id "ENSG00000099937.6"; transcript_id "ENSG00000099937.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1"; level 2; havana_gene "OTTHUMG00000150755.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8661 chr22 HAVANA transcript 21128167 21142008 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8662 chr22 HAVANA exon 21128167 21128433 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; exon_number 1; exon_id "ENSE00001320327.7"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8663 chr22 HAVANA exon 21133585 21134489 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; exon_number 2; exon_id "ENSE00001299470.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8664 chr22 HAVANA CDS 21133601 21134489 . + 0 gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; exon_number 2; exon_id "ENSE00001299470.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8665 chr22 HAVANA start_codon 21133601 21133603 . + 0 gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; exon_number 2; exon_id "ENSE00001299470.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8666 chr22 HAVANA exon 21138260 21138533 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; exon_number 3; exon_id "ENSE00000650952.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8667 chr22 HAVANA CDS 21138260 21138533 . + 2 gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; exon_number 3; exon_id "ENSE00000650952.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8668 chr22 HAVANA exon 21140292 21140436 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; exon_number 4; exon_id "ENSE00000650953.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8669 chr22 HAVANA CDS 21140292 21140436 . + 1 gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; exon_number 4; exon_id "ENSE00000650953.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8670 chr22 HAVANA exon 21141163 21142008 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; exon_number 5; exon_id "ENSE00000879274.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8671 chr22 HAVANA CDS 21141163 21141351 . + 0 gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; exon_number 5; exon_id "ENSE00000879274.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8672 chr22 HAVANA stop_codon 21141352 21141354 . + 0 gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; exon_number 5; exon_id "ENSE00000879274.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8673 chr22 HAVANA UTR 21128167 21128433 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8674 chr22 HAVANA UTR 21133585 21133600 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8675 chr22 HAVANA UTR 21141352 21142008 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000215727.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319961.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8676 chr22 HAVANA transcript 21133469 21141520 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000406799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319962.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8677 chr22 HAVANA exon 21133469 21134489 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000406799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-002"; exon_number 1; exon_id "ENSE00001557818.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319962.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8678 chr22 HAVANA CDS 21133601 21134489 . + 0 gene_id "ENSG00000099937.6"; transcript_id "ENST00000406799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-002"; exon_number 1; exon_id "ENSE00001557818.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319962.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8679 chr22 HAVANA start_codon 21133601 21133603 . + 0 gene_id "ENSG00000099937.6"; transcript_id "ENST00000406799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-002"; exon_number 1; exon_id "ENSE00001557818.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319962.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8680 chr22 HAVANA exon 21138260 21138533 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000406799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-002"; exon_number 2; exon_id "ENSE00000650952.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319962.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8681 chr22 HAVANA CDS 21138260 21138533 . + 2 gene_id "ENSG00000099937.6"; transcript_id "ENST00000406799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-002"; exon_number 2; exon_id "ENSE00000650952.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319962.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8682 chr22 HAVANA exon 21140292 21140436 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000406799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-002"; exon_number 3; exon_id "ENSE00000650953.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319962.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8683 chr22 HAVANA CDS 21140292 21140436 . + 1 gene_id "ENSG00000099937.6"; transcript_id "ENST00000406799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-002"; exon_number 3; exon_id "ENSE00000650953.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319962.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8684 chr22 HAVANA exon 21141163 21141520 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000406799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-002"; exon_number 4; exon_id "ENSE00001554431.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319962.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8685 chr22 HAVANA CDS 21141163 21141351 . + 0 gene_id "ENSG00000099937.6"; transcript_id "ENST00000406799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-002"; exon_number 4; exon_id "ENSE00001554431.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319962.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8686 chr22 HAVANA stop_codon 21141352 21141354 . + 0 gene_id "ENSG00000099937.6"; transcript_id "ENST00000406799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-002"; exon_number 4; exon_id "ENSE00001554431.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319962.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8687 chr22 HAVANA UTR 21133469 21133600 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000406799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319962.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8688 chr22 HAVANA UTR 21141352 21141520 . + . gene_id "ENSG00000099937.6"; transcript_id "ENST00000406799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SERPIND1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SERPIND1-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13783.1"; havana_gene "OTTHUMG00000150755.1"; havana_transcript "OTTHUMT00000319962.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8689 chr22 HAVANA gene 21213271 21245506 . + . gene_id "ENSG00000099940.7"; transcript_id "ENSG00000099940.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29"; level 1; havana_gene "OTTHUMG00000150765.5";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8690 chr22 HAVANA transcript 21213271 21245506 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8691 chr22 HAVANA exon 21213271 21213635 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; exon_number 1; exon_id "ENSE00001313354.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8692 chr22 HAVANA CDS 21213399 21213635 . + 0 gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; exon_number 1; exon_id "ENSE00001313354.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8693 chr22 HAVANA start_codon 21213399 21213401 . + 0 gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; exon_number 1; exon_id "ENSE00001313354.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8694 chr22 HAVANA exon 21224625 21224821 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; exon_number 2; exon_id "ENSE00003544794.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8695 chr22 HAVANA CDS 21224625 21224821 . + 0 gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; exon_number 2; exon_id "ENSE00003544794.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8696 chr22 HAVANA exon 21235337 21235422 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; exon_number 3; exon_id "ENSE00000650957.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8697 chr22 HAVANA CDS 21235337 21235422 . + 1 gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; exon_number 3; exon_id "ENSE00000650957.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8698 chr22 HAVANA exon 21237759 21237857 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; exon_number 4; exon_id "ENSE00000650958.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8699 chr22 HAVANA CDS 21237759 21237857 . + 2 gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; exon_number 4; exon_id "ENSE00000650958.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8700 chr22 HAVANA exon 21241967 21245506 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; exon_number 5; exon_id "ENSE00001315626.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8701 chr22 HAVANA CDS 21241967 21242121 . + 2 gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; exon_number 5; exon_id "ENSE00001315626.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8702 chr22 HAVANA stop_codon 21242122 21242124 . + 0 gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; exon_number 5; exon_id "ENSE00001315626.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8703 chr22 HAVANA UTR 21213271 21213398 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8704 chr22 HAVANA UTR 21242122 21245506 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000215730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNAP29-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13784.1"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320000.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8705 chr22 HAVANA transcript 21213369 21225329 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000490458.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SNAP29-002"; level 2; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320147.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8706 chr22 HAVANA exon 21213369 21213635 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000490458.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SNAP29-002"; exon_number 1; exon_id "ENSE00001932100.1"; level 2; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320147.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8707 chr22 HAVANA exon 21224625 21225329 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000490458.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SNAP29-002"; exon_number 2; exon_id "ENSE00001933471.1"; level 2; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320147.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8708 chr22 HAVANA transcript 21213771 21242107 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000439214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SNAP29-003"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320148.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8709 chr22 HAVANA exon 21213771 21213928 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000439214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SNAP29-003"; exon_number 1; exon_id "ENSE00001660909.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320148.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8710 chr22 HAVANA exon 21224625 21224821 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000439214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SNAP29-003"; exon_number 2; exon_id "ENSE00003477834.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320148.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8711 chr22 HAVANA CDS 21224667 21224821 . + 0 gene_id "ENSG00000099940.7"; transcript_id "ENST00000439214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SNAP29-003"; exon_number 2; exon_id "ENSE00003477834.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320148.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8712 chr22 HAVANA start_codon 21224667 21224669 . + 0 gene_id "ENSG00000099940.7"; transcript_id "ENST00000439214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SNAP29-003"; exon_number 2; exon_id "ENSE00003477834.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320148.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8713 chr22 HAVANA exon 21235337 21235422 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000439214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SNAP29-003"; exon_number 3; exon_id "ENSE00000650957.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320148.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8714 chr22 HAVANA CDS 21235337 21235422 . + 1 gene_id "ENSG00000099940.7"; transcript_id "ENST00000439214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SNAP29-003"; exon_number 3; exon_id "ENSE00000650957.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320148.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8715 chr22 HAVANA exon 21237759 21237857 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000439214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SNAP29-003"; exon_number 4; exon_id "ENSE00000650958.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320148.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8716 chr22 HAVANA CDS 21237759 21237857 . + 2 gene_id "ENSG00000099940.7"; transcript_id "ENST00000439214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SNAP29-003"; exon_number 4; exon_id "ENSE00000650958.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320148.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8717 chr22 HAVANA exon 21241967 21242107 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000439214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SNAP29-003"; exon_number 5; exon_id "ENSE00001605474.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320148.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8718 chr22 HAVANA CDS 21241967 21242107 . + 2 gene_id "ENSG00000099940.7"; transcript_id "ENST00000439214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SNAP29-003"; exon_number 5; exon_id "ENSE00001605474.1"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320148.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8719 chr22 HAVANA UTR 21213771 21213928 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000439214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SNAP29-003"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320148.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8720 chr22 HAVANA UTR 21224625 21224666 . + . gene_id "ENSG00000099940.7"; transcript_id "ENST00000439214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNAP29"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SNAP29-003"; level 1; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150765.5"; havana_transcript "OTTHUMT00000320148.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8721 chr22 HAVANA gene 21243494 21245502 . - . gene_id "ENSG00000272600.1"; transcript_id "ENSG00000272600.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC007308.7"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AC007308.7"; level 2; havana_gene "OTTHUMG00000186194.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8722 chr22 HAVANA transcript 21243494 21245502 . - . gene_id "ENSG00000272600.1"; transcript_id "ENST00000608856.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC007308.7"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC007308.7-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186194.1"; havana_transcript "OTTHUMT00000472399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8723 chr22 HAVANA exon 21245188 21245502 . - . gene_id "ENSG00000272600.1"; transcript_id "ENST00000608856.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC007308.7"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC007308.7-001"; exon_number 1; exon_id "ENSE00003704361.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186194.1"; havana_transcript "OTTHUMT00000472399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8724 chr22 HAVANA exon 21243494 21243551 . - . gene_id "ENSG00000272600.1"; transcript_id "ENST00000608856.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC007308.7"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC007308.7-001"; exon_number 2; exon_id "ENSE00003704807.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186194.1"; havana_transcript "OTTHUMT00000472399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8725 chr22 HAVANA gene 21271714 21308037 . + . gene_id "ENSG00000099942.8"; transcript_id "ENSG00000099942.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRKL"; level 2; havana_gene "OTTHUMG00000150807.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8726 chr22 HAVANA transcript 21271714 21308037 . + . gene_id "ENSG00000099942.8"; transcript_id "ENST00000354336.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRKL-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8727 chr22 HAVANA exon 21271714 21272533 . + . gene_id "ENSG00000099942.8"; transcript_id "ENST00000354336.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRKL-001"; exon_number 1; exon_id "ENSE00001426302.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8728 chr22 HAVANA CDS 21272223 21272533 . + 0 gene_id "ENSG00000099942.8"; transcript_id "ENST00000354336.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRKL-001"; exon_number 1; exon_id "ENSE00001426302.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8729 chr22 HAVANA start_codon 21272223 21272225 . + 0 gene_id "ENSG00000099942.8"; transcript_id "ENST00000354336.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRKL-001"; exon_number 1; exon_id "ENSE00001426302.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8730 chr22 HAVANA exon 21288067 21288532 . + . gene_id "ENSG00000099942.8"; transcript_id "ENST00000354336.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRKL-001"; exon_number 2; exon_id "ENSE00000650961.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8731 chr22 HAVANA CDS 21288067 21288532 . + 1 gene_id "ENSG00000099942.8"; transcript_id "ENST00000354336.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRKL-001"; exon_number 2; exon_id "ENSE00000650961.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8732 chr22 HAVANA exon 21303999 21308037 . + . gene_id "ENSG00000099942.8"; transcript_id "ENST00000354336.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRKL-001"; exon_number 3; exon_id "ENSE00001426758.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8733 chr22 HAVANA CDS 21303999 21304130 . + 0 gene_id "ENSG00000099942.8"; transcript_id "ENST00000354336.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRKL-001"; exon_number 3; exon_id "ENSE00001426758.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8734 chr22 HAVANA stop_codon 21304131 21304133 . + 0 gene_id "ENSG00000099942.8"; transcript_id "ENST00000354336.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRKL-001"; exon_number 3; exon_id "ENSE00001426758.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8735 chr22 HAVANA UTR 21271714 21272222 . + . gene_id "ENSG00000099942.8"; transcript_id "ENST00000354336.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRKL-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8736 chr22 HAVANA UTR 21304131 21308037 . + . gene_id "ENSG00000099942.8"; transcript_id "ENST00000354336.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRKL-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8737 chr22 HAVANA transcript 21271722 21308035 . + . gene_id "ENSG00000099942.8"; transcript_id "ENST00000411769.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRKL-002"; level 2; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8738 chr22 HAVANA exon 21271722 21272533 . + . gene_id "ENSG00000099942.8"; transcript_id "ENST00000411769.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRKL-002"; exon_number 1; exon_id "ENSE00001733180.1"; level 2; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8739 chr22 HAVANA CDS 21272223 21272533 . + 0 gene_id "ENSG00000099942.8"; transcript_id "ENST00000411769.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRKL-002"; exon_number 1; exon_id "ENSE00001733180.1"; level 2; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8740 chr22 HAVANA start_codon 21272223 21272225 . + 0 gene_id "ENSG00000099942.8"; transcript_id "ENST00000411769.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRKL-002"; exon_number 1; exon_id "ENSE00001733180.1"; level 2; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8741 chr22 HAVANA exon 21288067 21288532 . + . gene_id "ENSG00000099942.8"; transcript_id "ENST00000411769.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRKL-002"; exon_number 2; exon_id "ENSE00000650961.1"; level 2; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8742 chr22 HAVANA CDS 21288067 21288532 . + 1 gene_id "ENSG00000099942.8"; transcript_id "ENST00000411769.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRKL-002"; exon_number 2; exon_id "ENSE00000650961.1"; level 2; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8743 chr22 HAVANA exon 21303999 21304215 . + . gene_id "ENSG00000099942.8"; transcript_id "ENST00000411769.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRKL-002"; exon_number 3; exon_id "ENSE00001722659.1"; level 2; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8744 chr22 HAVANA CDS 21303999 21304130 . + 0 gene_id "ENSG00000099942.8"; transcript_id "ENST00000411769.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRKL-002"; exon_number 3; exon_id "ENSE00001722659.1"; level 2; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8745 chr22 HAVANA stop_codon 21304131 21304133 . + 0 gene_id "ENSG00000099942.8"; transcript_id "ENST00000411769.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRKL-002"; exon_number 3; exon_id "ENSE00001722659.1"; level 2; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8746 chr22 HAVANA exon 21307494 21308035 . + . gene_id "ENSG00000099942.8"; transcript_id "ENST00000411769.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRKL-002"; exon_number 4; exon_id "ENSE00001748718.1"; level 2; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8747 chr22 HAVANA UTR 21271722 21272222 . + . gene_id "ENSG00000099942.8"; transcript_id "ENST00000411769.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRKL-002"; level 2; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8748 chr22 HAVANA UTR 21304131 21304215 . + . gene_id "ENSG00000099942.8"; transcript_id "ENST00000411769.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRKL-002"; level 2; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8749 chr22 HAVANA UTR 21307494 21308035 . + . gene_id "ENSG00000099942.8"; transcript_id "ENST00000411769.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRKL"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRKL-002"; level 2; tag "CCDS"; ccdsid "CCDS13785.1"; havana_gene "OTTHUMG00000150807.1"; havana_transcript "OTTHUMT00000320159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8750 chr22 ENSEMBL gene 21309449 21309714 . + . gene_id "ENSG00000266366.1"; transcript_id "ENSG00000266366.1"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL389P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL389P"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8751 chr22 ENSEMBL transcript 21309449 21309714 . + . gene_id "ENSG00000266366.1"; transcript_id "ENST00000582413.1"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL389P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL389P-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8752 chr22 ENSEMBL exon 21309449 21309714 . + . gene_id "ENSG00000266366.1"; transcript_id "ENST00000582413.1"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL389P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL389P-201"; exon_number 1; exon_id "ENSE00002710590.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8753 chr22 HAVANA gene 21311380 21318967 . + . gene_id "ENSG00000237476.1"; transcript_id "ENSG00000237476.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B135H6.15"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "XXbac-B135H6.15"; level 1; havana_gene "OTTHUMG00000150805.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8754 chr22 HAVANA transcript 21311380 21318967 . + . gene_id "ENSG00000237476.1"; transcript_id "ENST00000444039.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B135H6.15"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B135H6.15-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150805.1"; havana_transcript "OTTHUMT00000320156.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8755 chr22 HAVANA exon 21311380 21311774 . + . gene_id "ENSG00000237476.1"; transcript_id "ENST00000444039.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B135H6.15"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B135H6.15-001"; exon_number 1; exon_id "ENSE00001612736.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150805.1"; havana_transcript "OTTHUMT00000320156.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8756 chr22 HAVANA exon 21318679 21318967 . + . gene_id "ENSG00000237476.1"; transcript_id "ENST00000444039.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B135H6.15"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B135H6.15-001"; exon_number 2; exon_id "ENSE00001616140.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150805.1"; havana_transcript "OTTHUMT00000320156.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8757 chr22 HAVANA gene 21319396 21335649 . + . gene_id "ENSG00000183773.11"; transcript_id "ENSG00000183773.11"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3"; level 2; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8758 chr22 HAVANA transcript 21319396 21335649 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8759 chr22 HAVANA exon 21319396 21319495 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 1; exon_id "ENSE00001616811.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8760 chr22 HAVANA exon 21322093 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8761 chr22 HAVANA CDS 21322233 21322263 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8762 chr22 HAVANA start_codon 21322233 21322235 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8763 chr22 HAVANA exon 21327596 21327809 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 3; exon_id "ENSE00003690609.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8764 chr22 HAVANA CDS 21327596 21327809 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 3; exon_id "ENSE00003690609.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8765 chr22 HAVANA exon 21328047 21328156 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 4; exon_id "ENSE00003640960.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8766 chr22 HAVANA CDS 21328047 21328156 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 4; exon_id "ENSE00003640960.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8767 chr22 HAVANA exon 21328352 21328461 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 5; exon_id "ENSE00003510245.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8768 chr22 HAVANA CDS 21328352 21328461 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 5; exon_id "ENSE00003510245.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8769 chr22 HAVANA exon 21328541 21328585 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 6; exon_id "ENSE00003459056.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8770 chr22 HAVANA CDS 21328541 21328585 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 6; exon_id "ENSE00003459056.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8771 chr22 HAVANA exon 21328814 21328910 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 7; exon_id "ENSE00003511686.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8772 chr22 HAVANA CDS 21328814 21328910 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 7; exon_id "ENSE00003511686.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8773 chr22 HAVANA exon 21328993 21329105 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 8; exon_id "ENSE00001296842.3"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8774 chr22 HAVANA CDS 21328993 21329105 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 8; exon_id "ENSE00001296842.3"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8775 chr22 HAVANA exon 21329981 21330067 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 9; exon_id "ENSE00003689687.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8776 chr22 HAVANA CDS 21329981 21330067 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 9; exon_id "ENSE00003689687.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8777 chr22 HAVANA exon 21330504 21330595 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 10; exon_id "ENSE00003615716.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8778 chr22 HAVANA CDS 21330504 21330595 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 10; exon_id "ENSE00003615716.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8779 chr22 HAVANA exon 21330697 21330827 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 11; exon_id "ENSE00003671229.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8780 chr22 HAVANA CDS 21330697 21330827 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 11; exon_id "ENSE00003671229.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8781 chr22 HAVANA exon 21330940 21331055 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 12; exon_id "ENSE00003617023.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8782 chr22 HAVANA CDS 21330940 21331055 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 12; exon_id "ENSE00003617023.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8783 chr22 HAVANA exon 21331156 21331227 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 13; exon_id "ENSE00003670753.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8784 chr22 HAVANA CDS 21331156 21331227 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 13; exon_id "ENSE00003670753.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8785 chr22 HAVANA exon 21331321 21331384 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 14; exon_id "ENSE00003521701.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8786 chr22 HAVANA CDS 21331321 21331384 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 14; exon_id "ENSE00003521701.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8787 chr22 HAVANA exon 21331989 21332065 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 15; exon_id "ENSE00003501740.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8788 chr22 HAVANA CDS 21331989 21332065 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 15; exon_id "ENSE00003501740.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8789 chr22 HAVANA exon 21332177 21332294 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 16; exon_id "ENSE00003552534.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8790 chr22 HAVANA CDS 21332177 21332294 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 16; exon_id "ENSE00003552534.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8791 chr22 HAVANA exon 21333560 21333658 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 17; exon_id "ENSE00003460702.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8792 chr22 HAVANA CDS 21333560 21333658 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 17; exon_id "ENSE00003460702.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8793 chr22 HAVANA exon 21333916 21333991 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 18; exon_id "ENSE00003587102.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8794 chr22 HAVANA CDS 21333916 21333991 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 18; exon_id "ENSE00003587102.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8795 chr22 HAVANA exon 21334309 21334413 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 19; exon_id "ENSE00003590512.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8796 chr22 HAVANA CDS 21334309 21334413 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 19; exon_id "ENSE00003590512.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8797 chr22 HAVANA exon 21335036 21335056 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 20; exon_id "ENSE00001313897.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8798 chr22 HAVANA CDS 21335036 21335056 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 20; exon_id "ENSE00001313897.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8799 chr22 HAVANA exon 21335281 21335649 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 21; exon_id "ENSE00001379657.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8800 chr22 HAVANA CDS 21335281 21335317 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 21; exon_id "ENSE00001379657.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8801 chr22 HAVANA stop_codon 21335318 21335320 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; exon_number 21; exon_id "ENSE00001379657.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8802 chr22 HAVANA UTR 21319396 21319495 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8803 chr22 HAVANA UTR 21322093 21322232 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8804 chr22 HAVANA UTR 21335318 21335649 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399167.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320150.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8805 chr22 HAVANA transcript 21319451 21335647 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8806 chr22 HAVANA exon 21319451 21319495 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 1; exon_id "ENSE00001536777.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8807 chr22 HAVANA exon 21322093 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8808 chr22 HAVANA CDS 21322233 21322263 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8809 chr22 HAVANA start_codon 21322233 21322235 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8810 chr22 HAVANA exon 21327596 21327809 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 3; exon_id "ENSE00003690609.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8811 chr22 HAVANA CDS 21327596 21327809 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 3; exon_id "ENSE00003690609.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8812 chr22 HAVANA exon 21328047 21328156 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 4; exon_id "ENSE00003640960.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8813 chr22 HAVANA CDS 21328047 21328156 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 4; exon_id "ENSE00003640960.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8814 chr22 HAVANA exon 21328352 21328461 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 5; exon_id "ENSE00003510245.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8815 chr22 HAVANA CDS 21328352 21328461 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 5; exon_id "ENSE00003510245.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8816 chr22 HAVANA exon 21328541 21328585 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 6; exon_id "ENSE00003459056.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8817 chr22 HAVANA CDS 21328541 21328585 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 6; exon_id "ENSE00003459056.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8818 chr22 HAVANA exon 21328814 21328910 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 7; exon_id "ENSE00003511686.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8819 chr22 HAVANA CDS 21328814 21328910 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 7; exon_id "ENSE00003511686.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8820 chr22 HAVANA exon 21328993 21329105 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 8; exon_id "ENSE00001296842.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8821 chr22 HAVANA CDS 21328993 21329105 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 8; exon_id "ENSE00001296842.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8822 chr22 HAVANA exon 21329981 21330067 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 9; exon_id "ENSE00003689687.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8823 chr22 HAVANA CDS 21329981 21330067 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 9; exon_id "ENSE00003689687.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8824 chr22 HAVANA exon 21330504 21330595 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 10; exon_id "ENSE00003615716.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8825 chr22 HAVANA CDS 21330504 21330595 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 10; exon_id "ENSE00003615716.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8826 chr22 HAVANA exon 21330697 21330827 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 11; exon_id "ENSE00003671229.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8827 chr22 HAVANA CDS 21330697 21330827 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 11; exon_id "ENSE00003671229.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8828 chr22 HAVANA exon 21330940 21331055 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 12; exon_id "ENSE00003617023.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8829 chr22 HAVANA CDS 21330940 21331055 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 12; exon_id "ENSE00003617023.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8830 chr22 HAVANA exon 21331156 21331227 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 13; exon_id "ENSE00003670753.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8831 chr22 HAVANA CDS 21331156 21331227 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 13; exon_id "ENSE00003670753.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8832 chr22 HAVANA exon 21331321 21331384 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 14; exon_id "ENSE00003521701.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8833 chr22 HAVANA CDS 21331321 21331384 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 14; exon_id "ENSE00003521701.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8834 chr22 HAVANA exon 21331989 21332065 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 15; exon_id "ENSE00003501740.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8835 chr22 HAVANA CDS 21331989 21332065 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 15; exon_id "ENSE00003501740.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8836 chr22 HAVANA exon 21332177 21332294 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 16; exon_id "ENSE00003552534.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8837 chr22 HAVANA CDS 21332177 21332294 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 16; exon_id "ENSE00003552534.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8838 chr22 HAVANA exon 21333560 21333658 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 17; exon_id "ENSE00003460702.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8839 chr22 HAVANA CDS 21333560 21333658 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 17; exon_id "ENSE00003460702.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8840 chr22 HAVANA exon 21333916 21333991 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 18; exon_id "ENSE00003587102.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8841 chr22 HAVANA CDS 21333916 21333991 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 18; exon_id "ENSE00003587102.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8842 chr22 HAVANA exon 21334309 21334413 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 19; exon_id "ENSE00003590512.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8843 chr22 HAVANA CDS 21334309 21334413 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 19; exon_id "ENSE00003590512.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8844 chr22 HAVANA exon 21335281 21335647 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 20; exon_id "ENSE00001618630.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8845 chr22 HAVANA CDS 21335281 21335317 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 20; exon_id "ENSE00001618630.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8846 chr22 HAVANA stop_codon 21335318 21335320 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; exon_number 20; exon_id "ENSE00001618630.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8847 chr22 HAVANA UTR 21319451 21319495 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8848 chr22 HAVANA UTR 21322093 21322232 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8849 chr22 HAVANA UTR 21335318 21335647 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000399163.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-003"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320151.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8850 chr22 HAVANA transcript 21319455 21329103 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8851 chr22 HAVANA exon 21319455 21319495 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; exon_number 1; exon_id "ENSE00001536912.2"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8852 chr22 HAVANA exon 21322093 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8853 chr22 HAVANA CDS 21322233 21322263 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8854 chr22 HAVANA start_codon 21322233 21322235 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8855 chr22 HAVANA exon 21327596 21327809 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; exon_number 3; exon_id "ENSE00003690609.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8856 chr22 HAVANA CDS 21327596 21327809 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; exon_number 3; exon_id "ENSE00003690609.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8857 chr22 HAVANA exon 21328352 21328461 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; exon_number 4; exon_id "ENSE00003520616.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8858 chr22 HAVANA CDS 21328352 21328461 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; exon_number 4; exon_id "ENSE00003520616.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8859 chr22 HAVANA exon 21328541 21328585 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; exon_number 5; exon_id "ENSE00003592206.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8860 chr22 HAVANA CDS 21328541 21328548 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; exon_number 5; exon_id "ENSE00003592206.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8861 chr22 HAVANA stop_codon 21328549 21328551 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; exon_number 5; exon_id "ENSE00003592206.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8862 chr22 HAVANA exon 21328814 21328910 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; exon_number 6; exon_id "ENSE00003563205.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8863 chr22 HAVANA exon 21328993 21329103 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; exon_number 7; exon_id "ENSE00001753502.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8864 chr22 HAVANA UTR 21319455 21319495 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8865 chr22 HAVANA UTR 21322093 21322232 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8866 chr22 HAVANA UTR 21328549 21328585 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8867 chr22 HAVANA UTR 21328814 21328910 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8868 chr22 HAVANA UTR 21328993 21329103 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000417515.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-007"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320155.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8869 chr22 HAVANA transcript 21319460 21327934 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000467926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-008"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320231.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8870 chr22 HAVANA exon 21319460 21319495 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000467926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-008"; exon_number 1; exon_id "ENSE00001738365.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320231.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8871 chr22 HAVANA exon 21322093 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000467926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-008"; exon_number 2; exon_id "ENSE00003482198.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320231.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8872 chr22 HAVANA exon 21327596 21327934 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000467926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-008"; exon_number 3; exon_id "ENSE00001906190.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320231.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8873 chr22 HAVANA transcript 21319460 21328385 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8874 chr22 HAVANA exon 21319460 21319495 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; exon_number 1; exon_id "ENSE00001738365.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8875 chr22 HAVANA exon 21320794 21320834 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; exon_number 2; exon_id "ENSE00001926569.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8876 chr22 HAVANA exon 21322093 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; exon_number 3; exon_id "ENSE00003469659.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8877 chr22 HAVANA CDS 21322233 21322263 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; exon_number 3; exon_id "ENSE00003469659.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8878 chr22 HAVANA start_codon 21322233 21322235 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; exon_number 3; exon_id "ENSE00003469659.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8879 chr22 HAVANA exon 21327596 21327809 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; exon_number 4; exon_id "ENSE00003690609.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8880 chr22 HAVANA CDS 21327596 21327809 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; exon_number 4; exon_id "ENSE00003690609.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8881 chr22 HAVANA exon 21328047 21328156 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; exon_number 5; exon_id "ENSE00003640960.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8882 chr22 HAVANA CDS 21328047 21328156 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; exon_number 5; exon_id "ENSE00003640960.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8883 chr22 HAVANA exon 21328352 21328385 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; exon_number 6; exon_id "ENSE00003657248.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8884 chr22 HAVANA CDS 21328352 21328385 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; exon_number 6; exon_id "ENSE00003657248.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8885 chr22 HAVANA UTR 21319460 21319495 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8886 chr22 HAVANA UTR 21320794 21320834 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8887 chr22 HAVANA UTR 21322093 21322232 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000441376.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320232.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8888 chr22 HAVANA transcript 21319465 21321324 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000479523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-010"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320233.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8889 chr22 HAVANA exon 21319465 21319495 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000479523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-010"; exon_number 1; exon_id "ENSE00001865244.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320233.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8890 chr22 HAVANA exon 21320794 21321324 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000479523.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-010"; exon_number 2; exon_id "ENSE00001853480.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320233.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8891 chr22 HAVANA transcript 21319465 21327908 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000472575.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-011"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320234.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8892 chr22 HAVANA exon 21319465 21319495 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000472575.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-011"; exon_number 1; exon_id "ENSE00001865244.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320234.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8893 chr22 HAVANA exon 21320794 21320834 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000472575.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-011"; exon_number 2; exon_id "ENSE00001926569.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320234.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8894 chr22 HAVANA exon 21322093 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000472575.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-011"; exon_number 3; exon_id "ENSE00003482198.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320234.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8895 chr22 HAVANA exon 21327596 21327908 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000472575.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-011"; exon_number 4; exon_id "ENSE00001879421.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320234.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8896 chr22 HAVANA transcript 21319556 21321086 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000495869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-012"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320235.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8897 chr22 HAVANA exon 21319556 21319763 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000495869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-012"; exon_number 1; exon_id "ENSE00001811749.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320235.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8898 chr22 HAVANA exon 21320794 21321086 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000495869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-012"; exon_number 2; exon_id "ENSE00001842343.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320235.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8899 chr22 HAVANA transcript 21321447 21330505 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8900 chr22 HAVANA exon 21321447 21321591 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 1; exon_id "ENSE00001599781.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8901 chr22 HAVANA exon 21322093 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8902 chr22 HAVANA CDS 21322233 21322263 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8903 chr22 HAVANA start_codon 21322233 21322235 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8904 chr22 HAVANA exon 21327596 21327809 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 3; exon_id "ENSE00003690609.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8905 chr22 HAVANA CDS 21327596 21327809 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 3; exon_id "ENSE00003690609.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8906 chr22 HAVANA exon 21328047 21328156 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 4; exon_id "ENSE00003640960.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8907 chr22 HAVANA CDS 21328047 21328156 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 4; exon_id "ENSE00003640960.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8908 chr22 HAVANA exon 21328352 21328461 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 5; exon_id "ENSE00003510245.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8909 chr22 HAVANA CDS 21328352 21328461 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 5; exon_id "ENSE00003510245.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8910 chr22 HAVANA exon 21328541 21328585 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 6; exon_id "ENSE00003459056.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8911 chr22 HAVANA CDS 21328541 21328585 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 6; exon_id "ENSE00003459056.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8912 chr22 HAVANA exon 21328814 21328910 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 7; exon_id "ENSE00003511686.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8913 chr22 HAVANA CDS 21328814 21328910 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 7; exon_id "ENSE00003511686.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8914 chr22 HAVANA exon 21328993 21329105 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 8; exon_id "ENSE00001296842.3"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8915 chr22 HAVANA CDS 21328993 21329105 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 8; exon_id "ENSE00001296842.3"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8916 chr22 HAVANA exon 21329981 21330067 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 9; exon_id "ENSE00003689687.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8917 chr22 HAVANA CDS 21329981 21330067 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 9; exon_id "ENSE00003689687.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8918 chr22 HAVANA exon 21330504 21330505 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; exon_number 10; exon_id "ENSE00001626814.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8919 chr22 HAVANA UTR 21321447 21321591 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8920 chr22 HAVANA UTR 21322093 21322232 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8921 chr22 HAVANA UTR 21330504 21330505 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000434714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-014"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8922 chr22 HAVANA transcript 21321536 21328385 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8923 chr22 HAVANA exon 21321536 21321591 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; exon_number 1; exon_id "ENSE00001658693.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8924 chr22 HAVANA exon 21322093 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8925 chr22 HAVANA CDS 21322233 21322263 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8926 chr22 HAVANA start_codon 21322233 21322235 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8927 chr22 HAVANA exon 21327660 21327809 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; exon_number 3; exon_id "ENSE00001664859.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8928 chr22 HAVANA CDS 21327660 21327809 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; exon_number 3; exon_id "ENSE00001664859.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8929 chr22 HAVANA exon 21328047 21328156 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; exon_number 4; exon_id "ENSE00003492948.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8930 chr22 HAVANA CDS 21328047 21328087 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; exon_number 4; exon_id "ENSE00003492948.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8931 chr22 HAVANA stop_codon 21328088 21328090 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; exon_number 4; exon_id "ENSE00003492948.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8932 chr22 HAVANA exon 21328352 21328385 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; exon_number 5; exon_id "ENSE00003505508.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8933 chr22 HAVANA UTR 21321536 21321591 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8934 chr22 HAVANA UTR 21322093 21322232 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8935 chr22 HAVANA UTR 21328088 21328156 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8936 chr22 HAVANA UTR 21328352 21328385 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000426113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIFM3-015"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8937 chr22 HAVANA transcript 21321537 21328586 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000468124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-016"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320239.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8938 chr22 HAVANA exon 21321537 21321591 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000468124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-016"; exon_number 1; exon_id "ENSE00001837222.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320239.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8939 chr22 HAVANA exon 21322093 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000468124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-016"; exon_number 2; exon_id "ENSE00003482198.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320239.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8940 chr22 HAVANA exon 21327596 21327809 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000468124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-016"; exon_number 3; exon_id "ENSE00003538763.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320239.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8941 chr22 HAVANA exon 21328352 21328461 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000468124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-016"; exon_number 4; exon_id "ENSE00003458480.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320239.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8942 chr22 HAVANA exon 21328541 21328586 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000468124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-016"; exon_number 5; exon_id "ENSE00001852502.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320239.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8943 chr22 HAVANA transcript 21321543 21327967 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000484206.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-017"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320240.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8944 chr22 HAVANA exon 21321543 21321591 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000484206.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-017"; exon_number 1; exon_id "ENSE00001562354.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320240.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8945 chr22 HAVANA exon 21322093 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000484206.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-017"; exon_number 2; exon_id "ENSE00003482198.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320240.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8946 chr22 HAVANA exon 21327596 21327967 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000484206.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-017"; exon_number 3; exon_id "ENSE00001842563.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320240.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8947 chr22 HAVANA transcript 21321543 21335649 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8948 chr22 HAVANA exon 21321543 21321591 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 1; exon_id "ENSE00001562354.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8949 chr22 HAVANA exon 21322093 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8950 chr22 HAVANA CDS 21322233 21322263 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8951 chr22 HAVANA start_codon 21322233 21322235 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 2; exon_id "ENSE00003469659.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8952 chr22 HAVANA exon 21327578 21327809 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 3; exon_id "ENSE00001564330.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8953 chr22 HAVANA CDS 21327578 21327809 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 3; exon_id "ENSE00001564330.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8954 chr22 HAVANA exon 21328047 21328156 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 4; exon_id "ENSE00003640960.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8955 chr22 HAVANA CDS 21328047 21328156 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 4; exon_id "ENSE00003640960.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8956 chr22 HAVANA exon 21328352 21328461 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 5; exon_id "ENSE00003510245.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8957 chr22 HAVANA CDS 21328352 21328461 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 5; exon_id "ENSE00003510245.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8958 chr22 HAVANA exon 21328541 21328585 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 6; exon_id "ENSE00003459056.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8959 chr22 HAVANA CDS 21328541 21328585 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 6; exon_id "ENSE00003459056.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8960 chr22 HAVANA exon 21328814 21328910 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 7; exon_id "ENSE00003511686.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8961 chr22 HAVANA CDS 21328814 21328910 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 7; exon_id "ENSE00003511686.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8962 chr22 HAVANA exon 21328993 21329105 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 8; exon_id "ENSE00001296842.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8963 chr22 HAVANA CDS 21328993 21329105 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 8; exon_id "ENSE00001296842.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8964 chr22 HAVANA exon 21329981 21330067 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 9; exon_id "ENSE00003689687.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8965 chr22 HAVANA CDS 21329981 21330067 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 9; exon_id "ENSE00003689687.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8966 chr22 HAVANA exon 21330504 21330595 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 10; exon_id "ENSE00003615716.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8967 chr22 HAVANA CDS 21330504 21330595 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 10; exon_id "ENSE00003615716.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8968 chr22 HAVANA exon 21330697 21330827 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 11; exon_id "ENSE00003671229.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8969 chr22 HAVANA CDS 21330697 21330827 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 11; exon_id "ENSE00003671229.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8970 chr22 HAVANA exon 21330940 21331055 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 12; exon_id "ENSE00003617023.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8971 chr22 HAVANA CDS 21330940 21331055 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 12; exon_id "ENSE00003617023.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
8972 chr22 HAVANA exon 21331156 21331227 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 13; exon_id "ENSE00003670753.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8973 chr22 HAVANA CDS 21331156 21331227 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 13; exon_id "ENSE00003670753.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8974 chr22 HAVANA exon 21331321 21331384 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 14; exon_id "ENSE00003521701.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8975 chr22 HAVANA CDS 21331321 21331384 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 14; exon_id "ENSE00003521701.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8976 chr22 HAVANA exon 21331989 21332065 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 15; exon_id "ENSE00003501740.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8977 chr22 HAVANA CDS 21331989 21332065 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 15; exon_id "ENSE00003501740.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8978 chr22 HAVANA exon 21332177 21332294 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 16; exon_id "ENSE00003552534.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8979 chr22 HAVANA CDS 21332177 21332294 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 16; exon_id "ENSE00003552534.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8980 chr22 HAVANA exon 21333560 21333658 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 17; exon_id "ENSE00003460702.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8981 chr22 HAVANA CDS 21333560 21333658 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 17; exon_id "ENSE00003460702.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8982 chr22 HAVANA exon 21333916 21333991 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 18; exon_id "ENSE00003587102.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8983 chr22 HAVANA CDS 21333916 21333991 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 18; exon_id "ENSE00003587102.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8984 chr22 HAVANA exon 21334309 21334413 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 19; exon_id "ENSE00003590512.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8985 chr22 HAVANA CDS 21334309 21334413 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 19; exon_id "ENSE00003590512.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8986 chr22 HAVANA exon 21335281 21335649 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 20; exon_id "ENSE00001379657.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8987 chr22 HAVANA CDS 21335281 21335317 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 20; exon_id "ENSE00001379657.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8988 chr22 HAVANA stop_codon 21335318 21335320 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; exon_number 20; exon_id "ENSE00001379657.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8989 chr22 HAVANA UTR 21321543 21321591 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8990 chr22 HAVANA UTR 21322093 21322232 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8991 chr22 HAVANA UTR 21335318 21335649 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000405089.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS54503.1"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320149.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8992 chr22 HAVANA transcript 21321551 21328556 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000496097.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-018"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320241.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8993 chr22 HAVANA exon 21321551 21321591 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000496097.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-018"; exon_number 1; exon_id "ENSE00001910515.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320241.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8994 chr22 HAVANA exon 21322081 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000496097.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-018"; exon_number 2; exon_id "ENSE00001824112.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320241.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8995 chr22 HAVANA exon 21327596 21327809 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000496097.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-018"; exon_number 3; exon_id "ENSE00003538763.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320241.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8996 chr22 HAVANA exon 21328352 21328461 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000496097.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-018"; exon_number 4; exon_id "ENSE00003458480.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320241.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8997 chr22 HAVANA exon 21328541 21328556 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000496097.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-018"; exon_number 5; exon_id "ENSE00001867857.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320241.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8998 chr22 ENSEMBL transcript 21321551 21335609 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
8999 chr22 ENSEMBL exon 21321551 21321591 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 1; exon_id "ENSE00001910515.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9000 chr22 ENSEMBL exon 21322093 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 2; exon_id "ENSE00003680183.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9001 chr22 ENSEMBL CDS 21322159 21322263 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 2; exon_id "ENSE00003680183.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9002 chr22 ENSEMBL start_codon 21322159 21322161 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 2; exon_id "ENSE00003680183.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9003 chr22 ENSEMBL exon 21327596 21327809 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 3; exon_id "ENSE00003547667.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9004 chr22 ENSEMBL CDS 21327596 21327809 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 3; exon_id "ENSE00003547667.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9005 chr22 ENSEMBL exon 21328352 21328461 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 4; exon_id "ENSE00003510245.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9006 chr22 ENSEMBL CDS 21328352 21328461 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 4; exon_id "ENSE00003510245.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9007 chr22 ENSEMBL exon 21328541 21328585 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 5; exon_id "ENSE00003459056.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9008 chr22 ENSEMBL CDS 21328541 21328585 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 5; exon_id "ENSE00003459056.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9009 chr22 ENSEMBL exon 21328814 21328910 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 6; exon_id "ENSE00003511686.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9010 chr22 ENSEMBL CDS 21328814 21328910 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 6; exon_id "ENSE00003511686.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9011 chr22 ENSEMBL exon 21328993 21329105 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 7; exon_id "ENSE00001296842.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9012 chr22 ENSEMBL CDS 21328993 21329105 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 7; exon_id "ENSE00001296842.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9013 chr22 ENSEMBL exon 21329981 21330067 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 8; exon_id "ENSE00003689687.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9014 chr22 ENSEMBL CDS 21329981 21330067 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 8; exon_id "ENSE00003689687.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9015 chr22 ENSEMBL exon 21330504 21330595 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 9; exon_id "ENSE00003615716.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9016 chr22 ENSEMBL CDS 21330504 21330595 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 9; exon_id "ENSE00003615716.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9017 chr22 ENSEMBL exon 21330697 21330827 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 10; exon_id "ENSE00003671229.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9018 chr22 ENSEMBL CDS 21330697 21330827 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 10; exon_id "ENSE00003671229.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9019 chr22 ENSEMBL exon 21330940 21331055 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 11; exon_id "ENSE00003617023.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9020 chr22 ENSEMBL CDS 21330940 21331055 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 11; exon_id "ENSE00003617023.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9021 chr22 ENSEMBL exon 21331156 21331227 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 12; exon_id "ENSE00003670753.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9022 chr22 ENSEMBL CDS 21331156 21331227 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 12; exon_id "ENSE00003670753.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9023 chr22 ENSEMBL exon 21331321 21331384 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 13; exon_id "ENSE00003521701.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9024 chr22 ENSEMBL CDS 21331321 21331384 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 13; exon_id "ENSE00003521701.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9025 chr22 ENSEMBL exon 21331989 21332065 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 14; exon_id "ENSE00003501740.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9026 chr22 ENSEMBL CDS 21331989 21332065 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 14; exon_id "ENSE00003501740.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9027 chr22 ENSEMBL exon 21332177 21332294 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 15; exon_id "ENSE00003552534.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9028 chr22 ENSEMBL CDS 21332177 21332294 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 15; exon_id "ENSE00003552534.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9029 chr22 ENSEMBL exon 21333560 21333658 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 16; exon_id "ENSE00003460702.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9030 chr22 ENSEMBL CDS 21333560 21333658 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 16; exon_id "ENSE00003460702.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9031 chr22 ENSEMBL exon 21333916 21333991 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 17; exon_id "ENSE00003587102.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9032 chr22 ENSEMBL CDS 21333916 21333991 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 17; exon_id "ENSE00003587102.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9033 chr22 ENSEMBL exon 21334309 21334413 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 18; exon_id "ENSE00003590512.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9034 chr22 ENSEMBL CDS 21334309 21334413 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 18; exon_id "ENSE00003590512.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9035 chr22 ENSEMBL exon 21335281 21335609 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 19; exon_id "ENSE00002312409.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9036 chr22 ENSEMBL CDS 21335281 21335317 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 19; exon_id "ENSE00002312409.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9037 chr22 ENSEMBL stop_codon 21335318 21335320 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; exon_number 19; exon_id "ENSE00002312409.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9038 chr22 ENSEMBL UTR 21321551 21321591 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9039 chr22 ENSEMBL UTR 21322093 21322158 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9040 chr22 ENSEMBL UTR 21335318 21335609 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000335375.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9041 chr22 ENSEMBL transcript 21322090 21335610 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9042 chr22 ENSEMBL exon 21322090 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 1; exon_id "ENSE00002700934.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9043 chr22 ENSEMBL CDS 21322233 21322263 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 1; exon_id "ENSE00002700934.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9044 chr22 ENSEMBL start_codon 21322233 21322235 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 1; exon_id "ENSE00002700934.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9045 chr22 ENSEMBL exon 21327596 21327809 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 2; exon_id "ENSE00003690609.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9046 chr22 ENSEMBL CDS 21327596 21327809 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 2; exon_id "ENSE00003690609.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9047 chr22 ENSEMBL exon 21328047 21328156 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 3; exon_id "ENSE00003640960.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9048 chr22 ENSEMBL CDS 21328047 21328156 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 3; exon_id "ENSE00003640960.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9049 chr22 ENSEMBL exon 21328352 21328461 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 4; exon_id "ENSE00003510245.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9050 chr22 ENSEMBL CDS 21328352 21328461 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 4; exon_id "ENSE00003510245.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9051 chr22 ENSEMBL exon 21328541 21328585 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 5; exon_id "ENSE00003459056.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9052 chr22 ENSEMBL CDS 21328541 21328585 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 5; exon_id "ENSE00003459056.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9053 chr22 ENSEMBL exon 21328814 21328910 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 6; exon_id "ENSE00003511686.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9054 chr22 ENSEMBL CDS 21328814 21328910 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 6; exon_id "ENSE00003511686.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9055 chr22 ENSEMBL exon 21328993 21329105 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 7; exon_id "ENSE00001296842.3"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9056 chr22 ENSEMBL CDS 21328993 21329105 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 7; exon_id "ENSE00001296842.3"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9057 chr22 ENSEMBL exon 21329981 21330067 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 8; exon_id "ENSE00003689687.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9058 chr22 ENSEMBL CDS 21329981 21330067 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 8; exon_id "ENSE00003689687.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9059 chr22 ENSEMBL exon 21330504 21330595 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 9; exon_id "ENSE00003615716.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9060 chr22 ENSEMBL CDS 21330504 21330595 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 9; exon_id "ENSE00003615716.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9061 chr22 ENSEMBL exon 21330697 21330827 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 10; exon_id "ENSE00003671229.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9062 chr22 ENSEMBL CDS 21330697 21330827 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 10; exon_id "ENSE00003671229.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9063 chr22 ENSEMBL exon 21330940 21331055 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 11; exon_id "ENSE00003617023.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9064 chr22 ENSEMBL CDS 21330940 21331055 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 11; exon_id "ENSE00003617023.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9065 chr22 ENSEMBL exon 21331156 21331227 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 12; exon_id "ENSE00003670753.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9066 chr22 ENSEMBL CDS 21331156 21331227 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 12; exon_id "ENSE00003670753.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9067 chr22 ENSEMBL exon 21331321 21331384 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 13; exon_id "ENSE00003521701.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9068 chr22 ENSEMBL CDS 21331321 21331384 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 13; exon_id "ENSE00003521701.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9069 chr22 ENSEMBL exon 21331989 21332065 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 14; exon_id "ENSE00003501740.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9070 chr22 ENSEMBL CDS 21331989 21332065 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 14; exon_id "ENSE00003501740.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9071 chr22 ENSEMBL exon 21332177 21332294 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 15; exon_id "ENSE00003552534.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9072 chr22 ENSEMBL CDS 21332177 21332294 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 15; exon_id "ENSE00003552534.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9073 chr22 ENSEMBL exon 21333560 21333658 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 16; exon_id "ENSE00003460702.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9074 chr22 ENSEMBL CDS 21333560 21333658 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 16; exon_id "ENSE00003460702.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9075 chr22 ENSEMBL exon 21333916 21333991 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 17; exon_id "ENSE00003587102.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9076 chr22 ENSEMBL CDS 21333916 21333991 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 17; exon_id "ENSE00003587102.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9077 chr22 ENSEMBL exon 21334309 21334413 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 18; exon_id "ENSE00003590512.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9078 chr22 ENSEMBL CDS 21334309 21334413 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 18; exon_id "ENSE00003590512.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9079 chr22 ENSEMBL exon 21335036 21335056 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 19; exon_id "ENSE00001313897.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9080 chr22 ENSEMBL CDS 21335036 21335056 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 19; exon_id "ENSE00001313897.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9081 chr22 ENSEMBL exon 21335281 21335610 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 20; exon_id "ENSE00002209441.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9082 chr22 ENSEMBL CDS 21335281 21335317 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 20; exon_id "ENSE00002209441.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9083 chr22 ENSEMBL stop_codon 21335318 21335320 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; exon_number 20; exon_id "ENSE00002209441.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9084 chr22 ENSEMBL UTR 21322090 21322232 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9085 chr22 ENSEMBL UTR 21335318 21335610 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000440238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-203"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13786.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9086 chr22 ENSEMBL transcript 21322090 21335610 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9087 chr22 ENSEMBL exon 21322090 21322263 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 1; exon_id "ENSE00002700934.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9088 chr22 ENSEMBL CDS 21322233 21322263 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 1; exon_id "ENSE00002700934.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9089 chr22 ENSEMBL start_codon 21322233 21322235 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 1; exon_id "ENSE00002700934.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9090 chr22 ENSEMBL exon 21327596 21327809 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 2; exon_id "ENSE00003690609.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9091 chr22 ENSEMBL CDS 21327596 21327809 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 2; exon_id "ENSE00003690609.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9092 chr22 ENSEMBL exon 21328047 21328156 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 3; exon_id "ENSE00003640960.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9093 chr22 ENSEMBL CDS 21328047 21328156 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 3; exon_id "ENSE00003640960.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9094 chr22 ENSEMBL exon 21328352 21328461 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 4; exon_id "ENSE00003510245.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9095 chr22 ENSEMBL CDS 21328352 21328461 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 4; exon_id "ENSE00003510245.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9096 chr22 ENSEMBL exon 21328541 21328585 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 5; exon_id "ENSE00003459056.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9097 chr22 ENSEMBL CDS 21328541 21328585 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 5; exon_id "ENSE00003459056.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9098 chr22 ENSEMBL exon 21328814 21328910 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 6; exon_id "ENSE00003511686.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9099 chr22 ENSEMBL CDS 21328814 21328910 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 6; exon_id "ENSE00003511686.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9100 chr22 ENSEMBL exon 21328993 21329105 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 7; exon_id "ENSE00001296842.3"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9101 chr22 ENSEMBL CDS 21328993 21329105 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 7; exon_id "ENSE00001296842.3"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9102 chr22 ENSEMBL exon 21329981 21330067 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 8; exon_id "ENSE00003689687.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9103 chr22 ENSEMBL CDS 21329981 21330067 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 8; exon_id "ENSE00003689687.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9104 chr22 ENSEMBL exon 21330504 21330595 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 9; exon_id "ENSE00003615716.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9105 chr22 ENSEMBL CDS 21330504 21330595 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 9; exon_id "ENSE00003615716.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9106 chr22 ENSEMBL exon 21330697 21330827 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 10; exon_id "ENSE00003671229.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9107 chr22 ENSEMBL CDS 21330697 21330827 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 10; exon_id "ENSE00003671229.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9108 chr22 ENSEMBL exon 21330940 21331055 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 11; exon_id "ENSE00003617023.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9109 chr22 ENSEMBL CDS 21330940 21331055 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 11; exon_id "ENSE00003617023.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9110 chr22 ENSEMBL exon 21331156 21331227 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 12; exon_id "ENSE00003670753.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9111 chr22 ENSEMBL CDS 21331156 21331227 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 12; exon_id "ENSE00003670753.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9112 chr22 ENSEMBL exon 21331321 21331384 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 13; exon_id "ENSE00003521701.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9113 chr22 ENSEMBL CDS 21331321 21331384 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 13; exon_id "ENSE00003521701.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9114 chr22 ENSEMBL exon 21331989 21332065 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 14; exon_id "ENSE00003501740.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9115 chr22 ENSEMBL CDS 21331989 21332065 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 14; exon_id "ENSE00003501740.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9116 chr22 ENSEMBL exon 21332177 21332294 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 15; exon_id "ENSE00003552534.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9117 chr22 ENSEMBL CDS 21332177 21332294 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 15; exon_id "ENSE00003552534.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
9118 chr22 ENSEMBL exon 21333560 21333658 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 16; exon_id "ENSE00003460702.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9119 chr22 ENSEMBL CDS 21333560 21333658 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 16; exon_id "ENSE00003460702.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9120 chr22 ENSEMBL exon 21333916 21333991 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 17; exon_id "ENSE00003587102.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9121 chr22 ENSEMBL CDS 21333916 21333991 . + 2 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 17; exon_id "ENSE00003587102.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9122 chr22 ENSEMBL exon 21334309 21334413 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 18; exon_id "ENSE00003590512.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9123 chr22 ENSEMBL CDS 21334309 21334413 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 18; exon_id "ENSE00003590512.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9124 chr22 ENSEMBL exon 21335281 21335610 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 19; exon_id "ENSE00002209441.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9125 chr22 ENSEMBL CDS 21335281 21335317 . + 1 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 19; exon_id "ENSE00002209441.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9126 chr22 ENSEMBL stop_codon 21335318 21335320 . + 0 gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; exon_number 19; exon_id "ENSE00002209441.1"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9127 chr22 ENSEMBL UTR 21322090 21322232 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9128 chr22 ENSEMBL UTR 21335318 21335610 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000333607.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIFM3-201"; level 3; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS33605.1"; havana_gene "OTTHUMG00000150804.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9129 chr22 HAVANA transcript 21328802 21335637 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9130 chr22 HAVANA exon 21328802 21328910 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; exon_number 1; exon_id "ENSE00001880221.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9131 chr22 HAVANA exon 21329017 21329105 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; exon_number 2; exon_id "ENSE00001953756.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9132 chr22 HAVANA exon 21329981 21330067 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; exon_number 3; exon_id "ENSE00003609863.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9133 chr22 HAVANA exon 21330504 21330595 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; exon_number 4; exon_id "ENSE00003459096.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9134 chr22 HAVANA exon 21330697 21330827 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; exon_number 5; exon_id "ENSE00003682349.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9135 chr22 HAVANA exon 21330940 21331055 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; exon_number 6; exon_id "ENSE00003527932.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9136 chr22 HAVANA exon 21331156 21331227 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; exon_number 7; exon_id "ENSE00003560334.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9137 chr22 HAVANA exon 21331321 21331384 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; exon_number 8; exon_id "ENSE00003683058.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9138 chr22 HAVANA exon 21331989 21332065 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; exon_number 9; exon_id "ENSE00003662226.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9139 chr22 HAVANA exon 21332177 21332294 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; exon_number 10; exon_id "ENSE00003509101.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9140 chr22 HAVANA exon 21333560 21333658 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; exon_number 11; exon_id "ENSE00003648766.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9141 chr22 HAVANA exon 21333916 21333991 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; exon_number 12; exon_id "ENSE00003587459.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9142 chr22 HAVANA exon 21334309 21334413 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; exon_number 13; exon_id "ENSE00003662595.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9143 chr22 HAVANA exon 21335281 21335637 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000465606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-004"; exon_number 14; exon_id "ENSE00001874021.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320152.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9144 chr22 HAVANA transcript 21329981 21335645 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000483107.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-005"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320153.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9145 chr22 HAVANA exon 21329981 21330067 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000483107.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-005"; exon_number 1; exon_id "ENSE00003609863.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320153.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9146 chr22 HAVANA exon 21330504 21330595 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000483107.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-005"; exon_number 2; exon_id "ENSE00003459096.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320153.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9147 chr22 HAVANA exon 21330697 21330827 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000483107.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-005"; exon_number 3; exon_id "ENSE00003682349.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320153.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9148 chr22 HAVANA exon 21330940 21331055 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000483107.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-005"; exon_number 4; exon_id "ENSE00003527932.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320153.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9149 chr22 HAVANA exon 21331156 21331227 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000483107.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-005"; exon_number 5; exon_id "ENSE00003560334.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320153.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9150 chr22 HAVANA exon 21331321 21331384 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000483107.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-005"; exon_number 6; exon_id "ENSE00003683058.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320153.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9151 chr22 HAVANA exon 21332177 21332294 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000483107.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-005"; exon_number 7; exon_id "ENSE00003509101.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320153.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9152 chr22 HAVANA exon 21333560 21333658 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000483107.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-005"; exon_number 8; exon_id "ENSE00003648766.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320153.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9153 chr22 HAVANA exon 21333916 21333991 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000483107.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-005"; exon_number 9; exon_id "ENSE00003587459.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320153.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9154 chr22 HAVANA exon 21334309 21334413 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000483107.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-005"; exon_number 10; exon_id "ENSE00003662595.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320153.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9155 chr22 HAVANA exon 21335281 21335645 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000483107.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AIFM3-005"; exon_number 11; exon_id "ENSE00001838638.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320153.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9156 chr22 HAVANA transcript 21331162 21335644 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000486003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-006"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320154.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9157 chr22 HAVANA exon 21331162 21332065 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000486003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-006"; exon_number 1; exon_id "ENSE00001924006.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320154.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9158 chr22 HAVANA exon 21332177 21332294 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000486003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-006"; exon_number 2; exon_id "ENSE00003509101.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320154.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9159 chr22 HAVANA exon 21333560 21333658 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000486003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-006"; exon_number 3; exon_id "ENSE00003648766.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320154.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9160 chr22 HAVANA exon 21333916 21335644 . + . gene_id "ENSG00000183773.11"; transcript_id "ENST00000486003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIFM3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIFM3-006"; exon_number 4; exon_id "ENSE00001884330.1"; level 2; havana_gene "OTTHUMG00000150804.3"; havana_transcript "OTTHUMT00000320154.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9161 chr22 HAVANA gene 21333751 21353327 . + . gene_id "ENSG00000099949.14"; transcript_id "ENSG00000099949.14"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1"; level 2; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9162 chr22 HAVANA transcript 21333751 21352410 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9163 chr22 HAVANA exon 21333751 21333991 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 1; exon_id "ENSE00001956037.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9164 chr22 HAVANA exon 21334309 21334413 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 2; exon_id "ENSE00003602534.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9165 chr22 HAVANA exon 21337316 21337378 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 3; exon_id "ENSE00003684970.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9166 chr22 HAVANA exon 21340130 21340186 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 4; exon_id "ENSE00003610355.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9167 chr22 HAVANA exon 21341793 21341872 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 5; exon_id "ENSE00003674945.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9168 chr22 HAVANA exon 21342299 21342407 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 6; exon_id "ENSE00003688790.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9169 chr22 HAVANA exon 21343078 21343161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 7; exon_id "ENSE00003517396.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9170 chr22 HAVANA exon 21343914 21343971 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 8; exon_id "ENSE00003621695.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9171 chr22 HAVANA exon 21344675 21344814 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 9; exon_id "ENSE00003625364.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9172 chr22 HAVANA exon 21345917 21346118 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 10; exon_id "ENSE00003545920.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9173 chr22 HAVANA exon 21346503 21346658 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 11; exon_id "ENSE00003517990.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9174 chr22 HAVANA exon 21347083 21347193 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 12; exon_id "ENSE00003638238.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9175 chr22 HAVANA exon 21347951 21348043 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 13; exon_id "ENSE00003607233.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9176 chr22 HAVANA exon 21348213 21348308 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 14; exon_id "ENSE00003520541.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9177 chr22 HAVANA exon 21348393 21348558 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 15; exon_id "ENSE00003501577.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9178 chr22 HAVANA exon 21348847 21349016 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 16; exon_id "ENSE00003659384.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9179 chr22 HAVANA exon 21349159 21349315 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 17; exon_id "ENSE00003637216.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9180 chr22 HAVANA exon 21350035 21350161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 18; exon_id "ENSE00003480042.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9181 chr22 HAVANA exon 21350252 21350401 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 19; exon_id "ENSE00003520325.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9182 chr22 HAVANA exon 21350985 21351090 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 20; exon_id "ENSE00003575895.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9183 chr22 HAVANA exon 21351175 21351255 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 21; exon_id "ENSE00003533060.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9184 chr22 HAVANA exon 21351521 21352410 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000479606.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-002"; exon_number 22; exon_id "ENSE00001910206.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320388.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9185 chr22 HAVANA transcript 21336302 21353327 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9186 chr22 HAVANA exon 21336302 21336860 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 1; exon_id "ENSE00001877108.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9187 chr22 HAVANA CDS 21336661 21336860 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 1; exon_id "ENSE00001877108.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9188 chr22 HAVANA start_codon 21336661 21336663 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 1; exon_id "ENSE00001877108.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9189 chr22 HAVANA exon 21337316 21337378 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 2; exon_id "ENSE00003619328.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9190 chr22 HAVANA CDS 21337316 21337378 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 2; exon_id "ENSE00003619328.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9191 chr22 HAVANA exon 21340130 21340186 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 3; exon_id "ENSE00003508485.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9192 chr22 HAVANA CDS 21340130 21340186 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 3; exon_id "ENSE00003508485.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9193 chr22 HAVANA exon 21341793 21341872 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 4; exon_id "ENSE00003677839.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9194 chr22 HAVANA CDS 21341793 21341872 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 4; exon_id "ENSE00003677839.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9195 chr22 HAVANA exon 21342299 21342407 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 5; exon_id "ENSE00003470272.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9196 chr22 HAVANA CDS 21342299 21342407 . + 2 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 5; exon_id "ENSE00003470272.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9197 chr22 HAVANA exon 21343078 21343161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 6; exon_id "ENSE00003569152.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9198 chr22 HAVANA CDS 21343078 21343161 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 6; exon_id "ENSE00003569152.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9199 chr22 HAVANA exon 21343914 21343971 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 7; exon_id "ENSE00003673759.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9200 chr22 HAVANA CDS 21343914 21343971 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 7; exon_id "ENSE00003673759.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9201 chr22 HAVANA exon 21344675 21344814 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 8; exon_id "ENSE00003532860.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9202 chr22 HAVANA CDS 21344675 21344814 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 8; exon_id "ENSE00003532860.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9203 chr22 HAVANA exon 21345917 21346118 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 9; exon_id "ENSE00003656947.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9204 chr22 HAVANA CDS 21345917 21346118 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 9; exon_id "ENSE00003656947.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9205 chr22 HAVANA exon 21346503 21346658 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 10; exon_id "ENSE00003660441.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9206 chr22 HAVANA CDS 21346503 21346658 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 10; exon_id "ENSE00003660441.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9207 chr22 HAVANA exon 21347083 21347193 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 11; exon_id "ENSE00003459928.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9208 chr22 HAVANA CDS 21347083 21347193 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 11; exon_id "ENSE00003459928.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9209 chr22 HAVANA exon 21347951 21348043 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 12; exon_id "ENSE00003459800.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9210 chr22 HAVANA CDS 21347951 21348043 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 12; exon_id "ENSE00003459800.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9211 chr22 HAVANA exon 21348213 21348308 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 13; exon_id "ENSE00003623090.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9212 chr22 HAVANA CDS 21348213 21348308 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 13; exon_id "ENSE00003623090.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9213 chr22 HAVANA exon 21348393 21348558 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 14; exon_id "ENSE00003489826.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9214 chr22 HAVANA CDS 21348393 21348558 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 14; exon_id "ENSE00003489826.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9215 chr22 HAVANA exon 21348847 21349016 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 15; exon_id "ENSE00003502709.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9216 chr22 HAVANA CDS 21348847 21349016 . + 2 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 15; exon_id "ENSE00003502709.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9217 chr22 HAVANA exon 21349159 21349315 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 16; exon_id "ENSE00003599943.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9218 chr22 HAVANA CDS 21349159 21349315 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 16; exon_id "ENSE00003599943.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9219 chr22 HAVANA exon 21350035 21350161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 17; exon_id "ENSE00003542765.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9220 chr22 HAVANA CDS 21350035 21350161 . + 2 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 17; exon_id "ENSE00003542765.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9221 chr22 HAVANA exon 21350252 21350401 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 18; exon_id "ENSE00003578472.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9222 chr22 HAVANA CDS 21350252 21350401 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 18; exon_id "ENSE00003578472.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9223 chr22 HAVANA exon 21350985 21351090 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 19; exon_id "ENSE00003636692.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9224 chr22 HAVANA CDS 21350985 21351090 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 19; exon_id "ENSE00003636692.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9225 chr22 HAVANA exon 21351175 21351255 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 20; exon_id "ENSE00003634607.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9226 chr22 HAVANA CDS 21351175 21351255 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 20; exon_id "ENSE00003634607.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9227 chr22 HAVANA exon 21351521 21353327 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 21; exon_id "ENSE00001955803.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9228 chr22 HAVANA CDS 21351521 21351634 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 21; exon_id "ENSE00001955803.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9229 chr22 HAVANA stop_codon 21351635 21351637 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; exon_number 21; exon_id "ENSE00001955803.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9230 chr22 HAVANA UTR 21336302 21336660 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9231 chr22 HAVANA UTR 21351635 21353327 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000215739.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33606.1"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320387.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9232 chr22 HAVANA transcript 21336558 21345974 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9233 chr22 HAVANA exon 21336558 21336860 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; exon_number 1; exon_id "ENSE00001505642.2"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9234 chr22 HAVANA CDS 21336661 21336860 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; exon_number 1; exon_id "ENSE00001505642.2"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9235 chr22 HAVANA start_codon 21336661 21336663 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; exon_number 1; exon_id "ENSE00001505642.2"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9236 chr22 HAVANA exon 21337316 21337378 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; exon_number 2; exon_id "ENSE00003619328.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9237 chr22 HAVANA CDS 21337316 21337378 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; exon_number 2; exon_id "ENSE00003619328.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9238 chr22 HAVANA exon 21340130 21340186 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; exon_number 3; exon_id "ENSE00003508485.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9239 chr22 HAVANA CDS 21340130 21340186 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; exon_number 3; exon_id "ENSE00003508485.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9240 chr22 HAVANA exon 21342299 21342407 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; exon_number 4; exon_id "ENSE00003531145.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9241 chr22 HAVANA CDS 21342299 21342329 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; exon_number 4; exon_id "ENSE00003531145.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9242 chr22 HAVANA stop_codon 21342330 21342332 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; exon_number 4; exon_id "ENSE00003531145.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9243 chr22 HAVANA exon 21343078 21343161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; exon_number 5; exon_id "ENSE00003517396.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9244 chr22 HAVANA exon 21343914 21343971 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; exon_number 6; exon_id "ENSE00003621695.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9245 chr22 HAVANA exon 21344675 21344814 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; exon_number 7; exon_id "ENSE00003625364.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9246 chr22 HAVANA exon 21345917 21345974 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; exon_number 8; exon_id "ENSE00001638148.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9247 chr22 HAVANA UTR 21336558 21336660 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9248 chr22 HAVANA UTR 21342330 21342407 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9249 chr22 HAVANA UTR 21343078 21343161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9250 chr22 HAVANA UTR 21343914 21343971 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9251 chr22 HAVANA UTR 21344675 21344814 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9252 chr22 HAVANA UTR 21345917 21345974 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000414985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-005"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320391.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9253 chr22 HAVANA transcript 21336586 21340203 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000493460.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-006"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320392.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9254 chr22 HAVANA exon 21336586 21336860 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000493460.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-006"; exon_number 1; exon_id "ENSE00001868877.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320392.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9255 chr22 HAVANA exon 21337316 21337378 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000493460.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-006"; exon_number 2; exon_id "ENSE00003684970.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320392.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9256 chr22 HAVANA exon 21340130 21340203 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000493460.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-006"; exon_number 3; exon_id "ENSE00001899633.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320392.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9257 chr22 HAVANA transcript 21336612 21343964 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9258 chr22 HAVANA exon 21336612 21336865 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; exon_number 1; exon_id "ENSE00001675970.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9259 chr22 HAVANA CDS 21336661 21336865 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; exon_number 1; exon_id "ENSE00001675970.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9260 chr22 HAVANA start_codon 21336661 21336663 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; exon_number 1; exon_id "ENSE00001675970.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9261 chr22 HAVANA exon 21337316 21337378 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; exon_number 2; exon_id "ENSE00003639084.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9262 chr22 HAVANA CDS 21337316 21337378 . + 2 gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; exon_number 2; exon_id "ENSE00003639084.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9263 chr22 HAVANA exon 21340130 21340186 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; exon_number 3; exon_id "ENSE00003516696.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9264 chr22 HAVANA CDS 21340130 21340164 . + 2 gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; exon_number 3; exon_id "ENSE00003516696.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9265 chr22 HAVANA stop_codon 21340165 21340167 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; exon_number 3; exon_id "ENSE00003516696.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9266 chr22 HAVANA exon 21341793 21341872 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; exon_number 4; exon_id "ENSE00003674945.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9267 chr22 HAVANA exon 21342299 21342407 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; exon_number 5; exon_id "ENSE00003688790.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9268 chr22 HAVANA exon 21343078 21343161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; exon_number 6; exon_id "ENSE00003517396.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9269 chr22 HAVANA exon 21343914 21343964 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; exon_number 7; exon_id "ENSE00001722362.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9270 chr22 HAVANA UTR 21336612 21336660 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9271 chr22 HAVANA UTR 21340165 21340186 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9272 chr22 HAVANA UTR 21341793 21341872 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9273 chr22 HAVANA UTR 21342299 21342407 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9274 chr22 HAVANA UTR 21343078 21343161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9275 chr22 HAVANA UTR 21343914 21343964 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000443265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-007"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320393.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9276 chr22 ENSEMBL transcript 21336620 21351755 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9277 chr22 ENSEMBL exon 21336620 21336860 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 1; exon_id "ENSE00002319890.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9278 chr22 ENSEMBL CDS 21336661 21336860 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 1; exon_id "ENSE00002319890.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9279 chr22 ENSEMBL start_codon 21336661 21336663 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 1; exon_id "ENSE00002319890.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9280 chr22 ENSEMBL exon 21337316 21337378 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 2; exon_id "ENSE00003619328.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9281 chr22 ENSEMBL CDS 21337316 21337378 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 2; exon_id "ENSE00003619328.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9282 chr22 ENSEMBL exon 21341793 21341872 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 3; exon_id "ENSE00003677839.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9283 chr22 ENSEMBL CDS 21341793 21341872 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 3; exon_id "ENSE00003677839.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9284 chr22 ENSEMBL exon 21342299 21342407 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 4; exon_id "ENSE00003470272.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9285 chr22 ENSEMBL CDS 21342299 21342407 . + 2 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 4; exon_id "ENSE00003470272.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9286 chr22 ENSEMBL exon 21343078 21343161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 5; exon_id "ENSE00003569152.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9287 chr22 ENSEMBL CDS 21343078 21343161 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 5; exon_id "ENSE00003569152.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9288 chr22 ENSEMBL exon 21343914 21343971 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 6; exon_id "ENSE00003673759.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9289 chr22 ENSEMBL CDS 21343914 21343971 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 6; exon_id "ENSE00003673759.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9290 chr22 ENSEMBL exon 21344675 21344814 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 7; exon_id "ENSE00003532860.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9291 chr22 ENSEMBL CDS 21344675 21344814 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 7; exon_id "ENSE00003532860.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9292 chr22 ENSEMBL exon 21345917 21346118 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 8; exon_id "ENSE00003656947.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9293 chr22 ENSEMBL CDS 21345917 21346118 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 8; exon_id "ENSE00003656947.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9294 chr22 ENSEMBL exon 21346503 21346658 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 9; exon_id "ENSE00003660441.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9295 chr22 ENSEMBL CDS 21346503 21346658 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 9; exon_id "ENSE00003660441.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9296 chr22 ENSEMBL exon 21347083 21347193 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 10; exon_id "ENSE00003459928.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9297 chr22 ENSEMBL CDS 21347083 21347193 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 10; exon_id "ENSE00003459928.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9298 chr22 ENSEMBL exon 21347951 21348043 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 11; exon_id "ENSE00003459800.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9299 chr22 ENSEMBL CDS 21347951 21348043 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 11; exon_id "ENSE00003459800.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9300 chr22 ENSEMBL exon 21348213 21348308 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 12; exon_id "ENSE00003623090.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9301 chr22 ENSEMBL CDS 21348213 21348308 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 12; exon_id "ENSE00003623090.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9302 chr22 ENSEMBL exon 21348393 21348558 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 13; exon_id "ENSE00003489826.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9303 chr22 ENSEMBL CDS 21348393 21348558 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 13; exon_id "ENSE00003489826.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9304 chr22 ENSEMBL exon 21348847 21349016 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 14; exon_id "ENSE00003502709.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9305 chr22 ENSEMBL CDS 21348847 21349016 . + 2 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 14; exon_id "ENSE00003502709.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9306 chr22 ENSEMBL exon 21349159 21349315 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 15; exon_id "ENSE00003599943.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9307 chr22 ENSEMBL CDS 21349159 21349315 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 15; exon_id "ENSE00003599943.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9308 chr22 ENSEMBL exon 21350035 21350161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 16; exon_id "ENSE00003542765.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9309 chr22 ENSEMBL CDS 21350035 21350161 . + 2 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 16; exon_id "ENSE00003542765.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9310 chr22 ENSEMBL exon 21350252 21350401 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 17; exon_id "ENSE00003578472.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9311 chr22 ENSEMBL CDS 21350252 21350401 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 17; exon_id "ENSE00003578472.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9312 chr22 ENSEMBL exon 21350985 21351090 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 18; exon_id "ENSE00003636692.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9313 chr22 ENSEMBL CDS 21350985 21351090 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 18; exon_id "ENSE00003636692.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9314 chr22 ENSEMBL exon 21351175 21351255 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 19; exon_id "ENSE00003634607.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9315 chr22 ENSEMBL CDS 21351175 21351255 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 19; exon_id "ENSE00003634607.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9316 chr22 ENSEMBL exon 21351521 21351755 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 20; exon_id "ENSE00001292910.5"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9317 chr22 ENSEMBL CDS 21351521 21351634 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 20; exon_id "ENSE00001292910.5"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9318 chr22 ENSEMBL stop_codon 21351635 21351637 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; exon_number 20; exon_id "ENSE00001292910.5"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9319 chr22 ENSEMBL UTR 21336620 21336660 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9320 chr22 ENSEMBL UTR 21351635 21351755 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000389355.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LZTR1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9321 chr22 HAVANA transcript 21340368 21345968 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000480895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-008"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320394.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9322 chr22 HAVANA exon 21340368 21340463 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000480895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-008"; exon_number 1; exon_id "ENSE00001895764.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320394.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9323 chr22 HAVANA exon 21342299 21342407 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000480895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-008"; exon_number 2; exon_id "ENSE00003688790.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320394.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9324 chr22 HAVANA exon 21343078 21343161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000480895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-008"; exon_number 3; exon_id "ENSE00003517396.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320394.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9325 chr22 HAVANA exon 21343914 21343971 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000480895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-008"; exon_number 4; exon_id "ENSE00003621695.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320394.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9326 chr22 HAVANA exon 21344675 21344814 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000480895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-008"; exon_number 5; exon_id "ENSE00003625364.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320394.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9327 chr22 HAVANA exon 21345917 21345968 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000480895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-008"; exon_number 6; exon_id "ENSE00001854608.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320394.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9328 chr22 HAVANA transcript 21343938 21347137 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000497716.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-009"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320395.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9329 chr22 HAVANA exon 21343938 21343971 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000497716.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-009"; exon_number 1; exon_id "ENSE00001817893.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320395.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9330 chr22 HAVANA exon 21344675 21345258 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000497716.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-009"; exon_number 2; exon_id "ENSE00001813266.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320395.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9331 chr22 HAVANA exon 21345917 21346118 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000497716.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-009"; exon_number 3; exon_id "ENSE00003545920.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320395.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9332 chr22 HAVANA exon 21346503 21346658 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000497716.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-009"; exon_number 4; exon_id "ENSE00003517990.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320395.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9333 chr22 HAVANA exon 21347083 21347137 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000497716.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LZTR1-009"; exon_number 5; exon_id "ENSE00001902919.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320395.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9334 chr22 HAVANA transcript 21346025 21346821 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000461510.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-010"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320396.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9335 chr22 HAVANA exon 21346025 21346118 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000461510.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-010"; exon_number 1; exon_id "ENSE00001912571.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320396.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9336 chr22 HAVANA exon 21346503 21346821 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000461510.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-010"; exon_number 2; exon_id "ENSE00001855194.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320396.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9337 chr22 HAVANA transcript 21346070 21348589 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000492480.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-011"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320397.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9338 chr22 HAVANA exon 21346070 21346118 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000492480.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-011"; exon_number 1; exon_id "ENSE00001902547.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320397.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9339 chr22 HAVANA exon 21346503 21346658 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000492480.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-011"; exon_number 2; exon_id "ENSE00003517990.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320397.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9340 chr22 HAVANA exon 21347083 21347186 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000492480.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-011"; exon_number 3; exon_id "ENSE00001829887.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320397.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9341 chr22 HAVANA exon 21347951 21348043 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000492480.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-011"; exon_number 4; exon_id "ENSE00003607233.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320397.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9342 chr22 HAVANA exon 21348213 21348308 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000492480.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-011"; exon_number 5; exon_id "ENSE00003520541.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320397.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9343 chr22 HAVANA exon 21348393 21348589 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000492480.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-011"; exon_number 6; exon_id "ENSE00001847141.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320397.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9344 chr22 HAVANA transcript 21348516 21350401 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9345 chr22 HAVANA exon 21348516 21348558 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; exon_number 1; exon_id "ENSE00001644496.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9346 chr22 HAVANA CDS 21348516 21348558 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; exon_number 1; exon_id "ENSE00001644496.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9347 chr22 HAVANA start_codon 21348516 21348518 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; exon_number 1; exon_id "ENSE00001644496.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9348 chr22 HAVANA exon 21348963 21349016 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; exon_number 2; exon_id "ENSE00001754008.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9349 chr22 HAVANA CDS 21348963 21349016 . + 2 gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; exon_number 2; exon_id "ENSE00001754008.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9350 chr22 HAVANA exon 21349159 21349315 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; exon_number 3; exon_id "ENSE00003592563.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9351 chr22 HAVANA CDS 21349159 21349315 . + 2 gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; exon_number 3; exon_id "ENSE00003592563.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9352 chr22 HAVANA exon 21349657 21349773 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; exon_number 4; exon_id "ENSE00003576034.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9353 chr22 HAVANA CDS 21349657 21349693 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; exon_number 4; exon_id "ENSE00003576034.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9354 chr22 HAVANA stop_codon 21349694 21349696 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; exon_number 4; exon_id "ENSE00003576034.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9355 chr22 HAVANA exon 21350035 21350161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; exon_number 5; exon_id "ENSE00003480042.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9356 chr22 HAVANA exon 21350252 21350401 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; exon_number 6; exon_id "ENSE00003520325.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9357 chr22 HAVANA UTR 21349694 21349773 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9358 chr22 HAVANA UTR 21350035 21350161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9359 chr22 HAVANA UTR 21350252 21350401 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415354.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-012"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9360 chr22 HAVANA transcript 21348616 21350286 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000495142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-013"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9361 chr22 HAVANA exon 21348616 21349016 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000495142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-013"; exon_number 1; exon_id "ENSE00001908207.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9362 chr22 HAVANA exon 21349159 21349315 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000495142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-013"; exon_number 2; exon_id "ENSE00003637216.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9363 chr22 HAVANA exon 21350035 21350161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000495142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-013"; exon_number 3; exon_id "ENSE00003480042.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9364 chr22 HAVANA exon 21350252 21350286 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000495142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-013"; exon_number 4; exon_id "ENSE00001836181.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9365 chr22 HAVANA transcript 21348766 21350288 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000491432.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-014"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320400.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9366 chr22 HAVANA exon 21348766 21349016 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000491432.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-014"; exon_number 1; exon_id "ENSE00001950423.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320400.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9367 chr22 HAVANA exon 21349204 21349315 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000491432.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-014"; exon_number 2; exon_id "ENSE00001855585.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320400.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9368 chr22 HAVANA exon 21350035 21350161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000491432.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-014"; exon_number 3; exon_id "ENSE00003480042.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320400.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9369 chr22 HAVANA exon 21350252 21350288 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000491432.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-014"; exon_number 4; exon_id "ENSE00001910460.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320400.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9370 chr22 HAVANA transcript 21348950 21351001 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9371 chr22 HAVANA exon 21348950 21349016 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; exon_number 1; exon_id "ENSE00001693205.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9372 chr22 HAVANA CDS 21348950 21349016 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; exon_number 1; exon_id "ENSE00001693205.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9373 chr22 HAVANA exon 21349159 21349315 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; exon_number 2; exon_id "ENSE00003599943.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9374 chr22 HAVANA CDS 21349159 21349315 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; exon_number 2; exon_id "ENSE00003599943.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9375 chr22 HAVANA exon 21349657 21349773 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; exon_number 3; exon_id "ENSE00003507290.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9376 chr22 HAVANA CDS 21349657 21349763 . + 2 gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; exon_number 3; exon_id "ENSE00003507290.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9377 chr22 HAVANA stop_codon 21349764 21349766 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; exon_number 3; exon_id "ENSE00003507290.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9378 chr22 HAVANA exon 21350035 21350161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; exon_number 4; exon_id "ENSE00003480042.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9379 chr22 HAVANA exon 21350252 21350401 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; exon_number 5; exon_id "ENSE00003520325.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9380 chr22 HAVANA exon 21350985 21351001 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; exon_number 6; exon_id "ENSE00001788320.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9381 chr22 HAVANA UTR 21349764 21349773 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9382 chr22 HAVANA UTR 21350035 21350161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9383 chr22 HAVANA UTR 21350252 21350401 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9384 chr22 HAVANA UTR 21350985 21351001 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000439171.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-015"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9385 chr22 HAVANA transcript 21348971 21349678 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000464807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-016"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320402.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9386 chr22 HAVANA exon 21348971 21349016 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000464807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-016"; exon_number 1; exon_id "ENSE00001884005.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320402.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9387 chr22 HAVANA exon 21349159 21349678 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000464807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-016"; exon_number 2; exon_id "ENSE00001844243.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320402.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9388 chr22 HAVANA transcript 21349195 21351830 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9389 chr22 HAVANA exon 21349195 21349315 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; exon_number 1; exon_id "ENSE00001645275.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9390 chr22 HAVANA CDS 21349195 21349315 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; exon_number 1; exon_id "ENSE00001645275.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9391 chr22 HAVANA exon 21350052 21350161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; exon_number 2; exon_id "ENSE00001691295.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9392 chr22 HAVANA CDS 21350052 21350092 . + 2 gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; exon_number 2; exon_id "ENSE00001691295.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9393 chr22 HAVANA stop_codon 21350093 21350095 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; exon_number 2; exon_id "ENSE00001691295.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9394 chr22 HAVANA exon 21350252 21350401 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; exon_number 3; exon_id "ENSE00003520325.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9395 chr22 HAVANA exon 21350985 21351090 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; exon_number 4; exon_id "ENSE00003575895.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9396 chr22 HAVANA exon 21351175 21351255 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; exon_number 5; exon_id "ENSE00003533060.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9397 chr22 HAVANA exon 21351521 21351830 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; exon_number 6; exon_id "ENSE00001740934.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9398 chr22 HAVANA UTR 21350093 21350161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9399 chr22 HAVANA UTR 21350252 21350401 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9400 chr22 HAVANA UTR 21350985 21351090 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9401 chr22 HAVANA UTR 21351175 21351255 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9402 chr22 HAVANA UTR 21351521 21351830 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000452988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "LZTR1-017"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9403 chr22 HAVANA transcript 21349378 21353321 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000463909.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-003"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320389.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9404 chr22 HAVANA exon 21349378 21350161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000463909.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-003"; exon_number 1; exon_id "ENSE00001809687.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320389.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9405 chr22 HAVANA exon 21350252 21351090 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000463909.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-003"; exon_number 2; exon_id "ENSE00001918826.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320389.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9406 chr22 HAVANA exon 21351175 21351255 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000463909.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-003"; exon_number 3; exon_id "ENSE00003533060.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320389.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9407 chr22 HAVANA exon 21351521 21353321 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000463909.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-003"; exon_number 4; exon_id "ENSE00001944916.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320389.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9408 chr22 HAVANA transcript 21350077 21352058 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000498649.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-018"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320404.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9409 chr22 HAVANA exon 21350077 21350161 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000498649.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-018"; exon_number 1; exon_id "ENSE00001928056.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320404.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9410 chr22 HAVANA exon 21350252 21350401 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000498649.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-018"; exon_number 2; exon_id "ENSE00003520325.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320404.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9411 chr22 HAVANA exon 21350985 21351255 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000498649.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-018"; exon_number 3; exon_id "ENSE00001900796.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320404.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9412 chr22 HAVANA exon 21351521 21352058 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000498649.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LZTR1-018"; exon_number 4; exon_id "ENSE00001819376.1"; level 2; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320404.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9413 chr22 HAVANA transcript 21350285 21353274 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LZTR1-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320390.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9414 chr22 HAVANA exon 21350285 21350401 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LZTR1-004"; exon_number 1; exon_id "ENSE00001682030.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320390.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9415 chr22 HAVANA CDS 21350285 21350401 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000415817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LZTR1-004"; exon_number 1; exon_id "ENSE00001682030.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320390.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9416 chr22 HAVANA exon 21350985 21351090 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LZTR1-004"; exon_number 2; exon_id "ENSE00003636692.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320390.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9417 chr22 HAVANA CDS 21350985 21351090 . + 1 gene_id "ENSG00000099949.14"; transcript_id "ENST00000415817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LZTR1-004"; exon_number 2; exon_id "ENSE00003636692.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320390.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9418 chr22 HAVANA exon 21351175 21353274 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LZTR1-004"; exon_number 3; exon_id "ENSE00001793437.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320390.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9419 chr22 HAVANA CDS 21351175 21351423 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000415817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LZTR1-004"; exon_number 3; exon_id "ENSE00001793437.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320390.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9420 chr22 HAVANA stop_codon 21351424 21351426 . + 0 gene_id "ENSG00000099949.14"; transcript_id "ENST00000415817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LZTR1-004"; exon_number 3; exon_id "ENSE00001793437.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320390.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9421 chr22 HAVANA UTR 21351424 21353274 . + . gene_id "ENSG00000099949.14"; transcript_id "ENST00000415817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LZTR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LZTR1-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150878.1"; havana_transcript "OTTHUMT00000320390.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9422 chr22 HAVANA gene 21335650 21336044 . - . gene_id "ENSG00000272829.1"; transcript_id "ENSG00000272829.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B135H6.18"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "XXbac-B135H6.18"; level 2; havana_gene "OTTHUMG00000186195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9423 chr22 HAVANA transcript 21335650 21336044 . - . gene_id "ENSG00000272829.1"; transcript_id "ENST00000610278.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B135H6.18"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B135H6.18-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186195.1"; havana_transcript "OTTHUMT00000472400.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9424 chr22 HAVANA exon 21335650 21336044 . - . gene_id "ENSG00000272829.1"; transcript_id "ENST00000610278.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "XXbac-B135H6.18"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "XXbac-B135H6.18-001"; exon_number 1; exon_id "ENSE00003707911.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186195.1"; havana_transcript "OTTHUMT00000472400.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9425 chr22 HAVANA gene 21353393 21356485 . - . gene_id "ENSG00000184436.7"; transcript_id "ENSG00000184436.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7"; level 2; havana_gene "OTTHUMG00000150879.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9426 chr22 HAVANA transcript 21353393 21356031 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000498406.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-005"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320409.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9427 chr22 HAVANA exon 21355545 21356031 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000498406.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-005"; exon_number 1; exon_id "ENSE00001874831.1"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320409.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9428 chr22 HAVANA exon 21354936 21355076 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000498406.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-005"; exon_number 2; exon_id "ENSE00003636366.1"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320409.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9429 chr22 HAVANA exon 21353393 21354721 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000498406.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-005"; exon_number 3; exon_id "ENSE00001870565.1"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320409.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9430 chr22 HAVANA transcript 21354061 21356375 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000215742.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9431 chr22 HAVANA exon 21356121 21356375 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000215742.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-001"; exon_number 1; exon_id "ENSE00001825528.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9432 chr22 HAVANA CDS 21356121 21356200 . - 0 gene_id "ENSG00000184436.7"; transcript_id "ENST00000215742.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-001"; exon_number 1; exon_id "ENSE00001825528.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9433 chr22 HAVANA start_codon 21356198 21356200 . - 0 gene_id "ENSG00000184436.7"; transcript_id "ENST00000215742.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-001"; exon_number 1; exon_id "ENSE00001825528.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9434 chr22 HAVANA exon 21355545 21355700 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000215742.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-001"; exon_number 2; exon_id "ENSE00000879291.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9435 chr22 HAVANA CDS 21355545 21355700 . - 1 gene_id "ENSG00000184436.7"; transcript_id "ENST00000215742.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-001"; exon_number 2; exon_id "ENSE00000879291.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9436 chr22 HAVANA exon 21354936 21355076 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000215742.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-001"; exon_number 3; exon_id "ENSE00003490417.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9437 chr22 HAVANA CDS 21354936 21355076 . - 1 gene_id "ENSG00000184436.7"; transcript_id "ENST00000215742.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-001"; exon_number 3; exon_id "ENSE00003490417.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9438 chr22 HAVANA exon 21354061 21354721 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000215742.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-001"; exon_number 4; exon_id "ENSE00001899849.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9439 chr22 HAVANA CDS 21354172 21354721 . - 1 gene_id "ENSG00000184436.7"; transcript_id "ENST00000215742.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-001"; exon_number 4; exon_id "ENSE00001899849.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9440 chr22 HAVANA stop_codon 21354169 21354171 . - 0 gene_id "ENSG00000184436.7"; transcript_id "ENST00000215742.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-001"; exon_number 4; exon_id "ENSE00001899849.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9441 chr22 HAVANA UTR 21356201 21356375 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000215742.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9442 chr22 HAVANA UTR 21354061 21354171 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000215742.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9443 chr22 HAVANA transcript 21354062 21356084 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000471073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-004"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320408.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9444 chr22 HAVANA exon 21354936 21356084 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000471073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-004"; exon_number 1; exon_id "ENSE00001916788.1"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320408.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9445 chr22 HAVANA exon 21354062 21354721 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000471073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-004"; exon_number 2; exon_id "ENSE00001814620.1"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320408.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9446 chr22 HAVANA transcript 21354066 21356485 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000399133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-003"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320407.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9447 chr22 HAVANA exon 21356375 21356485 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000399133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-003"; exon_number 1; exon_id "ENSE00001852531.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320407.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9448 chr22 HAVANA exon 21356121 21356200 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000399133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-003"; exon_number 2; exon_id "ENSE00003557425.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320407.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9449 chr22 HAVANA CDS 21356121 21356200 . - 0 gene_id "ENSG00000184436.7"; transcript_id "ENST00000399133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-003"; exon_number 2; exon_id "ENSE00003557425.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320407.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9450 chr22 HAVANA start_codon 21356198 21356200 . - 0 gene_id "ENSG00000184436.7"; transcript_id "ENST00000399133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-003"; exon_number 2; exon_id "ENSE00003557425.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320407.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9451 chr22 HAVANA exon 21355545 21355700 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000399133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-003"; exon_number 3; exon_id "ENSE00000879291.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320407.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9452 chr22 HAVANA CDS 21355545 21355700 . - 1 gene_id "ENSG00000184436.7"; transcript_id "ENST00000399133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-003"; exon_number 3; exon_id "ENSE00000879291.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320407.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9453 chr22 HAVANA exon 21354936 21355076 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000399133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-003"; exon_number 4; exon_id "ENSE00003490417.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320407.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9454 chr22 HAVANA CDS 21354936 21355076 . - 1 gene_id "ENSG00000184436.7"; transcript_id "ENST00000399133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-003"; exon_number 4; exon_id "ENSE00003490417.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320407.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9455 chr22 HAVANA exon 21354066 21354721 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000399133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-003"; exon_number 5; exon_id "ENSE00001910670.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320407.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9456 chr22 HAVANA CDS 21354172 21354721 . - 1 gene_id "ENSG00000184436.7"; transcript_id "ENST00000399133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-003"; exon_number 5; exon_id "ENSE00001910670.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320407.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9457 chr22 HAVANA stop_codon 21354169 21354171 . - 0 gene_id "ENSG00000184436.7"; transcript_id "ENST00000399133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-003"; exon_number 5; exon_id "ENSE00001910670.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320407.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9458 chr22 HAVANA UTR 21356375 21356485 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000399133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-003"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320407.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9459 chr22 HAVANA UTR 21354066 21354171 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000399133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "THAP7-003"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13787.1"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320407.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9460 chr22 HAVANA transcript 21354091 21356395 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000476667.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-002"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320406.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9461 chr22 HAVANA exon 21356121 21356395 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000476667.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-002"; exon_number 1; exon_id "ENSE00001239009.5"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320406.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9462 chr22 HAVANA exon 21354936 21355700 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000476667.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-002"; exon_number 2; exon_id "ENSE00001820686.1"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320406.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9463 chr22 HAVANA exon 21354091 21354721 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000476667.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-002"; exon_number 3; exon_id "ENSE00001884116.1"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320406.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9464 chr22 HAVANA transcript 21354519 21356406 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000466670.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-007"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320411.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9465 chr22 HAVANA exon 21356375 21356406 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000466670.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-007"; exon_number 1; exon_id "ENSE00001536596.2"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320411.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9466 chr22 HAVANA exon 21356121 21356200 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000466670.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-007"; exon_number 2; exon_id "ENSE00003609928.1"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320411.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9467 chr22 HAVANA exon 21354936 21355700 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000466670.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-007"; exon_number 3; exon_id "ENSE00001820686.1"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320411.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9468 chr22 HAVANA exon 21354519 21354721 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000466670.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-007"; exon_number 4; exon_id "ENSE00001861949.1"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320411.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9469 chr22 HAVANA transcript 21354561 21355807 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000488975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-008"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320412.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9470 chr22 HAVANA exon 21355545 21355807 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000488975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-008"; exon_number 1; exon_id "ENSE00001834325.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320412.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9471 chr22 HAVANA exon 21354936 21355018 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000488975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-008"; exon_number 2; exon_id "ENSE00001817077.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320412.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9472 chr22 HAVANA exon 21354561 21354721 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000488975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-008"; exon_number 3; exon_id "ENSE00001907493.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320412.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9473 chr22 HAVANA transcript 21355581 21356407 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000471723.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-006"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320410.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9474 chr22 HAVANA exon 21356375 21356407 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000471723.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-006"; exon_number 1; exon_id "ENSE00001899188.1"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320410.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9475 chr22 HAVANA exon 21355581 21356200 . - . gene_id "ENSG00000184436.7"; transcript_id "ENST00000471723.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "THAP7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "THAP7-006"; exon_number 2; exon_id "ENSE00001831701.1"; level 2; havana_gene "OTTHUMG00000150879.1"; havana_transcript "OTTHUMT00000320410.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9476 chr22 HAVANA gene 21356175 21364631 . + . gene_id "ENSG00000230513.1"; transcript_id "ENSG00000230513.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "THAP7-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "THAP7-AS1"; level 2; havana_gene "OTTHUMG00000150877.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9477 chr22 HAVANA transcript 21356175 21364414 . + . gene_id "ENSG00000230513.1"; transcript_id "ENST00000436079.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "THAP7-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "THAP7-AS1-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150877.1"; havana_transcript "OTTHUMT00000320384.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9478 chr22 HAVANA exon 21356175 21357118 . + . gene_id "ENSG00000230513.1"; transcript_id "ENST00000436079.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "THAP7-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "THAP7-AS1-001"; exon_number 1; exon_id "ENSE00001628956.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150877.1"; havana_transcript "OTTHUMT00000320384.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9479 chr22 HAVANA exon 21363639 21364414 . + . gene_id "ENSG00000230513.1"; transcript_id "ENST00000436079.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "THAP7-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "THAP7-AS1-001"; exon_number 2; exon_id "ENSE00001592472.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150877.1"; havana_transcript "OTTHUMT00000320384.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9480 chr22 HAVANA transcript 21356211 21357561 . + . gene_id "ENSG00000230513.1"; transcript_id "ENST00000429962.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "THAP7-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "THAP7-AS1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150877.1"; havana_transcript "OTTHUMT00000320386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9481 chr22 HAVANA exon 21356211 21357118 . + . gene_id "ENSG00000230513.1"; transcript_id "ENST00000429962.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "THAP7-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "THAP7-AS1-003"; exon_number 1; exon_id "ENSE00001676787.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150877.1"; havana_transcript "OTTHUMT00000320386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9482 chr22 HAVANA exon 21357207 21357561 . + . gene_id "ENSG00000230513.1"; transcript_id "ENST00000429962.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "THAP7-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "THAP7-AS1-003"; exon_number 2; exon_id "ENSE00001778271.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150877.1"; havana_transcript "OTTHUMT00000320386.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9483 chr22 HAVANA transcript 21356497 21364631 . + . gene_id "ENSG00000230513.1"; transcript_id "ENST00000452284.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "THAP7-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "THAP7-AS1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150877.1"; havana_transcript "OTTHUMT00000320385.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9484 chr22 HAVANA exon 21356497 21357118 . + . gene_id "ENSG00000230513.1"; transcript_id "ENST00000452284.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "THAP7-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "THAP7-AS1-002"; exon_number 1; exon_id "ENSE00001782081.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150877.1"; havana_transcript "OTTHUMT00000320385.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9485 chr22 HAVANA exon 21362956 21364631 . + . gene_id "ENSG00000230513.1"; transcript_id "ENST00000452284.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "THAP7-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "THAP7-AS1-002"; exon_number 2; exon_id "ENSE00001658860.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150877.1"; havana_transcript "OTTHUMT00000320385.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9486 chr22 HAVANA gene 21357184 21368581 . - . gene_id "ENSG00000161149.7"; transcript_id "ENSG00000161149.7"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3FP"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "TUBA3FP"; level 2; havana_gene "OTTHUMG00000150876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9487 chr22 HAVANA transcript 21357184 21363742 . - . gene_id "ENSG00000161149.7"; transcript_id "ENST00000442739.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3FP"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "TUBA3FP-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150876.1"; havana_transcript "OTTHUMT00000320381.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9488 chr22 HAVANA exon 21363068 21363742 . - . gene_id "ENSG00000161149.7"; transcript_id "ENST00000442739.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3FP"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "TUBA3FP-001"; exon_number 1; exon_id "ENSE00001641374.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150876.1"; havana_transcript "OTTHUMT00000320381.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9489 chr22 HAVANA exon 21357184 21357466 . - . gene_id "ENSG00000161149.7"; transcript_id "ENST00000442739.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3FP"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "TUBA3FP-001"; exon_number 2; exon_id "ENSE00001703412.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150876.1"; havana_transcript "OTTHUMT00000320381.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9490 chr22 HAVANA transcript 21362482 21368576 . - . gene_id "ENSG00000161149.7"; transcript_id "ENST00000422086.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3FP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TUBA3FP-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150876.1"; havana_transcript "OTTHUMT00000320383.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9491 chr22 HAVANA exon 21368071 21368576 . - . gene_id "ENSG00000161149.7"; transcript_id "ENST00000422086.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3FP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TUBA3FP-003"; exon_number 1; exon_id "ENSE00001315318.8"; level 2; tag "basic"; havana_gene "OTTHUMG00000150876.1"; havana_transcript "OTTHUMT00000320383.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9492 chr22 HAVANA exon 21365673 21365879 . - . gene_id "ENSG00000161149.7"; transcript_id "ENST00000422086.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3FP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TUBA3FP-003"; exon_number 2; exon_id "ENSE00001727218.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150876.1"; havana_transcript "OTTHUMT00000320383.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9493 chr22 HAVANA exon 21362482 21363742 . - . gene_id "ENSG00000161149.7"; transcript_id "ENST00000422086.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3FP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TUBA3FP-003"; exon_number 3; exon_id "ENSE00001690445.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150876.1"; havana_transcript "OTTHUMT00000320383.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9494 chr22 HAVANA transcript 21362926 21368581 . - . gene_id "ENSG00000161149.7"; transcript_id "ENST00000292748.7"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3FP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TUBA3FP-002"; level 2; havana_gene "OTTHUMG00000150876.1"; havana_transcript "OTTHUMT00000320382.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9495 chr22 HAVANA exon 21368071 21368581 . - . gene_id "ENSG00000161149.7"; transcript_id "ENST00000292748.7"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3FP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TUBA3FP-002"; exon_number 1; exon_id "ENSE00001602169.1"; level 2; havana_gene "OTTHUMG00000150876.1"; havana_transcript "OTTHUMT00000320382.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9496 chr22 HAVANA exon 21367331 21367473 . - . gene_id "ENSG00000161149.7"; transcript_id "ENST00000292748.7"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3FP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TUBA3FP-002"; exon_number 2; exon_id "ENSE00001767831.1"; level 2; havana_gene "OTTHUMG00000150876.1"; havana_transcript "OTTHUMT00000320382.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9497 chr22 HAVANA exon 21365673 21365879 . - . gene_id "ENSG00000161149.7"; transcript_id "ENST00000292748.7"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3FP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TUBA3FP-002"; exon_number 3; exon_id "ENSE00001727218.1"; level 2; havana_gene "OTTHUMG00000150876.1"; havana_transcript "OTTHUMT00000320382.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9498 chr22 HAVANA exon 21362926 21363742 . - . gene_id "ENSG00000161149.7"; transcript_id "ENST00000292748.7"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3FP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TUBA3FP-002"; exon_number 4; exon_id "ENSE00001748612.1"; level 2; havana_gene "OTTHUMG00000150876.1"; havana_transcript "OTTHUMT00000320382.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9499 chr22 ENSEMBL gene 21358030 21360736 . - . gene_id "ENSG00000269103.1"; transcript_id "ENSG00000269103.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC002472.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9500 chr22 ENSEMBL transcript 21358030 21360736 . - . gene_id "ENSG00000269103.1"; transcript_id "ENST00000547793.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC002472.1-201"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9501 chr22 ENSEMBL exon 21360568 21360736 . - . gene_id "ENSG00000269103.1"; transcript_id "ENST00000547793.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC002472.1-201"; exon_number 1; exon_id "ENSE00003166572.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9502 chr22 ENSEMBL CDS 21360568 21360736 . - 0 gene_id "ENSG00000269103.1"; transcript_id "ENST00000547793.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC002472.1-201"; exon_number 1; exon_id "ENSE00003166572.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9503 chr22 ENSEMBL exon 21358030 21358052 . - . gene_id "ENSG00000269103.1"; transcript_id "ENST00000547793.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC002472.1-201"; exon_number 2; exon_id "ENSE00002995600.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9504 chr22 ENSEMBL CDS 21358030 21358052 . - 2 gene_id "ENSG00000269103.1"; transcript_id "ENST00000547793.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC002472.1-201"; exon_number 2; exon_id "ENSE00002995600.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9505 chr22 HAVANA gene 21364097 21383119 . + . gene_id "ENSG00000099957.12"; transcript_id "ENSG00000099957.12"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6"; level 2; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9506 chr22 HAVANA transcript 21364097 21372231 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000591411.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "P2RX6-009"; level 2; tag "basic"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000459956.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9507 chr22 HAVANA exon 21364097 21364165 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000591411.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "P2RX6-009"; exon_number 1; exon_id "ENSE00002828546.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000459956.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9508 chr22 HAVANA exon 21370231 21370381 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000591411.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "P2RX6-009"; exon_number 2; exon_id "ENSE00003607003.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000459956.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9509 chr22 HAVANA exon 21372210 21372231 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000591411.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "P2RX6-009"; exon_number 3; exon_id "ENSE00002810344.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000459956.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9510 chr22 HAVANA transcript 21369316 21383119 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9511 chr22 HAVANA exon 21369316 21369627 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 1; exon_id "ENSE00001881723.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9512 chr22 HAVANA CDS 21369464 21369627 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 1; exon_id "ENSE00001881723.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9513 chr22 HAVANA start_codon 21369464 21369466 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 1; exon_id "ENSE00001881723.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9514 chr22 HAVANA exon 21370231 21370381 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 2; exon_id "ENSE00003567732.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9515 chr22 HAVANA CDS 21370231 21370381 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 2; exon_id "ENSE00003567732.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9516 chr22 HAVANA exon 21372278 21372349 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 3; exon_id "ENSE00003610400.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9517 chr22 HAVANA CDS 21372278 21372349 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 3; exon_id "ENSE00003610400.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9518 chr22 HAVANA exon 21376965 21377040 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 4; exon_id "ENSE00003529221.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9519 chr22 HAVANA CDS 21376965 21377040 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 4; exon_id "ENSE00003529221.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9520 chr22 HAVANA exon 21377231 21377324 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 5; exon_id "ENSE00003511006.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9521 chr22 HAVANA CDS 21377231 21377324 . + 2 gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 5; exon_id "ENSE00003511006.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9522 chr22 HAVANA exon 21377407 21377487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 6; exon_id "ENSE00003606892.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9523 chr22 HAVANA CDS 21377407 21377487 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 6; exon_id "ENSE00003606892.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9524 chr22 HAVANA exon 21377564 21377705 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 7; exon_id "ENSE00003685177.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9525 chr22 HAVANA CDS 21377564 21377705 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 7; exon_id "ENSE00003685177.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9526 chr22 HAVANA exon 21377798 21377907 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 8; exon_id "ENSE00003680336.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9527 chr22 HAVANA CDS 21377798 21377907 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 8; exon_id "ENSE00003680336.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9528 chr22 HAVANA exon 21380094 21380187 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 9; exon_id "ENSE00003679555.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9529 chr22 HAVANA CDS 21380094 21380187 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 9; exon_id "ENSE00003679555.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9530 chr22 HAVANA exon 21380300 21380365 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 10; exon_id "ENSE00003641122.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9531 chr22 HAVANA CDS 21380300 21380365 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 10; exon_id "ENSE00003641122.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9532 chr22 HAVANA exon 21380541 21380618 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 11; exon_id "ENSE00003667669.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9533 chr22 HAVANA CDS 21380541 21380618 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 11; exon_id "ENSE00003667669.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9534 chr22 HAVANA exon 21380709 21383119 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 12; exon_id "ENSE00001347509.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9535 chr22 HAVANA CDS 21380709 21380903 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 12; exon_id "ENSE00001347509.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
9536 chr22 HAVANA stop_codon 21380904 21380906 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; exon_number 12; exon_id "ENSE00001347509.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9537 chr22 HAVANA UTR 21369316 21369463 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9538 chr22 HAVANA UTR 21380904 21383119 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000413302.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13788.2"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000319625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9539 chr22 HAVANA transcript 21369442 21382297 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9540 chr22 HAVANA exon 21369442 21369549 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 1; exon_id "ENSE00001603597.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9541 chr22 HAVANA CDS 21369464 21369549 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 1; exon_id "ENSE00001603597.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9542 chr22 HAVANA start_codon 21369464 21369466 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 1; exon_id "ENSE00001603597.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9543 chr22 HAVANA exon 21370231 21370381 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 2; exon_id "ENSE00003567732.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9544 chr22 HAVANA CDS 21370231 21370381 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 2; exon_id "ENSE00003567732.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9545 chr22 HAVANA exon 21377231 21377324 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 3; exon_id "ENSE00003655332.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9546 chr22 HAVANA CDS 21377231 21377233 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 3; exon_id "ENSE00003655332.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9547 chr22 HAVANA stop_codon 21377234 21377236 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 3; exon_id "ENSE00003655332.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9548 chr22 HAVANA exon 21377407 21377487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 4; exon_id "ENSE00003637449.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9549 chr22 HAVANA exon 21377564 21377705 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 5; exon_id "ENSE00003475051.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9550 chr22 HAVANA exon 21377798 21377907 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 6; exon_id "ENSE00003661005.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9551 chr22 HAVANA exon 21380094 21380187 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 7; exon_id "ENSE00003471010.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9552 chr22 HAVANA exon 21380300 21380365 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 8; exon_id "ENSE00003656108.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9553 chr22 HAVANA exon 21380541 21380618 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 9; exon_id "ENSE00003618304.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9554 chr22 HAVANA exon 21380709 21382297 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; exon_number 10; exon_id "ENSE00001706273.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9555 chr22 HAVANA UTR 21369442 21369463 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9556 chr22 HAVANA UTR 21377234 21377324 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9557 chr22 HAVANA UTR 21377407 21377487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9558 chr22 HAVANA UTR 21377564 21377705 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9559 chr22 HAVANA UTR 21377798 21377907 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9560 chr22 HAVANA UTR 21380094 21380187 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9561 chr22 HAVANA UTR 21380300 21380365 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9562 chr22 HAVANA UTR 21380541 21380618 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9563 chr22 HAVANA UTR 21380709 21382297 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000442475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-002"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320426.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9564 chr22 ENSEMBL transcript 21369442 21382296 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9565 chr22 ENSEMBL exon 21369442 21369549 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 1; exon_id "ENSE00001603597.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9566 chr22 ENSEMBL CDS 21369494 21369549 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 1; exon_id "ENSE00001603597.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9567 chr22 ENSEMBL start_codon 21369494 21369496 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 1; exon_id "ENSE00001603597.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9568 chr22 ENSEMBL exon 21370231 21370381 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 2; exon_id "ENSE00003567732.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9569 chr22 ENSEMBL CDS 21370231 21370381 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 2; exon_id "ENSE00003567732.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9570 chr22 ENSEMBL exon 21377231 21377324 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 3; exon_id "ENSE00003655332.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9571 chr22 ENSEMBL CDS 21377231 21377233 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 3; exon_id "ENSE00003655332.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9572 chr22 ENSEMBL stop_codon 21377234 21377236 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 3; exon_id "ENSE00003655332.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9573 chr22 ENSEMBL exon 21377407 21377487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 4; exon_id "ENSE00003637449.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9574 chr22 ENSEMBL exon 21377564 21377705 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 5; exon_id "ENSE00003475051.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9575 chr22 ENSEMBL exon 21377798 21377907 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 6; exon_id "ENSE00003661005.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9576 chr22 ENSEMBL exon 21380094 21380187 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 7; exon_id "ENSE00003471010.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9577 chr22 ENSEMBL exon 21380300 21380365 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 8; exon_id "ENSE00003656108.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9578 chr22 ENSEMBL exon 21380541 21380618 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 9; exon_id "ENSE00003618304.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9579 chr22 ENSEMBL exon 21380709 21382296 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; exon_number 10; exon_id "ENSE00002224503.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9580 chr22 ENSEMBL UTR 21369442 21369493 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9581 chr22 ENSEMBL UTR 21377234 21377324 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9582 chr22 ENSEMBL UTR 21377407 21377487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9583 chr22 ENSEMBL UTR 21377564 21377705 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9584 chr22 ENSEMBL UTR 21377798 21377907 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9585 chr22 ENSEMBL UTR 21380094 21380187 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9586 chr22 ENSEMBL UTR 21380300 21380365 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9587 chr22 ENSEMBL UTR 21380541 21380618 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9588 chr22 ENSEMBL UTR 21380709 21382296 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000402329.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9589 chr22 ENSEMBL transcript 21369449 21383119 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9590 chr22 ENSEMBL exon 21369449 21369627 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 1; exon_id "ENSE00000879297.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9591 chr22 ENSEMBL CDS 21369494 21369627 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 1; exon_id "ENSE00000879297.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9592 chr22 ENSEMBL start_codon 21369494 21369496 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 1; exon_id "ENSE00000879297.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9593 chr22 ENSEMBL exon 21370231 21370381 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 2; exon_id "ENSE00003567732.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9594 chr22 ENSEMBL CDS 21370231 21370381 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 2; exon_id "ENSE00003567732.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9595 chr22 ENSEMBL exon 21372278 21372349 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 3; exon_id "ENSE00003610400.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9596 chr22 ENSEMBL CDS 21372278 21372349 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 3; exon_id "ENSE00003610400.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9597 chr22 ENSEMBL exon 21376965 21377040 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 4; exon_id "ENSE00003529221.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9598 chr22 ENSEMBL CDS 21376965 21377040 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 4; exon_id "ENSE00003529221.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9599 chr22 ENSEMBL exon 21377231 21377324 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 5; exon_id "ENSE00003511006.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9600 chr22 ENSEMBL CDS 21377231 21377324 . + 2 gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 5; exon_id "ENSE00003511006.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9601 chr22 ENSEMBL exon 21377407 21377487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 6; exon_id "ENSE00003606892.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9602 chr22 ENSEMBL CDS 21377407 21377487 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 6; exon_id "ENSE00003606892.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9603 chr22 ENSEMBL exon 21377564 21377705 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 7; exon_id "ENSE00003685177.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9604 chr22 ENSEMBL CDS 21377564 21377705 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 7; exon_id "ENSE00003685177.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9605 chr22 ENSEMBL exon 21377798 21377907 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 8; exon_id "ENSE00003680336.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9606 chr22 ENSEMBL CDS 21377798 21377907 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 8; exon_id "ENSE00003680336.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9607 chr22 ENSEMBL exon 21380094 21380187 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 9; exon_id "ENSE00003679555.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9608 chr22 ENSEMBL CDS 21380094 21380187 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 9; exon_id "ENSE00003679555.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9609 chr22 ENSEMBL exon 21380300 21380365 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 10; exon_id "ENSE00003641122.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9610 chr22 ENSEMBL CDS 21380300 21380365 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 10; exon_id "ENSE00003641122.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9611 chr22 ENSEMBL exon 21380541 21380618 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 11; exon_id "ENSE00003667669.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9612 chr22 ENSEMBL CDS 21380541 21380618 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 11; exon_id "ENSE00003667669.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9613 chr22 ENSEMBL exon 21380709 21383119 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 12; exon_id "ENSE00001347509.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9614 chr22 ENSEMBL CDS 21380709 21380903 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 12; exon_id "ENSE00001347509.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9615 chr22 ENSEMBL stop_codon 21380904 21380906 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; exon_number 12; exon_id "ENSE00001347509.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9616 chr22 ENSEMBL UTR 21369449 21369493 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9617 chr22 ENSEMBL UTR 21380904 21383119 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000336296.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9618 chr22 HAVANA transcript 21369459 21381487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9619 chr22 HAVANA exon 21369459 21369549 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 1; exon_id "ENSE00001550508.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9620 chr22 HAVANA CDS 21369464 21369549 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 1; exon_id "ENSE00001550508.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9621 chr22 HAVANA start_codon 21369464 21369466 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 1; exon_id "ENSE00001550508.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9622 chr22 HAVANA exon 21370231 21370381 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 2; exon_id "ENSE00003567732.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9623 chr22 HAVANA CDS 21370231 21370381 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 2; exon_id "ENSE00003567732.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9624 chr22 HAVANA exon 21372278 21372349 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 3; exon_id "ENSE00003610400.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9625 chr22 HAVANA CDS 21372278 21372349 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 3; exon_id "ENSE00003610400.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9626 chr22 HAVANA exon 21376965 21377040 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 4; exon_id "ENSE00003529221.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9627 chr22 HAVANA CDS 21376965 21377040 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 4; exon_id "ENSE00003529221.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9628 chr22 HAVANA exon 21377231 21377324 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 5; exon_id "ENSE00003511006.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9629 chr22 HAVANA CDS 21377231 21377324 . + 2 gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 5; exon_id "ENSE00003511006.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9630 chr22 HAVANA exon 21377407 21377487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 6; exon_id "ENSE00003606892.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9631 chr22 HAVANA CDS 21377407 21377487 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 6; exon_id "ENSE00003606892.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9632 chr22 HAVANA exon 21377564 21377705 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 7; exon_id "ENSE00003685177.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9633 chr22 HAVANA CDS 21377564 21377705 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 7; exon_id "ENSE00003685177.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9634 chr22 HAVANA exon 21377798 21377907 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 8; exon_id "ENSE00003680336.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9635 chr22 HAVANA CDS 21377798 21377907 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 8; exon_id "ENSE00003680336.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9636 chr22 HAVANA exon 21380094 21380187 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 9; exon_id "ENSE00003679555.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9637 chr22 HAVANA CDS 21380094 21380187 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 9; exon_id "ENSE00003679555.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9638 chr22 HAVANA exon 21380300 21380365 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 10; exon_id "ENSE00003641122.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9639 chr22 HAVANA CDS 21380300 21380365 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 10; exon_id "ENSE00003641122.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9640 chr22 HAVANA exon 21380541 21380618 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 11; exon_id "ENSE00003667669.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9641 chr22 HAVANA CDS 21380541 21380618 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 11; exon_id "ENSE00003667669.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9642 chr22 HAVANA exon 21380709 21381487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 12; exon_id "ENSE00001548197.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9643 chr22 HAVANA CDS 21380709 21380903 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 12; exon_id "ENSE00001548197.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9644 chr22 HAVANA stop_codon 21380904 21380906 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; exon_number 12; exon_id "ENSE00001548197.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9645 chr22 HAVANA UTR 21369459 21369463 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9646 chr22 HAVANA UTR 21380904 21381487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000401443.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS54504.1"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320427.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9647 chr22 HAVANA transcript 21369464 21373080 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000469722.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "P2RX6-006"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320430.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9648 chr22 HAVANA exon 21369464 21369627 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000469722.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "P2RX6-006"; exon_number 1; exon_id "ENSE00001562819.2"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320430.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9649 chr22 HAVANA exon 21370231 21370381 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000469722.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "P2RX6-006"; exon_number 2; exon_id "ENSE00003607003.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320430.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9650 chr22 HAVANA exon 21372210 21373080 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000469722.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "P2RX6-006"; exon_number 3; exon_id "ENSE00001834397.2"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320430.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9651 chr22 HAVANA transcript 21369472 21377441 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000452228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9652 chr22 HAVANA exon 21369472 21369627 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000452228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-007"; exon_number 1; exon_id "ENSE00001694083.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9653 chr22 HAVANA CDS 21369472 21369627 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000452228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-007"; exon_number 1; exon_id "ENSE00001694083.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9654 chr22 HAVANA exon 21370231 21370381 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000452228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-007"; exon_number 2; exon_id "ENSE00003567732.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9655 chr22 HAVANA CDS 21370231 21370381 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000452228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-007"; exon_number 2; exon_id "ENSE00003567732.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9656 chr22 HAVANA exon 21372210 21372349 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000452228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-007"; exon_number 3; exon_id "ENSE00001684700.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9657 chr22 HAVANA CDS 21372210 21372260 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000452228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-007"; exon_number 3; exon_id "ENSE00001684700.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9658 chr22 HAVANA stop_codon 21372261 21372263 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000452228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-007"; exon_number 3; exon_id "ENSE00001684700.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9659 chr22 HAVANA exon 21377231 21377324 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000452228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-007"; exon_number 4; exon_id "ENSE00003499802.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9660 chr22 HAVANA exon 21377407 21377441 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000452228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-007"; exon_number 5; exon_id "ENSE00001722427.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9661 chr22 HAVANA UTR 21372261 21372349 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000452228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9662 chr22 HAVANA UTR 21377231 21377324 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000452228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9663 chr22 HAVANA UTR 21377407 21377441 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000452228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320431.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9664 chr22 HAVANA transcript 21369476 21382297 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9665 chr22 HAVANA exon 21369476 21369622 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 1; exon_id "ENSE00003579883.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9666 chr22 HAVANA CDS 21369476 21369622 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 1; exon_id "ENSE00003579883.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9667 chr22 HAVANA exon 21370231 21370381 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 2; exon_id "ENSE00003638815.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9668 chr22 HAVANA CDS 21370231 21370381 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 2; exon_id "ENSE00003638815.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9669 chr22 HAVANA exon 21372278 21372349 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 3; exon_id "ENSE00003687581.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9670 chr22 HAVANA CDS 21372278 21372349 . + 2 gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 3; exon_id "ENSE00003687581.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9671 chr22 HAVANA exon 21376965 21377040 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 4; exon_id "ENSE00003512604.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9672 chr22 HAVANA CDS 21376965 21376984 . + 2 gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 4; exon_id "ENSE00003512604.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9673 chr22 HAVANA stop_codon 21376985 21376987 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 4; exon_id "ENSE00003512604.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9674 chr22 HAVANA exon 21377231 21377324 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 5; exon_id "ENSE00003499802.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9675 chr22 HAVANA exon 21377407 21377487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 6; exon_id "ENSE00003637449.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9676 chr22 HAVANA exon 21377564 21377705 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 7; exon_id "ENSE00003475051.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9677 chr22 HAVANA exon 21377798 21377907 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 8; exon_id "ENSE00003661005.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9678 chr22 HAVANA exon 21380094 21380187 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 9; exon_id "ENSE00003471010.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9679 chr22 HAVANA exon 21380300 21380365 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 10; exon_id "ENSE00003656108.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9680 chr22 HAVANA exon 21380541 21380618 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 11; exon_id "ENSE00003618304.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9681 chr22 HAVANA exon 21380709 21381246 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 12; exon_id "ENSE00003482249.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9682 chr22 HAVANA exon 21381797 21382297 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; exon_number 13; exon_id "ENSE00001748974.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9683 chr22 HAVANA UTR 21376985 21377040 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9684 chr22 HAVANA UTR 21377231 21377324 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9685 chr22 HAVANA UTR 21377407 21377487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9686 chr22 HAVANA UTR 21377564 21377705 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9687 chr22 HAVANA UTR 21377798 21377907 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9688 chr22 HAVANA UTR 21380094 21380187 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9689 chr22 HAVANA UTR 21380300 21380365 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9690 chr22 HAVANA UTR 21380541 21380618 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9691 chr22 HAVANA UTR 21380709 21381246 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9692 chr22 HAVANA UTR 21381797 21382297 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000432930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320428.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9693 chr22 ENSEMBL transcript 21369476 21382296 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9694 chr22 ENSEMBL exon 21369476 21369622 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 1; exon_id "ENSE00003467499.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9695 chr22 ENSEMBL CDS 21369618 21369622 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 1; exon_id "ENSE00003467499.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9696 chr22 ENSEMBL start_codon 21369618 21369620 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 1; exon_id "ENSE00003467499.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9697 chr22 ENSEMBL exon 21370231 21370381 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 2; exon_id "ENSE00003567732.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9698 chr22 ENSEMBL CDS 21370231 21370381 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 2; exon_id "ENSE00003567732.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9699 chr22 ENSEMBL exon 21372278 21372349 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 3; exon_id "ENSE00003610400.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9700 chr22 ENSEMBL CDS 21372278 21372349 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 3; exon_id "ENSE00003610400.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9701 chr22 ENSEMBL exon 21376965 21377040 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 4; exon_id "ENSE00003529221.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9702 chr22 ENSEMBL CDS 21376965 21377040 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 4; exon_id "ENSE00003529221.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9703 chr22 ENSEMBL exon 21377231 21377324 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 5; exon_id "ENSE00003511006.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9704 chr22 ENSEMBL CDS 21377231 21377324 . + 2 gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 5; exon_id "ENSE00003511006.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9705 chr22 ENSEMBL exon 21377407 21377487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 6; exon_id "ENSE00003606892.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9706 chr22 ENSEMBL CDS 21377407 21377487 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 6; exon_id "ENSE00003606892.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9707 chr22 ENSEMBL exon 21377564 21377705 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 7; exon_id "ENSE00003685177.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9708 chr22 ENSEMBL CDS 21377564 21377705 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 7; exon_id "ENSE00003685177.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9709 chr22 ENSEMBL exon 21377798 21377907 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 8; exon_id "ENSE00003680336.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9710 chr22 ENSEMBL CDS 21377798 21377907 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 8; exon_id "ENSE00003680336.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9711 chr22 ENSEMBL exon 21380094 21380187 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 9; exon_id "ENSE00003679555.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9712 chr22 ENSEMBL CDS 21380094 21380187 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 9; exon_id "ENSE00003679555.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9713 chr22 ENSEMBL exon 21380300 21380365 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 10; exon_id "ENSE00003641122.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9714 chr22 ENSEMBL CDS 21380300 21380365 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 10; exon_id "ENSE00003641122.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9715 chr22 ENSEMBL exon 21380541 21380618 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 11; exon_id "ENSE00003667669.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9716 chr22 ENSEMBL CDS 21380541 21380618 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 11; exon_id "ENSE00003667669.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9717 chr22 ENSEMBL exon 21380709 21381246 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 12; exon_id "ENSE00003499709.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9718 chr22 ENSEMBL CDS 21380709 21380903 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 12; exon_id "ENSE00003499709.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9719 chr22 ENSEMBL stop_codon 21380904 21380906 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 12; exon_id "ENSE00003499709.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9720 chr22 ENSEMBL exon 21381797 21382296 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; exon_number 13; exon_id "ENSE00002219867.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9721 chr22 ENSEMBL UTR 21369476 21369617 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9722 chr22 ENSEMBL UTR 21380904 21381246 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9723 chr22 ENSEMBL UTR 21381797 21382296 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000443995.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "P2RX6-203"; level 3; tag "basic"; havana_gene "OTTHUMG00000150689.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9724 chr22 HAVANA transcript 21369479 21382302 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9725 chr22 HAVANA exon 21369479 21369627 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 1; exon_id "ENSE00001592483.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9726 chr22 HAVANA CDS 21369479 21369627 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 1; exon_id "ENSE00001592483.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9727 chr22 HAVANA exon 21370231 21370381 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 2; exon_id "ENSE00003567732.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9728 chr22 HAVANA CDS 21370231 21370381 . + 1 gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 2; exon_id "ENSE00003567732.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9729 chr22 HAVANA exon 21377231 21377324 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 3; exon_id "ENSE00003655332.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9730 chr22 HAVANA CDS 21377231 21377233 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 3; exon_id "ENSE00003655332.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9731 chr22 HAVANA stop_codon 21377234 21377236 . + 0 gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 3; exon_id "ENSE00003655332.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9732 chr22 HAVANA exon 21377407 21377487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 4; exon_id "ENSE00003637449.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9733 chr22 HAVANA exon 21377564 21377705 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 5; exon_id "ENSE00003475051.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9734 chr22 HAVANA exon 21377798 21377907 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 6; exon_id "ENSE00003661005.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9735 chr22 HAVANA exon 21380094 21380187 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 7; exon_id "ENSE00003471010.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9736 chr22 HAVANA exon 21380300 21380365 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 8; exon_id "ENSE00003656108.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9737 chr22 HAVANA exon 21380541 21380618 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 9; exon_id "ENSE00003618304.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9738 chr22 HAVANA exon 21380709 21381246 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 10; exon_id "ENSE00003482249.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9739 chr22 HAVANA exon 21381797 21382302 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; exon_number 11; exon_id "ENSE00001609268.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9740 chr22 HAVANA UTR 21377234 21377324 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9741 chr22 HAVANA UTR 21377407 21377487 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9742 chr22 HAVANA UTR 21377564 21377705 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9743 chr22 HAVANA UTR 21377798 21377907 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9744 chr22 HAVANA UTR 21380094 21380187 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9745 chr22 HAVANA UTR 21380300 21380365 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9746 chr22 HAVANA UTR 21380541 21380618 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9747 chr22 HAVANA UTR 21380709 21381246 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9748 chr22 HAVANA UTR 21381797 21382302 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000422210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "P2RX6-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320429.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9749 chr22 HAVANA transcript 21377638 21380886 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000487342.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "P2RX6-008"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320432.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9750 chr22 HAVANA exon 21377638 21377705 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000487342.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "P2RX6-008"; exon_number 1; exon_id "ENSE00001824543.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320432.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9751 chr22 HAVANA exon 21377798 21377907 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000487342.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "P2RX6-008"; exon_number 2; exon_id "ENSE00003661005.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320432.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9752 chr22 HAVANA exon 21380094 21380187 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000487342.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "P2RX6-008"; exon_number 3; exon_id "ENSE00003471010.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320432.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9753 chr22 HAVANA exon 21380300 21380618 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000487342.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "P2RX6-008"; exon_number 4; exon_id "ENSE00001809890.1"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320432.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9754 chr22 HAVANA exon 21380709 21380886 . + . gene_id "ENSG00000099957.12"; transcript_id "ENST00000487342.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "P2RX6"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "P2RX6-008"; exon_number 5; exon_id "ENSE00001764431.2"; level 2; havana_gene "OTTHUMG00000150689.3"; havana_transcript "OTTHUMT00000320432.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9755 chr22 HAVANA gene 21383007 21387129 . - . gene_id "ENSG00000099960.8"; transcript_id "ENSG00000099960.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4"; level 2; havana_gene "OTTHUMG00000150896.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9756 chr22 HAVANA transcript 21383007 21386838 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9757 chr22 HAVANA exon 21386820 21386838 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; exon_number 1; exon_id "ENSE00001751281.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9758 chr22 HAVANA exon 21385120 21386144 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; exon_number 2; exon_id "ENSE00001550173.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9759 chr22 HAVANA CDS 21385120 21386101 . - 0 gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; exon_number 2; exon_id "ENSE00001550173.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9760 chr22 HAVANA start_codon 21386099 21386101 . - 0 gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; exon_number 2; exon_id "ENSE00001550173.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9761 chr22 HAVANA exon 21384000 21384640 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; exon_number 3; exon_id "ENSE00000651016.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9762 chr22 HAVANA CDS 21384000 21384640 . - 2 gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; exon_number 3; exon_id "ENSE00000651016.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9763 chr22 HAVANA exon 21383625 21383733 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; exon_number 4; exon_id "ENSE00000651015.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9764 chr22 HAVANA CDS 21383625 21383733 . - 0 gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; exon_number 4; exon_id "ENSE00000651015.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9765 chr22 HAVANA exon 21383007 21383519 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; exon_number 5; exon_id "ENSE00001551492.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9766 chr22 HAVANA CDS 21383347 21383519 . - 2 gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; exon_number 5; exon_id "ENSE00001551492.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9767 chr22 HAVANA stop_codon 21383344 21383346 . - 0 gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; exon_number 5; exon_id "ENSE00001551492.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9768 chr22 HAVANA UTR 21386820 21386838 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9769 chr22 HAVANA UTR 21386102 21386144 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9770 chr22 HAVANA UTR 21383007 21383346 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000403586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320468.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9771 chr22 HAVANA transcript 21383007 21386847 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9772 chr22 HAVANA exon 21386820 21386847 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; exon_number 1; exon_id "ENSE00001493915.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9773 chr22 HAVANA exon 21385120 21386141 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; exon_number 2; exon_id "ENSE00001493914.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9774 chr22 HAVANA CDS 21385120 21386101 . - 0 gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; exon_number 2; exon_id "ENSE00001493914.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9775 chr22 HAVANA start_codon 21386099 21386101 . - 0 gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; exon_number 2; exon_id "ENSE00001493914.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9776 chr22 HAVANA exon 21384000 21384640 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; exon_number 3; exon_id "ENSE00000651016.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9777 chr22 HAVANA CDS 21384000 21384640 . - 2 gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; exon_number 3; exon_id "ENSE00000651016.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9778 chr22 HAVANA exon 21383625 21383733 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; exon_number 4; exon_id "ENSE00000651015.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9779 chr22 HAVANA CDS 21383625 21383733 . - 0 gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; exon_number 4; exon_id "ENSE00000651015.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9780 chr22 HAVANA exon 21383007 21383519 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; exon_number 5; exon_id "ENSE00001551492.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9781 chr22 HAVANA CDS 21383347 21383519 . - 2 gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; exon_number 5; exon_id "ENSE00001551492.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9782 chr22 HAVANA stop_codon 21383344 21383346 . - 0 gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; exon_number 5; exon_id "ENSE00001551492.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9783 chr22 HAVANA UTR 21386820 21386847 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9784 chr22 HAVANA UTR 21386102 21386141 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9785 chr22 HAVANA UTR 21383007 21383346 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000382932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33608.1"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320467.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9786 chr22 HAVANA transcript 21385857 21387129 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000426145.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320469.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9787 chr22 HAVANA exon 21386999 21387129 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000426145.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-003"; exon_number 1; exon_id "ENSE00001762341.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320469.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9788 chr22 HAVANA exon 21385857 21386141 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000426145.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-003"; exon_number 2; exon_id "ENSE00001596859.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320469.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9789 chr22 HAVANA CDS 21385857 21386101 . - 0 gene_id "ENSG00000099960.8"; transcript_id "ENST00000426145.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-003"; exon_number 2; exon_id "ENSE00001596859.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320469.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9790 chr22 HAVANA start_codon 21386099 21386101 . - 0 gene_id "ENSG00000099960.8"; transcript_id "ENST00000426145.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-003"; exon_number 2; exon_id "ENSE00001596859.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320469.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9791 chr22 HAVANA UTR 21386999 21387129 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000426145.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320469.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9792 chr22 HAVANA UTR 21386102 21386141 . - . gene_id "ENSG00000099960.8"; transcript_id "ENST00000426145.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC7A4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC7A4-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150896.1"; havana_transcript "OTTHUMT00000320469.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9793 chr22 HAVANA gene 21385646 21398258 . + . gene_id "ENSG00000226872.1"; transcript_id "ENSG00000226872.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC002472.11"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AC002472.11"; level 2; havana_gene "OTTHUMG00000150899.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9794 chr22 HAVANA transcript 21385646 21398258 . + . gene_id "ENSG00000226872.1"; transcript_id "ENST00000450652.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC002472.11"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC002472.11-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150899.1"; havana_transcript "OTTHUMT00000320476.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9795 chr22 HAVANA exon 21385646 21385792 . + . gene_id "ENSG00000226872.1"; transcript_id "ENST00000450652.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC002472.11"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC002472.11-001"; exon_number 1; exon_id "ENSE00001703338.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150899.1"; havana_transcript "OTTHUMT00000320476.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9796 chr22 HAVANA exon 21396992 21397344 . + . gene_id "ENSG00000226872.1"; transcript_id "ENST00000450652.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC002472.11"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC002472.11-001"; exon_number 2; exon_id "ENSE00001731676.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150899.1"; havana_transcript "OTTHUMT00000320476.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9797 chr22 HAVANA exon 21398196 21398258 . + . gene_id "ENSG00000226872.1"; transcript_id "ENST00000450652.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AC002472.11"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AC002472.11-001"; exon_number 3; exon_id "ENSE00001660360.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150899.1"; havana_transcript "OTTHUMT00000320476.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9798 chr22 ENSEMBL gene 21388465 21388561 . - . gene_id "ENSG00000207575.1"; transcript_id "ENSG00000207575.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR649"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR649"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9799 chr22 ENSEMBL transcript 21388465 21388561 . - . gene_id "ENSG00000207575.1"; transcript_id "ENST00000384843.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR649"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR649-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9800 chr22 ENSEMBL exon 21388465 21388561 . - . gene_id "ENSG00000207575.1"; transcript_id "ENST00000384843.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR649"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR649-201"; exon_number 1; exon_id "ENSE00001499850.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9801 chr22 HAVANA gene 21389532 21399306 . - . gene_id "ENSG00000206145.4"; transcript_id "ENSG00000206145.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "P2RX6P"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "P2RX6P"; level 2; havana_gene "OTTHUMG00000150898.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9802 chr22 HAVANA transcript 21389532 21399301 . - . gene_id "ENSG00000206145.4"; transcript_id "ENST00000439119.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "P2RX6P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "P2RX6P-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150898.1"; havana_transcript "OTTHUMT00000320475.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9803 chr22 HAVANA exon 21399251 21399301 . - . gene_id "ENSG00000206145.4"; transcript_id "ENST00000439119.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "P2RX6P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "P2RX6P-002"; exon_number 1; exon_id "ENSE00001677436.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150898.1"; havana_transcript "OTTHUMT00000320475.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9804 chr22 HAVANA exon 21398438 21398588 . - . gene_id "ENSG00000206145.4"; transcript_id "ENST00000439119.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "P2RX6P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "P2RX6P-002"; exon_number 2; exon_id "ENSE00001629439.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150898.1"; havana_transcript "OTTHUMT00000320475.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9805 chr22 HAVANA exon 21396632 21396703 . - . gene_id "ENSG00000206145.4"; transcript_id "ENST00000439119.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "P2RX6P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "P2RX6P-002"; exon_number 3; exon_id "ENSE00001671500.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150898.1"; havana_transcript "OTTHUMT00000320475.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9806 chr22 HAVANA exon 21389532 21389725 . - . gene_id "ENSG00000206145.4"; transcript_id "ENST00000439119.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "P2RX6P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "P2RX6P-002"; exon_number 4; exon_id "ENSE00001603327.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150898.1"; havana_transcript "OTTHUMT00000320475.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9807 chr22 HAVANA transcript 21396632 21399306 . - . gene_id "ENSG00000206145.4"; transcript_id "ENST00000450626.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "P2RX6P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "P2RX6P-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150898.1"; havana_transcript "OTTHUMT00000320474.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9808 chr22 HAVANA exon 21399173 21399306 . - . gene_id "ENSG00000206145.4"; transcript_id "ENST00000450626.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "P2RX6P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "P2RX6P-001"; exon_number 1; exon_id "ENSE00001704205.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150898.1"; havana_transcript "OTTHUMT00000320474.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9809 chr22 HAVANA exon 21398438 21398588 . - . gene_id "ENSG00000206145.4"; transcript_id "ENST00000450626.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "P2RX6P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "P2RX6P-001"; exon_number 2; exon_id "ENSE00001629439.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150898.1"; havana_transcript "OTTHUMT00000320474.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9810 chr22 HAVANA exon 21396632 21396703 . - . gene_id "ENSG00000206145.4"; transcript_id "ENST00000450626.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "P2RX6P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "P2RX6P-001"; exon_number 3; exon_id "ENSE00001671500.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150898.1"; havana_transcript "OTTHUMT00000320474.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9811 chr22 ENSEMBL transcript 21396680 21398538 . - . gene_id "ENSG00000206145.4"; transcript_id "ENST00000382931.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "P2RX6P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "P2RX6P-201"; level 3; havana_gene "OTTHUMG00000150898.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9812 chr22 ENSEMBL exon 21398438 21398538 . - . gene_id "ENSG00000206145.4"; transcript_id "ENST00000382931.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "P2RX6P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "P2RX6P-201"; exon_number 1; exon_id "ENSE00001493912.1"; level 3; havana_gene "OTTHUMG00000150898.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9813 chr22 ENSEMBL exon 21396680 21396703 . - . gene_id "ENSG00000206145.4"; transcript_id "ENST00000382931.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "P2RX6P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "P2RX6P-201"; exon_number 2; exon_id "ENSE00001493911.1"; level 3; havana_gene "OTTHUMG00000150898.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9814 chr22 HAVANA gene 21400249 21418457 . + . gene_id "ENSG00000187905.6"; transcript_id "ENSG00000187905.6"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AC002472.13"; level 2; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9815 chr22 HAVANA transcript 21400249 21418457 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000497328.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320470.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9816 chr22 HAVANA exon 21400249 21400414 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000497328.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-001"; exon_number 1; exon_id "ENSE00003618695.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320470.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9817 chr22 HAVANA exon 21401645 21401787 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000497328.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-001"; exon_number 2; exon_id "ENSE00003645500.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320470.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9818 chr22 HAVANA exon 21402173 21403446 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000497328.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-001"; exon_number 3; exon_id "ENSE00003473894.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320470.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9819 chr22 HAVANA exon 21406538 21406647 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000497328.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-001"; exon_number 4; exon_id "ENSE00003591684.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320470.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9820 chr22 HAVANA exon 21407649 21407764 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000497328.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-001"; exon_number 5; exon_id "ENSE00003570620.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320470.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9821 chr22 HAVANA exon 21409387 21409465 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000497328.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-001"; exon_number 6; exon_id "ENSE00003567574.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320470.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9822 chr22 HAVANA exon 21411225 21411489 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000497328.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-001"; exon_number 7; exon_id "ENSE00001941509.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320470.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9823 chr22 HAVANA exon 21414662 21414866 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000497328.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-001"; exon_number 8; exon_id "ENSE00003502860.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320470.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9824 chr22 HAVANA exon 21416013 21418457 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000497328.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-001"; exon_number 9; exon_id "ENSE00001947931.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320470.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9825 chr22 ENSEMBL transcript 21400249 21418453 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9826 chr22 ENSEMBL exon 21400249 21400414 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 1; exon_id "ENSE00003560245.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9827 chr22 ENSEMBL CDS 21400276 21400414 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 1; exon_id "ENSE00003560245.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9828 chr22 ENSEMBL start_codon 21400276 21400278 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 1; exon_id "ENSE00003560245.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9829 chr22 ENSEMBL exon 21401645 21401787 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 2; exon_id "ENSE00003537485.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9830 chr22 ENSEMBL CDS 21401645 21401787 . + 2 gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 2; exon_id "ENSE00003537485.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9831 chr22 ENSEMBL exon 21402173 21402305 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 3; exon_id "ENSE00001656293.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9832 chr22 ENSEMBL CDS 21402173 21402305 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 3; exon_id "ENSE00001656293.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9833 chr22 ENSEMBL exon 21403240 21403446 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 4; exon_id "ENSE00001777107.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9834 chr22 ENSEMBL CDS 21403240 21403446 . + 2 gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 4; exon_id "ENSE00001777107.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9835 chr22 ENSEMBL exon 21406538 21406647 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 5; exon_id "ENSE00003665361.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9836 chr22 ENSEMBL CDS 21406538 21406647 . + 2 gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 5; exon_id "ENSE00003665361.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9837 chr22 ENSEMBL exon 21407649 21407764 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 6; exon_id "ENSE00003550910.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9838 chr22 ENSEMBL CDS 21407649 21407764 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 6; exon_id "ENSE00003550910.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9839 chr22 ENSEMBL exon 21409387 21409462 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 7; exon_id "ENSE00001772397.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9840 chr22 ENSEMBL CDS 21409387 21409462 . + 1 gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 7; exon_id "ENSE00001772397.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9841 chr22 ENSEMBL exon 21411394 21411489 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 8; exon_id "ENSE00001675618.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9842 chr22 ENSEMBL CDS 21411394 21411489 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 8; exon_id "ENSE00001675618.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9843 chr22 ENSEMBL exon 21414662 21414866 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 9; exon_id "ENSE00003557369.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9844 chr22 ENSEMBL CDS 21414662 21414814 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 9; exon_id "ENSE00003557369.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9845 chr22 ENSEMBL stop_codon 21414815 21414817 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 9; exon_id "ENSE00003557369.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9846 chr22 ENSEMBL exon 21416013 21418453 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; exon_number 10; exon_id "ENSE00001542884.2"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9847 chr22 ENSEMBL UTR 21400249 21400275 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9848 chr22 ENSEMBL UTR 21414815 21414866 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9849 chr22 ENSEMBL UTR 21416013 21418453 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000342608.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9850 chr22 HAVANA transcript 21400270 21416565 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000473769.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-002"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320471.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9851 chr22 HAVANA exon 21400270 21400414 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000473769.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-002"; exon_number 1; exon_id "ENSE00003478762.1"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320471.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9852 chr22 HAVANA exon 21401645 21401787 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000473769.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-002"; exon_number 2; exon_id "ENSE00003645500.1"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320471.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9853 chr22 HAVANA exon 21402173 21403446 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000473769.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-002"; exon_number 3; exon_id "ENSE00003473894.1"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320471.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9854 chr22 HAVANA exon 21403603 21403745 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000473769.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-002"; exon_number 4; exon_id "ENSE00001809420.1"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320471.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9855 chr22 HAVANA exon 21406538 21406647 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000473769.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-002"; exon_number 5; exon_id "ENSE00003591684.1"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320471.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9856 chr22 HAVANA exon 21407649 21407764 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000473769.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-002"; exon_number 6; exon_id "ENSE00003570620.1"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320471.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9857 chr22 HAVANA exon 21408097 21408286 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000473769.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-002"; exon_number 7; exon_id "ENSE00001924446.1"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320471.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9858 chr22 HAVANA exon 21409387 21409465 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000473769.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-002"; exon_number 8; exon_id "ENSE00003567574.1"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320471.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9859 chr22 HAVANA exon 21411225 21411489 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000473769.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-002"; exon_number 9; exon_id "ENSE00001941509.1"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320471.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9860 chr22 HAVANA exon 21414662 21414866 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000473769.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-002"; exon_number 10; exon_id "ENSE00003502860.1"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320471.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9861 chr22 HAVANA exon 21416013 21416565 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000473769.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AC002472.13-002"; exon_number 11; exon_id "ENSE00001850719.1"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320471.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9862 chr22 ENSEMBL transcript 21400270 21416565 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9863 chr22 ENSEMBL exon 21400270 21400414 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 1; exon_id "ENSE00003585970.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9864 chr22 ENSEMBL CDS 21400276 21400414 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 1; exon_id "ENSE00003585970.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9865 chr22 ENSEMBL start_codon 21400276 21400278 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 1; exon_id "ENSE00003585970.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9866 chr22 ENSEMBL exon 21401645 21401787 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 2; exon_id "ENSE00003537485.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9867 chr22 ENSEMBL CDS 21401645 21401787 . + 2 gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 2; exon_id "ENSE00003537485.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9868 chr22 ENSEMBL exon 21402173 21403446 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 3; exon_id "ENSE00003664375.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9869 chr22 ENSEMBL CDS 21402173 21402373 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 3; exon_id "ENSE00003664375.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9870 chr22 ENSEMBL stop_codon 21402374 21402376 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 3; exon_id "ENSE00003664375.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9871 chr22 ENSEMBL exon 21403603 21403745 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 4; exon_id "ENSE00001809420.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9872 chr22 ENSEMBL exon 21406538 21406647 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 5; exon_id "ENSE00003591684.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9873 chr22 ENSEMBL exon 21407649 21407764 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 6; exon_id "ENSE00003570620.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9874 chr22 ENSEMBL exon 21408097 21408286 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 7; exon_id "ENSE00001924446.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9875 chr22 ENSEMBL exon 21409387 21409465 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 8; exon_id "ENSE00003567574.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9876 chr22 ENSEMBL exon 21411222 21411489 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 9; exon_id "ENSE00002278539.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9877 chr22 ENSEMBL exon 21414662 21414866 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 10; exon_id "ENSE00003502860.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9878 chr22 ENSEMBL exon 21416013 21416565 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; exon_number 11; exon_id "ENSE00001850719.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9879 chr22 ENSEMBL UTR 21400270 21400275 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9880 chr22 ENSEMBL UTR 21402374 21403446 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9881 chr22 ENSEMBL UTR 21403603 21403745 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9882 chr22 ENSEMBL UTR 21406538 21406647 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9883 chr22 ENSEMBL UTR 21407649 21407764 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9884 chr22 ENSEMBL UTR 21408097 21408286 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9885 chr22 ENSEMBL UTR 21409387 21409465 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9886 chr22 ENSEMBL UTR 21411222 21411489 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9887 chr22 ENSEMBL UTR 21414662 21414866 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9888 chr22 ENSEMBL UTR 21416013 21416565 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000543388.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AC002472.13-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000150897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9889 chr22 HAVANA transcript 21400276 21414736 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9890 chr22 HAVANA exon 21400276 21400414 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 1; exon_id "ENSE00001493908.3"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9891 chr22 HAVANA CDS 21400276 21400414 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 1; exon_id "ENSE00001493908.3"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9892 chr22 HAVANA start_codon 21400276 21400278 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 1; exon_id "ENSE00001493908.3"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9893 chr22 HAVANA exon 21401645 21401787 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 2; exon_id "ENSE00003537485.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9894 chr22 HAVANA CDS 21401645 21401787 . + 2 gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 2; exon_id "ENSE00003537485.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9895 chr22 HAVANA exon 21402173 21402305 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 3; exon_id "ENSE00001656293.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9896 chr22 HAVANA CDS 21402173 21402305 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 3; exon_id "ENSE00001656293.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9897 chr22 HAVANA exon 21403240 21403446 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 4; exon_id "ENSE00001777107.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9898 chr22 HAVANA CDS 21403240 21403446 . + 2 gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 4; exon_id "ENSE00001777107.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9899 chr22 HAVANA exon 21406538 21406647 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 5; exon_id "ENSE00003665361.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9900 chr22 HAVANA CDS 21406538 21406647 . + 2 gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 5; exon_id "ENSE00003665361.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9901 chr22 HAVANA exon 21407649 21407764 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 6; exon_id "ENSE00003550910.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9902 chr22 HAVANA CDS 21407649 21407764 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 6; exon_id "ENSE00003550910.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9903 chr22 HAVANA exon 21409387 21409465 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 7; exon_id "ENSE00003666167.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9904 chr22 HAVANA CDS 21409387 21409465 . + 1 gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 7; exon_id "ENSE00003666167.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9905 chr22 HAVANA exon 21411394 21411489 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 8; exon_id "ENSE00001675618.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9906 chr22 HAVANA CDS 21411394 21411489 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 8; exon_id "ENSE00001675618.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9907 chr22 HAVANA exon 21414662 21414736 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 9; exon_id "ENSE00001684710.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9908 chr22 HAVANA CDS 21414662 21414736 . + 0 gene_id "ENSG00000187905.6"; transcript_id "ENST00000442047.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AC002472.13-004"; exon_number 9; exon_id "ENSE00001684710.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320473.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9909 chr22 HAVANA transcript 21410819 21414686 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000469766.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AC002472.13-003"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320472.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9910 chr22 HAVANA exon 21410819 21411489 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000469766.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AC002472.13-003"; exon_number 1; exon_id "ENSE00001937164.1"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320472.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9911 chr22 HAVANA exon 21414662 21414686 . + . gene_id "ENSG00000187905.6"; transcript_id "ENST00000469766.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AC002472.13"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AC002472.13-003"; exon_number 2; exon_id "ENSE00001908655.1"; level 2; havana_gene "OTTHUMG00000150897.2"; havana_transcript "OTTHUMT00000320472.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9912 chr22 HAVANA gene 21419749 21424386 . + . gene_id "ENSG00000249680.1"; transcript_id "ENSG00000249680.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3GP"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "TUBA3GP"; level 2; havana_gene "OTTHUMG00000150926.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9913 chr22 HAVANA transcript 21419749 21424386 . + . gene_id "ENSG00000249680.1"; transcript_id "ENST00000410028.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3GP"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "TUBA3GP-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150926.1"; havana_transcript "OTTHUMT00000320577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9914 chr22 HAVANA exon 21419749 21419971 . + . gene_id "ENSG00000249680.1"; transcript_id "ENST00000410028.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3GP"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "TUBA3GP-001"; exon_number 1; exon_id "ENSE00002072062.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150926.1"; havana_transcript "OTTHUMT00000320577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9915 chr22 HAVANA exon 21421240 21421381 . + . gene_id "ENSG00000249680.1"; transcript_id "ENST00000410028.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3GP"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "TUBA3GP-001"; exon_number 2; exon_id "ENSE00002076785.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150926.1"; havana_transcript "OTTHUMT00000320577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9916 chr22 HAVANA exon 21421705 21422365 . + . gene_id "ENSG00000249680.1"; transcript_id "ENST00000410028.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3GP"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "TUBA3GP-001"; exon_number 3; exon_id "ENSE00001585529.2"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150926.1"; havana_transcript "OTTHUMT00000320577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9917 chr22 HAVANA exon 21424090 21424386 . + . gene_id "ENSG00000249680.1"; transcript_id "ENST00000410028.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBA3GP"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "TUBA3GP-001"; exon_number 4; exon_id "ENSE00001614140.2"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150926.1"; havana_transcript "OTTHUMT00000320577.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9918 chr22 HAVANA gene 21457305 21476574 . + . gene_id "ENSG00000169668.7"; transcript_id "ENSG00000169668.7"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP2"; level 2; havana_gene "OTTHUMG00000150627.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9919 chr22 HAVANA transcript 21457305 21476073 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000461808.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCRP2-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000319208.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9920 chr22 HAVANA exon 21457305 21457515 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000461808.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCRP2-003"; exon_number 1; exon_id "ENSE00002313154.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000319208.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9921 chr22 HAVANA exon 21470218 21470290 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000461808.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCRP2-003"; exon_number 2; exon_id "ENSE00002305775.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000319208.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9922 chr22 HAVANA exon 21471413 21471547 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000461808.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCRP2-003"; exon_number 3; exon_id "ENSE00002230431.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000319208.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9923 chr22 HAVANA exon 21472330 21472598 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000461808.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCRP2-003"; exon_number 4; exon_id "ENSE00002310928.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000319208.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9924 chr22 HAVANA exon 21473076 21473238 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000461808.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCRP2-003"; exon_number 5; exon_id "ENSE00001639737.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000319208.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9925 chr22 HAVANA exon 21475093 21476073 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000461808.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCRP2-003"; exon_number 6; exon_id "ENSE00001810160.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000319208.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9926 chr22 HAVANA transcript 21470218 21474047 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000447763.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP2-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000320578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9927 chr22 HAVANA exon 21470218 21470357 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000447763.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP2-001"; exon_number 1; exon_id "ENSE00001703874.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000320578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9928 chr22 HAVANA exon 21471413 21471547 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000447763.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP2-001"; exon_number 2; exon_id "ENSE00002230431.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000320578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9929 chr22 HAVANA exon 21472493 21472598 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000447763.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP2-001"; exon_number 3; exon_id "ENSE00001656457.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000320578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9930 chr22 HAVANA exon 21473076 21473238 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000447763.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP2-001"; exon_number 4; exon_id "ENSE00001639737.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000320578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9931 chr22 HAVANA exon 21473958 21474047 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000447763.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP2-001"; exon_number 5; exon_id "ENSE00001782365.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000320578.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9932 chr22 HAVANA transcript 21472879 21476574 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000398241.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BCRP2-002"; level 2; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000319242.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9933 chr22 HAVANA exon 21472879 21473238 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000398241.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BCRP2-002"; exon_number 1; exon_id "ENSE00001551048.2"; level 2; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000319242.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9934 chr22 HAVANA exon 21475093 21476574 . + . gene_id "ENSG00000169668.7"; transcript_id "ENST00000398241.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BCRP2-002"; exon_number 2; exon_id "ENSE00001642374.1"; level 2; havana_gene "OTTHUMG00000150627.4"; havana_transcript "OTTHUMT00000319242.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9935 chr22 HAVANA gene 21468896 21478740 . - . gene_id "ENSG00000197210.7"; transcript_id "ENSG00000197210.7"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1592A4.15"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "KB-1592A4.15"; level 2; havana_gene "OTTHUMG00000150927.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9936 chr22 HAVANA transcript 21468896 21478740 . - . gene_id "ENSG00000197210.7"; transcript_id "ENST00000420508.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1592A4.15"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1592A4.15-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150927.1"; havana_transcript "OTTHUMT00000320579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9937 chr22 HAVANA exon 21477016 21478740 . - . gene_id "ENSG00000197210.7"; transcript_id "ENST00000420508.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1592A4.15"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1592A4.15-001"; exon_number 1; exon_id "ENSE00001640075.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150927.1"; havana_transcript "OTTHUMT00000320579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9938 chr22 HAVANA exon 21476265 21476640 . - . gene_id "ENSG00000197210.7"; transcript_id "ENST00000420508.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1592A4.15"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1592A4.15-001"; exon_number 2; exon_id "ENSE00001651501.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150927.1"; havana_transcript "OTTHUMT00000320579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9939 chr22 HAVANA exon 21475103 21475209 . - . gene_id "ENSG00000197210.7"; transcript_id "ENST00000420508.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1592A4.15"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1592A4.15-001"; exon_number 3; exon_id "ENSE00001654062.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150927.1"; havana_transcript "OTTHUMT00000320579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9940 chr22 HAVANA exon 21472941 21473069 . - . gene_id "ENSG00000197210.7"; transcript_id "ENST00000420508.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1592A4.15"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1592A4.15-001"; exon_number 4; exon_id "ENSE00001671221.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150927.1"; havana_transcript "OTTHUMT00000320579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9941 chr22 HAVANA exon 21471369 21472283 . - . gene_id "ENSG00000197210.7"; transcript_id "ENST00000420508.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1592A4.15"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1592A4.15-001"; exon_number 5; exon_id "ENSE00001755632.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150927.1"; havana_transcript "OTTHUMT00000320579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9942 chr22 HAVANA exon 21468896 21470476 . - . gene_id "ENSG00000197210.7"; transcript_id "ENST00000420508.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1592A4.15"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1592A4.15-001"; exon_number 6; exon_id "ENSE00001788107.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150927.1"; havana_transcript "OTTHUMT00000320579.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9943 chr22 HAVANA gene 21477050 21482352 . - . gene_id "ENSG00000239511.1"; transcript_id "ENSG00000239511.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7"; level 2; havana_gene "OTTHUMG00000150783.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9944 chr22 ENSEMBL transcript 21477050 21482046 . - . gene_id "ENSG00000239511.1"; transcript_id "ENST00000419447.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9945 chr22 ENSEMBL exon 21480531 21482046 . - . gene_id "ENSG00000239511.1"; transcript_id "ENST00000419447.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-201"; exon_number 1; exon_id "ENSE00001802469.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9946 chr22 ENSEMBL CDS 21480540 21481925 . - 0 gene_id "ENSG00000239511.1"; transcript_id "ENST00000419447.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-201"; exon_number 1; exon_id "ENSE00001802469.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9947 chr22 ENSEMBL start_codon 21481923 21481925 . - 0 gene_id "ENSG00000239511.1"; transcript_id "ENST00000419447.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-201"; exon_number 1; exon_id "ENSE00001802469.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9948 chr22 ENSEMBL stop_codon 21480537 21480539 . - 0 gene_id "ENSG00000239511.1"; transcript_id "ENST00000419447.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-201"; exon_number 1; exon_id "ENSE00001802469.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9949 chr22 ENSEMBL exon 21477050 21477222 . - . gene_id "ENSG00000239511.1"; transcript_id "ENST00000419447.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-201"; exon_number 2; exon_id "ENSE00001787812.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9950 chr22 ENSEMBL UTR 21480531 21480539 . - . gene_id "ENSG00000239511.1"; transcript_id "ENST00000419447.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9951 chr22 ENSEMBL UTR 21481926 21482046 . - . gene_id "ENSG00000239511.1"; transcript_id "ENST00000419447.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9952 chr22 ENSEMBL UTR 21477050 21477222 . - . gene_id "ENSG00000239511.1"; transcript_id "ENST00000419447.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9953 chr22 HAVANA transcript 21479949 21482352 . - . gene_id "ENSG00000239511.1"; transcript_id "ENST00000329949.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1"; havana_transcript "OTTHUMT00000320070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9954 chr22 HAVANA exon 21479949 21482352 . - . gene_id "ENSG00000239511.1"; transcript_id "ENST00000329949.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-001"; exon_number 1; exon_id "ENSE00001316540.3"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1"; havana_transcript "OTTHUMT00000320070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9955 chr22 HAVANA CDS 21480540 21481925 . - 0 gene_id "ENSG00000239511.1"; transcript_id "ENST00000329949.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-001"; exon_number 1; exon_id "ENSE00001316540.3"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1"; havana_transcript "OTTHUMT00000320070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9956 chr22 HAVANA start_codon 21481923 21481925 . - 0 gene_id "ENSG00000239511.1"; transcript_id "ENST00000329949.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-001"; exon_number 1; exon_id "ENSE00001316540.3"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1"; havana_transcript "OTTHUMT00000320070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
9957 chr22 HAVANA stop_codon 21480537 21480539 . - 0 gene_id "ENSG00000239511.1"; transcript_id "ENST00000329949.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-001"; exon_number 1; exon_id "ENSE00001316540.3"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1"; havana_transcript "OTTHUMT00000320070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9958 chr22 HAVANA UTR 21479949 21480539 . - . gene_id "ENSG00000239511.1"; transcript_id "ENST00000329949.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1"; havana_transcript "OTTHUMT00000320070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9959 chr22 HAVANA UTR 21481926 21482352 . - . gene_id "ENSG00000239511.1"; transcript_id "ENST00000329949.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POM121L7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POM121L7-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150783.1"; havana_transcript "OTTHUMT00000320070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9960 chr22 HAVANA gene 21495913 21496660 . - . gene_id "ENSG00000224688.1"; transcript_id "ENSG00000224688.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1592A4.13"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1592A4.13"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150785.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9961 chr22 HAVANA transcript 21495913 21496660 . - . gene_id "ENSG00000224688.1"; transcript_id "ENST00000420708.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1592A4.13"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1592A4.13-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150785.2"; havana_transcript "OTTHUMT00000320072.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9962 chr22 HAVANA exon 21495913 21496660 . - . gene_id "ENSG00000224688.1"; transcript_id "ENST00000420708.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1592A4.13"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1592A4.13-001"; exon_number 1; exon_id "ENSE00001715453.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150785.2"; havana_transcript "OTTHUMT00000320072.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9963 chr22 HAVANA gene 21522047 21546445 . + . gene_id "ENSG00000215498.4"; transcript_id "ENSG00000215498.4"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "processed_transcript"; transcript_status "NOVEL"; transcript_name "FAM230B"; level 2; havana_gene "OTTHUMG00000150782.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9964 chr22 HAVANA transcript 21522047 21546445 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000451257.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320063.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9965 chr22 HAVANA exon 21522047 21522258 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000451257.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-002"; exon_number 1; exon_id "ENSE00001703012.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320063.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9966 chr22 HAVANA exon 21524235 21524293 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000451257.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-002"; exon_number 2; exon_id "ENSE00001720259.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320063.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9967 chr22 HAVANA exon 21524762 21524786 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000451257.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-002"; exon_number 3; exon_id "ENSE00001718401.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320063.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9968 chr22 HAVANA exon 21527733 21527819 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000451257.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-002"; exon_number 4; exon_id "ENSE00001660976.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320063.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9969 chr22 HAVANA exon 21532720 21532785 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000451257.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-002"; exon_number 5; exon_id "ENSE00001792082.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320063.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9970 chr22 HAVANA exon 21534785 21534846 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000451257.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-002"; exon_number 6; exon_id "ENSE00001672583.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320063.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9971 chr22 HAVANA exon 21535312 21535345 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000451257.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-002"; exon_number 7; exon_id "ENSE00001662983.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320063.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9972 chr22 HAVANA exon 21537560 21539876 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000451257.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-002"; exon_number 8; exon_id "ENSE00001706113.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320063.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9973 chr22 HAVANA exon 21540410 21540482 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000451257.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-002"; exon_number 9; exon_id "ENSE00001595365.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320063.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9974 chr22 HAVANA exon 21540709 21540749 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000451257.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-002"; exon_number 10; exon_id "ENSE00001726049.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320063.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9975 chr22 HAVANA exon 21541212 21541366 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000451257.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-002"; exon_number 11; exon_id "ENSE00001697956.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320063.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9976 chr22 HAVANA exon 21546011 21546445 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000451257.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-002"; exon_number 12; exon_id "ENSE00001661839.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320063.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9977 chr22 HAVANA transcript 21522118 21546438 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415376.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-001"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320062.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9978 chr22 HAVANA exon 21522118 21522258 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415376.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-001"; exon_number 1; exon_id "ENSE00001671021.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320062.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9979 chr22 HAVANA exon 21524235 21524293 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415376.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-001"; exon_number 2; exon_id "ENSE00001720259.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320062.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9980 chr22 HAVANA exon 21524762 21524786 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415376.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-001"; exon_number 3; exon_id "ENSE00001718401.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320062.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9981 chr22 HAVANA exon 21527733 21527819 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415376.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-001"; exon_number 4; exon_id "ENSE00001660976.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320062.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9982 chr22 HAVANA exon 21532720 21532785 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415376.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-001"; exon_number 5; exon_id "ENSE00001792082.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320062.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9983 chr22 HAVANA exon 21534785 21534846 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415376.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-001"; exon_number 6; exon_id "ENSE00001672583.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320062.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9984 chr22 HAVANA exon 21535312 21535345 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415376.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-001"; exon_number 7; exon_id "ENSE00001662983.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320062.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9985 chr22 HAVANA exon 21540410 21541366 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415376.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-001"; exon_number 8; exon_id "ENSE00001747411.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320062.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9986 chr22 HAVANA exon 21546011 21546438 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415376.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-001"; exon_number 9; exon_id "ENSE00001755097.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320062.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9987 chr22 HAVANA transcript 21522142 21525141 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000420583.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM230B-006"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320067.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9988 chr22 HAVANA exon 21522142 21522258 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000420583.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM230B-006"; exon_number 1; exon_id "ENSE00001768491.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320067.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9989 chr22 HAVANA exon 21524235 21524293 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000420583.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM230B-006"; exon_number 2; exon_id "ENSE00001720259.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320067.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9990 chr22 HAVANA exon 21524762 21525141 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000420583.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM230B-006"; exon_number 3; exon_id "ENSE00001730744.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320067.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9991 chr22 HAVANA transcript 21522142 21527819 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415704.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-007"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320068.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9992 chr22 HAVANA exon 21522142 21522258 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415704.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-007"; exon_number 1; exon_id "ENSE00001768491.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320068.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9993 chr22 HAVANA exon 21524235 21524293 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415704.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-007"; exon_number 2; exon_id "ENSE00001720259.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320068.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9994 chr22 HAVANA exon 21524762 21524894 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415704.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-007"; exon_number 3; exon_id "ENSE00001785360.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320068.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9995 chr22 HAVANA exon 21527733 21527819 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000415704.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-007"; exon_number 4; exon_id "ENSE00001660976.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320068.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9996 chr22 HAVANA transcript 21522174 21537611 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000421576.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-008"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9997 chr22 HAVANA exon 21522174 21522258 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000421576.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-008"; exon_number 1; exon_id "ENSE00001736802.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9998 chr22 HAVANA exon 21524235 21524293 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000421576.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-008"; exon_number 2; exon_id "ENSE00001720259.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
9999 chr22 HAVANA exon 21524762 21524786 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000421576.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-008"; exon_number 3; exon_id "ENSE00001718401.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10000 chr22 HAVANA exon 21525370 21525497 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000421576.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-008"; exon_number 4; exon_id "ENSE00001692287.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10001 chr22 HAVANA exon 21527733 21527819 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000421576.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-008"; exon_number 5; exon_id "ENSE00001660976.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10002 chr22 HAVANA exon 21532720 21532785 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000421576.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-008"; exon_number 6; exon_id "ENSE00001792082.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10003 chr22 HAVANA exon 21534785 21534846 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000421576.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-008"; exon_number 7; exon_id "ENSE00001672583.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10004 chr22 HAVANA exon 21535312 21535345 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000421576.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-008"; exon_number 8; exon_id "ENSE00001662983.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10005 chr22 HAVANA exon 21537560 21537611 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000421576.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-008"; exon_number 9; exon_id "ENSE00001619896.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10006 chr22 HAVANA transcript 21524102 21535345 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000446717.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM230B-005"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320066.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10007 chr22 HAVANA exon 21524102 21524293 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000446717.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM230B-005"; exon_number 1; exon_id "ENSE00001781334.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320066.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10008 chr22 HAVANA exon 21524762 21524786 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000446717.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM230B-005"; exon_number 2; exon_id "ENSE00001718401.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320066.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10009 chr22 HAVANA exon 21527733 21527819 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000446717.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM230B-005"; exon_number 3; exon_id "ENSE00001660976.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320066.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10010 chr22 HAVANA exon 21532720 21532785 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000446717.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM230B-005"; exon_number 4; exon_id "ENSE00001792082.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320066.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10011 chr22 HAVANA exon 21534785 21534846 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000446717.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM230B-005"; exon_number 5; exon_id "ENSE00001672583.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320066.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10012 chr22 HAVANA exon 21535312 21535345 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000446717.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM230B-005"; exon_number 6; exon_id "ENSE00001662983.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320066.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10013 chr22 HAVANA transcript 21524154 21524944 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000430463.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM230B-009"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320090.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10014 chr22 HAVANA exon 21524154 21524293 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000430463.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM230B-009"; exon_number 1; exon_id "ENSE00001784743.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320090.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10015 chr22 HAVANA exon 21524762 21524944 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000430463.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM230B-009"; exon_number 2; exon_id "ENSE00001787957.1"; level 2; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320090.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10016 chr22 HAVANA transcript 21524235 21537263 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000424410.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-004"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320065.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10017 chr22 HAVANA exon 21524235 21524293 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000424410.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-004"; exon_number 1; exon_id "ENSE00001720259.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320065.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10018 chr22 HAVANA exon 21524762 21524786 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000424410.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-004"; exon_number 2; exon_id "ENSE00001718401.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320065.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10019 chr22 HAVANA exon 21527733 21527819 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000424410.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-004"; exon_number 3; exon_id "ENSE00001660976.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320065.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10020 chr22 HAVANA exon 21532720 21532785 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000424410.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-004"; exon_number 4; exon_id "ENSE00001792082.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320065.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10021 chr22 HAVANA exon 21534785 21534846 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000424410.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-004"; exon_number 5; exon_id "ENSE00001672583.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320065.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10022 chr22 HAVANA exon 21535312 21535345 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000424410.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-004"; exon_number 6; exon_id "ENSE00001662983.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320065.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10023 chr22 HAVANA exon 21535741 21537263 . + . gene_id "ENSG00000215498.4"; transcript_id "ENST00000424410.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "FAM230B"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "FAM230B-004"; exon_number 7; exon_id "ENSE00001735762.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150782.3"; havana_transcript "OTTHUMT00000320065.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10024 chr22 HAVANA gene 21532181 21534164 . - . gene_id "ENSG00000234503.1"; transcript_id "ENSG00000234503.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1592A4.14"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "KB-1592A4.14"; level 2; havana_gene "OTTHUMG00000150794.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10025 chr22 HAVANA transcript 21532181 21534164 . - . gene_id "ENSG00000234503.1"; transcript_id "ENST00000417463.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1592A4.14"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1592A4.14-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150794.1"; havana_transcript "OTTHUMT00000320106.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10026 chr22 HAVANA exon 21534049 21534164 . - . gene_id "ENSG00000234503.1"; transcript_id "ENST00000417463.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1592A4.14"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1592A4.14-001"; exon_number 1; exon_id "ENSE00001643603.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150794.1"; havana_transcript "OTTHUMT00000320106.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10027 chr22 HAVANA exon 21532181 21532838 . - . gene_id "ENSG00000234503.1"; transcript_id "ENST00000417463.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1592A4.14"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1592A4.14-001"; exon_number 2; exon_id "ENSE00001749809.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150794.1"; havana_transcript "OTTHUMT00000320106.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10028 chr22 HAVANA gene 21562262 21581926 . - . gene_id "ENSG00000133475.12"; transcript_id "ENSG00000133475.12"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2"; level 1; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10029 chr22 HAVANA transcript 21562262 21579843 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10030 chr22 HAVANA exon 21579680 21579843 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 1; exon_id "ENSE00002357166.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10031 chr22 HAVANA CDS 21579680 21579843 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 1; exon_id "ENSE00002357166.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10032 chr22 HAVANA start_codon 21579841 21579843 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 1; exon_id "ENSE00002357166.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10033 chr22 HAVANA exon 21576373 21576503 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 2; exon_id "ENSE00001740087.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10034 chr22 HAVANA CDS 21576373 21576503 . - 1 gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 2; exon_id "ENSE00001740087.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10035 chr22 HAVANA exon 21576155 21576241 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 3; exon_id "ENSE00001774147.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10036 chr22 HAVANA CDS 21576155 21576241 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 3; exon_id "ENSE00001774147.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10037 chr22 HAVANA exon 21570760 21570956 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 4; exon_id "ENSE00001769816.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10038 chr22 HAVANA CDS 21570760 21570956 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 4; exon_id "ENSE00001769816.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10039 chr22 HAVANA exon 21570214 21570367 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 5; exon_id "ENSE00001743046.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10040 chr22 HAVANA CDS 21570214 21570367 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 5; exon_id "ENSE00001743046.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10041 chr22 HAVANA exon 21568014 21568163 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 6; exon_id "ENSE00001714500.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10042 chr22 HAVANA CDS 21568014 21568163 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 6; exon_id "ENSE00001714500.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10043 chr22 HAVANA exon 21567354 21567490 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 7; exon_id "ENSE00001601532.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10044 chr22 HAVANA CDS 21567354 21567490 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 7; exon_id "ENSE00001601532.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10045 chr22 HAVANA exon 21563648 21563835 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 8; exon_id "ENSE00001693745.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10046 chr22 HAVANA CDS 21563648 21563835 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 8; exon_id "ENSE00001693745.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10047 chr22 HAVANA exon 21563288 21563385 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 9; exon_id "ENSE00001136587.6"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10048 chr22 HAVANA CDS 21563288 21563385 . - 1 gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 9; exon_id "ENSE00001136587.6"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10049 chr22 HAVANA exon 21563073 21563185 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 10; exon_id "ENSE00001679774.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10050 chr22 HAVANA CDS 21563073 21563185 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 10; exon_id "ENSE00001679774.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10051 chr22 HAVANA exon 21562878 21562991 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 11; exon_id "ENSE00001667203.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10052 chr22 HAVANA CDS 21562878 21562991 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 11; exon_id "ENSE00001667203.1"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10053 chr22 HAVANA exon 21562262 21562573 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 12; exon_id "ENSE00001678831.2"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10054 chr22 HAVANA CDS 21562430 21562573 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 12; exon_id "ENSE00001678831.2"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10055 chr22 HAVANA stop_codon 21562427 21562429 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; exon_number 12; exon_id "ENSE00001678831.2"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10056 chr22 HAVANA UTR 21562262 21562429 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000405188.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-001"; level 2; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000319092.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10057 chr22 HAVANA transcript 21562263 21581926 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10058 chr22 HAVANA exon 21581685 21581926 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 1; exon_id "ENSE00001665023.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10059 chr22 HAVANA exon 21580883 21580951 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 2; exon_id "ENSE00001798126.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10060 chr22 HAVANA exon 21580394 21580567 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 3; exon_id "ENSE00001735434.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10061 chr22 HAVANA exon 21579680 21579850 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 4; exon_id "ENSE00002370764.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10062 chr22 HAVANA CDS 21579680 21579843 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 4; exon_id "ENSE00002370764.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10063 chr22 HAVANA start_codon 21579841 21579843 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 4; exon_id "ENSE00002370764.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10064 chr22 HAVANA exon 21576373 21576503 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 5; exon_id "ENSE00001740087.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10065 chr22 HAVANA CDS 21576373 21576503 . - 1 gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 5; exon_id "ENSE00001740087.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10066 chr22 HAVANA exon 21576155 21576241 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 6; exon_id "ENSE00001774147.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10067 chr22 HAVANA CDS 21576155 21576241 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 6; exon_id "ENSE00001774147.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10068 chr22 HAVANA exon 21570760 21570956 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 7; exon_id "ENSE00001769816.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10069 chr22 HAVANA CDS 21570760 21570956 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 7; exon_id "ENSE00001769816.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10070 chr22 HAVANA exon 21570214 21570367 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 8; exon_id "ENSE00001743046.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10071 chr22 HAVANA CDS 21570214 21570367 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 8; exon_id "ENSE00001743046.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10072 chr22 HAVANA exon 21568014 21568163 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 9; exon_id "ENSE00001714500.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10073 chr22 HAVANA CDS 21568014 21568163 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 9; exon_id "ENSE00001714500.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10074 chr22 HAVANA exon 21567354 21567490 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 10; exon_id "ENSE00001601532.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10075 chr22 HAVANA CDS 21567354 21567490 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 10; exon_id "ENSE00001601532.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10076 chr22 HAVANA exon 21563648 21563835 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 11; exon_id "ENSE00001693745.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10077 chr22 HAVANA CDS 21563648 21563835 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 11; exon_id "ENSE00001693745.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10078 chr22 HAVANA exon 21563288 21563415 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 12; exon_id "ENSE00001635224.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10079 chr22 HAVANA CDS 21563288 21563415 . - 1 gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 12; exon_id "ENSE00001635224.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10080 chr22 HAVANA exon 21563073 21563185 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 13; exon_id "ENSE00001679774.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10081 chr22 HAVANA CDS 21563073 21563185 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 13; exon_id "ENSE00001679774.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10082 chr22 HAVANA exon 21562878 21562991 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 14; exon_id "ENSE00001667203.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10083 chr22 HAVANA CDS 21562878 21562991 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 14; exon_id "ENSE00001667203.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10084 chr22 HAVANA exon 21562263 21562573 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 15; exon_id "ENSE00001562520.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10085 chr22 HAVANA CDS 21562430 21562573 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 15; exon_id "ENSE00001562520.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10086 chr22 HAVANA stop_codon 21562427 21562429 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; exon_number 15; exon_id "ENSE00001562520.1"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10087 chr22 HAVANA UTR 21581685 21581926 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10088 chr22 HAVANA UTR 21580883 21580951 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10089 chr22 HAVANA UTR 21580394 21580567 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10090 chr22 HAVANA UTR 21579844 21579850 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10091 chr22 HAVANA UTR 21562263 21562429 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000401924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-002"; level 1; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000150617.6"; havana_transcript "OTTHUMT00000320092.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10092 chr22 ENSEMBL transcript 21562294 21580582 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10093 chr22 ENSEMBL exon 21580394 21580582 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 1; exon_id "ENSE00001785256.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10094 chr22 ENSEMBL exon 21579680 21579850 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 2; exon_id "ENSE00002370764.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10095 chr22 ENSEMBL CDS 21579680 21579843 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 2; exon_id "ENSE00002370764.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10096 chr22 ENSEMBL start_codon 21579841 21579843 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 2; exon_id "ENSE00002370764.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10097 chr22 ENSEMBL exon 21576373 21576503 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 3; exon_id "ENSE00001740087.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10098 chr22 ENSEMBL CDS 21576373 21576503 . - 1 gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 3; exon_id "ENSE00001740087.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10099 chr22 ENSEMBL exon 21576155 21576241 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 4; exon_id "ENSE00001774147.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10100 chr22 ENSEMBL CDS 21576155 21576241 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 4; exon_id "ENSE00001774147.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10101 chr22 ENSEMBL exon 21570760 21570956 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 5; exon_id "ENSE00001769816.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10102 chr22 ENSEMBL CDS 21570760 21570956 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 5; exon_id "ENSE00001769816.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10103 chr22 ENSEMBL exon 21570214 21570367 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 6; exon_id "ENSE00001743046.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10104 chr22 ENSEMBL CDS 21570214 21570367 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 6; exon_id "ENSE00001743046.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10105 chr22 ENSEMBL exon 21568014 21568163 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 7; exon_id "ENSE00001714500.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10106 chr22 ENSEMBL CDS 21568014 21568163 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 7; exon_id "ENSE00001714500.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10107 chr22 ENSEMBL exon 21567354 21567490 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 8; exon_id "ENSE00001601532.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10108 chr22 ENSEMBL CDS 21567354 21567490 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 8; exon_id "ENSE00001601532.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10109 chr22 ENSEMBL exon 21563648 21563835 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 9; exon_id "ENSE00001693745.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10110 chr22 ENSEMBL CDS 21563648 21563835 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 9; exon_id "ENSE00001693745.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10111 chr22 ENSEMBL exon 21563288 21563415 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 10; exon_id "ENSE00001635224.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10112 chr22 ENSEMBL CDS 21563288 21563415 . - 1 gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 10; exon_id "ENSE00001635224.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10113 chr22 ENSEMBL exon 21563073 21563185 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 11; exon_id "ENSE00001679774.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10114 chr22 ENSEMBL CDS 21563073 21563185 . - 2 gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 11; exon_id "ENSE00001679774.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10115 chr22 ENSEMBL exon 21562878 21562991 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 12; exon_id "ENSE00001667203.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10116 chr22 ENSEMBL CDS 21562878 21562991 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 12; exon_id "ENSE00001667203.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10117 chr22 ENSEMBL exon 21562294 21562573 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 13; exon_id "ENSE00001598240.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10118 chr22 ENSEMBL CDS 21562430 21562573 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 13; exon_id "ENSE00001598240.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10119 chr22 ENSEMBL stop_codon 21562427 21562429 . - 0 gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; exon_number 13; exon_id "ENSE00001598240.1"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10120 chr22 ENSEMBL UTR 21580394 21580582 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10121 chr22 ENSEMBL UTR 21579844 21579850 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10122 chr22 ENSEMBL UTR 21562294 21562429 . - . gene_id "ENSG00000133475.12"; transcript_id "ENST00000424627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT2-201"; level 3; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150617.6";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10123 chr22 HAVANA gene 21622450 21623192 . + . gene_id "ENSG00000226885.1"; transcript_id "ENSG00000226885.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1183D5.9"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1183D5.9"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150760.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10124 chr22 HAVANA transcript 21622450 21623192 . + . gene_id "ENSG00000226885.1"; transcript_id "ENST00000441743.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1183D5.9"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1183D5.9-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150760.1"; havana_transcript "OTTHUMT00000319970.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10125 chr22 HAVANA exon 21622450 21623192 . + . gene_id "ENSG00000226885.1"; transcript_id "ENST00000441743.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1183D5.9"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1183D5.9-001"; exon_number 1; exon_id "ENSE00001665176.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150760.1"; havana_transcript "OTTHUMT00000319970.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10126 chr22 HAVANA gene 21637170 21638450 . + . gene_id "ENSG00000229266.1"; transcript_id "ENSG00000229266.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L8P"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L8P"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150759.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10127 chr22 HAVANA transcript 21637170 21638450 . + . gene_id "ENSG00000229266.1"; transcript_id "ENST00000417732.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L8P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L8P-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150759.1"; havana_transcript "OTTHUMT00000319969.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10128 chr22 HAVANA exon 21637170 21638450 . + . gene_id "ENSG00000229266.1"; transcript_id "ENST00000417732.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L8P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L8P-001"; exon_number 1; exon_id "ENSE00001760601.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150759.1"; havana_transcript "OTTHUMT00000319969.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10129 chr22 HAVANA gene 21645049 21648875 . - . gene_id "ENSG00000169662.8"; transcript_id "ENSG00000169662.8"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP6"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP6"; level 2; havana_gene "OTTHUMG00000150784.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10130 chr22 HAVANA transcript 21645049 21648875 . - . gene_id "ENSG00000169662.8"; transcript_id "ENST00000510112.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP6-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150784.2"; havana_transcript "OTTHUMT00000320071.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10131 chr22 HAVANA exon 21648736 21648875 . - . gene_id "ENSG00000169662.8"; transcript_id "ENST00000510112.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP6-001"; exon_number 1; exon_id "ENSE00002052224.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150784.2"; havana_transcript "OTTHUMT00000320071.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10132 chr22 HAVANA exon 21647546 21647681 . - . gene_id "ENSG00000169662.8"; transcript_id "ENST00000510112.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP6-001"; exon_number 2; exon_id "ENSE00002036360.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150784.2"; havana_transcript "OTTHUMT00000320071.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10133 chr22 HAVANA exon 21646495 21646600 . - . gene_id "ENSG00000169662.8"; transcript_id "ENST00000510112.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP6-001"; exon_number 3; exon_id "ENSE00002066462.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150784.2"; havana_transcript "OTTHUMT00000320071.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10134 chr22 HAVANA exon 21645855 21646017 . - . gene_id "ENSG00000169662.8"; transcript_id "ENST00000510112.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP6-001"; exon_number 4; exon_id "ENSE00002080838.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150784.2"; havana_transcript "OTTHUMT00000320071.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10135 chr22 HAVANA exon 21645049 21645135 . - . gene_id "ENSG00000169662.8"; transcript_id "ENST00000510112.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP6"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP6-001"; exon_number 5; exon_id "ENSE00002023633.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150784.2"; havana_transcript "OTTHUMT00000320071.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10136 chr22 HAVANA gene 21655279 21679331 . - . gene_id "ENSG00000206142.5"; transcript_id "ENSG00000206142.5"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "KB-1183D5.13"; level 2; havana_gene "OTTHUMG00000150795.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10137 chr22 HAVANA transcript 21655279 21679331 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000447720.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-001"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10138 chr22 HAVANA exon 21679120 21679331 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000447720.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-001"; exon_number 1; exon_id "ENSE00001740428.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10139 chr22 HAVANA exon 21677085 21677143 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000447720.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-001"; exon_number 2; exon_id "ENSE00001761776.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10140 chr22 HAVANA exon 21676592 21676616 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000447720.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-001"; exon_number 3; exon_id "ENSE00003455249.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10141 chr22 HAVANA exon 21673559 21673645 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000447720.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-001"; exon_number 4; exon_id "ENSE00003404569.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10142 chr22 HAVANA exon 21668589 21668654 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000447720.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-001"; exon_number 5; exon_id "ENSE00003315734.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10143 chr22 HAVANA exon 21666528 21666589 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000447720.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-001"; exon_number 6; exon_id "ENSE00003352113.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10144 chr22 HAVANA exon 21666029 21666062 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000447720.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-001"; exon_number 7; exon_id "ENSE00003349816.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10145 chr22 HAVANA exon 21661848 21663813 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000447720.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-001"; exon_number 8; exon_id "ENSE00001790025.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10146 chr22 HAVANA exon 21661242 21661314 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000447720.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-001"; exon_number 9; exon_id "ENSE00001760841.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10147 chr22 HAVANA exon 21660975 21661015 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000447720.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-001"; exon_number 10; exon_id "ENSE00001702744.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10148 chr22 HAVANA exon 21660358 21660512 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000447720.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-001"; exon_number 11; exon_id "ENSE00001615469.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10149 chr22 HAVANA exon 21655279 21655713 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000447720.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-001"; exon_number 12; exon_id "ENSE00001733711.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320107.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10150 chr22 HAVANA transcript 21655280 21664170 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000436681.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320109.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10151 chr22 HAVANA exon 21661848 21664170 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000436681.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-003"; exon_number 1; exon_id "ENSE00001619832.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320109.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10152 chr22 HAVANA exon 21660358 21661314 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000436681.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-003"; exon_number 2; exon_id "ENSE00003429744.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320109.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10153 chr22 HAVANA exon 21655280 21655713 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000436681.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-003"; exon_number 3; exon_id "ENSE00001641939.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320109.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10154 chr22 HAVANA transcript 21655286 21679331 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416615.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-002"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10155 chr22 HAVANA exon 21679120 21679331 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416615.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-002"; exon_number 1; exon_id "ENSE00001740428.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10156 chr22 HAVANA exon 21677085 21677143 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416615.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-002"; exon_number 2; exon_id "ENSE00001761776.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10157 chr22 HAVANA exon 21676592 21676616 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416615.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-002"; exon_number 3; exon_id "ENSE00003455249.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10158 chr22 HAVANA exon 21673559 21673645 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416615.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-002"; exon_number 4; exon_id "ENSE00003404569.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10159 chr22 HAVANA exon 21668589 21668654 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416615.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-002"; exon_number 5; exon_id "ENSE00003315734.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10160 chr22 HAVANA exon 21666528 21666589 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416615.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-002"; exon_number 6; exon_id "ENSE00003352113.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10161 chr22 HAVANA exon 21666029 21666062 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416615.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-002"; exon_number 7; exon_id "ENSE00003349816.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10162 chr22 HAVANA exon 21660358 21661314 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416615.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-002"; exon_number 8; exon_id "ENSE00003429744.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10163 chr22 HAVANA exon 21655286 21655713 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416615.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-002"; exon_number 9; exon_id "ENSE00001778924.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10164 chr22 ENSEMBL transcript 21663055 21663732 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000440315.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-201"; level 3; havana_gene "OTTHUMG00000150795.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10165 chr22 ENSEMBL exon 21663494 21663732 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000440315.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-201"; exon_number 1; exon_id "ENSE00001670781.2"; level 3; havana_gene "OTTHUMG00000150795.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10166 chr22 ENSEMBL exon 21663055 21663466 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000440315.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-201"; exon_number 2; exon_id "ENSE00001542966.3"; level 3; havana_gene "OTTHUMG00000150795.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10167 chr22 HAVANA transcript 21664110 21677143 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416405.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-009"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320115.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10168 chr22 HAVANA exon 21677085 21677143 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416405.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-009"; exon_number 1; exon_id "ENSE00001761776.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320115.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10169 chr22 HAVANA exon 21676592 21676616 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416405.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-009"; exon_number 2; exon_id "ENSE00003455249.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320115.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10170 chr22 HAVANA exon 21673559 21673645 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416405.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-009"; exon_number 3; exon_id "ENSE00003404569.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320115.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10171 chr22 HAVANA exon 21668589 21668654 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416405.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-009"; exon_number 4; exon_id "ENSE00003315734.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320115.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10172 chr22 HAVANA exon 21666528 21666589 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416405.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-009"; exon_number 5; exon_id "ENSE00003352113.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320115.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10173 chr22 HAVANA exon 21666029 21666062 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416405.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-009"; exon_number 6; exon_id "ENSE00003349816.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320115.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10174 chr22 HAVANA exon 21664110 21665633 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000416405.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-009"; exon_number 7; exon_id "ENSE00001604527.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320115.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10175 chr22 HAVANA transcript 21666029 21679226 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000453273.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-005"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320111.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10176 chr22 HAVANA exon 21679120 21679226 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000453273.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-005"; exon_number 1; exon_id "ENSE00001667557.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320111.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10177 chr22 HAVANA exon 21677085 21677273 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000453273.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-005"; exon_number 2; exon_id "ENSE00001750614.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320111.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10178 chr22 HAVANA exon 21676592 21676616 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000453273.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-005"; exon_number 3; exon_id "ENSE00003455249.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320111.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10179 chr22 HAVANA exon 21673559 21673645 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000453273.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-005"; exon_number 4; exon_id "ENSE00003404569.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320111.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10180 chr22 HAVANA exon 21668589 21668654 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000453273.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-005"; exon_number 5; exon_id "ENSE00003315734.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320111.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10181 chr22 HAVANA exon 21666528 21666589 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000453273.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-005"; exon_number 6; exon_id "ENSE00003352113.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320111.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10182 chr22 HAVANA exon 21666029 21666062 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000453273.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-005"; exon_number 7; exon_id "ENSE00003349816.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320111.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10183 chr22 HAVANA transcript 21666029 21679331 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000431488.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-004"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10184 chr22 HAVANA exon 21679120 21679331 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000431488.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-004"; exon_number 1; exon_id "ENSE00001740428.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10185 chr22 HAVANA exon 21677085 21677143 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000431488.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-004"; exon_number 2; exon_id "ENSE00001761776.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10186 chr22 HAVANA exon 21676592 21676616 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000431488.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-004"; exon_number 3; exon_id "ENSE00003455249.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10187 chr22 HAVANA exon 21675881 21676008 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000431488.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-004"; exon_number 4; exon_id "ENSE00001601946.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10188 chr22 HAVANA exon 21673559 21673645 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000431488.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-004"; exon_number 5; exon_id "ENSE00003404569.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10189 chr22 HAVANA exon 21668589 21668654 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000431488.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-004"; exon_number 6; exon_id "ENSE00003315734.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10190 chr22 HAVANA exon 21666528 21666589 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000431488.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-004"; exon_number 7; exon_id "ENSE00003352113.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10191 chr22 HAVANA exon 21666029 21666062 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000431488.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-004"; exon_number 8; exon_id "ENSE00003349816.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10192 chr22 HAVANA transcript 21673559 21679256 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000451574.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-006"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320112.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10193 chr22 HAVANA exon 21679120 21679256 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000451574.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-006"; exon_number 1; exon_id "ENSE00001722953.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320112.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10194 chr22 HAVANA exon 21677085 21677143 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000451574.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-006"; exon_number 2; exon_id "ENSE00001761776.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320112.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10195 chr22 HAVANA exon 21676484 21676616 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000451574.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-006"; exon_number 3; exon_id "ENSE00001798019.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320112.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10196 chr22 HAVANA exon 21673559 21673645 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000451574.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-006"; exon_number 4; exon_id "ENSE00003404569.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320112.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10197 chr22 HAVANA transcript 21676237 21679256 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000452952.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-007"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10198 chr22 HAVANA exon 21679120 21679256 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000452952.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-007"; exon_number 1; exon_id "ENSE00001722953.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10199 chr22 HAVANA exon 21677085 21677143 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000452952.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-007"; exon_number 2; exon_id "ENSE00001761776.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10200 chr22 HAVANA exon 21676237 21676616 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000452952.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-007"; exon_number 3; exon_id "ENSE00001789440.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10201 chr22 HAVANA transcript 21676430 21677224 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000411581.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-008"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320114.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10202 chr22 HAVANA exon 21677085 21677224 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000411581.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-008"; exon_number 1; exon_id "ENSE00001636106.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320114.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10203 chr22 HAVANA exon 21676430 21676616 . - . gene_id "ENSG00000206142.5"; transcript_id "ENST00000411581.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.13-008"; exon_number 2; exon_id "ENSE00001643881.1"; level 2; havana_gene "OTTHUMG00000150795.1"; havana_transcript "OTTHUMT00000320114.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10204 chr22 HAVANA gene 21667209 21669193 . + . gene_id "ENSG00000237407.1"; transcript_id "ENSG00000237407.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.14"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "KB-1183D5.14"; level 2; havana_gene "OTTHUMG00000150793.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10205 chr22 HAVANA transcript 21667209 21669193 . + . gene_id "ENSG00000237407.1"; transcript_id "ENST00000434730.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.14"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.14-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150793.1"; havana_transcript "OTTHUMT00000320091.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10206 chr22 HAVANA exon 21667209 21667325 . + . gene_id "ENSG00000237407.1"; transcript_id "ENST00000434730.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.14"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.14-001"; exon_number 1; exon_id "ENSE00001702620.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150793.1"; havana_transcript "OTTHUMT00000320091.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10207 chr22 HAVANA exon 21668536 21669193 . + . gene_id "ENSG00000237407.1"; transcript_id "ENST00000434730.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1183D5.14"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1183D5.14-001"; exon_number 2; exon_id "ENSE00001664888.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150793.1"; havana_transcript "OTTHUMT00000320091.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10208 chr22 HAVANA gene 21695884 21699547 . + . gene_id "ENSG00000232771.2"; transcript_id "ENSG00000232771.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PPP1R26P5"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "PPP1R26P5"; level 2; havana_gene "OTTHUMG00000150826.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10209 chr22 HAVANA transcript 21695884 21699547 . + . gene_id "ENSG00000232771.2"; transcript_id "ENST00000416640.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PPP1R26P5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "PPP1R26P5-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150826.3"; havana_transcript "OTTHUMT00000320223.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10210 chr22 HAVANA exon 21695884 21699547 . + . gene_id "ENSG00000232771.2"; transcript_id "ENST00000416640.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PPP1R26P5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "PPP1R26P5-001"; exon_number 1; exon_id "ENSE00001718059.2"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150826.3"; havana_transcript "OTTHUMT00000320223.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10211 chr22 HAVANA gene 21724353 21726234 . + . gene_id "ENSG00000226534.1"; transcript_id "ENSG00000226534.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1183D5.16"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1183D5.16"; level 2; havana_gene "OTTHUMG00000150824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10212 chr22 HAVANA transcript 21724353 21726234 . + . gene_id "ENSG00000226534.1"; transcript_id "ENST00000422450.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1183D5.16"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1183D5.16-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150824.1"; havana_transcript "OTTHUMT00000320221.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10213 chr22 HAVANA exon 21724353 21724563 . + . gene_id "ENSG00000226534.1"; transcript_id "ENST00000422450.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1183D5.16"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1183D5.16-001"; exon_number 1; exon_id "ENSE00001726557.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150824.1"; havana_transcript "OTTHUMT00000320221.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10214 chr22 HAVANA exon 21724805 21724949 . + . gene_id "ENSG00000226534.1"; transcript_id "ENST00000422450.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1183D5.16"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1183D5.16-001"; exon_number 2; exon_id "ENSE00001626852.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150824.1"; havana_transcript "OTTHUMT00000320221.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10215 chr22 HAVANA exon 21725438 21725601 . + . gene_id "ENSG00000226534.1"; transcript_id "ENST00000422450.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1183D5.16"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1183D5.16-001"; exon_number 3; exon_id "ENSE00001632358.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150824.1"; havana_transcript "OTTHUMT00000320221.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10216 chr22 HAVANA exon 21726066 21726234 . + . gene_id "ENSG00000226534.1"; transcript_id "ENST00000422450.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1183D5.16"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1183D5.16-001"; exon_number 4; exon_id "ENSE00001738550.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000150824.1"; havana_transcript "OTTHUMT00000320221.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10217 chr22 HAVANA gene 21737663 21743446 . + . gene_id "ENSG00000196934.3"; transcript_id "ENSG00000196934.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3B"; level 2; havana_gene "OTTHUMG00000150819.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10218 chr22 HAVANA transcript 21737663 21743446 . + . gene_id "ENSG00000196934.3"; transcript_id "ENST00000434111.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46668.1"; havana_gene "OTTHUMG00000150819.2"; havana_transcript "OTTHUMT00000320196.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10219 chr22 HAVANA exon 21737663 21743446 . + . gene_id "ENSG00000196934.3"; transcript_id "ENST00000434111.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3B-001"; exon_number 1; exon_id "ENSE00001708736.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46668.1"; havana_gene "OTTHUMG00000150819.2"; havana_transcript "OTTHUMT00000320196.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10220 chr22 HAVANA CDS 21738148 21743064 . + 0 gene_id "ENSG00000196934.3"; transcript_id "ENST00000434111.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3B-001"; exon_number 1; exon_id "ENSE00001708736.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46668.1"; havana_gene "OTTHUMG00000150819.2"; havana_transcript "OTTHUMT00000320196.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10221 chr22 HAVANA start_codon 21738148 21738150 . + 0 gene_id "ENSG00000196934.3"; transcript_id "ENST00000434111.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3B-001"; exon_number 1; exon_id "ENSE00001708736.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46668.1"; havana_gene "OTTHUMG00000150819.2"; havana_transcript "OTTHUMT00000320196.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10222 chr22 HAVANA stop_codon 21743065 21743067 . + 0 gene_id "ENSG00000196934.3"; transcript_id "ENST00000434111.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3B-001"; exon_number 1; exon_id "ENSE00001708736.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46668.1"; havana_gene "OTTHUMG00000150819.2"; havana_transcript "OTTHUMT00000320196.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10223 chr22 HAVANA UTR 21737663 21738147 . + . gene_id "ENSG00000196934.3"; transcript_id "ENST00000434111.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46668.1"; havana_gene "OTTHUMG00000150819.2"; havana_transcript "OTTHUMT00000320196.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10224 chr22 HAVANA UTR 21743065 21743446 . + . gene_id "ENSG00000196934.3"; transcript_id "ENST00000434111.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46668.1"; havana_gene "OTTHUMG00000150819.2"; havana_transcript "OTTHUMT00000320196.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10225 chr22 ENSEMBL gene 21743480 21743780 . + . gene_id "ENSG00000200057.1"; transcript_id "ENSG00000200057.1"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SKP63"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SKP63"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10226 chr22 ENSEMBL transcript 21743480 21743780 . + . gene_id "ENSG00000200057.1"; transcript_id "ENST00000363187.1"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SKP63"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SKP63-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10227 chr22 ENSEMBL exon 21743480 21743780 . + . gene_id "ENSG00000200057.1"; transcript_id "ENST00000363187.1"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SKP63"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SKP63-201"; exon_number 1; exon_id "ENSE00001807175.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10228 chr22 ENSEMBL gene 21743917 21743999 . - . gene_id "ENSG00000252314.1"; transcript_id "ENSG00000252314.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA18"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA18"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10229 chr22 ENSEMBL transcript 21743917 21743999 . - . gene_id "ENSG00000252314.1"; transcript_id "ENST00000516505.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA18"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA18.3-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10230 chr22 ENSEMBL exon 21743917 21743999 . - . gene_id "ENSG00000252314.1"; transcript_id "ENST00000516505.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA18"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA18.3-201"; exon_number 1; exon_id "ENSE00002088782.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10231 chr22 ENSEMBL gene 21744085 21744227 . - . gene_id "ENSG00000252020.1"; transcript_id "ENSG00000252020.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA17"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA17"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10232 chr22 ENSEMBL transcript 21744085 21744227 . - . gene_id "ENSG00000252020.1"; transcript_id "ENST00000516211.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA17"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA17.1-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10233 chr22 ENSEMBL exon 21744085 21744227 . - . gene_id "ENSG00000252020.1"; transcript_id "ENST00000516211.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA17"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA17.1-201"; exon_number 1; exon_id "ENSE00002088488.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10234 chr22 ENSEMBL gene 21765339 21765415 . + . gene_id "ENSG00000252402.1"; transcript_id "ENSG00000252402.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10235 chr22 ENSEMBL transcript 21765339 21765415 . + . gene_id "ENSG00000252402.1"; transcript_id "ENST00000516593.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.447-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10236 chr22 ENSEMBL exon 21765339 21765415 . + . gene_id "ENSG00000252402.1"; transcript_id "ENST00000516593.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.447-201"; exon_number 1; exon_id "ENSE00002088870.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10237 chr22 HAVANA gene 21771693 21805752 . + . gene_id "ENSG00000169635.5"; transcript_id "ENSG00000169635.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2"; level 2; havana_gene "OTTHUMG00000150781.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10238 chr22 HAVANA transcript 21771693 21805752 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000407464.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320117.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10239 chr22 HAVANA exon 21771693 21771849 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000407464.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-003"; exon_number 1; exon_id "ENSE00001372561.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320117.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10240 chr22 HAVANA exon 21797048 21797146 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000407464.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-003"; exon_number 2; exon_id "ENSE00001385660.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320117.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10241 chr22 HAVANA CDS 21797121 21797146 . + 0 gene_id "ENSG00000169635.5"; transcript_id "ENST00000407464.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-003"; exon_number 2; exon_id "ENSE00001385660.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320117.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10242 chr22 HAVANA start_codon 21797121 21797123 . + 0 gene_id "ENSG00000169635.5"; transcript_id "ENST00000407464.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-003"; exon_number 2; exon_id "ENSE00001385660.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320117.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10243 chr22 HAVANA exon 21799211 21805752 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000407464.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-003"; exon_number 3; exon_id "ENSE00001548117.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320117.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10244 chr22 HAVANA CDS 21799211 21801029 . + 1 gene_id "ENSG00000169635.5"; transcript_id "ENST00000407464.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-003"; exon_number 3; exon_id "ENSE00001548117.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320117.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10245 chr22 HAVANA stop_codon 21801030 21801032 . + 0 gene_id "ENSG00000169635.5"; transcript_id "ENST00000407464.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-003"; exon_number 3; exon_id "ENSE00001548117.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320117.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10246 chr22 HAVANA UTR 21771693 21771849 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000407464.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320117.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10247 chr22 HAVANA UTR 21797048 21797120 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000407464.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320117.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10248 chr22 HAVANA UTR 21801030 21805752 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000407464.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320117.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10249 chr22 HAVANA transcript 21774925 21803723 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000407598.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320116.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10250 chr22 HAVANA exon 21774925 21775046 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000407598.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-002"; exon_number 1; exon_id "ENSE00001692820.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320116.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10251 chr22 HAVANA exon 21797048 21797146 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000407598.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-002"; exon_number 2; exon_id "ENSE00001385660.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320116.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10252 chr22 HAVANA CDS 21797121 21797146 . + 0 gene_id "ENSG00000169635.5"; transcript_id "ENST00000407598.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-002"; exon_number 2; exon_id "ENSE00001385660.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320116.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10253 chr22 HAVANA start_codon 21797121 21797123 . + 0 gene_id "ENSG00000169635.5"; transcript_id "ENST00000407598.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-002"; exon_number 2; exon_id "ENSE00001385660.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320116.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10254 chr22 HAVANA exon 21799211 21803723 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000407598.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-002"; exon_number 3; exon_id "ENSE00001549045.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320116.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10255 chr22 HAVANA CDS 21799211 21801029 . + 1 gene_id "ENSG00000169635.5"; transcript_id "ENST00000407598.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-002"; exon_number 3; exon_id "ENSE00001549045.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320116.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10256 chr22 HAVANA stop_codon 21801030 21801032 . + 0 gene_id "ENSG00000169635.5"; transcript_id "ENST00000407598.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-002"; exon_number 3; exon_id "ENSE00001549045.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320116.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10257 chr22 HAVANA UTR 21774925 21775046 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000407598.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320116.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10258 chr22 HAVANA UTR 21797048 21797120 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000407598.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320116.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10259 chr22 HAVANA UTR 21801030 21803723 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000407598.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320116.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10260 chr22 HAVANA transcript 21796749 21805752 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000443632.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320061.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10261 chr22 HAVANA exon 21796749 21797146 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000443632.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-001"; exon_number 1; exon_id "ENSE00001729761.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320061.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10262 chr22 HAVANA CDS 21797121 21797146 . + 0 gene_id "ENSG00000169635.5"; transcript_id "ENST00000443632.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-001"; exon_number 1; exon_id "ENSE00001729761.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320061.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10263 chr22 HAVANA start_codon 21797121 21797123 . + 0 gene_id "ENSG00000169635.5"; transcript_id "ENST00000443632.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-001"; exon_number 1; exon_id "ENSE00001729761.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320061.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10264 chr22 HAVANA exon 21799211 21805752 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000443632.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-001"; exon_number 2; exon_id "ENSE00001548117.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320061.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10265 chr22 HAVANA CDS 21799211 21801029 . + 1 gene_id "ENSG00000169635.5"; transcript_id "ENST00000443632.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-001"; exon_number 2; exon_id "ENSE00001548117.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320061.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10266 chr22 HAVANA stop_codon 21801030 21801032 . + 0 gene_id "ENSG00000169635.5"; transcript_id "ENST00000443632.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-001"; exon_number 2; exon_id "ENSE00001548117.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320061.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10267 chr22 HAVANA UTR 21796749 21797120 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000443632.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320061.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10268 chr22 HAVANA UTR 21801030 21805752 . + . gene_id "ENSG00000169635.5"; transcript_id "ENST00000443632.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HIC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HIC2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13789.1"; havana_gene "OTTHUMG00000150781.3"; havana_transcript "OTTHUMT00000320061.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10269 chr22 HAVANA gene 21820712 21825558 . + . gene_id "ENSG00000206140.5"; transcript_id "ENSG00000206140.5"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "TMEM191C"; level 1; havana_gene "OTTHUMG00000150780.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10270 chr22 HAVANA transcript 21820712 21824224 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456303.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-001"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10271 chr22 HAVANA exon 21820712 21821903 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456303.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-001"; exon_number 1; exon_id "ENSE00001691175.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10272 chr22 HAVANA exon 21822183 21822306 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456303.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-001"; exon_number 2; exon_id "ENSE00001784284.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10273 chr22 HAVANA exon 21822604 21822720 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456303.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-001"; exon_number 3; exon_id "ENSE00001670323.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10274 chr22 HAVANA exon 21823068 21823124 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456303.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-001"; exon_number 4; exon_id "ENSE00001736433.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10275 chr22 HAVANA exon 21823233 21823292 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456303.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-001"; exon_number 5; exon_id "ENSE00001776224.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10276 chr22 HAVANA exon 21823563 21823635 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456303.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-001"; exon_number 6; exon_id "ENSE00003562872.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10277 chr22 HAVANA exon 21823783 21823823 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456303.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-001"; exon_number 7; exon_id "ENSE00003618946.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10278 chr22 HAVANA exon 21823931 21824224 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456303.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-001"; exon_number 8; exon_id "ENSE00001610249.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10279 chr22 ENSEMBL transcript 21820783 21821265 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000545656.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-202"; level 3; havana_gene "OTTHUMG00000150780.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10280 chr22 ENSEMBL exon 21820783 21821265 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000545656.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-202"; exon_number 1; exon_id "ENSE00002248307.1"; level 3; havana_gene "OTTHUMG00000150780.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10281 chr22 HAVANA transcript 21821551 21824222 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000415764.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-003"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320052.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10282 chr22 HAVANA exon 21821551 21821903 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000415764.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-003"; exon_number 1; exon_id "ENSE00001769228.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320052.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10283 chr22 HAVANA exon 21822183 21822720 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000415764.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-003"; exon_number 2; exon_id "ENSE00001712198.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320052.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10284 chr22 HAVANA exon 21823068 21823124 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000415764.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-003"; exon_number 3; exon_id "ENSE00001736433.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320052.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10285 chr22 HAVANA exon 21823233 21823635 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000415764.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-003"; exon_number 4; exon_id "ENSE00001729931.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320052.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10286 chr22 HAVANA exon 21823783 21824222 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000415764.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-003"; exon_number 5; exon_id "ENSE00001798024.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320052.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10287 chr22 HAVANA transcript 21821680 21825558 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000449424.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-004"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320053.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10288 chr22 HAVANA exon 21821680 21821903 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000449424.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-004"; exon_number 1; exon_id "ENSE00001696121.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320053.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10289 chr22 HAVANA exon 21822183 21822491 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000449424.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-004"; exon_number 2; exon_id "ENSE00001633482.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320053.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10290 chr22 HAVANA exon 21822604 21822720 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000449424.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-004"; exon_number 3; exon_id "ENSE00001670323.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320053.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10291 chr22 HAVANA exon 21823068 21823124 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000449424.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-004"; exon_number 4; exon_id "ENSE00001736433.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320053.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10292 chr22 HAVANA exon 21823233 21823351 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000449424.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-004"; exon_number 5; exon_id "ENSE00001765820.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320053.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10293 chr22 HAVANA exon 21823563 21823635 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000449424.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-004"; exon_number 6; exon_id "ENSE00003562872.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320053.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10294 chr22 HAVANA exon 21823783 21823823 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000449424.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-004"; exon_number 7; exon_id "ENSE00003618946.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320053.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10295 chr22 HAVANA exon 21823906 21825558 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000449424.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-004"; exon_number 8; exon_id "ENSE00003473944.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320053.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10296 chr22 HAVANA transcript 21821681 21824222 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456153.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-002"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320051.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10297 chr22 HAVANA exon 21821681 21822057 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456153.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-002"; exon_number 1; exon_id "ENSE00001603646.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320051.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10298 chr22 HAVANA exon 21822183 21822720 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456153.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-002"; exon_number 2; exon_id "ENSE00001712198.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320051.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10299 chr22 HAVANA exon 21823068 21823124 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456153.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-002"; exon_number 3; exon_id "ENSE00001736433.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320051.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10300 chr22 HAVANA exon 21823233 21823351 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456153.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-002"; exon_number 4; exon_id "ENSE00001765820.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320051.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10301 chr22 HAVANA exon 21823563 21823635 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456153.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-002"; exon_number 5; exon_id "ENSE00003562872.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320051.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10302 chr22 HAVANA exon 21823783 21823823 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456153.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-002"; exon_number 6; exon_id "ENSE00003618946.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320051.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10303 chr22 HAVANA exon 21823906 21824222 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000456153.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-002"; exon_number 7; exon_id "ENSE00000879272.6"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320051.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10304 chr22 HAVANA transcript 21821754 21824214 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000453397.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-006"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320055.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10305 chr22 HAVANA exon 21821754 21821903 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000453397.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-006"; exon_number 1; exon_id "ENSE00001744485.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320055.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10306 chr22 HAVANA exon 21822183 21822306 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000453397.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-006"; exon_number 2; exon_id "ENSE00001784284.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320055.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10307 chr22 HAVANA exon 21822441 21822491 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000453397.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-006"; exon_number 3; exon_id "ENSE00001797456.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320055.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10308 chr22 HAVANA exon 21822604 21822720 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000453397.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-006"; exon_number 4; exon_id "ENSE00001670323.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320055.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10309 chr22 HAVANA exon 21823068 21823124 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000453397.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-006"; exon_number 5; exon_id "ENSE00001736433.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320055.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10310 chr22 HAVANA exon 21823233 21823292 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000453397.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-006"; exon_number 6; exon_id "ENSE00001776224.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320055.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10311 chr22 HAVANA exon 21823419 21823483 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000453397.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-006"; exon_number 7; exon_id "ENSE00001643198.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320055.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10312 chr22 HAVANA exon 21823563 21823635 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000453397.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-006"; exon_number 8; exon_id "ENSE00003562872.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320055.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10313 chr22 HAVANA exon 21823783 21823823 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000453397.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-006"; exon_number 9; exon_id "ENSE00003618946.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320055.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10314 chr22 HAVANA exon 21823931 21824214 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000453397.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-006"; exon_number 10; exon_id "ENSE00001617226.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320055.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10315 chr22 HAVANA transcript 21821909 21823556 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000413877.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-005"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320054.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10316 chr22 HAVANA exon 21821909 21822057 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000413877.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-005"; exon_number 1; exon_id "ENSE00001697260.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320054.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10317 chr22 HAVANA exon 21822183 21822306 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000413877.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-005"; exon_number 2; exon_id "ENSE00001784284.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320054.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10318 chr22 HAVANA exon 21822604 21822720 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000413877.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-005"; exon_number 3; exon_id "ENSE00001670323.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320054.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10319 chr22 HAVANA exon 21823068 21823124 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000413877.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-005"; exon_number 4; exon_id "ENSE00001736433.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320054.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10320 chr22 HAVANA exon 21823233 21823556 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000413877.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-005"; exon_number 5; exon_id "ENSE00001728979.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320054.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10321 chr22 HAVANA transcript 21822205 21823461 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000432134.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-007"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320056.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10322 chr22 HAVANA exon 21822205 21822306 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000432134.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-007"; exon_number 1; exon_id "ENSE00001637438.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320056.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10323 chr22 HAVANA exon 21822441 21822491 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000432134.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-007"; exon_number 2; exon_id "ENSE00001797456.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320056.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10324 chr22 HAVANA exon 21822643 21822720 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000432134.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-007"; exon_number 3; exon_id "ENSE00001592824.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320056.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10325 chr22 HAVANA exon 21823068 21823124 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000432134.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-007"; exon_number 4; exon_id "ENSE00001736433.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320056.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10326 chr22 HAVANA exon 21823233 21823292 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000432134.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-007"; exon_number 5; exon_id "ENSE00001776224.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320056.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10327 chr22 HAVANA exon 21823419 21823461 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000432134.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-007"; exon_number 6; exon_id "ENSE00001637514.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320056.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10328 chr22 HAVANA transcript 21822387 21824214 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000417708.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-010"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320059.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10329 chr22 HAVANA exon 21822387 21822491 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000417708.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-010"; exon_number 1; exon_id "ENSE00001690776.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320059.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10330 chr22 HAVANA exon 21822643 21822720 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000417708.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-010"; exon_number 2; exon_id "ENSE00001592824.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320059.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10331 chr22 HAVANA exon 21823068 21823124 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000417708.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-010"; exon_number 3; exon_id "ENSE00001736433.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320059.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10332 chr22 HAVANA exon 21823233 21823292 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000417708.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-010"; exon_number 4; exon_id "ENSE00001776224.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320059.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10333 chr22 HAVANA exon 21823419 21823483 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000417708.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-010"; exon_number 5; exon_id "ENSE00001643198.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320059.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10334 chr22 HAVANA exon 21823563 21823635 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000417708.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-010"; exon_number 6; exon_id "ENSE00003562872.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320059.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10335 chr22 HAVANA exon 21823783 21823823 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000417708.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-010"; exon_number 7; exon_id "ENSE00003618946.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320059.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10336 chr22 HAVANA exon 21823931 21824214 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000417708.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-010"; exon_number 8; exon_id "ENSE00001617226.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320059.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10337 chr22 HAVANA transcript 21822577 21824208 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000427147.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-011"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320060.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10338 chr22 HAVANA exon 21822577 21822720 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000427147.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-011"; exon_number 1; exon_id "ENSE00001681796.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320060.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10339 chr22 HAVANA exon 21823068 21823124 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000427147.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-011"; exon_number 2; exon_id "ENSE00001736433.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320060.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10340 chr22 HAVANA exon 21823233 21823351 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000427147.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-011"; exon_number 3; exon_id "ENSE00001765820.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320060.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10341 chr22 HAVANA exon 21823563 21823823 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000427147.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-011"; exon_number 4; exon_id "ENSE00001700014.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320060.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10342 chr22 HAVANA exon 21823906 21824208 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000427147.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-011"; exon_number 5; exon_id "ENSE00001748975.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320060.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10343 chr22 HAVANA transcript 21823036 21824224 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000425458.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-008"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320057.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10344 chr22 HAVANA exon 21823036 21823124 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000425458.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-008"; exon_number 1; exon_id "ENSE00001786001.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320057.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10345 chr22 HAVANA exon 21823233 21823351 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000425458.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-008"; exon_number 2; exon_id "ENSE00001765820.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320057.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10346 chr22 HAVANA exon 21823563 21823823 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000425458.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-008"; exon_number 3; exon_id "ENSE00001700014.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320057.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10347 chr22 HAVANA exon 21823906 21824224 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000425458.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-008"; exon_number 4; exon_id "ENSE00001715017.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320057.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10348 chr22 HAVANA transcript 21823045 21824006 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000446867.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-009"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320058.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10349 chr22 HAVANA exon 21823045 21823124 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000446867.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-009"; exon_number 1; exon_id "ENSE00001729480.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320058.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10350 chr22 HAVANA exon 21823233 21823351 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000446867.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-009"; exon_number 2; exon_id "ENSE00001765820.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320058.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10351 chr22 HAVANA exon 21823563 21823635 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000446867.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-009"; exon_number 3; exon_id "ENSE00003562872.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320058.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10352 chr22 HAVANA exon 21823783 21824006 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000446867.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM191C-009"; exon_number 4; exon_id "ENSE00001639490.1"; level 2; havana_gene "OTTHUMG00000150780.1"; havana_transcript "OTTHUMT00000320058.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10353 chr22 ENSEMBL transcript 21823437 21825558 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000536718.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-201"; level 3; havana_gene "OTTHUMG00000150780.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10354 chr22 ENSEMBL exon 21823437 21823483 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000536718.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-201"; exon_number 1; exon_id "ENSE00002237863.1"; level 3; havana_gene "OTTHUMG00000150780.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10355 chr22 ENSEMBL exon 21823563 21823635 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000536718.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-201"; exon_number 2; exon_id "ENSE00003493214.1"; level 3; havana_gene "OTTHUMG00000150780.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10356 chr22 ENSEMBL exon 21823783 21823823 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000536718.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-201"; exon_number 3; exon_id "ENSE00003495193.1"; level 3; havana_gene "OTTHUMG00000150780.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10357 chr22 ENSEMBL exon 21823906 21825558 . + . gene_id "ENSG00000206140.5"; transcript_id "ENST00000536718.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "TMEM191C"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "TMEM191C-201"; exon_number 4; exon_id "ENSE00003581624.1"; level 3; havana_gene "OTTHUMG00000150780.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10358 chr22 HAVANA gene 21827289 21871822 . - . gene_id "ENSG00000183506.12"; transcript_id "ENSG00000183506.12"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2"; level 2; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10359 chr22 HAVANA transcript 21827289 21838423 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000486209.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-011"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334914.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10360 chr22 HAVANA exon 21838294 21838423 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000486209.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-011"; exon_number 1; exon_id "ENSE00003637973.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334914.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10361 chr22 HAVANA exon 21837309 21837379 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000486209.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-011"; exon_number 2; exon_id "ENSE00003623596.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334914.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10362 chr22 HAVANA exon 21834219 21834291 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000486209.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-011"; exon_number 3; exon_id "ENSE00003486820.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334914.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10363 chr22 HAVANA exon 21834048 21834118 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000486209.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-011"; exon_number 4; exon_id "ENSE00003667417.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334914.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10364 chr22 HAVANA exon 21832286 21832983 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000486209.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-011"; exon_number 5; exon_id "ENSE00001830837.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334914.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10365 chr22 HAVANA exon 21832079 21832204 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000486209.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-011"; exon_number 6; exon_id "ENSE00003629299.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334914.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10366 chr22 HAVANA exon 21829500 21831053 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000486209.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-011"; exon_number 7; exon_id "ENSE00001875489.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334914.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10367 chr22 HAVANA exon 21828886 21828969 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000486209.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-011"; exon_number 8; exon_id "ENSE00003487970.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334914.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10368 chr22 HAVANA exon 21827289 21827694 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000486209.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-011"; exon_number 9; exon_id "ENSE00001888660.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334914.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10369 chr22 HAVANA transcript 21827298 21831432 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000470274.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-013"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334916.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10370 chr22 HAVANA exon 21829500 21831432 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000470274.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-013"; exon_number 1; exon_id "ENSE00001942809.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334916.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10371 chr22 HAVANA exon 21828886 21828969 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000470274.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-013"; exon_number 2; exon_id "ENSE00003487970.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334916.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10372 chr22 HAVANA exon 21827298 21827694 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000470274.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-013"; exon_number 3; exon_id "ENSE00001821412.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334916.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10373 chr22 HAVANA transcript 21827298 21831506 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000477296.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-012"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334915.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10374 chr22 HAVANA exon 21830291 21831506 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000477296.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-012"; exon_number 1; exon_id "ENSE00001846338.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334915.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10375 chr22 HAVANA exon 21829500 21829589 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000477296.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-012"; exon_number 2; exon_id "ENSE00003612034.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334915.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10376 chr22 HAVANA exon 21828886 21828969 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000477296.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-012"; exon_number 3; exon_id "ENSE00003487970.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334915.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10377 chr22 HAVANA exon 21827298 21827694 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000477296.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-012"; exon_number 4; exon_id "ENSE00001821412.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334915.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10378 chr22 HAVANA transcript 21827300 21838423 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000463608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-010"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334913.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10379 chr22 HAVANA exon 21838294 21838423 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000463608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-010"; exon_number 1; exon_id "ENSE00003637973.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334913.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10380 chr22 HAVANA exon 21837309 21837379 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000463608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-010"; exon_number 2; exon_id "ENSE00003623596.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334913.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10381 chr22 HAVANA exon 21834219 21834291 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000463608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-010"; exon_number 3; exon_id "ENSE00003486820.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334913.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10382 chr22 HAVANA exon 21834048 21834118 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000463608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-010"; exon_number 4; exon_id "ENSE00003667417.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334913.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10383 chr22 HAVANA exon 21832874 21832983 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000463608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-010"; exon_number 5; exon_id "ENSE00003594928.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334913.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10384 chr22 HAVANA exon 21832286 21832390 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000463608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-010"; exon_number 6; exon_id "ENSE00003290832.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334913.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10385 chr22 HAVANA exon 21832079 21832204 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000463608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-010"; exon_number 7; exon_id "ENSE00003629299.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334913.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10386 chr22 HAVANA exon 21829500 21831030 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000463608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-010"; exon_number 8; exon_id "ENSE00001883258.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334913.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10387 chr22 HAVANA exon 21828886 21829089 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000463608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-010"; exon_number 9; exon_id "ENSE00003255133.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334913.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10388 chr22 HAVANA exon 21827300 21827694 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000463608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-010"; exon_number 10; exon_id "ENSE00001939985.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334913.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10389 chr22 HAVANA transcript 21827312 21842671 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10390 chr22 HAVANA exon 21842513 21842671 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 1; exon_id "ENSE00003144208.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10391 chr22 HAVANA exon 21842161 21842312 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 2; exon_id "ENSE00003610082.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10392 chr22 HAVANA exon 21841854 21841961 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 3; exon_id "ENSE00003579500.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10393 chr22 HAVANA exon 21841089 21841216 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 4; exon_id "ENSE00003610253.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10394 chr22 HAVANA exon 21838294 21838423 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 5; exon_id "ENSE00003637973.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10395 chr22 HAVANA exon 21837309 21837379 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 6; exon_id "ENSE00003623596.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10396 chr22 HAVANA exon 21834219 21834291 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 7; exon_id "ENSE00003486820.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10397 chr22 HAVANA exon 21834048 21834118 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 8; exon_id "ENSE00003667417.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10398 chr22 HAVANA exon 21832874 21832983 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 9; exon_id "ENSE00003594928.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10399 chr22 HAVANA exon 21832286 21832390 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 10; exon_id "ENSE00003290832.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10400 chr22 HAVANA exon 21832079 21832204 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 11; exon_id "ENSE00003629299.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10401 chr22 HAVANA exon 21830291 21831053 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 12; exon_id "ENSE00001905595.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10402 chr22 HAVANA exon 21829500 21829589 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 13; exon_id "ENSE00003612034.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10403 chr22 HAVANA exon 21828886 21828969 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 14; exon_id "ENSE00003487970.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10404 chr22 HAVANA exon 21827312 21827694 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000462560.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-008"; exon_number 15; exon_id "ENSE00001694938.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334911.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10405 chr22 HAVANA transcript 21827324 21871822 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10406 chr22 HAVANA exon 21871614 21871822 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 1; exon_id "ENSE00001679494.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10407 chr22 HAVANA exon 21846283 21846383 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 2; exon_id "ENSE00001684589.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10408 chr22 HAVANA exon 21842513 21842670 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 3; exon_id "ENSE00003376800.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10409 chr22 HAVANA exon 21842161 21842312 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 4; exon_id "ENSE00003610082.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10410 chr22 HAVANA exon 21841854 21841961 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 5; exon_id "ENSE00003579500.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10411 chr22 HAVANA exon 21841089 21841264 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 6; exon_id "ENSE00001883766.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10412 chr22 HAVANA exon 21838294 21838423 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 7; exon_id "ENSE00003637973.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10413 chr22 HAVANA exon 21837309 21837379 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 8; exon_id "ENSE00003623596.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10414 chr22 HAVANA exon 21834219 21834291 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 9; exon_id "ENSE00003486820.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10415 chr22 HAVANA exon 21834048 21834118 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 10; exon_id "ENSE00003667417.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10416 chr22 HAVANA exon 21832874 21832983 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 11; exon_id "ENSE00003594928.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10417 chr22 HAVANA exon 21832286 21832390 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 12; exon_id "ENSE00003290832.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10418 chr22 HAVANA exon 21832079 21832204 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 13; exon_id "ENSE00003629299.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10419 chr22 HAVANA exon 21830291 21830449 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 14; exon_id "ENSE00001710671.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10420 chr22 HAVANA exon 21829500 21829589 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 15; exon_id "ENSE00003612034.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10421 chr22 HAVANA exon 21828886 21828969 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 16; exon_id "ENSE00003487970.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10422 chr22 HAVANA exon 21827324 21827694 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000450651.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PI4KAP2-005"; exon_number 17; exon_id "ENSE00001778495.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334908.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10423 chr22 HAVANA transcript 21827348 21871822 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10424 chr22 HAVANA exon 21871614 21871822 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 1; exon_id "ENSE00001679494.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10425 chr22 HAVANA exon 21846283 21846383 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 2; exon_id "ENSE00001684589.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10426 chr22 HAVANA exon 21842513 21842670 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 3; exon_id "ENSE00003376800.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10427 chr22 HAVANA exon 21842161 21842312 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 4; exon_id "ENSE00003610082.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10428 chr22 HAVANA exon 21841854 21841961 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 5; exon_id "ENSE00003579500.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10429 chr22 HAVANA exon 21841089 21841216 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 6; exon_id "ENSE00003610253.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10430 chr22 HAVANA exon 21838294 21838423 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 7; exon_id "ENSE00003637973.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10431 chr22 HAVANA exon 21837309 21837379 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 8; exon_id "ENSE00003623596.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10432 chr22 HAVANA exon 21834219 21834291 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 9; exon_id "ENSE00003486820.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10433 chr22 HAVANA exon 21834048 21834118 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 10; exon_id "ENSE00003667417.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10434 chr22 HAVANA exon 21832874 21832983 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 11; exon_id "ENSE00003594928.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10435 chr22 HAVANA exon 21832286 21832450 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 12; exon_id "ENSE00003641919.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10436 chr22 HAVANA exon 21832079 21832204 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 13; exon_id "ENSE00003629299.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10437 chr22 HAVANA exon 21830933 21831053 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 14; exon_id "ENSE00003668815.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10438 chr22 HAVANA exon 21830281 21830449 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 15; exon_id "ENSE00003617769.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10439 chr22 HAVANA exon 21829500 21829589 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 16; exon_id "ENSE00003612034.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10440 chr22 HAVANA exon 21828886 21828969 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 17; exon_id "ENSE00003487970.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10441 chr22 HAVANA exon 21827348 21827694 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000360806.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-001"; exon_number 18; exon_id "ENSE00001958470.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000320224.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10442 chr22 HAVANA transcript 21827365 21842196 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10443 chr22 HAVANA exon 21842161 21842196 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; exon_number 1; exon_id "ENSE00001932449.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10444 chr22 HAVANA exon 21841854 21841961 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; exon_number 2; exon_id "ENSE00003579500.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10445 chr22 HAVANA exon 21841089 21841264 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; exon_number 3; exon_id "ENSE00001883766.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10446 chr22 HAVANA exon 21838294 21838423 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; exon_number 4; exon_id "ENSE00003637973.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10447 chr22 HAVANA exon 21837309 21837379 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; exon_number 5; exon_id "ENSE00003623596.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10448 chr22 HAVANA exon 21834219 21834291 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; exon_number 6; exon_id "ENSE00003486820.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10449 chr22 HAVANA exon 21834048 21834118 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; exon_number 7; exon_id "ENSE00003667417.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10450 chr22 HAVANA exon 21832874 21832983 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; exon_number 8; exon_id "ENSE00003594928.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10451 chr22 HAVANA exon 21832286 21832390 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; exon_number 9; exon_id "ENSE00003290832.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10452 chr22 HAVANA exon 21832079 21832204 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; exon_number 10; exon_id "ENSE00003629299.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10453 chr22 HAVANA exon 21830291 21831053 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; exon_number 11; exon_id "ENSE00001905595.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10454 chr22 HAVANA exon 21829500 21829589 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; exon_number 12; exon_id "ENSE00003612034.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10455 chr22 HAVANA exon 21828886 21828969 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; exon_number 13; exon_id "ENSE00003487970.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10456 chr22 HAVANA exon 21827365 21827694 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000494740.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-009"; exon_number 14; exon_id "ENSE00001809435.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10457 chr22 ENSEMBL transcript 21827643 21842649 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10458 chr22 ENSEMBL exon 21842513 21842649 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 1; exon_id "ENSE00002266702.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10459 chr22 ENSEMBL exon 21842161 21842312 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 2; exon_id "ENSE00003520626.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10460 chr22 ENSEMBL exon 21841854 21841961 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 3; exon_id "ENSE00003496374.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10461 chr22 ENSEMBL exon 21841089 21841216 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 4; exon_id "ENSE00003634551.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10462 chr22 ENSEMBL exon 21838294 21838423 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 5; exon_id "ENSE00003646814.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10463 chr22 ENSEMBL exon 21837309 21837379 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 6; exon_id "ENSE00003630633.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10464 chr22 ENSEMBL exon 21834219 21834291 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 7; exon_id "ENSE00003678626.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10465 chr22 ENSEMBL exon 21834048 21834118 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 8; exon_id "ENSE00003501619.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10466 chr22 ENSEMBL exon 21832874 21832983 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 9; exon_id "ENSE00003564008.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10467 chr22 ENSEMBL exon 21832286 21832450 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 10; exon_id "ENSE00003678917.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10468 chr22 ENSEMBL exon 21832079 21832204 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 11; exon_id "ENSE00003612503.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10469 chr22 ENSEMBL exon 21830933 21831053 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 12; exon_id "ENSE00003657230.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10470 chr22 ENSEMBL exon 21830281 21830449 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 13; exon_id "ENSE00003676394.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10471 chr22 ENSEMBL exon 21829500 21829589 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 14; exon_id "ENSE00003648110.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10472 chr22 ENSEMBL exon 21828886 21828969 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 15; exon_id "ENSE00003688488.1"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10473 chr22 ENSEMBL exon 21827643 21827694 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000546263.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PI4KAP2-201"; exon_number 16; exon_id "ENSE00001358942.7"; level 3; havana_gene "OTTHUMG00000150827.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10474 chr22 HAVANA transcript 21831669 21844900 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000480319.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-002"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10475 chr22 HAVANA exon 21842513 21844900 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000480319.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-002"; exon_number 1; exon_id "ENSE00001953831.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10476 chr22 HAVANA exon 21842161 21842312 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000480319.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-002"; exon_number 2; exon_id "ENSE00003610082.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10477 chr22 HAVANA exon 21841854 21841961 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000480319.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-002"; exon_number 3; exon_id "ENSE00003579500.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10478 chr22 HAVANA exon 21841089 21841216 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000480319.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-002"; exon_number 4; exon_id "ENSE00003610253.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10479 chr22 HAVANA exon 21838294 21838423 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000480319.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-002"; exon_number 5; exon_id "ENSE00003637973.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10480 chr22 HAVANA exon 21837309 21837379 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000480319.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-002"; exon_number 6; exon_id "ENSE00003623596.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10481 chr22 HAVANA exon 21834219 21834291 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000480319.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-002"; exon_number 7; exon_id "ENSE00003486820.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10482 chr22 HAVANA exon 21834048 21834118 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000480319.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-002"; exon_number 8; exon_id "ENSE00003667417.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10483 chr22 HAVANA exon 21832874 21832983 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000480319.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-002"; exon_number 9; exon_id "ENSE00003594928.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10484 chr22 HAVANA exon 21832286 21832390 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000480319.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-002"; exon_number 10; exon_id "ENSE00003290832.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10485 chr22 HAVANA exon 21831669 21832204 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000480319.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-002"; exon_number 11; exon_id "ENSE00001810954.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10486 chr22 HAVANA transcript 21831669 21868544 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000467443.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-004"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10487 chr22 HAVANA exon 21868419 21868544 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000467443.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-004"; exon_number 1; exon_id "ENSE00001872883.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10488 chr22 HAVANA exon 21846283 21846383 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000467443.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-004"; exon_number 2; exon_id "ENSE00001684589.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10489 chr22 HAVANA exon 21842513 21842670 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000467443.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-004"; exon_number 3; exon_id "ENSE00003376800.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10490 chr22 HAVANA exon 21842161 21842312 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000467443.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-004"; exon_number 4; exon_id "ENSE00003610082.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10491 chr22 HAVANA exon 21841854 21841961 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000467443.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-004"; exon_number 5; exon_id "ENSE00003579500.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10492 chr22 HAVANA exon 21841089 21841216 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000467443.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-004"; exon_number 6; exon_id "ENSE00003610253.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10493 chr22 HAVANA exon 21838294 21838423 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000467443.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-004"; exon_number 7; exon_id "ENSE00003637973.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10494 chr22 HAVANA exon 21837309 21837379 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000467443.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-004"; exon_number 8; exon_id "ENSE00003623596.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10495 chr22 HAVANA exon 21834219 21834291 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000467443.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-004"; exon_number 9; exon_id "ENSE00003486820.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10496 chr22 HAVANA exon 21834048 21834118 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000467443.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-004"; exon_number 10; exon_id "ENSE00003667417.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10497 chr22 HAVANA exon 21832874 21832983 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000467443.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-004"; exon_number 11; exon_id "ENSE00003594928.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10498 chr22 HAVANA exon 21832286 21832390 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000467443.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-004"; exon_number 12; exon_id "ENSE00003290832.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10499 chr22 HAVANA exon 21831669 21832204 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000467443.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-004"; exon_number 13; exon_id "ENSE00001810954.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334907.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10500 chr22 HAVANA transcript 21831702 21871809 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000479693.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-003"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10501 chr22 HAVANA exon 21871614 21871809 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000479693.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-003"; exon_number 1; exon_id "ENSE00001811423.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10502 chr22 HAVANA exon 21846283 21846383 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000479693.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-003"; exon_number 2; exon_id "ENSE00001684589.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10503 chr22 HAVANA exon 21842513 21842670 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000479693.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-003"; exon_number 3; exon_id "ENSE00003376800.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10504 chr22 HAVANA exon 21842161 21842312 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000479693.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-003"; exon_number 4; exon_id "ENSE00003610082.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10505 chr22 HAVANA exon 21841854 21841961 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000479693.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-003"; exon_number 5; exon_id "ENSE00003579500.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10506 chr22 HAVANA exon 21841089 21841216 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000479693.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-003"; exon_number 6; exon_id "ENSE00003610253.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10507 chr22 HAVANA exon 21838294 21838423 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000479693.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-003"; exon_number 7; exon_id "ENSE00003637973.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10508 chr22 HAVANA exon 21837309 21837379 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000479693.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-003"; exon_number 8; exon_id "ENSE00003623596.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10509 chr22 HAVANA exon 21834219 21834291 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000479693.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-003"; exon_number 9; exon_id "ENSE00003486820.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10510 chr22 HAVANA exon 21834048 21834118 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000479693.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-003"; exon_number 10; exon_id "ENSE00003667417.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10511 chr22 HAVANA exon 21832874 21832983 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000479693.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-003"; exon_number 11; exon_id "ENSE00003594928.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10512 chr22 HAVANA exon 21832286 21832390 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000479693.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-003"; exon_number 12; exon_id "ENSE00003290832.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10513 chr22 HAVANA exon 21831702 21832204 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000479693.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-003"; exon_number 13; exon_id "ENSE00001812313.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10514 chr22 HAVANA transcript 21846265 21868512 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000491562.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-007"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10515 chr22 HAVANA exon 21868423 21868512 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000491562.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-007"; exon_number 1; exon_id "ENSE00001926092.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10516 chr22 HAVANA exon 21846265 21846383 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000491562.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-007"; exon_number 2; exon_id "ENSE00001917139.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10517 chr22 HAVANA transcript 21846265 21871770 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000476537.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-006"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10518 chr22 HAVANA exon 21871614 21871770 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000476537.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-006"; exon_number 1; exon_id "ENSE00001831159.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10519 chr22 HAVANA exon 21846265 21846383 . - . gene_id "ENSG00000183506.12"; transcript_id "ENST00000476537.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PI4KAP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PI4KAP2-006"; exon_number 2; exon_id "ENSE00001917139.1"; level 2; havana_gene "OTTHUMG00000150827.4"; havana_transcript "OTTHUMT00000334909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10520 chr22 ENSEMBL gene 21878047 21878123 . - . gene_id "ENSG00000252799.1"; transcript_id "ENSG00000252799.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10521 chr22 ENSEMBL transcript 21878047 21878123 . - . gene_id "ENSG00000252799.1"; transcript_id "ENST00000516990.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.457-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10522 chr22 ENSEMBL exon 21878047 21878123 . - . gene_id "ENSG00000252799.1"; transcript_id "ENST00000516990.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.457-201"; exon_number 1; exon_id "ENSE00002089267.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10523 chr22 ENSEMBL gene 21899186 21899328 . + . gene_id "ENSG00000252143.1"; transcript_id "ENSG00000252143.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA17"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA17"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10524 chr22 ENSEMBL transcript 21899186 21899328 . + . gene_id "ENSG00000252143.1"; transcript_id "ENST00000516334.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA17"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA17.2-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10525 chr22 ENSEMBL exon 21899186 21899328 . + . gene_id "ENSG00000252143.1"; transcript_id "ENST00000516334.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA17"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA17.2-201"; exon_number 1; exon_id "ENSE00002088611.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10526 chr22 ENSEMBL gene 21899414 21899496 . + . gene_id "ENSG00000252605.1"; transcript_id "ENSG00000252605.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA18"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA18"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10527 chr22 ENSEMBL transcript 21899414 21899496 . + . gene_id "ENSG00000252605.1"; transcript_id "ENST00000516796.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA18"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA18.4-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10528 chr22 ENSEMBL exon 21899414 21899496 . + . gene_id "ENSG00000252605.1"; transcript_id "ENST00000516796.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SCARNA18"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SCARNA18.4-201"; exon_number 1; exon_id "ENSE00002089073.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10529 chr22 ENSEMBL gene 21899633 21899933 . - . gene_id "ENSG00000222352.1"; transcript_id "ENSG00000222352.1"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SKP221"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SKP221"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10530 chr22 ENSEMBL transcript 21899633 21899933 . - . gene_id "ENSG00000222352.1"; transcript_id "ENST00000410420.1"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SKP221"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SKP221-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10531 chr22 ENSEMBL exon 21899633 21899933 . - . gene_id "ENSG00000222352.1"; transcript_id "ENST00000410420.1"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SKP221"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SKP221-201"; exon_number 1; exon_id "ENSE00001809053.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10532 chr22 HAVANA gene 21899646 21905750 . - . gene_id "ENSG00000183246.6"; transcript_id "ENSG00000183246.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C"; level 2; havana_gene "OTTHUMG00000150825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10533 chr22 HAVANA transcript 21899646 21905120 . - . gene_id "ENSG00000183246.6"; transcript_id "ENST00000331505.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C-001"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150825.1"; havana_transcript "OTTHUMT00000320222.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10534 chr22 HAVANA exon 21899646 21905120 . - . gene_id "ENSG00000183246.6"; transcript_id "ENST00000331505.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C-001"; exon_number 1; exon_id "ENSE00001719744.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150825.1"; havana_transcript "OTTHUMT00000320222.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10535 chr22 HAVANA CDS 21900349 21904983 . - 0 gene_id "ENSG00000183246.6"; transcript_id "ENST00000331505.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C-001"; exon_number 1; exon_id "ENSE00001719744.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150825.1"; havana_transcript "OTTHUMT00000320222.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10536 chr22 HAVANA start_codon 21904981 21904983 . - 0 gene_id "ENSG00000183246.6"; transcript_id "ENST00000331505.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C-001"; exon_number 1; exon_id "ENSE00001719744.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150825.1"; havana_transcript "OTTHUMT00000320222.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10537 chr22 HAVANA stop_codon 21900346 21900348 . - 0 gene_id "ENSG00000183246.6"; transcript_id "ENST00000331505.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C-001"; exon_number 1; exon_id "ENSE00001719744.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150825.1"; havana_transcript "OTTHUMT00000320222.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10538 chr22 HAVANA UTR 21899646 21900348 . - . gene_id "ENSG00000183246.6"; transcript_id "ENST00000331505.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C-001"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150825.1"; havana_transcript "OTTHUMT00000320222.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10539 chr22 HAVANA UTR 21904984 21905120 . - . gene_id "ENSG00000183246.6"; transcript_id "ENST00000331505.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C-001"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150825.1"; havana_transcript "OTTHUMT00000320222.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10540 chr22 ENSEMBL transcript 21899967 21905750 . - . gene_id "ENSG00000183246.6"; transcript_id "ENST00000433039.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C-201"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS46669.1"; havana_gene "OTTHUMG00000150825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10541 chr22 ENSEMBL exon 21899967 21905750 . - . gene_id "ENSG00000183246.6"; transcript_id "ENST00000433039.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C-201"; exon_number 1; exon_id "ENSE00001685980.1"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS46669.1"; havana_gene "OTTHUMG00000150825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10542 chr22 ENSEMBL CDS 21900349 21905265 . - 0 gene_id "ENSG00000183246.6"; transcript_id "ENST00000433039.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C-201"; exon_number 1; exon_id "ENSE00001685980.1"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS46669.1"; havana_gene "OTTHUMG00000150825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10543 chr22 ENSEMBL start_codon 21905263 21905265 . - 0 gene_id "ENSG00000183246.6"; transcript_id "ENST00000433039.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C-201"; exon_number 1; exon_id "ENSE00001685980.1"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS46669.1"; havana_gene "OTTHUMG00000150825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10544 chr22 ENSEMBL stop_codon 21900346 21900348 . - 0 gene_id "ENSG00000183246.6"; transcript_id "ENST00000433039.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C-201"; exon_number 1; exon_id "ENSE00001685980.1"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS46669.1"; havana_gene "OTTHUMG00000150825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10545 chr22 ENSEMBL UTR 21899967 21900348 . - . gene_id "ENSG00000183246.6"; transcript_id "ENST00000433039.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C-201"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS46669.1"; havana_gene "OTTHUMG00000150825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10546 chr22 ENSEMBL UTR 21905266 21905750 . - . gene_id "ENSG00000183246.6"; transcript_id "ENST00000433039.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIMBP3C"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIMBP3C-201"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS46669.1"; havana_gene "OTTHUMG00000150825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10547 chr22 HAVANA gene 21903736 21978323 . + . gene_id "ENSG00000185651.10"; transcript_id "ENSG00000185651.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3"; level 2; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10548 chr22 ENSEMBL transcript 21903736 21976541 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000458578.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58795.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10549 chr22 ENSEMBL exon 21903736 21903939 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000458578.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-201"; exon_number 1; exon_id "ENSE00001772595.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58795.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10550 chr22 ENSEMBL CDS 21903739 21903939 . + 0 gene_id "ENSG00000185651.10"; transcript_id "ENST00000458578.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-201"; exon_number 1; exon_id "ENSE00001772595.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58795.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10551 chr22 ENSEMBL start_codon 21903739 21903741 . + 0 gene_id "ENSG00000185651.10"; transcript_id "ENST00000458578.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-201"; exon_number 1; exon_id "ENSE00001772595.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58795.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10552 chr22 ENSEMBL exon 21947150 21947245 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000458578.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-201"; exon_number 2; exon_id "ENSE00003653912.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58795.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10553 chr22 ENSEMBL CDS 21947150 21947245 . + 0 gene_id "ENSG00000185651.10"; transcript_id "ENST00000458578.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-201"; exon_number 2; exon_id "ENSE00003653912.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58795.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10554 chr22 ENSEMBL exon 21965146 21965332 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000458578.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-201"; exon_number 3; exon_id "ENSE00003575779.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58795.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10555 chr22 ENSEMBL CDS 21965146 21965332 . + 0 gene_id "ENSG00000185651.10"; transcript_id "ENST00000458578.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-201"; exon_number 3; exon_id "ENSE00003575779.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58795.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10556 chr22 ENSEMBL exon 21975804 21976541 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000458578.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-201"; exon_number 4; exon_id "ENSE00002209078.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58795.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10557 chr22 ENSEMBL CDS 21975804 21975955 . + 2 gene_id "ENSG00000185651.10"; transcript_id "ENST00000458578.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-201"; exon_number 4; exon_id "ENSE00002209078.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58795.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10558 chr22 ENSEMBL stop_codon 21975956 21975958 . + 0 gene_id "ENSG00000185651.10"; transcript_id "ENST00000458578.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-201"; exon_number 4; exon_id "ENSE00002209078.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58795.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10559 chr22 ENSEMBL UTR 21903736 21903738 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000458578.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58795.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10560 chr22 ENSEMBL UTR 21975956 21976541 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000458578.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58795.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10561 chr22 HAVANA transcript 21921836 21978323 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000342192.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13790.1"; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10562 chr22 HAVANA exon 21921836 21922060 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000342192.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-001"; exon_number 1; exon_id "ENSE00001369259.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13790.1"; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10563 chr22 HAVANA CDS 21922034 21922060 . + 0 gene_id "ENSG00000185651.10"; transcript_id "ENST00000342192.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-001"; exon_number 1; exon_id "ENSE00001369259.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13790.1"; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10564 chr22 HAVANA start_codon 21922034 21922036 . + 0 gene_id "ENSG00000185651.10"; transcript_id "ENST00000342192.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-001"; exon_number 1; exon_id "ENSE00001369259.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13790.1"; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10565 chr22 HAVANA exon 21947150 21947245 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000342192.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-001"; exon_number 2; exon_id "ENSE00003653912.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13790.1"; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10566 chr22 HAVANA CDS 21947150 21947245 . + 0 gene_id "ENSG00000185651.10"; transcript_id "ENST00000342192.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-001"; exon_number 2; exon_id "ENSE00003653912.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13790.1"; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10567 chr22 HAVANA exon 21965146 21965332 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000342192.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-001"; exon_number 3; exon_id "ENSE00003575779.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13790.1"; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10568 chr22 HAVANA CDS 21965146 21965332 . + 0 gene_id "ENSG00000185651.10"; transcript_id "ENST00000342192.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-001"; exon_number 3; exon_id "ENSE00003575779.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13790.1"; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10569 chr22 HAVANA exon 21975804 21978323 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000342192.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-001"; exon_number 4; exon_id "ENSE00003653159.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13790.1"; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10570 chr22 HAVANA CDS 21975804 21975955 . + 2 gene_id "ENSG00000185651.10"; transcript_id "ENST00000342192.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-001"; exon_number 4; exon_id "ENSE00003653159.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13790.1"; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10571 chr22 HAVANA stop_codon 21975956 21975958 . + 0 gene_id "ENSG00000185651.10"; transcript_id "ENST00000342192.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-001"; exon_number 4; exon_id "ENSE00003653159.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13790.1"; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10572 chr22 HAVANA UTR 21921836 21922033 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000342192.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13790.1"; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10573 chr22 HAVANA UTR 21975956 21978323 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000342192.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13790.1"; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10574 chr22 HAVANA transcript 21922019 21978323 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000496722.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UBE2L3-002"; level 2; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320220.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10575 chr22 HAVANA exon 21922019 21922666 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000496722.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UBE2L3-002"; exon_number 1; exon_id "ENSE00001832256.1"; level 2; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320220.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10576 chr22 HAVANA exon 21947150 21947245 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000496722.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UBE2L3-002"; exon_number 2; exon_id "ENSE00003528872.1"; level 2; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320220.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10577 chr22 HAVANA exon 21965146 21965332 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000496722.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UBE2L3-002"; exon_number 3; exon_id "ENSE00003573291.1"; level 2; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320220.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10578 chr22 HAVANA exon 21975804 21978323 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000496722.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UBE2L3-002"; exon_number 4; exon_id "ENSE00003504136.1"; level 2; havana_gene "OTTHUMG00000150823.1"; havana_transcript "OTTHUMT00000320220.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10579 chr22 ENSEMBL transcript 21922026 21976638 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000545681.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58796.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10580 chr22 ENSEMBL exon 21922026 21922060 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000545681.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-202"; exon_number 1; exon_id "ENSE00002218317.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58796.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10581 chr22 ENSEMBL CDS 21922034 21922060 . + 0 gene_id "ENSG00000185651.10"; transcript_id "ENST00000545681.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-202"; exon_number 1; exon_id "ENSE00002218317.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58796.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10582 chr22 ENSEMBL start_codon 21922034 21922036 . + 0 gene_id "ENSG00000185651.10"; transcript_id "ENST00000545681.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-202"; exon_number 1; exon_id "ENSE00002218317.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58796.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10583 chr22 ENSEMBL exon 21965146 21965332 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000545681.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-202"; exon_number 2; exon_id "ENSE00003575779.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58796.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10584 chr22 ENSEMBL CDS 21965146 21965332 . + 0 gene_id "ENSG00000185651.10"; transcript_id "ENST00000545681.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-202"; exon_number 2; exon_id "ENSE00003575779.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58796.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10585 chr22 ENSEMBL exon 21975804 21976638 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000545681.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-202"; exon_number 3; exon_id "ENSE00002216780.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58796.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10586 chr22 ENSEMBL CDS 21975804 21975955 . + 2 gene_id "ENSG00000185651.10"; transcript_id "ENST00000545681.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-202"; exon_number 3; exon_id "ENSE00002216780.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58796.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10587 chr22 ENSEMBL stop_codon 21975956 21975958 . + 0 gene_id "ENSG00000185651.10"; transcript_id "ENST00000545681.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-202"; exon_number 3; exon_id "ENSE00002216780.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58796.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10588 chr22 ENSEMBL UTR 21922026 21922033 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000545681.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58796.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10589 chr22 ENSEMBL UTR 21975956 21976638 . + . gene_id "ENSG00000185651.10"; transcript_id "ENST00000545681.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2L3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2L3-202"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS58796.1"; havana_gene "OTTHUMG00000150823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10590 chr22 HAVANA gene 21982378 21984353 . - . gene_id "ENSG00000161179.9"; transcript_id "ENSG00000161179.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC"; level 2; havana_gene "OTTHUMG00000150822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10591 chr22 HAVANA transcript 21982378 21984301 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000464015.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-006"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320218.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10592 chr22 HAVANA exon 21984140 21984301 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000464015.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-006"; exon_number 1; exon_id "ENSE00001943856.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320218.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10593 chr22 HAVANA exon 21983299 21984050 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000464015.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-006"; exon_number 2; exon_id "ENSE00001851246.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320218.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10594 chr22 HAVANA exon 21982378 21983076 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000464015.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-006"; exon_number 3; exon_id "ENSE00003663156.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320218.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10595 chr22 HAVANA transcript 21982378 21984320 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000468686.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-004"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320216.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10596 chr22 HAVANA exon 21983597 21984320 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000468686.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-004"; exon_number 1; exon_id "ENSE00001895035.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320216.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10597 chr22 HAVANA exon 21982378 21983076 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000468686.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-004"; exon_number 2; exon_id "ENSE00003663156.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320216.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10598 chr22 HAVANA transcript 21982378 21984353 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10599 chr22 HAVANA exon 21984140 21984353 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; exon_number 1; exon_id "ENSE00001872160.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10600 chr22 HAVANA CDS 21984140 21984303 . - 0 gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; exon_number 1; exon_id "ENSE00001872160.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10601 chr22 HAVANA start_codon 21984301 21984303 . - 0 gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; exon_number 1; exon_id "ENSE00001872160.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10602 chr22 HAVANA exon 21983891 21984050 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; exon_number 2; exon_id "ENSE00003677110.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10603 chr22 HAVANA CDS 21983891 21984050 . - 1 gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; exon_number 2; exon_id "ENSE00003677110.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10604 chr22 HAVANA exon 21983597 21983696 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; exon_number 3; exon_id "ENSE00003509849.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10605 chr22 HAVANA CDS 21983597 21983696 . - 0 gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; exon_number 3; exon_id "ENSE00003509849.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10606 chr22 HAVANA exon 21983299 21983476 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; exon_number 4; exon_id "ENSE00003630670.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10607 chr22 HAVANA CDS 21983299 21983476 . - 2 gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; exon_number 4; exon_id "ENSE00003630670.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10608 chr22 HAVANA exon 21982378 21983076 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; exon_number 5; exon_id "ENSE00003683671.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10609 chr22 HAVANA CDS 21982710 21983076 . - 1 gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; exon_number 5; exon_id "ENSE00003683671.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10610 chr22 HAVANA stop_codon 21982707 21982709 . - 0 gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; exon_number 5; exon_id "ENSE00003683671.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10611 chr22 HAVANA UTR 21984304 21984353 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10612 chr22 HAVANA UTR 21982378 21982709 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000292778.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33613.1"; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10613 chr22 HAVANA transcript 21982378 21984353 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10614 chr22 HAVANA exon 21984140 21984353 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; exon_number 1; exon_id "ENSE00001872160.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10615 chr22 HAVANA CDS 21984140 21984303 . - 0 gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; exon_number 1; exon_id "ENSE00001872160.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10616 chr22 HAVANA start_codon 21984301 21984303 . - 0 gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; exon_number 1; exon_id "ENSE00001872160.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10617 chr22 HAVANA exon 21983832 21984050 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; exon_number 2; exon_id "ENSE00001597970.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10618 chr22 HAVANA CDS 21983832 21984050 . - 1 gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; exon_number 2; exon_id "ENSE00001597970.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10619 chr22 HAVANA exon 21983597 21983696 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; exon_number 3; exon_id "ENSE00003494776.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10620 chr22 HAVANA CDS 21983672 21983696 . - 1 gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; exon_number 3; exon_id "ENSE00003494776.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10621 chr22 HAVANA stop_codon 21983669 21983671 . - 0 gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; exon_number 3; exon_id "ENSE00003494776.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10622 chr22 HAVANA exon 21983299 21983476 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; exon_number 4; exon_id "ENSE00003675798.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10623 chr22 HAVANA exon 21982378 21983076 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; exon_number 5; exon_id "ENSE00003663156.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10624 chr22 HAVANA UTR 21984304 21984353 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10625 chr22 HAVANA UTR 21983597 21983671 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10626 chr22 HAVANA UTR 21983299 21983476 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10627 chr22 HAVANA UTR 21982378 21983076 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000415762.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "YDJC-002"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320214.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10628 chr22 ENSEMBL transcript 21982381 21984325 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000398873.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10629 chr22 ENSEMBL exon 21984140 21984325 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000398873.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-201"; exon_number 1; exon_id "ENSE00001535339.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000150822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10630 chr22 ENSEMBL CDS 21984140 21984303 . - 0 gene_id "ENSG00000161179.9"; transcript_id "ENST00000398873.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-201"; exon_number 1; exon_id "ENSE00001535339.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000150822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10631 chr22 ENSEMBL start_codon 21984301 21984303 . - 0 gene_id "ENSG00000161179.9"; transcript_id "ENST00000398873.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-201"; exon_number 1; exon_id "ENSE00001535339.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000150822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10632 chr22 ENSEMBL exon 21983891 21984050 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000398873.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-201"; exon_number 2; exon_id "ENSE00003677110.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10633 chr22 ENSEMBL CDS 21983891 21984050 . - 1 gene_id "ENSG00000161179.9"; transcript_id "ENST00000398873.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-201"; exon_number 2; exon_id "ENSE00003677110.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10634 chr22 ENSEMBL exon 21983597 21983696 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000398873.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-201"; exon_number 3; exon_id "ENSE00003509849.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10635 chr22 ENSEMBL CDS 21983597 21983696 . - 0 gene_id "ENSG00000161179.9"; transcript_id "ENST00000398873.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-201"; exon_number 3; exon_id "ENSE00003509849.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10636 chr22 ENSEMBL exon 21982381 21983076 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000398873.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-201"; exon_number 4; exon_id "ENSE00001625914.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10637 chr22 ENSEMBL CDS 21983054 21983076 . - 2 gene_id "ENSG00000161179.9"; transcript_id "ENST00000398873.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-201"; exon_number 4; exon_id "ENSE00001625914.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10638 chr22 ENSEMBL stop_codon 21983051 21983053 . - 0 gene_id "ENSG00000161179.9"; transcript_id "ENST00000398873.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-201"; exon_number 4; exon_id "ENSE00001625914.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10639 chr22 ENSEMBL UTR 21984304 21984325 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000398873.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10640 chr22 ENSEMBL UTR 21982381 21983053 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000398873.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YDJC-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150822.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10641 chr22 HAVANA transcript 21982403 21984327 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000473985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-003"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10642 chr22 HAVANA exon 21984140 21984327 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000473985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-003"; exon_number 1; exon_id "ENSE00001897154.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10643 chr22 HAVANA exon 21983597 21984050 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000473985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-003"; exon_number 2; exon_id "ENSE00001863206.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10644 chr22 HAVANA exon 21983299 21983476 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000473985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-003"; exon_number 3; exon_id "ENSE00003675798.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10645 chr22 HAVANA exon 21982403 21983076 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000473985.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-003"; exon_number 4; exon_id "ENSE00001909659.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320215.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10646 chr22 HAVANA transcript 21982411 21984303 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000482998.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-005"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320217.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10647 chr22 HAVANA exon 21984140 21984303 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000482998.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-005"; exon_number 1; exon_id "ENSE00001883838.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320217.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10648 chr22 HAVANA exon 21983891 21984050 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000482998.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-005"; exon_number 2; exon_id "ENSE00003688159.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320217.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10649 chr22 HAVANA exon 21983299 21983696 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000482998.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-005"; exon_number 3; exon_id "ENSE00001839271.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320217.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10650 chr22 HAVANA exon 21982411 21983076 . - . gene_id "ENSG00000161179.9"; transcript_id "ENST00000482998.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YDJC"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YDJC-005"; exon_number 4; exon_id "ENSE00001813477.1"; level 2; havana_gene "OTTHUMG00000150822.1"; havana_transcript "OTTHUMT00000320217.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10651 chr22 HAVANA gene 21987005 21991616 . + . gene_id "ENSG00000161180.6"; transcript_id "ENSG00000161180.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116"; level 2; havana_gene "OTTHUMG00000150821.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10652 chr22 HAVANA transcript 21987005 21990091 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000607942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-003"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000472374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10653 chr22 HAVANA exon 21987005 21987116 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000607942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-003"; exon_number 1; exon_id "ENSE00003704405.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000472374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10654 chr22 HAVANA exon 21987409 21987542 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000607942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-003"; exon_number 2; exon_id "ENSE00001136193.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000472374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10655 chr22 HAVANA CDS 21987471 21987542 . + 0 gene_id "ENSG00000161180.6"; transcript_id "ENST00000607942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-003"; exon_number 2; exon_id "ENSE00001136193.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000472374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10656 chr22 HAVANA start_codon 21987471 21987473 . + 0 gene_id "ENSG00000161180.6"; transcript_id "ENST00000607942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-003"; exon_number 2; exon_id "ENSE00001136193.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000472374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10657 chr22 HAVANA exon 21988311 21988859 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000607942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-003"; exon_number 3; exon_id "ENSE00001056711.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000472374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10658 chr22 HAVANA CDS 21988311 21988859 . + 0 gene_id "ENSG00000161180.6"; transcript_id "ENST00000607942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-003"; exon_number 3; exon_id "ENSE00001056711.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000472374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10659 chr22 HAVANA exon 21988974 21990091 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000607942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-003"; exon_number 4; exon_id "ENSE00003706586.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000472374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10660 chr22 HAVANA CDS 21988974 21989930 . + 0 gene_id "ENSG00000161180.6"; transcript_id "ENST00000607942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-003"; exon_number 4; exon_id "ENSE00003706586.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000472374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10661 chr22 HAVANA stop_codon 21989931 21989933 . + 0 gene_id "ENSG00000161180.6"; transcript_id "ENST00000607942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-003"; exon_number 4; exon_id "ENSE00003706586.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000472374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10662 chr22 HAVANA UTR 21987005 21987116 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000607942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-003"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000472374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10663 chr22 HAVANA UTR 21987409 21987470 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000607942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-003"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000472374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10664 chr22 HAVANA UTR 21989931 21990091 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000607942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-003"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000472374.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10665 chr22 HAVANA transcript 21987007 21988498 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000425975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-002"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10666 chr22 HAVANA exon 21987007 21987116 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000425975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-002"; exon_number 1; exon_id "ENSE00001707342.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10667 chr22 HAVANA exon 21987269 21987542 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000425975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-002"; exon_number 2; exon_id "ENSE00001746871.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10668 chr22 HAVANA CDS 21987273 21987542 . + 0 gene_id "ENSG00000161180.6"; transcript_id "ENST00000425975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-002"; exon_number 2; exon_id "ENSE00001746871.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10669 chr22 HAVANA start_codon 21987273 21987275 . + 0 gene_id "ENSG00000161180.6"; transcript_id "ENST00000425975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-002"; exon_number 2; exon_id "ENSE00001746871.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10670 chr22 HAVANA exon 21988311 21988498 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000425975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-002"; exon_number 3; exon_id "ENSE00001601844.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10671 chr22 HAVANA CDS 21988311 21988498 . + 0 gene_id "ENSG00000161180.6"; transcript_id "ENST00000425975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-002"; exon_number 3; exon_id "ENSE00001601844.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10672 chr22 HAVANA UTR 21987007 21987116 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000425975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-002"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10673 chr22 HAVANA UTR 21987269 21987272 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000425975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCDC116-002"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10674 chr22 HAVANA transcript 21987018 21991616 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10675 chr22 HAVANA exon 21987018 21987116 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; exon_number 1; exon_id "ENSE00001309084.2"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10676 chr22 HAVANA exon 21987409 21987542 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; exon_number 2; exon_id "ENSE00001136193.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10677 chr22 HAVANA CDS 21987471 21987542 . + 0 gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; exon_number 2; exon_id "ENSE00001136193.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10678 chr22 HAVANA start_codon 21987471 21987473 . + 0 gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; exon_number 2; exon_id "ENSE00001136193.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10679 chr22 HAVANA exon 21988311 21988859 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; exon_number 3; exon_id "ENSE00001056711.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10680 chr22 HAVANA CDS 21988311 21988859 . + 0 gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; exon_number 3; exon_id "ENSE00001056711.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10681 chr22 HAVANA exon 21988974 21989555 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; exon_number 4; exon_id "ENSE00001136182.2"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10682 chr22 HAVANA CDS 21988974 21989555 . + 0 gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; exon_number 4; exon_id "ENSE00001136182.2"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10683 chr22 HAVANA exon 21990721 21991616 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; exon_number 5; exon_id "ENSE00001261060.4"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10684 chr22 HAVANA CDS 21990721 21991356 . + 0 gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; exon_number 5; exon_id "ENSE00001261060.4"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10685 chr22 HAVANA stop_codon 21991357 21991359 . + 0 gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; exon_number 5; exon_id "ENSE00001261060.4"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10686 chr22 HAVANA UTR 21987018 21987116 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10687 chr22 HAVANA UTR 21987409 21987470 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10688 chr22 HAVANA UTR 21991357 21991616 . + . gene_id "ENSG00000161180.6"; transcript_id "ENST00000292779.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCDC116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCDC116-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13791.1"; havana_gene "OTTHUMG00000150821.2"; havana_transcript "OTTHUMT00000320199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10689 chr22 HAVANA gene 21995133 21995573 . + . gene_id "ENSG00000273342.1"; transcript_id "ENSG00000273342.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1440D3.14"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "KB-1440D3.14"; level 2; havana_gene "OTTHUMG00000186182.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10690 chr22 HAVANA transcript 21995133 21995573 . + . gene_id "ENSG00000273342.1"; transcript_id "ENST00000609038.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1440D3.14"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1440D3.14-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186182.1"; havana_transcript "OTTHUMT00000472375.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10691 chr22 HAVANA exon 21995133 21995573 . + . gene_id "ENSG00000273342.1"; transcript_id "ENST00000609038.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-1440D3.14"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-1440D3.14-001"; exon_number 1; exon_id "ENSE00003708220.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186182.1"; havana_transcript "OTTHUMT00000472375.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10692 chr22 HAVANA gene 21996550 21998587 . + . gene_id "ENSG00000128228.4"; transcript_id "ENSG00000128228.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SDF2L1"; level 2; havana_gene "OTTHUMG00000150820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10693 chr22 HAVANA transcript 21996550 21998587 . + . gene_id "ENSG00000128228.4"; transcript_id "ENST00000248958.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SDF2L1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13792.1"; havana_gene "OTTHUMG00000150820.1"; havana_transcript "OTTHUMT00000320197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10694 chr22 HAVANA exon 21996550 21996812 . + . gene_id "ENSG00000128228.4"; transcript_id "ENST00000248958.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SDF2L1-001"; exon_number 1; exon_id "ENSE00000879336.6"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13792.1"; havana_gene "OTTHUMG00000150820.1"; havana_transcript "OTTHUMT00000320197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10695 chr22 HAVANA CDS 21996626 21996812 . + 0 gene_id "ENSG00000128228.4"; transcript_id "ENST00000248958.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SDF2L1-001"; exon_number 1; exon_id "ENSE00000879336.6"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13792.1"; havana_gene "OTTHUMG00000150820.1"; havana_transcript "OTTHUMT00000320197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10696 chr22 HAVANA start_codon 21996626 21996628 . + 0 gene_id "ENSG00000128228.4"; transcript_id "ENST00000248958.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SDF2L1-001"; exon_number 1; exon_id "ENSE00000879336.6"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13792.1"; havana_gene "OTTHUMG00000150820.1"; havana_transcript "OTTHUMT00000320197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10697 chr22 HAVANA exon 21997151 21997347 . + . gene_id "ENSG00000128228.4"; transcript_id "ENST00000248958.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SDF2L1-001"; exon_number 2; exon_id "ENSE00000879337.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13792.1"; havana_gene "OTTHUMG00000150820.1"; havana_transcript "OTTHUMT00000320197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10698 chr22 HAVANA CDS 21997151 21997347 . + 2 gene_id "ENSG00000128228.4"; transcript_id "ENST00000248958.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SDF2L1-001"; exon_number 2; exon_id "ENSE00000879337.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13792.1"; havana_gene "OTTHUMG00000150820.1"; havana_transcript "OTTHUMT00000320197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10699 chr22 HAVANA exon 21998183 21998587 . + . gene_id "ENSG00000128228.4"; transcript_id "ENST00000248958.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SDF2L1-001"; exon_number 3; exon_id "ENSE00000879338.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13792.1"; havana_gene "OTTHUMG00000150820.1"; havana_transcript "OTTHUMT00000320197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10700 chr22 HAVANA CDS 21998183 21998461 . + 0 gene_id "ENSG00000128228.4"; transcript_id "ENST00000248958.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SDF2L1-001"; exon_number 3; exon_id "ENSE00000879338.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13792.1"; havana_gene "OTTHUMG00000150820.1"; havana_transcript "OTTHUMT00000320197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10701 chr22 HAVANA stop_codon 21998462 21998464 . + 0 gene_id "ENSG00000128228.4"; transcript_id "ENST00000248958.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SDF2L1-001"; exon_number 3; exon_id "ENSE00000879338.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13792.1"; havana_gene "OTTHUMG00000150820.1"; havana_transcript "OTTHUMT00000320197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10702 chr22 HAVANA UTR 21996550 21996625 . + . gene_id "ENSG00000128228.4"; transcript_id "ENST00000248958.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SDF2L1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13792.1"; havana_gene "OTTHUMG00000150820.1"; havana_transcript "OTTHUMT00000320197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10703 chr22 HAVANA UTR 21998462 21998587 . + . gene_id "ENSG00000128228.4"; transcript_id "ENST00000248958.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SDF2L1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13792.1"; havana_gene "OTTHUMG00000150820.1"; havana_transcript "OTTHUMT00000320197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10704 chr22 HAVANA transcript 21996643 21997581 . + . gene_id "ENSG00000128228.4"; transcript_id "ENST00000466935.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SDF2L1-002"; level 2; havana_gene "OTTHUMG00000150820.1"; havana_transcript "OTTHUMT00000320198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10705 chr22 HAVANA exon 21996643 21996812 . + . gene_id "ENSG00000128228.4"; transcript_id "ENST00000466935.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SDF2L1-002"; exon_number 1; exon_id "ENSE00001838660.1"; level 2; havana_gene "OTTHUMG00000150820.1"; havana_transcript "OTTHUMT00000320198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10706 chr22 HAVANA exon 21997151 21997581 . + . gene_id "ENSG00000128228.4"; transcript_id "ENST00000466935.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SDF2L1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SDF2L1-002"; exon_number 2; exon_id "ENSE00001851906.1"; level 2; havana_gene "OTTHUMG00000150820.1"; havana_transcript "OTTHUMT00000320198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10707 chr22 HAVANA gene 22006559 22054304 . + . gene_id "ENSG00000100023.13"; transcript_id "ENSG00000100023.13"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2"; level 2; tag "ncRNA_host"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10708 chr22 HAVANA transcript 22006559 22024526 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000498589.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-002"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000102312.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10709 chr22 HAVANA exon 22006559 22006620 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000498589.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-002"; exon_number 1; exon_id "ENSE00001954966.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000102312.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10710 chr22 HAVANA exon 22007631 22007755 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000498589.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-002"; exon_number 2; exon_id "ENSE00001915333.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000102312.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10711 chr22 HAVANA exon 22008302 22008456 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000498589.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-002"; exon_number 3; exon_id "ENSE00001952227.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000102312.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10712 chr22 HAVANA exon 22012555 22012751 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000498589.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-002"; exon_number 4; exon_id "ENSE00001926207.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000102312.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10713 chr22 HAVANA exon 22012932 22012975 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000498589.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-002"; exon_number 5; exon_id "ENSE00001931574.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000102312.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10714 chr22 HAVANA exon 22015126 22015310 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000498589.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-002"; exon_number 6; exon_id "ENSE00001847627.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000102312.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10715 chr22 HAVANA exon 22024202 22024526 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000498589.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-002"; exon_number 7; exon_id "ENSE00001863931.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000102312.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10716 chr22 ENSEMBL transcript 22020273 22052201 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10717 chr22 ENSEMBL exon 22020273 22020420 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 1; exon_id "ENSE00001535315.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10718 chr22 ENSEMBL CDS 22020389 22020420 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 1; exon_id "ENSE00001535315.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10719 chr22 ENSEMBL start_codon 22020389 22020391 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 1; exon_id "ENSE00001535315.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10720 chr22 ENSEMBL exon 22024202 22024251 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 2; exon_id "ENSE00003677859.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10721 chr22 ENSEMBL CDS 22024202 22024251 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 2; exon_id "ENSE00003677859.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10722 chr22 ENSEMBL exon 22024855 22024900 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 3; exon_id "ENSE00003469627.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10723 chr22 ENSEMBL CDS 22024855 22024900 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 3; exon_id "ENSE00003469627.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10724 chr22 ENSEMBL exon 22025286 22025348 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 4; exon_id "ENSE00003640331.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10725 chr22 ENSEMBL CDS 22025286 22025348 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 4; exon_id "ENSE00003640331.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10726 chr22 ENSEMBL exon 22026619 22026670 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 5; exon_id "ENSE00003601511.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10727 chr22 ENSEMBL CDS 22026619 22026670 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 5; exon_id "ENSE00003601511.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10728 chr22 ENSEMBL exon 22029353 22029404 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 6; exon_id "ENSE00003607932.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10729 chr22 ENSEMBL CDS 22029353 22029404 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 6; exon_id "ENSE00003607932.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10730 chr22 ENSEMBL exon 22035588 22035679 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 7; exon_id "ENSE00003639039.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10731 chr22 ENSEMBL CDS 22035588 22035679 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 7; exon_id "ENSE00003639039.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10732 chr22 ENSEMBL exon 22036726 22036815 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 8; exon_id "ENSE00003537909.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10733 chr22 ENSEMBL CDS 22036726 22036815 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 8; exon_id "ENSE00003537909.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10734 chr22 ENSEMBL exon 22037471 22037546 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 9; exon_id "ENSE00003625341.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10735 chr22 ENSEMBL CDS 22037471 22037546 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 9; exon_id "ENSE00003625341.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10736 chr22 ENSEMBL exon 22039042 22039202 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 10; exon_id "ENSE00003530147.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10737 chr22 ENSEMBL CDS 22039042 22039202 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 10; exon_id "ENSE00003530147.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10738 chr22 ENSEMBL exon 22040772 22040847 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 11; exon_id "ENSE00003711192.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10739 chr22 ENSEMBL CDS 22040772 22040847 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 11; exon_id "ENSE00003711192.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10740 chr22 ENSEMBL exon 22041181 22041287 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 12; exon_id "ENSE00003709824.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10741 chr22 ENSEMBL CDS 22041181 22041287 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 12; exon_id "ENSE00003709824.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10742 chr22 ENSEMBL exon 22041932 22042021 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 13; exon_id "ENSE00003710225.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10743 chr22 ENSEMBL CDS 22041932 22042021 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 13; exon_id "ENSE00003710225.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10744 chr22 ENSEMBL exon 22042362 22042395 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 14; exon_id "ENSE00003703317.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10745 chr22 ENSEMBL CDS 22042362 22042395 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 14; exon_id "ENSE00003703317.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10746 chr22 ENSEMBL exon 22043021 22043138 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 15; exon_id "ENSE00003706452.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10747 chr22 ENSEMBL CDS 22043021 22043138 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 15; exon_id "ENSE00003706452.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10748 chr22 ENSEMBL exon 22048105 22048161 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 16; exon_id "ENSE00003703679.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10749 chr22 ENSEMBL CDS 22048105 22048161 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 16; exon_id "ENSE00003703679.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10750 chr22 ENSEMBL exon 22048882 22048954 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 17; exon_id "ENSE00003710901.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10751 chr22 ENSEMBL CDS 22048882 22048954 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 17; exon_id "ENSE00003710901.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10752 chr22 ENSEMBL exon 22049044 22049106 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 18; exon_id "ENSE00003705363.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10753 chr22 ENSEMBL CDS 22049044 22049106 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 18; exon_id "ENSE00003705363.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10754 chr22 ENSEMBL exon 22049226 22049359 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 19; exon_id "ENSE00003707868.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10755 chr22 ENSEMBL CDS 22049226 22049359 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 19; exon_id "ENSE00003707868.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10756 chr22 ENSEMBL exon 22049687 22049785 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 20; exon_id "ENSE00001746901.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10757 chr22 ENSEMBL CDS 22049687 22049785 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 20; exon_id "ENSE00001746901.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10758 chr22 ENSEMBL exon 22051174 22052201 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 21; exon_id "ENSE00001649299.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10759 chr22 ENSEMBL CDS 22051174 22051189 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 21; exon_id "ENSE00001649299.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10760 chr22 ENSEMBL stop_codon 22051190 22051192 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; exon_number 21; exon_id "ENSE00001649299.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10761 chr22 ENSEMBL UTR 22020273 22020388 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10762 chr22 ENSEMBL UTR 22051190 22052201 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000412327.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS46670.1"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10763 chr22 HAVANA transcript 22020298 22024572 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000496819.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PPIL2-008"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320207.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10764 chr22 HAVANA exon 22020298 22020420 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000496819.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PPIL2-008"; exon_number 1; exon_id "ENSE00003572672.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320207.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10765 chr22 HAVANA exon 22024202 22024572 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000496819.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PPIL2-008"; exon_number 2; exon_id "ENSE00001878568.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320207.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10766 chr22 HAVANA transcript 22020298 22054304 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10767 chr22 HAVANA exon 22020298 22020420 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 1; exon_id "ENSE00003674025.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10768 chr22 HAVANA CDS 22020389 22020420 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 1; exon_id "ENSE00003674025.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10769 chr22 HAVANA start_codon 22020389 22020391 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 1; exon_id "ENSE00003674025.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10770 chr22 HAVANA exon 22024202 22024251 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 2; exon_id "ENSE00003677859.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10771 chr22 HAVANA CDS 22024202 22024251 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 2; exon_id "ENSE00003677859.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10772 chr22 HAVANA exon 22024855 22024900 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 3; exon_id "ENSE00003469627.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10773 chr22 HAVANA CDS 22024855 22024900 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 3; exon_id "ENSE00003469627.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10774 chr22 HAVANA exon 22025286 22025348 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 4; exon_id "ENSE00003640331.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10775 chr22 HAVANA CDS 22025286 22025348 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 4; exon_id "ENSE00003640331.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10776 chr22 HAVANA exon 22026619 22026670 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 5; exon_id "ENSE00003601511.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10777 chr22 HAVANA CDS 22026619 22026670 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 5; exon_id "ENSE00003601511.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10778 chr22 HAVANA exon 22029353 22029404 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 6; exon_id "ENSE00003607932.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10779 chr22 HAVANA CDS 22029353 22029404 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 6; exon_id "ENSE00003607932.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10780 chr22 HAVANA exon 22035588 22035679 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 7; exon_id "ENSE00003639039.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10781 chr22 HAVANA CDS 22035588 22035679 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 7; exon_id "ENSE00003639039.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10782 chr22 HAVANA exon 22036726 22036815 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 8; exon_id "ENSE00003537909.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10783 chr22 HAVANA CDS 22036726 22036815 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 8; exon_id "ENSE00003537909.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10784 chr22 HAVANA exon 22037471 22037546 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 9; exon_id "ENSE00003625341.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10785 chr22 HAVANA CDS 22037471 22037546 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 9; exon_id "ENSE00003625341.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10786 chr22 HAVANA exon 22039042 22039202 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 10; exon_id "ENSE00003530147.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10787 chr22 HAVANA CDS 22039042 22039202 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 10; exon_id "ENSE00003530147.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10788 chr22 HAVANA exon 22040772 22040847 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 11; exon_id "ENSE00003711192.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10789 chr22 HAVANA CDS 22040772 22040847 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 11; exon_id "ENSE00003711192.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10790 chr22 HAVANA exon 22041181 22041287 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 12; exon_id "ENSE00003709824.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10791 chr22 HAVANA CDS 22041181 22041287 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 12; exon_id "ENSE00003709824.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10792 chr22 HAVANA exon 22041932 22042021 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 13; exon_id "ENSE00003710225.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10793 chr22 HAVANA CDS 22041932 22042021 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 13; exon_id "ENSE00003710225.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10794 chr22 HAVANA exon 22042362 22042395 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 14; exon_id "ENSE00003703317.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10795 chr22 HAVANA CDS 22042362 22042395 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 14; exon_id "ENSE00003703317.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10796 chr22 HAVANA exon 22043021 22043138 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 15; exon_id "ENSE00003706452.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10797 chr22 HAVANA CDS 22043021 22043138 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 15; exon_id "ENSE00003706452.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10798 chr22 HAVANA exon 22048105 22048161 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 16; exon_id "ENSE00003703679.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10799 chr22 HAVANA CDS 22048105 22048161 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 16; exon_id "ENSE00003703679.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10800 chr22 HAVANA exon 22048882 22048954 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 17; exon_id "ENSE00003710901.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10801 chr22 HAVANA CDS 22048882 22048954 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 17; exon_id "ENSE00003710901.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10802 chr22 HAVANA exon 22049044 22049106 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 18; exon_id "ENSE00003705363.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10803 chr22 HAVANA CDS 22049044 22049106 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 18; exon_id "ENSE00003705363.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10804 chr22 HAVANA exon 22049226 22049359 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 19; exon_id "ENSE00003707868.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10805 chr22 HAVANA CDS 22049226 22049359 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 19; exon_id "ENSE00003707868.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10806 chr22 HAVANA exon 22049683 22049785 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 20; exon_id "ENSE00003708379.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10807 chr22 HAVANA CDS 22049683 22049776 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 20; exon_id "ENSE00003708379.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10808 chr22 HAVANA stop_codon 22049777 22049779 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 20; exon_id "ENSE00003708379.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10809 chr22 HAVANA exon 22051036 22054304 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; exon_number 21; exon_id "ENSE00001366342.6"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10810 chr22 HAVANA UTR 22020298 22020388 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10811 chr22 HAVANA UTR 22049777 22049785 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10812 chr22 HAVANA UTR 22051036 22054304 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000335025.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000075028.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10813 chr22 HAVANA transcript 22020311 22050712 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10814 chr22 HAVANA exon 22020311 22020420 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 1; exon_id "ENSE00001783855.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10815 chr22 HAVANA CDS 22020389 22020420 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 1; exon_id "ENSE00001783855.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10816 chr22 HAVANA start_codon 22020389 22020391 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 1; exon_id "ENSE00001783855.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10817 chr22 HAVANA exon 22024202 22024251 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 2; exon_id "ENSE00003677859.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10818 chr22 HAVANA CDS 22024202 22024251 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 2; exon_id "ENSE00003677859.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10819 chr22 HAVANA exon 22024855 22024900 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 3; exon_id "ENSE00003469627.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10820 chr22 HAVANA CDS 22024855 22024900 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 3; exon_id "ENSE00003469627.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10821 chr22 HAVANA exon 22025286 22025348 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 4; exon_id "ENSE00003640331.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10822 chr22 HAVANA CDS 22025286 22025348 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 4; exon_id "ENSE00003640331.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10823 chr22 HAVANA exon 22026619 22026670 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 5; exon_id "ENSE00003601511.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10824 chr22 HAVANA CDS 22026619 22026670 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 5; exon_id "ENSE00003601511.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10825 chr22 HAVANA exon 22029353 22029404 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 6; exon_id "ENSE00003607932.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10826 chr22 HAVANA CDS 22029353 22029404 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 6; exon_id "ENSE00003607932.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10827 chr22 HAVANA exon 22035588 22035679 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 7; exon_id "ENSE00003639039.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10828 chr22 HAVANA CDS 22035588 22035679 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 7; exon_id "ENSE00003639039.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10829 chr22 HAVANA exon 22036726 22036815 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 8; exon_id "ENSE00003537909.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10830 chr22 HAVANA CDS 22036726 22036815 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 8; exon_id "ENSE00003537909.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10831 chr22 HAVANA exon 22037471 22037546 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 9; exon_id "ENSE00003625341.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10832 chr22 HAVANA CDS 22037471 22037546 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 9; exon_id "ENSE00003625341.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10833 chr22 HAVANA exon 22039042 22039202 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 10; exon_id "ENSE00003530147.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10834 chr22 HAVANA CDS 22039042 22039202 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 10; exon_id "ENSE00003530147.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10835 chr22 HAVANA exon 22040772 22040847 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 11; exon_id "ENSE00003711192.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10836 chr22 HAVANA CDS 22040772 22040847 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 11; exon_id "ENSE00003711192.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10837 chr22 HAVANA exon 22041181 22041287 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 12; exon_id "ENSE00003709824.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10838 chr22 HAVANA CDS 22041181 22041287 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 12; exon_id "ENSE00003709824.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10839 chr22 HAVANA exon 22041932 22042021 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 13; exon_id "ENSE00003710225.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10840 chr22 HAVANA CDS 22041932 22042021 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 13; exon_id "ENSE00003710225.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10841 chr22 HAVANA exon 22042362 22042395 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 14; exon_id "ENSE00003703317.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10842 chr22 HAVANA CDS 22042362 22042395 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 14; exon_id "ENSE00003703317.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10843 chr22 HAVANA exon 22043021 22043138 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 15; exon_id "ENSE00003706452.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10844 chr22 HAVANA CDS 22043021 22043138 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 15; exon_id "ENSE00003706452.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10845 chr22 HAVANA exon 22048105 22048161 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 16; exon_id "ENSE00003703679.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10846 chr22 HAVANA CDS 22048105 22048161 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 16; exon_id "ENSE00003703679.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10847 chr22 HAVANA exon 22048882 22048954 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 17; exon_id "ENSE00003710901.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10848 chr22 HAVANA CDS 22048882 22048954 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 17; exon_id "ENSE00003710901.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10849 chr22 HAVANA exon 22049044 22049106 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 18; exon_id "ENSE00003705363.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10850 chr22 HAVANA CDS 22049044 22049106 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 18; exon_id "ENSE00003705363.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10851 chr22 HAVANA exon 22049226 22049359 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 19; exon_id "ENSE00003707868.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10852 chr22 HAVANA CDS 22049226 22049359 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 19; exon_id "ENSE00003707868.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10853 chr22 HAVANA exon 22049683 22050712 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 20; exon_id "ENSE00001651605.2"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10854 chr22 HAVANA CDS 22049683 22049776 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 20; exon_id "ENSE00001651605.2"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
10855 chr22 HAVANA stop_codon 22049777 22049779 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; exon_number 20; exon_id "ENSE00001651605.2"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10856 chr22 HAVANA UTR 22020311 22020388 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10857 chr22 HAVANA UTR 22049777 22050712 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000398831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-006"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320205.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
10858 chr22 HAVANA transcript 22020311 22050349 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10859 chr22 HAVANA exon 22020311 22020420 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 1; exon_id "ENSE00001783855.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
10860 chr22 HAVANA CDS 22020389 22020420 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 1; exon_id "ENSE00001783855.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10861 chr22 HAVANA start_codon 22020389 22020391 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 1; exon_id "ENSE00001783855.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10862 chr22 HAVANA exon 22024202 22024251 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 2; exon_id "ENSE00003677859.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10863 chr22 HAVANA CDS 22024202 22024251 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 2; exon_id "ENSE00003677859.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10864 chr22 HAVANA exon 22024855 22024900 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 3; exon_id "ENSE00003469627.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10865 chr22 HAVANA CDS 22024855 22024900 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 3; exon_id "ENSE00003469627.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10866 chr22 HAVANA exon 22025286 22025348 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 4; exon_id "ENSE00003640331.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10867 chr22 HAVANA CDS 22025286 22025348 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 4; exon_id "ENSE00003640331.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10868 chr22 HAVANA exon 22026619 22026670 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 5; exon_id "ENSE00003601511.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10869 chr22 HAVANA CDS 22026619 22026670 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 5; exon_id "ENSE00003601511.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10870 chr22 HAVANA exon 22029353 22029404 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 6; exon_id "ENSE00003607932.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10871 chr22 HAVANA CDS 22029353 22029404 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 6; exon_id "ENSE00003607932.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10872 chr22 HAVANA exon 22035588 22035679 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 7; exon_id "ENSE00003639039.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10873 chr22 HAVANA CDS 22035588 22035679 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 7; exon_id "ENSE00003639039.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10874 chr22 HAVANA exon 22036726 22036815 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 8; exon_id "ENSE00003537909.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10875 chr22 HAVANA CDS 22036726 22036815 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 8; exon_id "ENSE00003537909.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10876 chr22 HAVANA exon 22037471 22037546 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 9; exon_id "ENSE00003625341.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10877 chr22 HAVANA CDS 22037471 22037546 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 9; exon_id "ENSE00003625341.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10878 chr22 HAVANA exon 22039042 22039202 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 10; exon_id "ENSE00003530147.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10879 chr22 HAVANA CDS 22039042 22039202 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 10; exon_id "ENSE00003530147.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10880 chr22 HAVANA exon 22040772 22040847 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 11; exon_id "ENSE00003711192.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10881 chr22 HAVANA CDS 22040772 22040847 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 11; exon_id "ENSE00003711192.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10882 chr22 HAVANA exon 22041181 22041287 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 12; exon_id "ENSE00003709824.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10883 chr22 HAVANA CDS 22041181 22041287 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 12; exon_id "ENSE00003709824.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10884 chr22 HAVANA exon 22041932 22042021 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 13; exon_id "ENSE00003710225.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10885 chr22 HAVANA CDS 22041932 22042021 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 13; exon_id "ENSE00003710225.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10886 chr22 HAVANA exon 22042362 22042395 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 14; exon_id "ENSE00003703317.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10887 chr22 HAVANA CDS 22042362 22042395 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 14; exon_id "ENSE00003703317.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10888 chr22 HAVANA exon 22043021 22043138 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 15; exon_id "ENSE00003706452.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10889 chr22 HAVANA CDS 22043021 22043138 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 15; exon_id "ENSE00003706452.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10890 chr22 HAVANA exon 22048105 22048161 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 16; exon_id "ENSE00003703679.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10891 chr22 HAVANA CDS 22048105 22048161 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 16; exon_id "ENSE00003703679.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10892 chr22 HAVANA exon 22048882 22048954 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 17; exon_id "ENSE00003710901.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10893 chr22 HAVANA CDS 22048882 22048954 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 17; exon_id "ENSE00003710901.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10894 chr22 HAVANA exon 22049044 22049106 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 18; exon_id "ENSE00003705363.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10895 chr22 HAVANA CDS 22049044 22049106 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 18; exon_id "ENSE00003705363.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10896 chr22 HAVANA exon 22049226 22049359 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 19; exon_id "ENSE00003707868.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10897 chr22 HAVANA CDS 22049226 22049359 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 19; exon_id "ENSE00003707868.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10898 chr22 HAVANA exon 22049683 22049785 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 20; exon_id "ENSE00003708379.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10899 chr22 HAVANA CDS 22049683 22049776 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 20; exon_id "ENSE00003708379.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10900 chr22 HAVANA stop_codon 22049777 22049779 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 20; exon_id "ENSE00003708379.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10901 chr22 HAVANA exon 22050156 22050349 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; exon_number 21; exon_id "ENSE00002209262.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10902 chr22 HAVANA UTR 22020311 22020388 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10903 chr22 HAVANA UTR 22049777 22049785 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10904 chr22 HAVANA UTR 22050156 22050349 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000492445.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-203"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10905 chr22 HAVANA transcript 22020312 22035679 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10906 chr22 HAVANA exon 22020312 22020420 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 1; exon_id "ENSE00001734841.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10907 chr22 HAVANA CDS 22020389 22020420 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 1; exon_id "ENSE00001734841.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10908 chr22 HAVANA start_codon 22020389 22020391 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 1; exon_id "ENSE00001734841.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10909 chr22 HAVANA exon 22023623 22023715 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 2; exon_id "ENSE00001530227.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10910 chr22 HAVANA CDS 22023623 22023715 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 2; exon_id "ENSE00001530227.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10911 chr22 HAVANA exon 22024202 22024251 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 3; exon_id "ENSE00003677859.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10912 chr22 HAVANA CDS 22024202 22024251 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 3; exon_id "ENSE00003677859.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10913 chr22 HAVANA exon 22024855 22024900 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 4; exon_id "ENSE00003469627.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10914 chr22 HAVANA CDS 22024855 22024900 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 4; exon_id "ENSE00003469627.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10915 chr22 HAVANA exon 22025286 22025348 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 5; exon_id "ENSE00003640331.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10916 chr22 HAVANA CDS 22025286 22025348 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 5; exon_id "ENSE00003640331.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10917 chr22 HAVANA exon 22026619 22026670 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 6; exon_id "ENSE00003601511.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10918 chr22 HAVANA CDS 22026619 22026670 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 6; exon_id "ENSE00003601511.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10919 chr22 HAVANA exon 22029353 22029404 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 7; exon_id "ENSE00003607932.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10920 chr22 HAVANA CDS 22029353 22029404 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 7; exon_id "ENSE00003607932.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10921 chr22 HAVANA exon 22035588 22035679 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 8; exon_id "ENSE00003531919.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10922 chr22 HAVANA CDS 22035588 22035679 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; exon_number 8; exon_id "ENSE00003531919.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10923 chr22 HAVANA UTR 22020312 22020388 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000458567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPIL2-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320208.12";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10924 chr22 HAVANA transcript 22020312 22052201 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10925 chr22 HAVANA exon 22020312 22020420 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 1; exon_id "ENSE00001734841.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10926 chr22 HAVANA CDS 22020389 22020420 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 1; exon_id "ENSE00001734841.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10927 chr22 HAVANA start_codon 22020389 22020391 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 1; exon_id "ENSE00001734841.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10928 chr22 HAVANA exon 22024202 22024251 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 2; exon_id "ENSE00003677859.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10929 chr22 HAVANA CDS 22024202 22024251 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 2; exon_id "ENSE00003677859.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10930 chr22 HAVANA exon 22024588 22024649 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 3; exon_id "ENSE00001597232.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10931 chr22 HAVANA CDS 22024588 22024628 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 3; exon_id "ENSE00001597232.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10932 chr22 HAVANA stop_codon 22024629 22024631 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 3; exon_id "ENSE00001597232.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10933 chr22 HAVANA exon 22024855 22024900 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 4; exon_id "ENSE00003477089.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10934 chr22 HAVANA exon 22025286 22025348 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 5; exon_id "ENSE00003560409.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10935 chr22 HAVANA exon 22026619 22026670 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 6; exon_id "ENSE00003481222.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10936 chr22 HAVANA exon 22029353 22029404 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 7; exon_id "ENSE00003507825.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10937 chr22 HAVANA exon 22035588 22035679 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 8; exon_id "ENSE00003649369.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10938 chr22 HAVANA exon 22036726 22036815 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 9; exon_id "ENSE00003617527.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10939 chr22 HAVANA exon 22037471 22037546 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 10; exon_id "ENSE00003639677.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10940 chr22 HAVANA exon 22039042 22039202 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 11; exon_id "ENSE00003481449.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10941 chr22 HAVANA exon 22039927 22040015 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 12; exon_id "ENSE00001739089.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10942 chr22 HAVANA exon 22040772 22040847 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 13; exon_id "ENSE00003703403.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10943 chr22 HAVANA exon 22041181 22041287 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 14; exon_id "ENSE00003711254.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10944 chr22 HAVANA exon 22041932 22042021 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 15; exon_id "ENSE00003702706.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10945 chr22 HAVANA exon 22042362 22042395 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 16; exon_id "ENSE00003702652.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10946 chr22 HAVANA exon 22043021 22043138 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 17; exon_id "ENSE00003707346.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10947 chr22 HAVANA exon 22048105 22048161 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 18; exon_id "ENSE00003704149.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10948 chr22 HAVANA exon 22048882 22048954 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 19; exon_id "ENSE00003707824.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10949 chr22 HAVANA exon 22049044 22049106 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 20; exon_id "ENSE00003707906.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10950 chr22 HAVANA exon 22049226 22049359 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 21; exon_id "ENSE00003704247.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10951 chr22 HAVANA exon 22049683 22052201 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; exon_number 22; exon_id "ENSE00001680695.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10952 chr22 HAVANA UTR 22020312 22020388 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10953 chr22 HAVANA UTR 22024629 22024649 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10954 chr22 HAVANA UTR 22024855 22024900 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10955 chr22 HAVANA UTR 22025286 22025348 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10956 chr22 HAVANA UTR 22026619 22026670 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10957 chr22 HAVANA UTR 22029353 22029404 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10958 chr22 HAVANA UTR 22035588 22035679 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10959 chr22 HAVANA UTR 22036726 22036815 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10960 chr22 HAVANA UTR 22037471 22037546 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10961 chr22 HAVANA UTR 22039042 22039202 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10962 chr22 HAVANA UTR 22039927 22040015 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10963 chr22 HAVANA UTR 22040772 22040847 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10964 chr22 HAVANA UTR 22041181 22041287 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10965 chr22 HAVANA UTR 22041932 22042021 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10966 chr22 HAVANA UTR 22042362 22042395 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10967 chr22 HAVANA UTR 22043021 22043138 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10968 chr22 HAVANA UTR 22048105 22048161 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10969 chr22 HAVANA UTR 22048882 22048954 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10970 chr22 HAVANA UTR 22049044 22049106 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10971 chr22 HAVANA UTR 22049226 22049359 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10972 chr22 HAVANA UTR 22049683 22052201 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000417788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PPIL2-003"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10973 chr22 HAVANA transcript 22020318 22039167 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000484439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-010"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10974 chr22 HAVANA exon 22020318 22020420 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000484439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-010"; exon_number 1; exon_id "ENSE00001868591.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10975 chr22 HAVANA exon 22024202 22024251 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000484439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-010"; exon_number 2; exon_id "ENSE00003670416.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10976 chr22 HAVANA exon 22024553 22024665 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000484439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-010"; exon_number 3; exon_id "ENSE00001820227.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10977 chr22 HAVANA exon 22024855 22024900 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000484439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-010"; exon_number 4; exon_id "ENSE00003477089.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10978 chr22 HAVANA exon 22025286 22025348 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000484439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-010"; exon_number 5; exon_id "ENSE00003560409.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10979 chr22 HAVANA exon 22026619 22026670 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000484439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-010"; exon_number 6; exon_id "ENSE00003481222.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10980 chr22 HAVANA exon 22029353 22029404 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000484439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-010"; exon_number 7; exon_id "ENSE00003507825.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10981 chr22 HAVANA exon 22035588 22035679 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000484439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-010"; exon_number 8; exon_id "ENSE00003649369.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10982 chr22 HAVANA exon 22036726 22036815 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000484439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-010"; exon_number 9; exon_id "ENSE00003617527.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10983 chr22 HAVANA exon 22037471 22037546 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000484439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-010"; exon_number 10; exon_id "ENSE00003639677.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10984 chr22 HAVANA exon 22039042 22039167 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000484439.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-010"; exon_number 11; exon_id "ENSE00001886360.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10985 chr22 HAVANA transcript 22020329 22052565 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10986 chr22 HAVANA exon 22020329 22020420 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 1; exon_id "ENSE00001136131.6"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10987 chr22 HAVANA CDS 22020389 22020420 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 1; exon_id "ENSE00001136131.6"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10988 chr22 HAVANA start_codon 22020389 22020391 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 1; exon_id "ENSE00001136131.6"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10989 chr22 HAVANA exon 22024202 22024251 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 2; exon_id "ENSE00003677859.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10990 chr22 HAVANA CDS 22024202 22024251 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 2; exon_id "ENSE00003677859.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10991 chr22 HAVANA exon 22024855 22024900 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 3; exon_id "ENSE00003469627.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10992 chr22 HAVANA CDS 22024855 22024900 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 3; exon_id "ENSE00003469627.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10993 chr22 HAVANA exon 22025286 22025348 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 4; exon_id "ENSE00003640331.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10994 chr22 HAVANA CDS 22025286 22025348 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 4; exon_id "ENSE00003640331.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10995 chr22 HAVANA exon 22026619 22026670 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 5; exon_id "ENSE00003601511.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10996 chr22 HAVANA CDS 22026619 22026670 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 5; exon_id "ENSE00003601511.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10997 chr22 HAVANA exon 22029353 22029404 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 6; exon_id "ENSE00003607932.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10998 chr22 HAVANA CDS 22029353 22029404 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 6; exon_id "ENSE00003607932.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
10999 chr22 HAVANA exon 22035588 22035679 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 7; exon_id "ENSE00003639039.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11000 chr22 HAVANA CDS 22035588 22035679 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 7; exon_id "ENSE00003639039.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11001 chr22 HAVANA exon 22036726 22036815 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 8; exon_id "ENSE00003537909.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11002 chr22 HAVANA CDS 22036726 22036815 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 8; exon_id "ENSE00003537909.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11003 chr22 HAVANA exon 22037471 22037546 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 9; exon_id "ENSE00003625341.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11004 chr22 HAVANA CDS 22037471 22037546 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 9; exon_id "ENSE00003625341.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11005 chr22 HAVANA exon 22039042 22039202 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 10; exon_id "ENSE00003530147.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11006 chr22 HAVANA CDS 22039042 22039202 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 10; exon_id "ENSE00003530147.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11007 chr22 HAVANA exon 22040772 22040847 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 11; exon_id "ENSE00003711192.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11008 chr22 HAVANA CDS 22040772 22040847 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 11; exon_id "ENSE00003711192.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11009 chr22 HAVANA exon 22041181 22041287 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 12; exon_id "ENSE00003709824.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11010 chr22 HAVANA CDS 22041181 22041287 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 12; exon_id "ENSE00003709824.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11011 chr22 HAVANA exon 22041932 22042021 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 13; exon_id "ENSE00003710225.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11012 chr22 HAVANA CDS 22041932 22042021 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 13; exon_id "ENSE00003710225.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11013 chr22 HAVANA exon 22042362 22042395 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 14; exon_id "ENSE00003703317.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11014 chr22 HAVANA CDS 22042362 22042395 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 14; exon_id "ENSE00003703317.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11015 chr22 HAVANA exon 22043021 22043138 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 15; exon_id "ENSE00003706452.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11016 chr22 HAVANA CDS 22043021 22043138 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 15; exon_id "ENSE00003706452.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11017 chr22 HAVANA exon 22048105 22048161 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 16; exon_id "ENSE00003703679.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11018 chr22 HAVANA CDS 22048105 22048161 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 16; exon_id "ENSE00003703679.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11019 chr22 HAVANA exon 22048882 22048954 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 17; exon_id "ENSE00003710901.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11020 chr22 HAVANA CDS 22048882 22048954 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 17; exon_id "ENSE00003710901.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11021 chr22 HAVANA exon 22049044 22049106 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 18; exon_id "ENSE00003705363.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11022 chr22 HAVANA CDS 22049044 22049106 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 18; exon_id "ENSE00003705363.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11023 chr22 HAVANA exon 22049226 22049359 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 19; exon_id "ENSE00003707868.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11024 chr22 HAVANA CDS 22049226 22049359 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 19; exon_id "ENSE00003707868.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11025 chr22 HAVANA exon 22049683 22049785 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 20; exon_id "ENSE00003708379.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11026 chr22 HAVANA CDS 22049683 22049776 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 20; exon_id "ENSE00003708379.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
11027 chr22 HAVANA stop_codon 22049777 22049779 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 20; exon_id "ENSE00003708379.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11028 chr22 HAVANA exon 22050320 22052565 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; exon_number 21; exon_id "ENSE00001550137.1"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11029 chr22 HAVANA UTR 22020329 22020388 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11030 chr22 HAVANA UTR 22049777 22049785 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11031 chr22 HAVANA UTR 22050320 22052565 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000406385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-005"; level 2; tag "alternative_3_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13793.1"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320204.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11032 chr22 ENSEMBL transcript 22020358 22051472 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11033 chr22 ENSEMBL exon 22020358 22020420 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 1; exon_id "ENSE00002248452.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11034 chr22 ENSEMBL CDS 22020389 22020420 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 1; exon_id "ENSE00002248452.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11035 chr22 ENSEMBL start_codon 22020389 22020391 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 1; exon_id "ENSE00002248452.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11036 chr22 ENSEMBL exon 22024202 22024251 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 2; exon_id "ENSE00003677859.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11037 chr22 ENSEMBL CDS 22024202 22024251 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 2; exon_id "ENSE00003677859.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11038 chr22 ENSEMBL exon 22024855 22024900 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 3; exon_id "ENSE00003469627.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11039 chr22 ENSEMBL CDS 22024855 22024900 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 3; exon_id "ENSE00003469627.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11040 chr22 ENSEMBL exon 22026619 22026670 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 4; exon_id "ENSE00003601511.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11041 chr22 ENSEMBL CDS 22026619 22026670 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 4; exon_id "ENSE00003601511.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11042 chr22 ENSEMBL exon 22029353 22029404 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 5; exon_id "ENSE00003607932.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11043 chr22 ENSEMBL CDS 22029353 22029404 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 5; exon_id "ENSE00003607932.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11044 chr22 ENSEMBL exon 22035588 22035679 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 6; exon_id "ENSE00003639039.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11045 chr22 ENSEMBL CDS 22035588 22035679 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 6; exon_id "ENSE00003639039.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11046 chr22 ENSEMBL exon 22036726 22036815 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 7; exon_id "ENSE00003537909.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11047 chr22 ENSEMBL CDS 22036726 22036815 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 7; exon_id "ENSE00003537909.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11048 chr22 ENSEMBL exon 22037471 22037546 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 8; exon_id "ENSE00003625341.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11049 chr22 ENSEMBL CDS 22037471 22037546 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 8; exon_id "ENSE00003625341.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11050 chr22 ENSEMBL exon 22039042 22039202 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 9; exon_id "ENSE00003530147.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11051 chr22 ENSEMBL CDS 22039042 22039202 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 9; exon_id "ENSE00003530147.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11052 chr22 ENSEMBL exon 22040772 22040847 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 10; exon_id "ENSE00003711192.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11053 chr22 ENSEMBL CDS 22040772 22040847 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 10; exon_id "ENSE00003711192.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11054 chr22 ENSEMBL exon 22041181 22041287 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 11; exon_id "ENSE00003709824.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11055 chr22 ENSEMBL CDS 22041181 22041287 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 11; exon_id "ENSE00003709824.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11056 chr22 ENSEMBL exon 22041932 22042021 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 12; exon_id "ENSE00003710225.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11057 chr22 ENSEMBL CDS 22041932 22042021 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 12; exon_id "ENSE00003710225.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11058 chr22 ENSEMBL exon 22042362 22042395 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 13; exon_id "ENSE00003703317.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11059 chr22 ENSEMBL CDS 22042362 22042395 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 13; exon_id "ENSE00003703317.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11060 chr22 ENSEMBL exon 22043021 22043138 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 14; exon_id "ENSE00003706452.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11061 chr22 ENSEMBL CDS 22043021 22043138 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 14; exon_id "ENSE00003706452.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11062 chr22 ENSEMBL exon 22048105 22048161 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 15; exon_id "ENSE00003703679.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11063 chr22 ENSEMBL CDS 22048105 22048161 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 15; exon_id "ENSE00003703679.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11064 chr22 ENSEMBL exon 22048882 22048954 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 16; exon_id "ENSE00003710901.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11065 chr22 ENSEMBL CDS 22048882 22048954 . + 1 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 16; exon_id "ENSE00003710901.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11066 chr22 ENSEMBL exon 22049044 22049106 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 17; exon_id "ENSE00003705363.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11067 chr22 ENSEMBL CDS 22049044 22049106 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 17; exon_id "ENSE00003705363.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11068 chr22 ENSEMBL exon 22049226 22049255 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 18; exon_id "ENSE00001762802.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11069 chr22 ENSEMBL CDS 22049226 22049255 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 18; exon_id "ENSE00001762802.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11070 chr22 ENSEMBL exon 22049683 22049785 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 19; exon_id "ENSE00003604152.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11071 chr22 ENSEMBL CDS 22049683 22049785 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 19; exon_id "ENSE00003604152.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11072 chr22 ENSEMBL exon 22051036 22051472 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 20; exon_id "ENSE00001697020.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11073 chr22 ENSEMBL CDS 22051036 22051100 . + 2 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 20; exon_id "ENSE00001697020.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11074 chr22 ENSEMBL stop_codon 22051101 22051103 . + 0 gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; exon_number 20; exon_id "ENSE00001697020.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11075 chr22 ENSEMBL UTR 22020358 22020388 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11076 chr22 ENSEMBL UTR 22051101 22051472 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000456792.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPIL2-202"; level 3; tag "basic"; havana_gene "OTTHUMG00000030174.15";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11077 chr22 HAVANA transcript 22020368 22025314 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000498109.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PPIL2-011"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320210.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11078 chr22 HAVANA exon 22020368 22020420 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000498109.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PPIL2-011"; exon_number 1; exon_id "ENSE00001902559.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320210.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11079 chr22 HAVANA exon 22024202 22024251 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000498109.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PPIL2-011"; exon_number 2; exon_id "ENSE00003670416.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320210.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11080 chr22 HAVANA exon 22024855 22025314 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000498109.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PPIL2-011"; exon_number 3; exon_id "ENSE00001949517.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320210.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11081 chr22 HAVANA transcript 22026619 22027898 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000485930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-012"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320211.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11082 chr22 HAVANA exon 22026619 22026670 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000485930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-012"; exon_number 1; exon_id "ENSE00003481222.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320211.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11083 chr22 HAVANA exon 22027802 22027898 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000485930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-012"; exon_number 2; exon_id "ENSE00001893504.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320211.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11084 chr22 HAVANA transcript 22039962 22052190 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000446951.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320203.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11085 chr22 HAVANA exon 22039962 22040015 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000446951.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-004"; exon_number 1; exon_id "ENSE00001767710.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320203.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11086 chr22 HAVANA exon 22040772 22040847 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000446951.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-004"; exon_number 2; exon_id "ENSE00003703403.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320203.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11087 chr22 HAVANA exon 22041181 22041287 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000446951.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-004"; exon_number 3; exon_id "ENSE00003711254.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320203.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11088 chr22 HAVANA exon 22041932 22042021 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000446951.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-004"; exon_number 4; exon_id "ENSE00003702706.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320203.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11089 chr22 HAVANA exon 22042362 22042395 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000446951.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-004"; exon_number 5; exon_id "ENSE00003702652.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320203.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11090 chr22 HAVANA exon 22043021 22043138 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000446951.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-004"; exon_number 6; exon_id "ENSE00003707346.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320203.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11091 chr22 HAVANA exon 22048105 22048161 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000446951.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-004"; exon_number 7; exon_id "ENSE00003704149.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320203.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11092 chr22 HAVANA exon 22048882 22048954 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000446951.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-004"; exon_number 8; exon_id "ENSE00003707824.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320203.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11093 chr22 HAVANA exon 22049044 22049106 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000446951.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-004"; exon_number 9; exon_id "ENSE00003707906.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320203.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11094 chr22 HAVANA exon 22049226 22049359 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000446951.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-004"; exon_number 10; exon_id "ENSE00003704247.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320203.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11095 chr22 HAVANA exon 22049683 22049785 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000446951.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-004"; exon_number 11; exon_id "ENSE00003708100.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320203.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11096 chr22 HAVANA exon 22051174 22052190 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000446951.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPIL2-004"; exon_number 12; exon_id "ENSE00001625735.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320203.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11097 chr22 HAVANA transcript 22048950 22052191 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000462188.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PPIL2-007"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320206.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11098 chr22 HAVANA exon 22048950 22049106 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000462188.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PPIL2-007"; exon_number 1; exon_id "ENSE00001827253.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320206.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11099 chr22 HAVANA exon 22049226 22049785 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000462188.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PPIL2-007"; exon_number 2; exon_id "ENSE00001874117.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320206.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11100 chr22 HAVANA exon 22051174 22052191 . + . gene_id "ENSG00000100023.13"; transcript_id "ENST00000462188.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPIL2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PPIL2-007"; exon_number 3; exon_id "ENSE00001845410.1"; level 2; havana_gene "OTTHUMG00000030174.15"; havana_transcript "OTTHUMT00000320206.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11101 chr22 ENSEMBL gene 22007270 22007347 . + . gene_id "ENSG00000212102.1"; transcript_id "ENSG00000212102.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR301B"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR301B"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11102 chr22 ENSEMBL transcript 22007270 22007347 . + . gene_id "ENSG00000212102.1"; transcript_id "ENST00000390813.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR301B"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR301B-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11103 chr22 ENSEMBL exon 22007270 22007347 . + . gene_id "ENSG00000212102.1"; transcript_id "ENST00000390813.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR301B"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR301B-201"; exon_number 1; exon_id "ENSE00001508490.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11104 chr22 ENSEMBL gene 22007593 22007674 . + . gene_id "ENSG00000207751.1"; transcript_id "ENSG00000207751.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR130B"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR130B"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11105 chr22 ENSEMBL transcript 22007593 22007674 . + . gene_id "ENSG00000207751.1"; transcript_id "ENST00000385018.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR130B"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR130B-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11106 chr22 ENSEMBL exon 22007593 22007674 . + . gene_id "ENSG00000207751.1"; transcript_id "ENST00000385018.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR130B"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR130B-201"; exon_number 1; exon_id "ENSE00001500025.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11107 chr22 HAVANA gene 22016223 22016652 . + . gene_id "ENSG00000272954.1"; transcript_id "ENSG00000272954.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "KB-1440D3.13"; transcript_type "sense_intronic"; transcript_status "NOVEL"; transcript_name "KB-1440D3.13"; level 2; havana_gene "OTTHUMG00000186183.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11108 chr22 HAVANA transcript 22016223 22016652 . + . gene_id "ENSG00000272954.1"; transcript_id "ENST00000610143.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "KB-1440D3.13"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "KB-1440D3.13-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186183.1"; havana_transcript "OTTHUMT00000472376.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11109 chr22 HAVANA exon 22016223 22016652 . + . gene_id "ENSG00000272954.1"; transcript_id "ENST00000610143.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "KB-1440D3.13"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "KB-1440D3.13-001"; exon_number 1; exon_id "ENSE00003704385.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186183.1"; havana_transcript "OTTHUMT00000472376.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11110 chr22 HAVANA gene 22051833 22090123 . - . gene_id "ENSG00000100027.10"; transcript_id "ENSG00000100027.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1"; level 2; tag "ncRNA_host"; havana_gene "OTTHUMG00000150830.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11111 chr22 HAVANA transcript 22051833 22090123 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11112 chr22 HAVANA exon 22089904 22090123 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; exon_number 1; exon_id "ENSE00001892965.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11113 chr22 HAVANA exon 22064917 22065197 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; exon_number 2; exon_id "ENSE00001364652.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11114 chr22 HAVANA CDS 22064917 22065033 . - 0 gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; exon_number 2; exon_id "ENSE00001364652.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11115 chr22 HAVANA start_codon 22065031 22065033 . - 0 gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; exon_number 2; exon_id "ENSE00001364652.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11116 chr22 HAVANA exon 22058128 22058171 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; exon_number 3; exon_id "ENSE00001734685.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11117 chr22 HAVANA CDS 22058128 22058171 . - 0 gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; exon_number 3; exon_id "ENSE00001734685.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11118 chr22 HAVANA exon 22057659 22057767 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; exon_number 4; exon_id "ENSE00003613170.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11119 chr22 HAVANA CDS 22057659 22057767 . - 1 gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; exon_number 4; exon_id "ENSE00003613170.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11120 chr22 HAVANA exon 22051833 22055507 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; exon_number 5; exon_id "ENSE00001368304.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11121 chr22 HAVANA CDS 22055421 22055507 . - 0 gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; exon_number 5; exon_id "ENSE00001368304.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11122 chr22 HAVANA stop_codon 22055418 22055420 . - 0 gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; exon_number 5; exon_id "ENSE00001368304.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11123 chr22 HAVANA UTR 22089904 22090123 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11124 chr22 HAVANA UTR 22065034 22065197 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11125 chr22 HAVANA UTR 22051833 22055420 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000339468.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YPEL1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13794.1"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11126 chr22 HAVANA transcript 22055154 22090050 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000477675.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YPEL1-002"; level 2; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11127 chr22 HAVANA exon 22089904 22090050 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000477675.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YPEL1-002"; exon_number 1; exon_id "ENSE00001422484.2"; level 2; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11128 chr22 HAVANA exon 22064776 22065197 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000477675.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YPEL1-002"; exon_number 2; exon_id "ENSE00001835895.1"; level 2; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11129 chr22 HAVANA exon 22058128 22058414 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000477675.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YPEL1-002"; exon_number 3; exon_id "ENSE00001952459.1"; level 2; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11130 chr22 HAVANA exon 22057659 22057767 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000477675.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YPEL1-002"; exon_number 4; exon_id "ENSE00003668252.1"; level 2; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11131 chr22 HAVANA exon 22055154 22055507 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000477675.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YPEL1-002"; exon_number 5; exon_id "ENSE00001838845.1"; level 2; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11132 chr22 HAVANA transcript 22058371 22090044 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000403503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "YPEL1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11133 chr22 HAVANA exon 22089904 22090044 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000403503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "YPEL1-003"; exon_number 1; exon_id "ENSE00001547104.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11134 chr22 HAVANA exon 22064917 22065197 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000403503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "YPEL1-003"; exon_number 2; exon_id "ENSE00001364652.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11135 chr22 HAVANA CDS 22064917 22065033 . - 0 gene_id "ENSG00000100027.10"; transcript_id "ENST00000403503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "YPEL1-003"; exon_number 2; exon_id "ENSE00001364652.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11136 chr22 HAVANA start_codon 22065031 22065033 . - 0 gene_id "ENSG00000100027.10"; transcript_id "ENST00000403503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "YPEL1-003"; exon_number 2; exon_id "ENSE00001364652.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11137 chr22 HAVANA exon 22058371 22058414 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000403503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "YPEL1-003"; exon_number 3; exon_id "ENSE00001560218.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11138 chr22 HAVANA CDS 22058400 22058414 . - 0 gene_id "ENSG00000100027.10"; transcript_id "ENST00000403503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "YPEL1-003"; exon_number 3; exon_id "ENSE00001560218.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11139 chr22 HAVANA stop_codon 22058397 22058399 . - 0 gene_id "ENSG00000100027.10"; transcript_id "ENST00000403503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "YPEL1-003"; exon_number 3; exon_id "ENSE00001560218.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11140 chr22 HAVANA UTR 22089904 22090044 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000403503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "YPEL1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11141 chr22 HAVANA UTR 22065034 22065197 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000403503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "YPEL1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11142 chr22 HAVANA UTR 22058371 22058399 . - . gene_id "ENSG00000100027.10"; transcript_id "ENST00000403503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YPEL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "YPEL1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150830.1"; havana_transcript "OTTHUMT00000320247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11143 chr22 ENSEMBL gene 22077172 22077471 . - . gene_id "ENSG00000244671.2"; transcript_id "ENSG00000244671.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL280P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL280P"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11144 chr22 ENSEMBL transcript 22077172 22077471 . - . gene_id "ENSG00000244671.2"; transcript_id "ENST00000496490.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL280P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL280P-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11145 chr22 ENSEMBL exon 22077172 22077471 . - . gene_id "ENSG00000244671.2"; transcript_id "ENST00000496490.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL280P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL280P-201"; exon_number 1; exon_id "ENSE00001864666.2"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11146 chr22 HAVANA gene 22108789 22221970 . - . gene_id "ENSG00000100030.10"; transcript_id "ENSG00000100030.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1"; level 1; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11147 chr22 HAVANA transcript 22108789 22221919 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11148 chr22 HAVANA exon 22221612 22221919 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 1; exon_id "ENSE00001838512.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11149 chr22 HAVANA CDS 22221612 22221730 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 1; exon_id "ENSE00001838512.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11150 chr22 HAVANA start_codon 22221728 22221730 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 1; exon_id "ENSE00001838512.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11151 chr22 HAVANA exon 22161953 22162135 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 2; exon_id "ENSE00000879359.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11152 chr22 HAVANA CDS 22161953 22162135 . - 1 gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 2; exon_id "ENSE00000879359.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11153 chr22 HAVANA exon 22160139 22160328 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 3; exon_id "ENSE00000879358.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11154 chr22 HAVANA CDS 22160139 22160328 . - 1 gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 3; exon_id "ENSE00000879358.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11155 chr22 HAVANA exon 22153301 22153417 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 4; exon_id "ENSE00000879357.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11156 chr22 HAVANA CDS 22153301 22153417 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 4; exon_id "ENSE00000879357.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11157 chr22 HAVANA exon 22142983 22143097 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 5; exon_id "ENSE00001650159.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11158 chr22 HAVANA CDS 22142983 22143097 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 5; exon_id "ENSE00001650159.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11159 chr22 HAVANA exon 22142546 22142677 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 6; exon_id "ENSE00000651102.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11160 chr22 HAVANA CDS 22142546 22142677 . - 2 gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 6; exon_id "ENSE00000651102.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11161 chr22 HAVANA exon 22127162 22127271 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 7; exon_id "ENSE00000651101.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11162 chr22 HAVANA CDS 22127162 22127271 . - 2 gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 7; exon_id "ENSE00000651101.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11163 chr22 HAVANA exon 22123484 22123609 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 8; exon_id "ENSE00001135958.3"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11164 chr22 HAVANA CDS 22123496 22123609 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 8; exon_id "ENSE00001135958.3"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11165 chr22 HAVANA stop_codon 22123493 22123495 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 8; exon_id "ENSE00001135958.3"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11166 chr22 HAVANA exon 22108789 22118529 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; exon_number 9; exon_id "ENSE00001857706.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11167 chr22 HAVANA UTR 22221731 22221919 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11168 chr22 HAVANA UTR 22123484 22123495 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11169 chr22 HAVANA UTR 22108789 22118529 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000215832.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000075396.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11170 chr22 HAVANA transcript 22118273 22123717 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000491588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MAPK1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11171 chr22 HAVANA exon 22123484 22123717 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000491588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MAPK1-003"; exon_number 1; exon_id "ENSE00001883497.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11172 chr22 HAVANA exon 22118273 22118529 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000491588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MAPK1-003"; exon_number 2; exon_id "ENSE00001885512.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11173 chr22 HAVANA transcript 22123329 22221970 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11174 chr22 HAVANA exon 22221612 22221970 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 1; exon_id "ENSE00001135965.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11175 chr22 HAVANA CDS 22221612 22221730 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 1; exon_id "ENSE00001135965.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11176 chr22 HAVANA start_codon 22221728 22221730 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 1; exon_id "ENSE00001135965.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11177 chr22 HAVANA exon 22161953 22162135 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 2; exon_id "ENSE00000879359.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11178 chr22 HAVANA CDS 22161953 22162135 . - 1 gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 2; exon_id "ENSE00000879359.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11179 chr22 HAVANA exon 22160139 22160328 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 3; exon_id "ENSE00000879358.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11180 chr22 HAVANA CDS 22160139 22160328 . - 1 gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 3; exon_id "ENSE00000879358.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11181 chr22 HAVANA exon 22153301 22153417 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 4; exon_id "ENSE00000879357.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11182 chr22 HAVANA CDS 22153301 22153417 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 4; exon_id "ENSE00000879357.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11183 chr22 HAVANA exon 22142983 22143097 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 5; exon_id "ENSE00001650159.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11184 chr22 HAVANA CDS 22142983 22143097 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 5; exon_id "ENSE00001650159.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11185 chr22 HAVANA exon 22142546 22142677 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 6; exon_id "ENSE00000651102.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11186 chr22 HAVANA CDS 22142546 22142677 . - 2 gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 6; exon_id "ENSE00000651102.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11187 chr22 HAVANA exon 22127162 22127271 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 7; exon_id "ENSE00000651101.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11188 chr22 HAVANA CDS 22127162 22127271 . - 2 gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 7; exon_id "ENSE00000651101.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11189 chr22 HAVANA exon 22123329 22123609 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 8; exon_id "ENSE00001535106.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11190 chr22 HAVANA CDS 22123496 22123609 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 8; exon_id "ENSE00001535106.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11191 chr22 HAVANA stop_codon 22123493 22123495 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; exon_number 8; exon_id "ENSE00001535106.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11192 chr22 HAVANA UTR 22221731 22221970 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11193 chr22 HAVANA UTR 22123329 22123495 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000398822.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2"; havana_transcript "OTTHUMT00000268186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11194 chr22 ENSEMBL transcript 22123493 22221730 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11195 chr22 ENSEMBL exon 22221612 22221730 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 1; exon_id "ENSE00002235201.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11196 chr22 ENSEMBL CDS 22221612 22221730 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 1; exon_id "ENSE00002235201.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11197 chr22 ENSEMBL start_codon 22221728 22221730 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 1; exon_id "ENSE00002235201.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11198 chr22 ENSEMBL exon 22161953 22162135 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 2; exon_id "ENSE00000879359.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11199 chr22 ENSEMBL CDS 22161953 22162135 . - 1 gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 2; exon_id "ENSE00000879359.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11200 chr22 ENSEMBL exon 22160139 22160328 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 3; exon_id "ENSE00000879358.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11201 chr22 ENSEMBL CDS 22160139 22160328 . - 1 gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 3; exon_id "ENSE00000879358.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11202 chr22 ENSEMBL exon 22153301 22153417 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 4; exon_id "ENSE00000879357.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11203 chr22 ENSEMBL CDS 22153301 22153417 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 4; exon_id "ENSE00000879357.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11204 chr22 ENSEMBL exon 22142983 22143097 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 5; exon_id "ENSE00001650159.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11205 chr22 ENSEMBL CDS 22142983 22143097 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 5; exon_id "ENSE00001650159.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11206 chr22 ENSEMBL exon 22127162 22127271 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 6; exon_id "ENSE00000651101.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11207 chr22 ENSEMBL CDS 22127162 22127271 . - 2 gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 6; exon_id "ENSE00000651101.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11208 chr22 ENSEMBL exon 22123493 22123609 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 7; exon_id "ENSE00002248625.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11209 chr22 ENSEMBL CDS 22123496 22123609 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 7; exon_id "ENSE00002248625.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11210 chr22 ENSEMBL stop_codon 22123493 22123495 . - 0 gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; exon_number 7; exon_id "ENSE00002248625.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11211 chr22 ENSEMBL UTR 22123493 22123495 . - . gene_id "ENSG00000100030.10"; transcript_id "ENST00000544786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAPK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAPK1-201"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS13795.1"; havana_gene "OTTHUMG00000030508.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11212 chr22 ENSEMBL gene 22146723 22146813 . + . gene_id "ENSG00000200985.1"; transcript_id "ENSG00000200985.1"; gene_type "rRNA"; gene_status "KNOWN"; gene_name "RNA5SP493"; transcript_type "rRNA"; transcript_status "KNOWN"; transcript_name "RNA5SP493"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11213 chr22 ENSEMBL transcript 22146723 22146813 . + . gene_id "ENSG00000200985.1"; transcript_id "ENST00000364115.1"; gene_type "rRNA"; gene_status "KNOWN"; gene_name "RNA5SP493"; transcript_type "rRNA"; transcript_status "KNOWN"; transcript_name "RNA5SP493-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11214 chr22 ENSEMBL exon 22146723 22146813 . + . gene_id "ENSG00000200985.1"; transcript_id "ENST00000364115.1"; gene_type "rRNA"; gene_status "KNOWN"; gene_name "RNA5SP493"; transcript_type "rRNA"; transcript_status "KNOWN"; transcript_name "RNA5SP493-201"; exon_number 1; exon_id "ENSE00001438878.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11215 chr22 HAVANA gene 22239621 22240012 . - . gene_id "ENSG00000225544.1"; transcript_id "ENSG00000225544.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1027C11.4"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1027C11.4"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150829.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11216 chr22 HAVANA transcript 22239621 22240012 . - . gene_id "ENSG00000225544.1"; transcript_id "ENST00000435222.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1027C11.4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1027C11.4-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150829.1"; havana_transcript "OTTHUMT00000320244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11217 chr22 HAVANA exon 22239621 22240012 . - . gene_id "ENSG00000225544.1"; transcript_id "ENST00000435222.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1027C11.4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1027C11.4-001"; exon_number 1; exon_id "ENSE00001720771.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150829.1"; havana_transcript "OTTHUMT00000320244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11218 chr22 HAVANA gene 22273793 22307209 . - . gene_id "ENSG00000100034.9"; transcript_id "ENSG00000100034.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F"; level 1; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11219 chr22 HAVANA transcript 22273793 22307209 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11220 chr22 HAVANA exon 22307164 22307209 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 1; exon_id "ENSE00001258870.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11221 chr22 HAVANA exon 22300215 22300480 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 2; exon_id "ENSE00001135900.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11222 chr22 HAVANA CDS 22300215 22300420 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 2; exon_id "ENSE00001135900.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11223 chr22 HAVANA start_codon 22300418 22300420 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 2; exon_id "ENSE00001135900.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11224 chr22 HAVANA exon 22293904 22294052 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 3; exon_id "ENSE00003496968.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11225 chr22 HAVANA CDS 22293904 22294052 . - 1 gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 3; exon_id "ENSE00003496968.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11226 chr22 HAVANA exon 22288396 22288598 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 4; exon_id "ENSE00003581302.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11227 chr22 HAVANA CDS 22288396 22288598 . - 2 gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 4; exon_id "ENSE00003581302.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11228 chr22 HAVANA exon 22287763 22287951 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 5; exon_id "ENSE00000651115.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11229 chr22 HAVANA CDS 22287763 22287951 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 5; exon_id "ENSE00000651115.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11230 chr22 HAVANA exon 22285520 22285663 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 6; exon_id "ENSE00000651114.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11231 chr22 HAVANA CDS 22285520 22285663 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 6; exon_id "ENSE00000651114.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11232 chr22 HAVANA exon 22279942 22280035 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 7; exon_id "ENSE00003655517.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11233 chr22 HAVANA CDS 22279942 22280035 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 7; exon_id "ENSE00003655517.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11234 chr22 HAVANA exon 22273793 22277844 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 8; exon_id "ENSE00001189657.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11235 chr22 HAVANA CDS 22277468 22277844 . - 2 gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 8; exon_id "ENSE00001189657.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11236 chr22 HAVANA stop_codon 22277465 22277467 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; exon_number 8; exon_id "ENSE00001189657.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11237 chr22 HAVANA UTR 22307164 22307209 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11238 chr22 HAVANA UTR 22300421 22300480 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11239 chr22 HAVANA UTR 22273793 22277467 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000263212.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13796.1"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320267.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11240 chr22 HAVANA transcript 22273800 22292956 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11241 chr22 HAVANA exon 22292045 22292956 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; exon_number 1; exon_id "ENSE00001552729.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11242 chr22 HAVANA exon 22288396 22288598 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; exon_number 2; exon_id "ENSE00003596919.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11243 chr22 HAVANA CDS 22288396 22288449 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; exon_number 2; exon_id "ENSE00003596919.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11244 chr22 HAVANA start_codon 22288447 22288449 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; exon_number 2; exon_id "ENSE00003596919.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11245 chr22 HAVANA exon 22287763 22287951 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; exon_number 3; exon_id "ENSE00000651115.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11246 chr22 HAVANA CDS 22287763 22287951 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; exon_number 3; exon_id "ENSE00000651115.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11247 chr22 HAVANA exon 22285520 22285663 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; exon_number 4; exon_id "ENSE00000651114.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11248 chr22 HAVANA CDS 22285520 22285663 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; exon_number 4; exon_id "ENSE00000651114.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11249 chr22 HAVANA exon 22279942 22280035 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; exon_number 5; exon_id "ENSE00003655517.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11250 chr22 HAVANA CDS 22279942 22280035 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; exon_number 5; exon_id "ENSE00003655517.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11251 chr22 HAVANA exon 22273800 22277844 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; exon_number 6; exon_id "ENSE00001551855.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11252 chr22 HAVANA CDS 22277468 22277844 . - 2 gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; exon_number 6; exon_id "ENSE00001551855.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11253 chr22 HAVANA stop_codon 22277465 22277467 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; exon_number 6; exon_id "ENSE00001551855.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11254 chr22 HAVANA UTR 22292045 22292956 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11255 chr22 HAVANA UTR 22288450 22288598 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11256 chr22 HAVANA UTR 22273800 22277467 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000407142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320268.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11257 chr22 ENSEMBL transcript 22277200 22292934 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11258 chr22 ENSEMBL exon 22292576 22292934 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; exon_number 1; exon_id "ENSE00002223810.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11259 chr22 ENSEMBL CDS 22292576 22292618 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; exon_number 1; exon_id "ENSE00002223810.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11260 chr22 ENSEMBL start_codon 22292616 22292618 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; exon_number 1; exon_id "ENSE00002223810.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11261 chr22 ENSEMBL exon 22288396 22288598 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; exon_number 2; exon_id "ENSE00003581302.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11262 chr22 ENSEMBL CDS 22288396 22288598 . - 2 gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; exon_number 2; exon_id "ENSE00003581302.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11263 chr22 ENSEMBL exon 22287763 22287951 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; exon_number 3; exon_id "ENSE00000651115.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11264 chr22 ENSEMBL CDS 22287763 22287951 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; exon_number 3; exon_id "ENSE00000651115.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11265 chr22 ENSEMBL exon 22285520 22285663 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; exon_number 4; exon_id "ENSE00000651114.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11266 chr22 ENSEMBL CDS 22285520 22285663 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; exon_number 4; exon_id "ENSE00000651114.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11267 chr22 ENSEMBL exon 22279942 22280035 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; exon_number 5; exon_id "ENSE00003655517.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11268 chr22 ENSEMBL CDS 22279942 22280035 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; exon_number 5; exon_id "ENSE00003655517.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11269 chr22 ENSEMBL exon 22277200 22277844 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; exon_number 6; exon_id "ENSE00002270105.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11270 chr22 ENSEMBL CDS 22277468 22277844 . - 2 gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; exon_number 6; exon_id "ENSE00002270105.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11271 chr22 ENSEMBL stop_codon 22277465 22277467 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; exon_number 6; exon_id "ENSE00002270105.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11272 chr22 ENSEMBL UTR 22292619 22292934 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11273 chr22 ENSEMBL UTR 22277200 22277467 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000538191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PPM1F-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150835.10";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11274 chr22 HAVANA transcript 22277498 22280435 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000496143.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPM1F-006"; level 2; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320272.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11275 chr22 HAVANA exon 22280333 22280435 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000496143.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPM1F-006"; exon_number 1; exon_id "ENSE00001887772.1"; level 2; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320272.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11276 chr22 HAVANA exon 22279942 22280035 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000496143.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPM1F-006"; exon_number 2; exon_id "ENSE00003678438.1"; level 2; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320272.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11277 chr22 HAVANA exon 22277498 22277844 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000496143.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPM1F-006"; exon_number 3; exon_id "ENSE00001887771.1"; level 2; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320272.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11278 chr22 HAVANA transcript 22279249 22285620 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000484588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPM1F-005"; level 2; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320271.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11279 chr22 HAVANA exon 22285520 22285620 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000484588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPM1F-005"; exon_number 1; exon_id "ENSE00001845486.1"; level 2; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320271.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11280 chr22 HAVANA exon 22279942 22280035 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000484588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPM1F-005"; exon_number 2; exon_id "ENSE00003678438.1"; level 2; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320271.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11281 chr22 HAVANA exon 22279249 22279401 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000484588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPM1F-005"; exon_number 3; exon_id "ENSE00001877042.1"; level 2; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320271.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11282 chr22 HAVANA transcript 22279249 22307203 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11283 chr22 HAVANA exon 22307164 22307203 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 1; exon_id "ENSE00001899386.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11284 chr22 HAVANA exon 22300215 22300480 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 2; exon_id "ENSE00001135900.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11285 chr22 HAVANA CDS 22300215 22300420 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 2; exon_id "ENSE00001135900.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11286 chr22 HAVANA start_codon 22300418 22300420 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 2; exon_id "ENSE00001135900.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11287 chr22 HAVANA exon 22293904 22294052 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 3; exon_id "ENSE00003496968.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11288 chr22 HAVANA CDS 22293904 22294052 . - 1 gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 3; exon_id "ENSE00003496968.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11289 chr22 HAVANA exon 22288396 22288598 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 4; exon_id "ENSE00003581302.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11290 chr22 HAVANA CDS 22288396 22288598 . - 2 gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 4; exon_id "ENSE00003581302.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11291 chr22 HAVANA exon 22287763 22287951 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 5; exon_id "ENSE00000651115.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11292 chr22 HAVANA CDS 22287763 22287951 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 5; exon_id "ENSE00000651115.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11293 chr22 HAVANA exon 22285520 22285663 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 6; exon_id "ENSE00000651114.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11294 chr22 HAVANA CDS 22285520 22285663 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 6; exon_id "ENSE00000651114.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11295 chr22 HAVANA exon 22279249 22280035 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 7; exon_id "ENSE00001852523.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11296 chr22 HAVANA CDS 22279844 22280035 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 7; exon_id "ENSE00001852523.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11297 chr22 HAVANA stop_codon 22279841 22279843 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; exon_number 7; exon_id "ENSE00001852523.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11298 chr22 HAVANA UTR 22307164 22307203 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11299 chr22 HAVANA UTR 22300421 22300480 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11300 chr22 HAVANA UTR 22279249 22279843 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000397495.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PPM1F-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320269.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11301 chr22 HAVANA transcript 22285638 22295029 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000445205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320270.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11302 chr22 HAVANA exon 22294947 22295029 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000445205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-004"; exon_number 1; exon_id "ENSE00001656972.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320270.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11303 chr22 HAVANA exon 22293904 22294052 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000445205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-004"; exon_number 2; exon_id "ENSE00003516123.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320270.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11304 chr22 HAVANA exon 22288396 22288598 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000445205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-004"; exon_number 3; exon_id "ENSE00003596919.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320270.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11305 chr22 HAVANA CDS 22288396 22288449 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000445205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-004"; exon_number 3; exon_id "ENSE00003596919.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320270.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11306 chr22 HAVANA start_codon 22288447 22288449 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000445205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-004"; exon_number 3; exon_id "ENSE00003596919.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320270.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11307 chr22 HAVANA exon 22287763 22287951 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000445205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-004"; exon_number 4; exon_id "ENSE00000651115.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320270.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11308 chr22 HAVANA CDS 22287763 22287951 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000445205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-004"; exon_number 4; exon_id "ENSE00000651115.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320270.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11309 chr22 HAVANA exon 22285638 22285663 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000445205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-004"; exon_number 5; exon_id "ENSE00001692402.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320270.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11310 chr22 HAVANA CDS 22285638 22285663 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000445205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-004"; exon_number 5; exon_id "ENSE00001692402.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320270.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11311 chr22 HAVANA UTR 22294947 22295029 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000445205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320270.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11312 chr22 HAVANA UTR 22293904 22294052 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000445205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320270.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11313 chr22 HAVANA UTR 22288450 22288598 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000445205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320270.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11314 chr22 HAVANA transcript 22288396 22292948 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000424647.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320273.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11315 chr22 HAVANA exon 22292576 22292948 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000424647.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-007"; exon_number 1; exon_id "ENSE00001695676.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320273.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11316 chr22 HAVANA CDS 22292576 22292618 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000424647.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-007"; exon_number 1; exon_id "ENSE00001695676.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320273.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11317 chr22 HAVANA start_codon 22292616 22292618 . - 0 gene_id "ENSG00000100034.9"; transcript_id "ENST00000424647.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-007"; exon_number 1; exon_id "ENSE00001695676.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320273.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11318 chr22 HAVANA exon 22288396 22288598 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000424647.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-007"; exon_number 2; exon_id "ENSE00003467239.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320273.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11319 chr22 HAVANA CDS 22288396 22288598 . - 2 gene_id "ENSG00000100034.9"; transcript_id "ENST00000424647.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-007"; exon_number 2; exon_id "ENSE00003467239.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320273.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11320 chr22 HAVANA UTR 22292619 22292948 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000424647.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PPM1F-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320273.9";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11321 chr22 HAVANA transcript 22291334 22292903 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000486259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPM1F-008"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320274.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11322 chr22 HAVANA exon 22292576 22292903 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000486259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPM1F-008"; exon_number 1; exon_id "ENSE00001928072.1"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320274.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11323 chr22 HAVANA exon 22291334 22291588 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000486259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPM1F-008"; exon_number 2; exon_id "ENSE00001879910.1"; level 2; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320274.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11324 chr22 HAVANA transcript 22306392 22307193 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000497072.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPM1F-009"; level 2; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320275.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11325 chr22 HAVANA exon 22307164 22307193 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000497072.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPM1F-009"; exon_number 1; exon_id "ENSE00001881553.1"; level 2; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320275.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11326 chr22 HAVANA exon 22306392 22306520 . - . gene_id "ENSG00000100034.9"; transcript_id "ENST00000497072.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PPM1F"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PPM1F-009"; exon_number 2; exon_id "ENSE00001873813.1"; level 2; havana_gene "OTTHUMG00000150835.10"; havana_transcript "OTTHUMT00000320275.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11327 chr22 HAVANA gene 22292609 22297799 . + . gene_id "ENSG00000224086.3"; transcript_id "ENSG00000224086.3"; gene_type "antisense"; gene_status "NOVEL"; gene_name "LL22NC03-86G7.1"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "LL22NC03-86G7.1"; level 2; havana_gene "OTTHUMG00000153510.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11328 chr22 ENSEMBL transcript 22292609 22294263 . + . gene_id "ENSG00000224086.3"; transcript_id "ENST00000538634.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "LL22NC03-86G7.1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "LL22NC03-86G7.1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000153510.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11329 chr22 ENSEMBL exon 22292609 22294263 . + . gene_id "ENSG00000224086.3"; transcript_id "ENST00000538634.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "LL22NC03-86G7.1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "LL22NC03-86G7.1-201"; exon_number 1; exon_id "ENSE00002209605.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000153510.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11330 chr22 HAVANA transcript 22292665 22297799 . + . gene_id "ENSG00000224086.3"; transcript_id "ENST00000458178.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "LL22NC03-86G7.1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "LL22NC03-86G7.1-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000153510.1"; havana_transcript "OTTHUMT00000331447.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11331 chr22 HAVANA exon 22292665 22293985 . + . gene_id "ENSG00000224086.3"; transcript_id "ENST00000458178.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "LL22NC03-86G7.1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "LL22NC03-86G7.1-001"; exon_number 1; exon_id "ENSE00001615538.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000153510.1"; havana_transcript "OTTHUMT00000331447.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11332 chr22 HAVANA exon 22295474 22297799 . + . gene_id "ENSG00000224086.3"; transcript_id "ENST00000458178.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "LL22NC03-86G7.1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "LL22NC03-86G7.1-001"; exon_number 2; exon_id "ENSE00001738777.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000153510.1"; havana_transcript "OTTHUMT00000331447.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11333 chr22 HAVANA gene 22311397 22337213 . - . gene_id "ENSG00000100038.15"; transcript_id "ENSG00000100038.15"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B"; level 2; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11334 chr22 HAVANA transcript 22311397 22337213 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11335 chr22 HAVANA exon 22337127 22337213 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 1; exon_id "ENSE00002077854.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11336 chr22 HAVANA exon 22330012 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 2; exon_id "ENSE00003662250.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11337 chr22 HAVANA CDS 22330012 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 2; exon_id "ENSE00003662250.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11338 chr22 HAVANA start_codon 22330079 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 2; exon_id "ENSE00003662250.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11339 chr22 HAVANA exon 22328729 22328860 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 3; exon_id "ENSE00003621283.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11340 chr22 HAVANA CDS 22328729 22328860 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 3; exon_id "ENSE00003621283.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11341 chr22 HAVANA exon 22326984 22327090 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 4; exon_id "ENSE00003681474.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11342 chr22 HAVANA CDS 22326984 22327090 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 4; exon_id "ENSE00003681474.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11343 chr22 HAVANA exon 22326249 22326323 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 5; exon_id "ENSE00001756605.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11344 chr22 HAVANA CDS 22326249 22326323 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 5; exon_id "ENSE00001756605.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11345 chr22 HAVANA exon 22324582 22324778 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 6; exon_id "ENSE00003589652.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11346 chr22 HAVANA CDS 22324582 22324778 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 6; exon_id "ENSE00003589652.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11347 chr22 HAVANA exon 22322991 22323147 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 7; exon_id "ENSE00003568534.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11348 chr22 HAVANA CDS 22322991 22323147 . - 1 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 7; exon_id "ENSE00003568534.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11349 chr22 HAVANA exon 22321975 22322088 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 8; exon_id "ENSE00003687408.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11350 chr22 HAVANA CDS 22321975 22322088 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 8; exon_id "ENSE00003687408.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11351 chr22 HAVANA exon 22319657 22319747 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 9; exon_id "ENSE00003640448.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11352 chr22 HAVANA CDS 22319657 22319747 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 9; exon_id "ENSE00003640448.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11353 chr22 HAVANA exon 22318533 22318687 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 10; exon_id "ENSE00003694535.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11354 chr22 HAVANA CDS 22318533 22318687 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 10; exon_id "ENSE00003694535.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11355 chr22 HAVANA exon 22318295 22318400 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 11; exon_id "ENSE00003522122.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11356 chr22 HAVANA CDS 22318295 22318400 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 11; exon_id "ENSE00003522122.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11357 chr22 HAVANA exon 22317119 22317265 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 12; exon_id "ENSE00003577002.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11358 chr22 HAVANA CDS 22317119 22317265 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 12; exon_id "ENSE00003577002.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11359 chr22 HAVANA exon 22316801 22316974 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 13; exon_id "ENSE00003593806.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11360 chr22 HAVANA CDS 22316801 22316974 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 13; exon_id "ENSE00003593806.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11361 chr22 HAVANA exon 22314693 22314821 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 14; exon_id "ENSE00003465334.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11362 chr22 HAVANA CDS 22314693 22314821 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 14; exon_id "ENSE00003465334.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11363 chr22 HAVANA exon 22313959 22314108 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 15; exon_id "ENSE00003633449.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11364 chr22 HAVANA CDS 22313959 22314108 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 15; exon_id "ENSE00003633449.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11365 chr22 HAVANA exon 22313504 22313604 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 16; exon_id "ENSE00003501188.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11366 chr22 HAVANA CDS 22313504 22313604 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 16; exon_id "ENSE00003501188.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11367 chr22 HAVANA exon 22312864 22313065 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 17; exon_id "ENSE00003559313.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11368 chr22 HAVANA CDS 22312864 22313065 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 17; exon_id "ENSE00003559313.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11369 chr22 HAVANA exon 22311397 22311967 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 18; exon_id "ENSE00001915921.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11370 chr22 HAVANA CDS 22311489 22311967 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 18; exon_id "ENSE00001915921.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11371 chr22 HAVANA stop_codon 22311486 22311488 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; exon_number 18; exon_id "ENSE00001915921.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11372 chr22 HAVANA UTR 22337127 22337213 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11373 chr22 HAVANA UTR 22330082 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11374 chr22 HAVANA UTR 22311397 22311488 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000357179.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320249.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11375 chr22 HAVANA transcript 22311399 22323112 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11376 chr22 HAVANA exon 22322991 22323112 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 1; exon_id "ENSE00001734526.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11377 chr22 HAVANA CDS 22322991 22323112 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 1; exon_id "ENSE00001734526.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11378 chr22 HAVANA exon 22321975 22322088 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 2; exon_id "ENSE00003687408.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11379 chr22 HAVANA CDS 22321975 22322088 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 2; exon_id "ENSE00003687408.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11380 chr22 HAVANA exon 22319657 22319747 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 3; exon_id "ENSE00003640448.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11381 chr22 HAVANA CDS 22319657 22319747 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 3; exon_id "ENSE00003640448.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11382 chr22 HAVANA exon 22318533 22318687 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 4; exon_id "ENSE00003694535.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11383 chr22 HAVANA CDS 22318533 22318687 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 4; exon_id "ENSE00003694535.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11384 chr22 HAVANA exon 22318295 22318400 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 5; exon_id "ENSE00003522122.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11385 chr22 HAVANA CDS 22318295 22318400 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 5; exon_id "ENSE00003522122.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11386 chr22 HAVANA exon 22317119 22317265 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 6; exon_id "ENSE00003577002.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11387 chr22 HAVANA CDS 22317119 22317265 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 6; exon_id "ENSE00003577002.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11388 chr22 HAVANA exon 22316801 22316974 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 7; exon_id "ENSE00003593806.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11389 chr22 HAVANA CDS 22316801 22316974 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 7; exon_id "ENSE00003593806.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11390 chr22 HAVANA exon 22314693 22314821 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 8; exon_id "ENSE00003465334.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11391 chr22 HAVANA CDS 22314693 22314821 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 8; exon_id "ENSE00003465334.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11392 chr22 HAVANA exon 22313959 22314108 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 9; exon_id "ENSE00003633449.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11393 chr22 HAVANA CDS 22313959 22314108 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 9; exon_id "ENSE00003633449.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11394 chr22 HAVANA exon 22313504 22313604 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 10; exon_id "ENSE00003501188.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11395 chr22 HAVANA CDS 22313504 22313604 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 10; exon_id "ENSE00003501188.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11396 chr22 HAVANA exon 22311399 22313065 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 11; exon_id "ENSE00001657896.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11397 chr22 HAVANA CDS 22312781 22313065 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 11; exon_id "ENSE00001657896.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11398 chr22 HAVANA stop_codon 22312778 22312780 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; exon_number 11; exon_id "ENSE00001657896.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11399 chr22 HAVANA UTR 22311399 22312780 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457270.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TOP3B-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320254.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11400 chr22 HAVANA transcript 22311399 22337187 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11401 chr22 HAVANA exon 22337127 22337187 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 1; exon_id "ENSE00001609940.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11402 chr22 HAVANA exon 22330012 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 2; exon_id "ENSE00003662250.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11403 chr22 HAVANA CDS 22330012 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 2; exon_id "ENSE00003662250.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11404 chr22 HAVANA start_codon 22330079 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 2; exon_id "ENSE00003662250.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11405 chr22 HAVANA exon 22328729 22328860 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 3; exon_id "ENSE00003621283.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11406 chr22 HAVANA CDS 22328729 22328860 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 3; exon_id "ENSE00003621283.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11407 chr22 HAVANA exon 22326984 22327090 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 4; exon_id "ENSE00003681474.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11408 chr22 HAVANA CDS 22326984 22327090 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 4; exon_id "ENSE00003681474.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11409 chr22 HAVANA exon 22326249 22326323 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 5; exon_id "ENSE00001756605.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11410 chr22 HAVANA CDS 22326249 22326323 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 5; exon_id "ENSE00001756605.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11411 chr22 HAVANA exon 22325352 22325433 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 6; exon_id "ENSE00001750273.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11412 chr22 HAVANA CDS 22325431 22325433 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 6; exon_id "ENSE00001750273.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11413 chr22 HAVANA stop_codon 22325428 22325430 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 6; exon_id "ENSE00001750273.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11414 chr22 HAVANA exon 22324582 22324778 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 7; exon_id "ENSE00003471381.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11415 chr22 HAVANA exon 22322991 22323147 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 8; exon_id "ENSE00003499231.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11416 chr22 HAVANA exon 22321975 22322088 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 9; exon_id "ENSE00003676769.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11417 chr22 HAVANA exon 22319657 22319747 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 10; exon_id "ENSE00003486217.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11418 chr22 HAVANA exon 22318533 22318687 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 11; exon_id "ENSE00003540844.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11419 chr22 HAVANA exon 22318295 22318400 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 12; exon_id "ENSE00003460646.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11420 chr22 HAVANA exon 22316801 22317265 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 13; exon_id "ENSE00001708995.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11421 chr22 HAVANA exon 22314693 22314821 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 14; exon_id "ENSE00003631836.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11422 chr22 HAVANA exon 22313959 22314108 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 15; exon_id "ENSE00003573433.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11423 chr22 HAVANA exon 22313504 22313604 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 16; exon_id "ENSE00003516078.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11424 chr22 HAVANA exon 22312864 22313065 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 17; exon_id "ENSE00003515537.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11425 chr22 HAVANA exon 22311399 22311967 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; exon_number 18; exon_id "ENSE00001429614.4"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11426 chr22 HAVANA UTR 22337127 22337187 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11427 chr22 HAVANA UTR 22330082 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11428 chr22 HAVANA UTR 22325352 22325430 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11429 chr22 HAVANA UTR 22324582 22324778 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11430 chr22 HAVANA UTR 22322991 22323147 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11431 chr22 HAVANA UTR 22321975 22322088 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11432 chr22 HAVANA UTR 22319657 22319747 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11433 chr22 HAVANA UTR 22318533 22318687 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11434 chr22 HAVANA UTR 22318295 22318400 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11435 chr22 HAVANA UTR 22316801 22317265 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11436 chr22 HAVANA UTR 22314693 22314821 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11437 chr22 HAVANA UTR 22313959 22314108 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11438 chr22 HAVANA UTR 22313504 22313604 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11439 chr22 HAVANA UTR 22312864 22313065 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11440 chr22 HAVANA UTR 22311399 22311967 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000457179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-004"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320252.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11441 chr22 HAVANA transcript 22311403 22337147 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11442 chr22 HAVANA exon 22336811 22337147 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 1; exon_id "ENSE00001535063.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11443 chr22 HAVANA exon 22330012 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 2; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11444 chr22 HAVANA CDS 22330012 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 2; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11445 chr22 HAVANA start_codon 22330079 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 2; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11446 chr22 HAVANA exon 22328729 22328860 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 3; exon_id "ENSE00003621283.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11447 chr22 HAVANA CDS 22328729 22328860 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 3; exon_id "ENSE00003621283.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11448 chr22 HAVANA exon 22326984 22327090 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 4; exon_id "ENSE00003681474.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11449 chr22 HAVANA CDS 22326984 22327090 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 4; exon_id "ENSE00003681474.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11450 chr22 HAVANA exon 22326249 22326323 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 5; exon_id "ENSE00001756605.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11451 chr22 HAVANA CDS 22326249 22326323 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 5; exon_id "ENSE00001756605.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11452 chr22 HAVANA exon 22324582 22324778 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 6; exon_id "ENSE00003589652.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11453 chr22 HAVANA CDS 22324582 22324778 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 6; exon_id "ENSE00003589652.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11454 chr22 HAVANA exon 22322991 22323147 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 7; exon_id "ENSE00003568534.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11455 chr22 HAVANA CDS 22322991 22323147 . - 1 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 7; exon_id "ENSE00003568534.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11456 chr22 HAVANA exon 22321975 22322088 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 8; exon_id "ENSE00003687408.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11457 chr22 HAVANA CDS 22321975 22322088 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 8; exon_id "ENSE00003687408.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11458 chr22 HAVANA exon 22319657 22319747 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 9; exon_id "ENSE00003640448.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11459 chr22 HAVANA CDS 22319657 22319747 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 9; exon_id "ENSE00003640448.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11460 chr22 HAVANA exon 22318533 22318687 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 10; exon_id "ENSE00003694535.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11461 chr22 HAVANA CDS 22318533 22318687 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 10; exon_id "ENSE00003694535.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11462 chr22 HAVANA exon 22318295 22318400 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 11; exon_id "ENSE00003522122.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11463 chr22 HAVANA CDS 22318295 22318400 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 11; exon_id "ENSE00003522122.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11464 chr22 HAVANA exon 22317119 22317265 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 12; exon_id "ENSE00003577002.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11465 chr22 HAVANA CDS 22317119 22317265 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 12; exon_id "ENSE00003577002.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11466 chr22 HAVANA exon 22316801 22316974 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 13; exon_id "ENSE00003593806.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11467 chr22 HAVANA CDS 22316801 22316974 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 13; exon_id "ENSE00003593806.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11468 chr22 HAVANA exon 22314693 22314821 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 14; exon_id "ENSE00003465334.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11469 chr22 HAVANA CDS 22314693 22314821 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 14; exon_id "ENSE00003465334.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11470 chr22 HAVANA exon 22313959 22314108 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 15; exon_id "ENSE00003633449.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11471 chr22 HAVANA CDS 22313959 22314108 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 15; exon_id "ENSE00003633449.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11472 chr22 HAVANA exon 22313504 22313604 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 16; exon_id "ENSE00003501188.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11473 chr22 HAVANA CDS 22313504 22313604 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 16; exon_id "ENSE00003501188.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11474 chr22 HAVANA exon 22312864 22313065 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 17; exon_id "ENSE00003559313.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11475 chr22 HAVANA CDS 22312864 22313065 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 17; exon_id "ENSE00003559313.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
11476 chr22 HAVANA exon 22311403 22311967 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 18; exon_id "ENSE00001869872.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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diff changeset
11477 chr22 HAVANA CDS 22311489 22311967 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 18; exon_id "ENSE00001869872.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
11478 chr22 HAVANA stop_codon 22311486 22311488 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; exon_number 18; exon_id "ENSE00001869872.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11479 chr22 HAVANA UTR 22336811 22337147 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11480 chr22 HAVANA UTR 22330082 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11481 chr22 HAVANA UTR 22311403 22311488 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000398793.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13797.1"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320251.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11482 chr22 HAVANA transcript 22311403 22337187 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11483 chr22 HAVANA exon 22337127 22337187 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 1; exon_id "ENSE00001609940.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11484 chr22 HAVANA exon 22330012 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 2; exon_id "ENSE00003662250.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11485 chr22 HAVANA CDS 22330012 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 2; exon_id "ENSE00003662250.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11486 chr22 HAVANA start_codon 22330079 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 2; exon_id "ENSE00003662250.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11487 chr22 HAVANA exon 22328729 22328860 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 3; exon_id "ENSE00003621283.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11488 chr22 HAVANA CDS 22328729 22328860 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 3; exon_id "ENSE00003621283.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11489 chr22 HAVANA exon 22326984 22327090 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 4; exon_id "ENSE00003681474.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11490 chr22 HAVANA CDS 22326984 22327090 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 4; exon_id "ENSE00003681474.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11491 chr22 HAVANA exon 22326249 22326323 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 5; exon_id "ENSE00001756605.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11492 chr22 HAVANA CDS 22326249 22326323 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 5; exon_id "ENSE00001756605.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11493 chr22 HAVANA exon 22325352 22325433 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 6; exon_id "ENSE00001750273.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11494 chr22 HAVANA CDS 22325431 22325433 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 6; exon_id "ENSE00001750273.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11495 chr22 HAVANA stop_codon 22325428 22325430 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 6; exon_id "ENSE00001750273.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11496 chr22 HAVANA exon 22324582 22324778 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 7; exon_id "ENSE00003471381.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11497 chr22 HAVANA exon 22322991 22323147 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 8; exon_id "ENSE00003499231.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11498 chr22 HAVANA exon 22321975 22322088 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 9; exon_id "ENSE00003676769.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11499 chr22 HAVANA exon 22319657 22319747 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 10; exon_id "ENSE00003486217.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11500 chr22 HAVANA exon 22318533 22318687 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 11; exon_id "ENSE00003540844.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11501 chr22 HAVANA exon 22318295 22318400 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 12; exon_id "ENSE00003460646.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11502 chr22 HAVANA exon 22317119 22317265 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 13; exon_id "ENSE00003553415.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11503 chr22 HAVANA exon 22316801 22316974 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 14; exon_id "ENSE00003480840.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11504 chr22 HAVANA exon 22314693 22314821 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 15; exon_id "ENSE00003631836.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11505 chr22 HAVANA exon 22313504 22314108 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 16; exon_id "ENSE00001594199.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11506 chr22 HAVANA exon 22311403 22313065 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; exon_number 17; exon_id "ENSE00001685910.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11507 chr22 HAVANA UTR 22337127 22337187 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11508 chr22 HAVANA UTR 22330082 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11509 chr22 HAVANA UTR 22325352 22325430 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11510 chr22 HAVANA UTR 22324582 22324778 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11511 chr22 HAVANA UTR 22322991 22323147 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11512 chr22 HAVANA UTR 22321975 22322088 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11513 chr22 HAVANA UTR 22319657 22319747 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11514 chr22 HAVANA UTR 22318533 22318687 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11515 chr22 HAVANA UTR 22318295 22318400 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11516 chr22 HAVANA UTR 22317119 22317265 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11517 chr22 HAVANA UTR 22316801 22316974 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11518 chr22 HAVANA UTR 22314693 22314821 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11519 chr22 HAVANA UTR 22313504 22314108 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11520 chr22 HAVANA UTR 22311403 22313065 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000444502.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-002"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320250.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11521 chr22 HAVANA transcript 22311404 22322022 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11522 chr22 HAVANA exon 22321975 22322022 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 1; exon_id "ENSE00001714258.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11523 chr22 HAVANA CDS 22321975 22322022 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 1; exon_id "ENSE00001714258.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11524 chr22 HAVANA exon 22319657 22319747 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 2; exon_id "ENSE00003640448.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11525 chr22 HAVANA CDS 22319657 22319747 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 2; exon_id "ENSE00003640448.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11526 chr22 HAVANA exon 22318533 22318687 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 3; exon_id "ENSE00003694535.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11527 chr22 HAVANA CDS 22318533 22318687 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 3; exon_id "ENSE00003694535.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11528 chr22 HAVANA exon 22318295 22318400 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 4; exon_id "ENSE00003522122.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11529 chr22 HAVANA CDS 22318295 22318400 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 4; exon_id "ENSE00003522122.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11530 chr22 HAVANA exon 22317119 22317392 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 5; exon_id "ENSE00001648587.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11531 chr22 HAVANA CDS 22317289 22317392 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 5; exon_id "ENSE00001648587.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11532 chr22 HAVANA stop_codon 22317286 22317288 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 5; exon_id "ENSE00001648587.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11533 chr22 HAVANA exon 22316801 22316974 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 6; exon_id "ENSE00003480840.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11534 chr22 HAVANA exon 22314693 22314821 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 7; exon_id "ENSE00003631836.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11535 chr22 HAVANA exon 22313959 22314108 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 8; exon_id "ENSE00003573433.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11536 chr22 HAVANA exon 22313504 22313604 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 9; exon_id "ENSE00003516078.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11537 chr22 HAVANA exon 22311404 22313065 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; exon_number 10; exon_id "ENSE00001638053.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11538 chr22 HAVANA UTR 22317119 22317288 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11539 chr22 HAVANA UTR 22316801 22316974 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11540 chr22 HAVANA UTR 22314693 22314821 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11541 chr22 HAVANA UTR 22313959 22314108 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11542 chr22 HAVANA UTR 22313504 22313604 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11543 chr22 HAVANA UTR 22311404 22313065 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000436282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TOP3B-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320253.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11544 chr22 ENSEMBL transcript 22313894 22337163 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11545 chr22 ENSEMBL exon 22337127 22337163 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 1; exon_id "ENSE00001632656.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11546 chr22 ENSEMBL exon 22330012 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 2; exon_id "ENSE00003551390.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11547 chr22 ENSEMBL exon 22328729 22328860 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 3; exon_id "ENSE00003650160.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11548 chr22 ENSEMBL exon 22326984 22327090 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 4; exon_id "ENSE00003502437.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11549 chr22 ENSEMBL exon 22322991 22323147 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 5; exon_id "ENSE00003499231.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11550 chr22 ENSEMBL exon 22321975 22322088 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 6; exon_id "ENSE00003680010.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11551 chr22 ENSEMBL CDS 22321975 22322013 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 6; exon_id "ENSE00003680010.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11552 chr22 ENSEMBL start_codon 22322011 22322013 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 6; exon_id "ENSE00003680010.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11553 chr22 ENSEMBL exon 22319657 22319747 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 7; exon_id "ENSE00003640448.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11554 chr22 ENSEMBL CDS 22319657 22319747 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 7; exon_id "ENSE00003640448.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11555 chr22 ENSEMBL exon 22318533 22318687 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 8; exon_id "ENSE00003694535.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11556 chr22 ENSEMBL CDS 22318533 22318687 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 8; exon_id "ENSE00003694535.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11557 chr22 ENSEMBL exon 22318295 22318400 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 9; exon_id "ENSE00003522122.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11558 chr22 ENSEMBL CDS 22318295 22318400 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 9; exon_id "ENSE00003522122.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11559 chr22 ENSEMBL exon 22317119 22317265 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 10; exon_id "ENSE00003577002.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11560 chr22 ENSEMBL CDS 22317119 22317265 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 10; exon_id "ENSE00003577002.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11561 chr22 ENSEMBL exon 22316500 22316974 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 11; exon_id "ENSE00003655551.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11562 chr22 ENSEMBL CDS 22316667 22316974 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 11; exon_id "ENSE00003655551.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11563 chr22 ENSEMBL stop_codon 22316664 22316666 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 11; exon_id "ENSE00003655551.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11564 chr22 ENSEMBL exon 22314693 22314821 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 12; exon_id "ENSE00003631836.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11565 chr22 ENSEMBL exon 22313894 22314108 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; exon_number 13; exon_id "ENSE00002221232.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11566 chr22 ENSEMBL UTR 22337127 22337163 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11567 chr22 ENSEMBL UTR 22330012 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11568 chr22 ENSEMBL UTR 22328729 22328860 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11569 chr22 ENSEMBL UTR 22326984 22327090 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11570 chr22 ENSEMBL UTR 22322991 22323147 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11571 chr22 ENSEMBL UTR 22322014 22322088 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11572 chr22 ENSEMBL UTR 22316500 22316666 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11573 chr22 ENSEMBL UTR 22314693 22314821 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11574 chr22 ENSEMBL UTR 22313894 22314108 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000413067.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000167438.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11575 chr22 HAVANA transcript 22316500 22317267 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000470338.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TOP3B-017"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320265.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11576 chr22 HAVANA exon 22317119 22317267 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000470338.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TOP3B-017"; exon_number 1; exon_id "ENSE00001880595.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320265.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11577 chr22 HAVANA exon 22316500 22316974 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000470338.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TOP3B-017"; exon_number 2; exon_id "ENSE00003604701.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320265.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11578 chr22 HAVANA transcript 22322991 22337177 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11579 chr22 HAVANA exon 22337127 22337177 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; exon_number 1; exon_id "ENSE00001795444.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11580 chr22 HAVANA exon 22330012 22330116 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; exon_number 2; exon_id "ENSE00001608995.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11581 chr22 HAVANA CDS 22330012 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; exon_number 2; exon_id "ENSE00001608995.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11582 chr22 HAVANA start_codon 22330079 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; exon_number 2; exon_id "ENSE00001608995.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11583 chr22 HAVANA exon 22328729 22328860 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; exon_number 3; exon_id "ENSE00003621283.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11584 chr22 HAVANA CDS 22328729 22328860 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; exon_number 3; exon_id "ENSE00003621283.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11585 chr22 HAVANA exon 22326984 22327090 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; exon_number 4; exon_id "ENSE00003681474.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11586 chr22 HAVANA CDS 22326984 22327090 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; exon_number 4; exon_id "ENSE00003681474.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11587 chr22 HAVANA exon 22326249 22326323 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; exon_number 5; exon_id "ENSE00001756605.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11588 chr22 HAVANA CDS 22326249 22326323 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; exon_number 5; exon_id "ENSE00001756605.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11589 chr22 HAVANA exon 22324582 22324778 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; exon_number 6; exon_id "ENSE00003589652.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11590 chr22 HAVANA CDS 22324582 22324778 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; exon_number 6; exon_id "ENSE00003589652.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11591 chr22 HAVANA exon 22322991 22323147 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; exon_number 7; exon_id "ENSE00003538846.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11592 chr22 HAVANA CDS 22322991 22323147 . - 1 gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; exon_number 7; exon_id "ENSE00003538846.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11593 chr22 HAVANA UTR 22337127 22337177 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11594 chr22 HAVANA UTR 22330082 22330116 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000424393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-012"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320260.11";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11595 chr22 HAVANA transcript 22324707 22326004 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000487485.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TOP3B-016"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320264.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11596 chr22 HAVANA exon 22325352 22326004 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000487485.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TOP3B-016"; exon_number 1; exon_id "ENSE00001855820.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320264.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11597 chr22 HAVANA exon 22324707 22324778 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000487485.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TOP3B-016"; exon_number 2; exon_id "ENSE00001898184.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320264.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11598 chr22 HAVANA transcript 22326267 22337163 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11599 chr22 HAVANA exon 22337127 22337163 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; exon_number 1; exon_id "ENSE00001632656.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11600 chr22 HAVANA exon 22330277 22330325 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; exon_number 2; exon_id "ENSE00001606296.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11601 chr22 HAVANA exon 22330012 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; exon_number 3; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11602 chr22 HAVANA CDS 22330012 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; exon_number 3; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11603 chr22 HAVANA start_codon 22330079 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; exon_number 3; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11604 chr22 HAVANA exon 22328729 22328860 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; exon_number 4; exon_id "ENSE00003621283.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11605 chr22 HAVANA CDS 22328729 22328860 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; exon_number 4; exon_id "ENSE00003621283.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11606 chr22 HAVANA exon 22326984 22327090 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; exon_number 5; exon_id "ENSE00003681474.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11607 chr22 HAVANA CDS 22326984 22327090 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; exon_number 5; exon_id "ENSE00003681474.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11608 chr22 HAVANA exon 22326267 22326323 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; exon_number 6; exon_id "ENSE00001765329.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11609 chr22 HAVANA CDS 22326267 22326323 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; exon_number 6; exon_id "ENSE00001765329.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11610 chr22 HAVANA UTR 22337127 22337163 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11611 chr22 HAVANA UTR 22330277 22330325 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11612 chr22 HAVANA UTR 22330082 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437929.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-013"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320261.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11613 chr22 HAVANA transcript 22326269 22337210 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11614 chr22 HAVANA exon 22337127 22337210 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; exon_number 1; exon_id "ENSE00001608483.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11615 chr22 HAVANA exon 22336811 22336846 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; exon_number 2; exon_id "ENSE00001768685.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11616 chr22 HAVANA exon 22330012 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; exon_number 3; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11617 chr22 HAVANA CDS 22330012 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; exon_number 3; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11618 chr22 HAVANA start_codon 22330079 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; exon_number 3; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11619 chr22 HAVANA exon 22328729 22328860 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; exon_number 4; exon_id "ENSE00003621283.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11620 chr22 HAVANA CDS 22328729 22328860 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; exon_number 4; exon_id "ENSE00003621283.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11621 chr22 HAVANA exon 22326984 22327090 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; exon_number 5; exon_id "ENSE00003681474.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11622 chr22 HAVANA CDS 22326984 22327090 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; exon_number 5; exon_id "ENSE00003681474.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11623 chr22 HAVANA exon 22326269 22326323 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; exon_number 6; exon_id "ENSE00001762654.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11624 chr22 HAVANA CDS 22326269 22326323 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; exon_number 6; exon_id "ENSE00001762654.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11625 chr22 HAVANA UTR 22337127 22337210 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11626 chr22 HAVANA UTR 22336811 22336846 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11627 chr22 HAVANA UTR 22330082 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000430142.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-007"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320255.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11628 chr22 HAVANA transcript 22326591 22330168 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000489581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TOP3B-015"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320263.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11629 chr22 HAVANA exon 22330012 22330168 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000489581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TOP3B-015"; exon_number 1; exon_id "ENSE00001892613.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320263.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11630 chr22 HAVANA exon 22328729 22328860 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000489581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TOP3B-015"; exon_number 2; exon_id "ENSE00003650160.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320263.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11631 chr22 HAVANA exon 22326591 22327090 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000489581.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TOP3B-015"; exon_number 3; exon_id "ENSE00001910422.1"; level 2; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320263.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11632 chr22 HAVANA transcript 22328748 22337163 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000456075.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11633 chr22 HAVANA exon 22337127 22337163 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000456075.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-009"; exon_number 1; exon_id "ENSE00001632656.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11634 chr22 HAVANA exon 22336811 22336846 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000456075.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-009"; exon_number 2; exon_id "ENSE00001768685.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11635 chr22 HAVANA exon 22330353 22330559 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000456075.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-009"; exon_number 3; exon_id "ENSE00001747034.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11636 chr22 HAVANA exon 22330012 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000456075.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-009"; exon_number 4; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11637 chr22 HAVANA CDS 22330012 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000456075.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-009"; exon_number 4; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11638 chr22 HAVANA start_codon 22330079 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000456075.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-009"; exon_number 4; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11639 chr22 HAVANA exon 22328748 22328860 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000456075.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-009"; exon_number 5; exon_id "ENSE00001730367.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11640 chr22 HAVANA CDS 22328748 22328860 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000456075.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-009"; exon_number 5; exon_id "ENSE00001730367.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11641 chr22 HAVANA UTR 22337127 22337163 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000456075.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11642 chr22 HAVANA UTR 22336811 22336846 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000456075.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11643 chr22 HAVANA UTR 22330353 22330559 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000456075.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11644 chr22 HAVANA UTR 22330082 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000456075.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320257.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11645 chr22 HAVANA transcript 22328751 22337184 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000449704.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320259.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11646 chr22 HAVANA exon 22337127 22337184 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000449704.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-011"; exon_number 1; exon_id "ENSE00001646255.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320259.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11647 chr22 HAVANA exon 22330353 22330559 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000449704.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-011"; exon_number 2; exon_id "ENSE00001747034.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320259.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11648 chr22 HAVANA exon 22330012 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000449704.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-011"; exon_number 3; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320259.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11649 chr22 HAVANA CDS 22330012 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000449704.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-011"; exon_number 3; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320259.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11650 chr22 HAVANA start_codon 22330079 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000449704.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-011"; exon_number 3; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320259.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11651 chr22 HAVANA exon 22328751 22328860 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000449704.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-011"; exon_number 4; exon_id "ENSE00001716821.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320259.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11652 chr22 HAVANA CDS 22328751 22328860 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000449704.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-011"; exon_number 4; exon_id "ENSE00001716821.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320259.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11653 chr22 HAVANA UTR 22337127 22337184 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000449704.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320259.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11654 chr22 HAVANA UTR 22330353 22330559 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000449704.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320259.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11655 chr22 HAVANA UTR 22330082 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000449704.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320259.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11656 chr22 HAVANA transcript 22328791 22330341 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000442653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-014"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320262.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11657 chr22 HAVANA exon 22330012 22330341 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000442653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-014"; exon_number 1; exon_id "ENSE00001692131.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320262.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11658 chr22 HAVANA CDS 22330012 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000442653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-014"; exon_number 1; exon_id "ENSE00001692131.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320262.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11659 chr22 HAVANA start_codon 22330079 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000442653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-014"; exon_number 1; exon_id "ENSE00001692131.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320262.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11660 chr22 HAVANA exon 22328791 22328860 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000442653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-014"; exon_number 2; exon_id "ENSE00001759305.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320262.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11661 chr22 HAVANA CDS 22328791 22328860 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000442653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-014"; exon_number 2; exon_id "ENSE00001759305.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320262.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11662 chr22 HAVANA UTR 22330082 22330341 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000442653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-014"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320262.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11663 chr22 HAVANA transcript 22328805 22337190 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-010"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320258.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11664 chr22 HAVANA exon 22337127 22337190 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-010"; exon_number 1; exon_id "ENSE00001550850.2"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320258.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11665 chr22 HAVANA exon 22330277 22330559 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-010"; exon_number 2; exon_id "ENSE00001697337.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320258.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11666 chr22 HAVANA exon 22330012 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-010"; exon_number 3; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320258.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11667 chr22 HAVANA CDS 22330012 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000437103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-010"; exon_number 3; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320258.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11668 chr22 HAVANA start_codon 22330079 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000437103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-010"; exon_number 3; exon_id "ENSE00003662250.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320258.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11669 chr22 HAVANA exon 22328805 22328860 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-010"; exon_number 4; exon_id "ENSE00001776229.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320258.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11670 chr22 HAVANA CDS 22328805 22328860 . - 2 gene_id "ENSG00000100038.15"; transcript_id "ENST00000437103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-010"; exon_number 4; exon_id "ENSE00001776229.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320258.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11671 chr22 HAVANA UTR 22337127 22337190 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-010"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320258.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11672 chr22 HAVANA UTR 22330277 22330559 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-010"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320258.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11673 chr22 HAVANA UTR 22330082 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000437103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-010"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320258.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11674 chr22 HAVANA transcript 22330018 22337170 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000434517.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-008"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320256.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11675 chr22 HAVANA exon 22336597 22337170 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000434517.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-008"; exon_number 1; exon_id "ENSE00001674676.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320256.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11676 chr22 HAVANA exon 22330018 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000434517.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-008"; exon_number 2; exon_id "ENSE00001609519.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320256.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11677 chr22 HAVANA CDS 22330018 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000434517.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-008"; exon_number 2; exon_id "ENSE00001609519.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320256.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11678 chr22 HAVANA start_codon 22330079 22330081 . - 0 gene_id "ENSG00000100038.15"; transcript_id "ENST00000434517.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-008"; exon_number 2; exon_id "ENSE00001609519.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320256.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11679 chr22 HAVANA UTR 22336597 22337170 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000434517.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-008"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320256.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11680 chr22 HAVANA UTR 22330082 22330179 . - . gene_id "ENSG00000100038.15"; transcript_id "ENST00000434517.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TOP3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TOP3B-008"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000167438.1"; havana_transcript "OTTHUMT00000320256.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11681 chr22 HAVANA gene 22345496 22398332 . - . gene_id "ENSG00000197549.5"; transcript_id "ENSG00000197549.5"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "PRAMENP"; level 1; havana_gene "OTTHUMG00000150836.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11682 chr22 HAVANA transcript 22345496 22398256 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000419303.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAMENP-002"; level 2; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000320277.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11683 chr22 HAVANA exon 22398080 22398256 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000419303.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAMENP-002"; exon_number 1; exon_id "ENSE00001632096.1"; level 2; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000320277.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11684 chr22 HAVANA exon 22380620 22380725 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000419303.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAMENP-002"; exon_number 2; exon_id "ENSE00003587960.1"; level 2; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000320277.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11685 chr22 HAVANA exon 22349530 22349829 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000419303.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAMENP-002"; exon_number 3; exon_id "ENSE00003578812.1"; level 2; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000320277.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11686 chr22 HAVANA exon 22348541 22349170 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000419303.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAMENP-002"; exon_number 4; exon_id "ENSE00001434222.2"; level 2; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000320277.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11687 chr22 HAVANA exon 22345496 22346151 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000419303.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAMENP-002"; exon_number 5; exon_id "ENSE00001706752.1"; level 2; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000320277.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11688 chr22 HAVANA transcript 22345497 22398332 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000337471.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAMENP-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000320276.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11689 chr22 HAVANA exon 22398080 22398332 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000337471.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAMENP-001"; exon_number 1; exon_id "ENSE00003566756.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000320276.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11690 chr22 HAVANA exon 22380620 22380725 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000337471.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAMENP-001"; exon_number 2; exon_id "ENSE00003587960.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000320276.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11691 chr22 HAVANA exon 22379571 22380527 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000337471.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAMENP-001"; exon_number 3; exon_id "ENSE00001432585.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000320276.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11692 chr22 HAVANA exon 22377692 22377828 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000337471.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAMENP-001"; exon_number 4; exon_id "ENSE00001427517.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000320276.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11693 chr22 HAVANA exon 22349530 22349829 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000337471.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAMENP-001"; exon_number 5; exon_id "ENSE00003578812.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000320276.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11694 chr22 HAVANA exon 22348541 22349170 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000337471.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAMENP-001"; exon_number 6; exon_id "ENSE00001434222.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000320276.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11695 chr22 HAVANA exon 22345497 22346151 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000337471.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAMENP-001"; exon_number 7; exon_id "ENSE00003506751.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000320276.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11696 chr22 ENSEMBL transcript 22345497 22398332 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000546598.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PRAMENP-201"; level 3; havana_gene "OTTHUMG00000150836.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11697 chr22 ENSEMBL exon 22398080 22398332 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000546598.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PRAMENP-201"; exon_number 1; exon_id "ENSE00003689213.1"; level 3; havana_gene "OTTHUMG00000150836.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11698 chr22 ENSEMBL exon 22380620 22380725 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000546598.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PRAMENP-201"; exon_number 2; exon_id "ENSE00003510477.1"; level 3; havana_gene "OTTHUMG00000150836.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11699 chr22 ENSEMBL exon 22349530 22349829 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000546598.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PRAMENP-201"; exon_number 3; exon_id "ENSE00003566714.1"; level 3; havana_gene "OTTHUMG00000150836.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11700 chr22 ENSEMBL exon 22349017 22349170 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000546598.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PRAMENP-201"; exon_number 4; exon_id "ENSE00002380155.1"; level 3; havana_gene "OTTHUMG00000150836.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11701 chr22 ENSEMBL exon 22348541 22348932 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000546598.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PRAMENP-201"; exon_number 5; exon_id "ENSE00002337559.1"; level 3; havana_gene "OTTHUMG00000150836.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11702 chr22 ENSEMBL exon 22345497 22346151 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000546598.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PRAMENP-201"; exon_number 6; exon_id "ENSE00003628113.1"; level 3; havana_gene "OTTHUMG00000150836.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11703 chr22 HAVANA transcript 22345633 22349825 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000548391.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PRAMENP-003"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000406528.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11704 chr22 HAVANA exon 22349530 22349825 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000548391.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PRAMENP-003"; exon_number 1; exon_id "ENSE00002393759.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000406528.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11705 chr22 HAVANA exon 22348541 22349170 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000548391.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PRAMENP-003"; exon_number 2; exon_id "ENSE00001434222.2"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000406528.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11706 chr22 HAVANA exon 22345633 22346151 . - . gene_id "ENSG00000197549.5"; transcript_id "ENST00000548391.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PRAMENP"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "PRAMENP-003"; exon_number 3; exon_id "ENSE00002364127.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150836.3"; havana_transcript "OTTHUMT00000406528.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11707 chr22 HAVANA gene 22380474 22380991 . + . gene_id "ENSG00000253239.1"; transcript_id "ENSG00000253239.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-70"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-70"; level 2; havana_gene "OTTHUMG00000150834.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11708 chr22 HAVANA transcript 22380474 22380991 . + . gene_id "ENSG00000253239.1"; transcript_id "ENST00000523272.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-70"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-70-001"; level 2; havana_gene "OTTHUMG00000150834.1"; havana_transcript "OTTHUMT00000320266.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11709 chr22 HAVANA exon 22380474 22380519 . + . gene_id "ENSG00000253239.1"; transcript_id "ENST00000523272.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-70"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-70-001"; exon_number 1; exon_id "ENSE00002127842.1"; level 2; havana_gene "OTTHUMG00000150834.1"; havana_transcript "OTTHUMT00000320266.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11710 chr22 HAVANA exon 22380648 22380991 . + . gene_id "ENSG00000253239.1"; transcript_id "ENST00000523272.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-70"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-70-001"; exon_number 2; exon_id "ENSE00002112986.1"; level 2; havana_gene "OTTHUMG00000150834.1"; havana_transcript "OTTHUMT00000320266.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11711 chr22 HAVANA gene 22385332 22385870 . + . gene_id "ENSG00000211637.2"; transcript_id "ENSG00000211637.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-69"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-69"; level 2; havana_gene "OTTHUMG00000150857.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11712 chr22 HAVANA transcript 22385332 22385870 . + . gene_id "ENSG00000211637.2"; transcript_id "ENST00000390282.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-69"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-69-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150857.1"; havana_transcript "OTTHUMT00000320334.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11713 chr22 HAVANA exon 22385332 22385440 . + . gene_id "ENSG00000211637.2"; transcript_id "ENST00000390282.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-69"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-69-001"; exon_number 1; exon_id "ENSE00001507748.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150857.1"; havana_transcript "OTTHUMT00000320334.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11714 chr22 HAVANA CDS 22385392 22385440 . + 0 gene_id "ENSG00000211637.2"; transcript_id "ENST00000390282.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-69"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-69-001"; exon_number 1; exon_id "ENSE00001507748.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150857.1"; havana_transcript "OTTHUMT00000320334.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11715 chr22 HAVANA start_codon 22385392 22385394 . + 0 gene_id "ENSG00000211637.2"; transcript_id "ENST00000390282.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-69"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-69-001"; exon_number 1; exon_id "ENSE00001507748.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150857.1"; havana_transcript "OTTHUMT00000320334.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11716 chr22 HAVANA exon 22385561 22385870 . + . gene_id "ENSG00000211637.2"; transcript_id "ENST00000390282.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-69"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-69-001"; exon_number 2; exon_id "ENSE00001507747.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150857.1"; havana_transcript "OTTHUMT00000320334.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11717 chr22 HAVANA CDS 22385561 22385870 . + 2 gene_id "ENSG00000211637.2"; transcript_id "ENST00000390282.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-69"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-69-001"; exon_number 2; exon_id "ENSE00001507747.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150857.1"; havana_transcript "OTTHUMT00000320334.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11718 chr22 HAVANA UTR 22385332 22385391 . + . gene_id "ENSG00000211637.2"; transcript_id "ENST00000390282.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-69"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-69-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150857.1"; havana_transcript "OTTHUMT00000320334.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11719 chr22 HAVANA gene 22387143 22387592 . + . gene_id "ENSG00000254355.1"; transcript_id "ENSG00000254355.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-68"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-68"; level 2; havana_gene "OTTHUMG00000150853.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11720 chr22 HAVANA transcript 22387143 22387592 . + . gene_id "ENSG00000254355.1"; transcript_id "ENST00000519525.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-68"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-68-001"; level 2; havana_gene "OTTHUMG00000150853.1"; havana_transcript "OTTHUMT00000320330.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11721 chr22 HAVANA exon 22387143 22387194 . + . gene_id "ENSG00000254355.1"; transcript_id "ENST00000519525.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-68"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-68-001"; exon_number 1; exon_id "ENSE00002140008.1"; level 2; havana_gene "OTTHUMG00000150853.1"; havana_transcript "OTTHUMT00000320330.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11722 chr22 HAVANA exon 22387300 22387592 . + . gene_id "ENSG00000254355.1"; transcript_id "ENST00000519525.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-68"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-68-001"; exon_number 2; exon_id "ENSE00002111778.1"; level 2; havana_gene "OTTHUMG00000150853.1"; havana_transcript "OTTHUMT00000320330.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11723 chr22 HAVANA gene 22390743 22394463 . + . gene_id "ENSG00000225070.1"; transcript_id "ENSG00000225070.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-23C6.13"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "LL22NC03-23C6.13"; level 2; havana_gene "OTTHUMG00000150859.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11724 chr22 HAVANA transcript 22390743 22394463 . + . gene_id "ENSG00000225070.1"; transcript_id "ENST00000411554.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-23C6.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LL22NC03-23C6.13-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150859.1"; havana_transcript "OTTHUMT00000320336.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11725 chr22 HAVANA exon 22390743 22390893 . + . gene_id "ENSG00000225070.1"; transcript_id "ENST00000411554.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-23C6.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LL22NC03-23C6.13-001"; exon_number 1; exon_id "ENSE00001805249.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150859.1"; havana_transcript "OTTHUMT00000320336.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11726 chr22 HAVANA exon 22393836 22394463 . + . gene_id "ENSG00000225070.1"; transcript_id "ENST00000411554.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-23C6.13"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LL22NC03-23C6.13-001"; exon_number 2; exon_id "ENSE00001653982.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150859.1"; havana_transcript "OTTHUMT00000320336.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11727 chr22 HAVANA gene 22393042 22393525 . + . gene_id "ENSG00000249333.1"; transcript_id "ENSG00000249333.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-23C6.12"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-23C6.12"; level 2; havana_gene "OTTHUMG00000150863.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11728 chr22 HAVANA transcript 22393042 22393525 . + . gene_id "ENSG00000249333.1"; transcript_id "ENST00000423821.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-23C6.12"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-23C6.12-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150863.1"; havana_transcript "OTTHUMT00000320340.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11729 chr22 HAVANA exon 22393042 22393087 . + . gene_id "ENSG00000249333.1"; transcript_id "ENST00000423821.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-23C6.12"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-23C6.12-001"; exon_number 1; exon_id "ENSE00001944304.2"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150863.1"; havana_transcript "OTTHUMT00000320340.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11730 chr22 HAVANA exon 22393197 22393525 . + . gene_id "ENSG00000249333.1"; transcript_id "ENST00000423821.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-23C6.12"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-23C6.12-001"; exon_number 2; exon_id "ENSE00002025865.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150863.1"; havana_transcript "OTTHUMT00000320340.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11731 chr22 HAVANA gene 22398016 22398340 . + . gene_id "ENSG00000253794.1"; transcript_id "ENSG00000253794.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV10-67"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV10-67"; level 2; havana_gene "OTTHUMG00000150849.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11732 chr22 HAVANA transcript 22398016 22398340 . + . gene_id "ENSG00000253794.1"; transcript_id "ENST00000519446.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV10-67"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV10-67-001"; level 2; havana_gene "OTTHUMG00000150849.1"; havana_transcript "OTTHUMT00000320326.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11733 chr22 HAVANA exon 22398016 22398340 . + . gene_id "ENSG00000253794.1"; transcript_id "ENST00000519446.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV10-67"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV10-67-001"; exon_number 1; exon_id "ENSE00002135003.1"; level 2; havana_gene "OTTHUMG00000150849.1"; havana_transcript "OTTHUMT00000320326.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11734 chr22 HAVANA gene 22400828 22400989 . + . gene_id "ENSG00000228161.1"; transcript_id "ENSG00000228161.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-23C6.15"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-23C6.15"; level 2; havana_gene "OTTHUMG00000150860.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11735 chr22 HAVANA transcript 22400828 22400989 . + . gene_id "ENSG00000228161.1"; transcript_id "ENST00000413294.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-23C6.15"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-23C6.15-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150860.1"; havana_transcript "OTTHUMT00000320337.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11736 chr22 HAVANA exon 22400828 22400989 . + . gene_id "ENSG00000228161.1"; transcript_id "ENST00000413294.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-23C6.15"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-23C6.15-001"; exon_number 1; exon_id "ENSE00001722783.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150860.1"; havana_transcript "OTTHUMT00000320337.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11737 chr22 HAVANA gene 22412845 22413304 . + . gene_id "ENSG00000253874.1"; transcript_id "ENSG00000253874.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-66-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-66-1"; level 2; havana_gene "OTTHUMG00000150862.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11738 chr22 HAVANA transcript 22412845 22413304 . + . gene_id "ENSG00000253874.1"; transcript_id "ENST00000521832.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-66-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-66-1-001"; level 2; havana_gene "OTTHUMG00000150862.1"; havana_transcript "OTTHUMT00000320339.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11739 chr22 HAVANA exon 22412845 22413304 . + . gene_id "ENSG00000253874.1"; transcript_id "ENST00000521832.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-66-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-66-1-001"; exon_number 1; exon_id "ENSE00002134780.1"; level 2; havana_gene "OTTHUMG00000150862.1"; havana_transcript "OTTHUMT00000320339.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11740 chr22 HAVANA gene 22415489 22415950 . + . gene_id "ENSG00000254075.1"; transcript_id "ENSG00000254075.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVV-66"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVV-66"; level 2; havana_gene "OTTHUMG00000151584.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11741 chr22 HAVANA transcript 22415489 22415950 . + . gene_id "ENSG00000254075.1"; transcript_id "ENST00000523818.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVV-66"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVV-66-001"; level 2; havana_gene "OTTHUMG00000151584.1"; havana_transcript "OTTHUMT00000323194.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11742 chr22 HAVANA exon 22415489 22415536 . + . gene_id "ENSG00000254075.1"; transcript_id "ENST00000523818.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVV-66"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVV-66-001"; exon_number 1; exon_id "ENSE00002121487.1"; level 2; havana_gene "OTTHUMG00000151584.1"; havana_transcript "OTTHUMT00000323194.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11743 chr22 HAVANA exon 22415658 22415950 . + . gene_id "ENSG00000254075.1"; transcript_id "ENST00000523818.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVV-66"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVV-66-001"; exon_number 2; exon_id "ENSE00002133365.1"; level 2; havana_gene "OTTHUMG00000151584.1"; havana_transcript "OTTHUMT00000323194.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11744 chr22 HAVANA gene 22424636 22425118 . + . gene_id "ENSG00000254161.1"; transcript_id "ENSG00000254161.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-65"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-65"; level 2; havana_gene "OTTHUMG00000150861.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11745 chr22 HAVANA transcript 22424636 22425118 . + . gene_id "ENSG00000254161.1"; transcript_id "ENST00000517313.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-65"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-65-001"; level 2; havana_gene "OTTHUMG00000150861.1"; havana_transcript "OTTHUMT00000320338.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11746 chr22 HAVANA exon 22424636 22424681 . + . gene_id "ENSG00000254161.1"; transcript_id "ENST00000517313.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-65"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-65-001"; exon_number 1; exon_id "ENSE00002133711.1"; level 2; havana_gene "OTTHUMG00000150861.1"; havana_transcript "OTTHUMT00000320338.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11747 chr22 HAVANA exon 22424805 22425118 . + . gene_id "ENSG00000254161.1"; transcript_id "ENST00000517313.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-65"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-65-001"; exon_number 2; exon_id "ENSE00002139371.1"; level 2; havana_gene "OTTHUMG00000150861.1"; havana_transcript "OTTHUMT00000320338.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11748 chr22 HAVANA gene 22429777 22430077 . + . gene_id "ENSG00000253242.1"; transcript_id "ENSG00000253242.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-64"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-64"; level 2; havana_gene "OTTHUMG00000150852.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11749 chr22 HAVANA transcript 22429777 22430077 . + . gene_id "ENSG00000253242.1"; transcript_id "ENST00000518581.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-64"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-64-001"; level 2; havana_gene "OTTHUMG00000150852.1"; havana_transcript "OTTHUMT00000320329.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11750 chr22 HAVANA exon 22429777 22430077 . + . gene_id "ENSG00000253242.1"; transcript_id "ENST00000518581.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-64"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-64-001"; exon_number 1; exon_id "ENSE00002103626.1"; level 2; havana_gene "OTTHUMG00000150852.1"; havana_transcript "OTTHUMT00000320329.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11751 chr22 HAVANA gene 22434180 22434673 . + . gene_id "ENSG00000253752.1"; transcript_id "ENSG00000253752.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-63"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-63"; level 2; havana_gene "OTTHUMG00000150855.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11752 chr22 HAVANA transcript 22434180 22434673 . + . gene_id "ENSG00000253752.1"; transcript_id "ENST00000524184.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-63"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-63-001"; level 2; havana_gene "OTTHUMG00000150855.1"; havana_transcript "OTTHUMT00000320332.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11753 chr22 HAVANA exon 22434180 22434225 . + . gene_id "ENSG00000253752.1"; transcript_id "ENST00000524184.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-63"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-63-001"; exon_number 1; exon_id "ENSE00002107155.1"; level 2; havana_gene "OTTHUMG00000150855.1"; havana_transcript "OTTHUMT00000320332.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11754 chr22 HAVANA exon 22434336 22434673 . + . gene_id "ENSG00000253752.1"; transcript_id "ENST00000524184.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-63"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-63-001"; exon_number 2; exon_id "ENSE00002102651.1"; level 2; havana_gene "OTTHUMG00000150855.1"; havana_transcript "OTTHUMT00000320332.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11755 chr22 HAVANA gene 22440972 22441521 . + . gene_id "ENSG00000253823.1"; transcript_id "ENSG00000253823.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV1-62"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV1-62"; level 2; havana_gene "OTTHUMG00000150848.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11756 chr22 HAVANA transcript 22440972 22441521 . + . gene_id "ENSG00000253823.1"; transcript_id "ENST00000518003.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV1-62"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV1-62-001"; level 2; havana_gene "OTTHUMG00000150848.1"; havana_transcript "OTTHUMT00000320325.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11757 chr22 HAVANA exon 22440972 22441017 . + . gene_id "ENSG00000253823.1"; transcript_id "ENST00000518003.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV1-62"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV1-62-001"; exon_number 1; exon_id "ENSE00002100107.1"; level 2; havana_gene "OTTHUMG00000150848.1"; havana_transcript "OTTHUMT00000320325.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11758 chr22 HAVANA exon 22441127 22441521 . + . gene_id "ENSG00000253823.1"; transcript_id "ENST00000518003.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV1-62"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV1-62-001"; exon_number 2; exon_id "ENSE00002116176.1"; level 2; havana_gene "OTTHUMG00000150848.1"; havana_transcript "OTTHUMT00000320325.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11759 chr22 HAVANA gene 22453110 22453622 . + . gene_id "ENSG00000211638.2"; transcript_id "ENSG00000211638.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV8-61"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV8-61"; level 2; havana_gene "OTTHUMG00000150844.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11760 chr22 HAVANA transcript 22453110 22453622 . + . gene_id "ENSG00000211638.2"; transcript_id "ENST00000390283.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV8-61"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV8-61-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150844.1"; havana_transcript "OTTHUMT00000320321.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11761 chr22 HAVANA exon 22453110 22453216 . + . gene_id "ENSG00000211638.2"; transcript_id "ENST00000390283.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV8-61"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV8-61-001"; exon_number 1; exon_id "ENSE00001627108.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150844.1"; havana_transcript "OTTHUMT00000320321.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11762 chr22 HAVANA CDS 22453156 22453216 . + 0 gene_id "ENSG00000211638.2"; transcript_id "ENST00000390283.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV8-61"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV8-61-001"; exon_number 1; exon_id "ENSE00001627108.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150844.1"; havana_transcript "OTTHUMT00000320321.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11763 chr22 HAVANA start_codon 22453156 22453158 . + 0 gene_id "ENSG00000211638.2"; transcript_id "ENST00000390283.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV8-61"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV8-61-001"; exon_number 1; exon_id "ENSE00001627108.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150844.1"; havana_transcript "OTTHUMT00000320321.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11764 chr22 HAVANA exon 22453316 22453622 . + . gene_id "ENSG00000211638.2"; transcript_id "ENST00000390283.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV8-61"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV8-61-001"; exon_number 2; exon_id "ENSE00001507750.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150844.1"; havana_transcript "OTTHUMT00000320321.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11765 chr22 HAVANA CDS 22453316 22453622 . + 2 gene_id "ENSG00000211638.2"; transcript_id "ENST00000390283.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV8-61"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV8-61-001"; exon_number 2; exon_id "ENSE00001507750.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150844.1"; havana_transcript "OTTHUMT00000320321.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11766 chr22 HAVANA UTR 22453110 22453155 . + . gene_id "ENSG00000211638.2"; transcript_id "ENST00000390283.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV8-61"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV8-61-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150844.1"; havana_transcript "OTTHUMT00000320321.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11767 chr22 HAVANA gene 22457629 22459267 . + . gene_id "ENSG00000225741.1"; transcript_id "ENSG00000225741.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-88E1.17"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-88E1.17"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150843.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11768 chr22 HAVANA transcript 22457629 22459267 . + . gene_id "ENSG00000225741.1"; transcript_id "ENST00000444224.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-88E1.17"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-88E1.17-001"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150843.1"; havana_transcript "OTTHUMT00000320320.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11769 chr22 HAVANA exon 22457629 22458457 . + . gene_id "ENSG00000225741.1"; transcript_id "ENST00000444224.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-88E1.17"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-88E1.17-001"; exon_number 1; exon_id "ENSE00001793110.1"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150843.1"; havana_transcript "OTTHUMT00000320320.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11770 chr22 HAVANA exon 22458835 22459267 . + . gene_id "ENSG00000225741.1"; transcript_id "ENST00000444224.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-88E1.17"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-88E1.17-001"; exon_number 2; exon_id "ENSE00001701632.1"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150843.1"; havana_transcript "OTTHUMT00000320320.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11771 chr22 HAVANA gene 22469236 22472374 . - . gene_id "ENSG00000182502.2"; transcript_id "ENSG00000182502.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABHD17AP5"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "ABHD17AP5"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150850.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11772 chr22 HAVANA transcript 22469236 22472374 . - . gene_id "ENSG00000182502.2"; transcript_id "ENST00000333131.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABHD17AP5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ABHD17AP5-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150850.1"; havana_transcript "OTTHUMT00000320327.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11773 chr22 HAVANA exon 22471878 22472374 . - . gene_id "ENSG00000182502.2"; transcript_id "ENST00000333131.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABHD17AP5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ABHD17AP5-001"; exon_number 1; exon_id "ENSE00001312736.2"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150850.1"; havana_transcript "OTTHUMT00000320327.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11774 chr22 HAVANA exon 22469236 22469638 . - . gene_id "ENSG00000182502.2"; transcript_id "ENST00000333131.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABHD17AP5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ABHD17AP5-001"; exon_number 2; exon_id "ENSE00001708671.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150850.1"; havana_transcript "OTTHUMT00000320327.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11775 chr22 HAVANA gene 22509975 22510335 . + . gene_id "ENSG00000236118.1"; transcript_id "ENSG00000236118.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-30E12.10"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-30E12.10"; level 2; havana_gene "OTTHUMG00000150845.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11776 chr22 HAVANA transcript 22509975 22510335 . + . gene_id "ENSG00000236118.1"; transcript_id "ENST00000448601.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-30E12.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-30E12.10-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150845.2"; havana_transcript "OTTHUMT00000320322.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11777 chr22 HAVANA exon 22509975 22510104 . + . gene_id "ENSG00000236118.1"; transcript_id "ENST00000448601.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-30E12.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-30E12.10-001"; exon_number 1; exon_id "ENSE00001641491.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150845.2"; havana_transcript "OTTHUMT00000320322.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11778 chr22 HAVANA exon 22510185 22510335 . + . gene_id "ENSG00000236118.1"; transcript_id "ENST00000448601.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-30E12.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-30E12.10-001"; exon_number 2; exon_id "ENSE00001633902.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150845.2"; havana_transcript "OTTHUMT00000320322.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11779 chr22 HAVANA gene 22511775 22512024 . + . gene_id "ENSG00000233720.1"; transcript_id "ENSG00000233720.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-30E12.11"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-30E12.11"; level 2; havana_gene "OTTHUMG00000150856.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11780 chr22 HAVANA transcript 22511775 22512024 . + . gene_id "ENSG00000233720.1"; transcript_id "ENST00000440562.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-30E12.11"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-30E12.11-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150856.2"; havana_transcript "OTTHUMT00000320333.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11781 chr22 HAVANA exon 22511775 22512024 . + . gene_id "ENSG00000233720.1"; transcript_id "ENST00000440562.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-30E12.11"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-30E12.11-001"; exon_number 1; exon_id "ENSE00001635795.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150856.2"; havana_transcript "OTTHUMT00000320333.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11782 chr22 HAVANA gene 22516592 22517074 . + . gene_id "ENSG00000211639.2"; transcript_id "ENSG00000211639.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-60"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-60"; level 2; havana_gene "OTTHUMG00000150851.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11783 chr22 HAVANA transcript 22516592 22517074 . + . gene_id "ENSG00000211639.2"; transcript_id "ENST00000390284.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-60"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-60-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150851.1"; havana_transcript "OTTHUMT00000320328.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11784 chr22 HAVANA exon 22516592 22516643 . + . gene_id "ENSG00000211639.2"; transcript_id "ENST00000390284.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-60"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-60-001"; exon_number 1; exon_id "ENSE00001507752.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150851.1"; havana_transcript "OTTHUMT00000320328.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11785 chr22 HAVANA CDS 22516592 22516643 . + 0 gene_id "ENSG00000211639.2"; transcript_id "ENST00000390284.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-60"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-60-001"; exon_number 1; exon_id "ENSE00001507752.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150851.1"; havana_transcript "OTTHUMT00000320328.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11786 chr22 HAVANA start_codon 22516592 22516594 . + 0 gene_id "ENSG00000211639.2"; transcript_id "ENST00000390284.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-60"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-60-001"; exon_number 1; exon_id "ENSE00001507752.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150851.1"; havana_transcript "OTTHUMT00000320328.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11787 chr22 HAVANA exon 22516765 22517074 . + . gene_id "ENSG00000211639.2"; transcript_id "ENST00000390284.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-60"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-60-001"; exon_number 2; exon_id "ENSE00001507751.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150851.1"; havana_transcript "OTTHUMT00000320328.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11788 chr22 HAVANA CDS 22516765 22517074 . + 2 gene_id "ENSG00000211639.2"; transcript_id "ENST00000390284.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-60"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-60-001"; exon_number 2; exon_id "ENSE00001507751.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150851.1"; havana_transcript "OTTHUMT00000320328.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11789 chr22 HAVANA gene 22522682 22523027 . + . gene_id "ENSG00000227710.1"; transcript_id "ENSG00000227710.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-30E12.13"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-30E12.13"; level 2; havana_gene "OTTHUMG00000150858.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11790 chr22 HAVANA transcript 22522682 22523027 . + . gene_id "ENSG00000227710.1"; transcript_id "ENST00000442890.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-30E12.13"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-30E12.13-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150858.1"; havana_transcript "OTTHUMT00000320335.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11791 chr22 HAVANA exon 22522682 22523027 . + . gene_id "ENSG00000227710.1"; transcript_id "ENST00000442890.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-30E12.13"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-30E12.13-001"; exon_number 1; exon_id "ENSE00001704850.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150858.1"; havana_transcript "OTTHUMT00000320335.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11792 chr22 HAVANA gene 22525369 22525942 . - . gene_id "ENSG00000224465.1"; transcript_id "ENSG00000224465.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SOCS2P2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "SOCS2P2"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150854.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11793 chr22 HAVANA transcript 22525369 22525942 . - . gene_id "ENSG00000224465.1"; transcript_id "ENST00000458366.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SOCS2P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "SOCS2P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150854.1"; havana_transcript "OTTHUMT00000320331.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11794 chr22 HAVANA exon 22525369 22525942 . - . gene_id "ENSG00000224465.1"; transcript_id "ENST00000458366.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SOCS2P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "SOCS2P2-001"; exon_number 1; exon_id "ENSE00001737831.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150854.1"; havana_transcript "OTTHUMT00000320331.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11795 chr22 HAVANA gene 22533618 22533867 . + . gene_id "ENSG00000254308.1"; transcript_id "ENSG00000254308.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-59"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-59"; level 2; havana_gene "OTTHUMG00000150847.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11796 chr22 HAVANA transcript 22533618 22533867 . + . gene_id "ENSG00000254308.1"; transcript_id "ENST00000520218.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-59"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-59-001"; level 2; havana_gene "OTTHUMG00000150847.1"; havana_transcript "OTTHUMT00000320324.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11797 chr22 HAVANA exon 22533618 22533867 . + . gene_id "ENSG00000254308.1"; transcript_id "ENST00000520218.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-59"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-59-001"; exon_number 1; exon_id "ENSE00002131171.1"; level 2; havana_gene "OTTHUMG00000150847.1"; havana_transcript "OTTHUMT00000320324.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11798 chr22 HAVANA gene 22536972 22537275 . + . gene_id "ENSG00000253637.1"; transcript_id "ENSG00000253637.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVV-58"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVV-58"; level 2; havana_gene "OTTHUMG00000150893.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11799 chr22 HAVANA transcript 22536972 22537275 . + . gene_id "ENSG00000253637.1"; transcript_id "ENST00000520445.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVV-58"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVV-58-001"; level 2; havana_gene "OTTHUMG00000150893.1"; havana_transcript "OTTHUMT00000320461.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11800 chr22 HAVANA exon 22536972 22537275 . + . gene_id "ENSG00000253637.1"; transcript_id "ENST00000520445.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVV-58"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVV-58-001"; exon_number 1; exon_id "ENSE00002107679.1"; level 2; havana_gene "OTTHUMG00000150893.1"; havana_transcript "OTTHUMT00000320461.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11801 chr22 HAVANA gene 22540331 22541009 . + . gene_id "ENSG00000236323.1"; transcript_id "ENSG00000236323.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BMP6P1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "BMP6P1"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150994.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11802 chr22 HAVANA transcript 22540331 22541009 . + . gene_id "ENSG00000236323.1"; transcript_id "ENST00000431230.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BMP6P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "BMP6P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150994.1"; havana_transcript "OTTHUMT00000320859.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11803 chr22 HAVANA exon 22540331 22541009 . + . gene_id "ENSG00000236323.1"; transcript_id "ENST00000431230.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BMP6P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "BMP6P1-001"; exon_number 1; exon_id "ENSE00001663639.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150994.1"; havana_transcript "OTTHUMT00000320859.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11804 chr22 HAVANA gene 22550113 22550860 . + . gene_id "ENSG00000211640.3"; transcript_id "ENSG00000211640.3"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV6-57"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV6-57"; level 2; havana_gene "OTTHUMG00000150996.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11805 chr22 HAVANA transcript 22550113 22550860 . + . gene_id "ENSG00000211640.3"; transcript_id "ENST00000390285.3"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV6-57"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV6-57-001"; level 2; tag "mRNA_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150996.3"; havana_transcript "OTTHUMT00000320861.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11806 chr22 HAVANA exon 22550113 22550244 . + . gene_id "ENSG00000211640.3"; transcript_id "ENST00000390285.3"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV6-57"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV6-57-001"; exon_number 1; exon_id "ENSE00001814234.1"; level 2; tag "mRNA_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150996.3"; havana_transcript "OTTHUMT00000320861.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11807 chr22 HAVANA CDS 22550199 22550244 . + 0 gene_id "ENSG00000211640.3"; transcript_id "ENST00000390285.3"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV6-57"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV6-57-001"; exon_number 1; exon_id "ENSE00001814234.1"; level 2; tag "mRNA_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150996.3"; havana_transcript "OTTHUMT00000320861.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11808 chr22 HAVANA start_codon 22550199 22550201 . + 0 gene_id "ENSG00000211640.3"; transcript_id "ENST00000390285.3"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV6-57"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV6-57-001"; exon_number 1; exon_id "ENSE00001814234.1"; level 2; tag "mRNA_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150996.3"; havana_transcript "OTTHUMT00000320861.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11809 chr22 HAVANA exon 22550370 22550860 . + . gene_id "ENSG00000211640.3"; transcript_id "ENST00000390285.3"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV6-57"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV6-57-001"; exon_number 2; exon_id "ENSE00001507753.3"; level 2; tag "mRNA_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150996.3"; havana_transcript "OTTHUMT00000320861.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11810 chr22 HAVANA CDS 22550370 22550767 . + 2 gene_id "ENSG00000211640.3"; transcript_id "ENST00000390285.3"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV6-57"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV6-57-001"; exon_number 2; exon_id "ENSE00001507753.3"; level 2; tag "mRNA_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150996.3"; havana_transcript "OTTHUMT00000320861.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11811 chr22 HAVANA stop_codon 22550768 22550770 . + 0 gene_id "ENSG00000211640.3"; transcript_id "ENST00000390285.3"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV6-57"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV6-57-001"; exon_number 2; exon_id "ENSE00001507753.3"; level 2; tag "mRNA_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150996.3"; havana_transcript "OTTHUMT00000320861.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11812 chr22 HAVANA UTR 22550113 22550198 . + . gene_id "ENSG00000211640.3"; transcript_id "ENST00000390285.3"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV6-57"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV6-57-001"; level 2; tag "mRNA_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150996.3"; havana_transcript "OTTHUMT00000320861.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11813 chr22 HAVANA UTR 22550768 22550860 . + . gene_id "ENSG00000211640.3"; transcript_id "ENST00000390285.3"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV6-57"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV6-57-001"; level 2; tag "mRNA_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150996.3"; havana_transcript "OTTHUMT00000320861.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11814 chr22 HAVANA gene 22552960 22553411 . + . gene_id "ENSG00000253126.1"; transcript_id "ENSG00000253126.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-56"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-56"; level 2; havana_gene "OTTHUMG00000151583.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11815 chr22 HAVANA transcript 22552960 22553411 . + . gene_id "ENSG00000253126.1"; transcript_id "ENST00000521342.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-56"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-56-001"; level 2; havana_gene "OTTHUMG00000151583.1"; havana_transcript "OTTHUMT00000323193.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11816 chr22 HAVANA exon 22552960 22553004 . + . gene_id "ENSG00000253126.1"; transcript_id "ENST00000521342.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-56"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-56-001"; exon_number 1; exon_id "ENSE00002128335.1"; level 2; havana_gene "OTTHUMG00000151583.1"; havana_transcript "OTTHUMT00000323193.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11817 chr22 HAVANA exon 22553115 22553411 . + . gene_id "ENSG00000253126.1"; transcript_id "ENST00000521342.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-56"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-56-001"; exon_number 2; exon_id "ENSE00002125813.1"; level 2; havana_gene "OTTHUMG00000151583.1"; havana_transcript "OTTHUMT00000323193.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11818 chr22 HAVANA gene 22556057 22556600 . + . gene_id "ENSG00000211641.2"; transcript_id "ENSG00000211641.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV11-55"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV11-55"; level 2; havana_gene "OTTHUMG00000150995.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11819 chr22 HAVANA transcript 22556057 22556600 . + . gene_id "ENSG00000211641.2"; transcript_id "ENST00000390286.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV11-55"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV11-55-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150995.3"; havana_transcript "OTTHUMT00000320860.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11820 chr22 HAVANA exon 22556057 22556114 . + . gene_id "ENSG00000211641.2"; transcript_id "ENST00000390286.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV11-55"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV11-55-001"; exon_number 1; exon_id "ENSE00001876713.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150995.3"; havana_transcript "OTTHUMT00000320860.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11821 chr22 HAVANA CDS 22556069 22556114 . + 0 gene_id "ENSG00000211641.2"; transcript_id "ENST00000390286.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV11-55"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV11-55-001"; exon_number 1; exon_id "ENSE00001876713.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150995.3"; havana_transcript "OTTHUMT00000320860.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11822 chr22 HAVANA start_codon 22556069 22556071 . + 0 gene_id "ENSG00000211641.2"; transcript_id "ENST00000390286.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV11-55"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV11-55-001"; exon_number 1; exon_id "ENSE00001876713.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150995.3"; havana_transcript "OTTHUMT00000320860.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11823 chr22 HAVANA exon 22556233 22556600 . + . gene_id "ENSG00000211641.2"; transcript_id "ENST00000390286.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV11-55"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV11-55-001"; exon_number 2; exon_id "ENSE00001507755.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150995.3"; havana_transcript "OTTHUMT00000320860.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11824 chr22 HAVANA CDS 22556233 22556597 . + 2 gene_id "ENSG00000211641.2"; transcript_id "ENST00000390286.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV11-55"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV11-55-001"; exon_number 2; exon_id "ENSE00001507755.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150995.3"; havana_transcript "OTTHUMT00000320860.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11825 chr22 HAVANA stop_codon 22556598 22556600 . + 0 gene_id "ENSG00000211641.2"; transcript_id "ENST00000390286.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV11-55"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV11-55-001"; exon_number 2; exon_id "ENSE00001507755.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150995.3"; havana_transcript "OTTHUMT00000320860.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11826 chr22 HAVANA UTR 22556057 22556068 . + . gene_id "ENSG00000211641.2"; transcript_id "ENST00000390286.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV11-55"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV11-55-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150995.3"; havana_transcript "OTTHUMT00000320860.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11827 chr22 HAVANA UTR 22556598 22556600 . + . gene_id "ENSG00000211641.2"; transcript_id "ENST00000390286.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV11-55"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV11-55-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150995.3"; havana_transcript "OTTHUMT00000320860.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11828 chr22 HAVANA gene 22569184 22569660 . + . gene_id "ENSG00000211642.2"; transcript_id "ENSG00000211642.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV10-54"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV10-54"; level 2; havana_gene "OTTHUMG00000150993.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11829 chr22 HAVANA transcript 22569184 22569660 . + . gene_id "ENSG00000211642.2"; transcript_id "ENST00000390287.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV10-54"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV10-54-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150993.1"; havana_transcript "OTTHUMT00000320858.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11830 chr22 HAVANA exon 22569184 22569242 . + . gene_id "ENSG00000211642.2"; transcript_id "ENST00000390287.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV10-54"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV10-54-001"; exon_number 1; exon_id "ENSE00001872343.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150993.1"; havana_transcript "OTTHUMT00000320858.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11831 chr22 HAVANA CDS 22569197 22569242 . + 0 gene_id "ENSG00000211642.2"; transcript_id "ENST00000390287.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV10-54"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV10-54-001"; exon_number 1; exon_id "ENSE00001872343.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150993.1"; havana_transcript "OTTHUMT00000320858.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11832 chr22 HAVANA start_codon 22569197 22569199 . + 0 gene_id "ENSG00000211642.2"; transcript_id "ENST00000390287.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV10-54"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV10-54-001"; exon_number 1; exon_id "ENSE00001872343.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150993.1"; havana_transcript "OTTHUMT00000320858.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11833 chr22 HAVANA exon 22569355 22569660 . + . gene_id "ENSG00000211642.2"; transcript_id "ENST00000390287.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV10-54"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV10-54-001"; exon_number 2; exon_id "ENSE00001507758.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150993.1"; havana_transcript "OTTHUMT00000320858.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11834 chr22 HAVANA CDS 22569355 22569660 . + 2 gene_id "ENSG00000211642.2"; transcript_id "ENST00000390287.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV10-54"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV10-54-001"; exon_number 2; exon_id "ENSE00001507758.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150993.1"; havana_transcript "OTTHUMT00000320858.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11835 chr22 HAVANA UTR 22569184 22569196 . + . gene_id "ENSG00000211642.2"; transcript_id "ENST00000390287.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV10-54"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV10-54-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150993.1"; havana_transcript "OTTHUMT00000320858.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11836 chr22 HAVANA gene 22574039 22574525 . + . gene_id "ENSG00000253935.1"; transcript_id "ENSG00000253935.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-53"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-53"; level 2; havana_gene "OTTHUMG00000151585.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11837 chr22 HAVANA transcript 22574039 22574525 . + . gene_id "ENSG00000253935.1"; transcript_id "ENST00000520107.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-53"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-53-001"; level 2; havana_gene "OTTHUMG00000151585.1"; havana_transcript "OTTHUMT00000323195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11838 chr22 HAVANA exon 22574039 22574081 . + . gene_id "ENSG00000253935.1"; transcript_id "ENST00000520107.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-53"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-53-001"; exon_number 1; exon_id "ENSE00002131111.1"; level 2; havana_gene "OTTHUMG00000151585.1"; havana_transcript "OTTHUMT00000323195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11839 chr22 HAVANA exon 22574202 22574525 . + . gene_id "ENSG00000253935.1"; transcript_id "ENST00000520107.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVIV-53"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVIV-53-001"; exon_number 2; exon_id "ENSE00002096153.1"; level 2; havana_gene "OTTHUMG00000151585.1"; havana_transcript "OTTHUMT00000323195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11840 chr22 HAVANA gene 22577580 22578959 . - . gene_id "ENSG00000228050.1"; transcript_id "ENSG00000228050.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TOP3BP1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "TOP3BP1"; level 2; havana_gene "OTTHUMG00000151044.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11841 chr22 HAVANA transcript 22577580 22578959 . - . gene_id "ENSG00000228050.1"; transcript_id "ENST00000420768.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TOP3BP1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "TOP3BP1-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000151044.1"; havana_transcript "OTTHUMT00000321104.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11842 chr22 HAVANA exon 22577580 22578959 . - . gene_id "ENSG00000228050.1"; transcript_id "ENST00000420768.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TOP3BP1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "TOP3BP1-001"; exon_number 1; exon_id "ENSE00001622984.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000151044.1"; havana_transcript "OTTHUMT00000321104.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11843 chr22 HAVANA gene 22583115 22584865 . - . gene_id "ENSG00000234726.1"; transcript_id "ENSG00000234726.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-123E1.5"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-123E1.5"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000155637.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11844 chr22 HAVANA transcript 22583115 22584865 . - . gene_id "ENSG00000234726.1"; transcript_id "ENST00000432623.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-123E1.5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-123E1.5-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155637.1"; havana_transcript "OTTHUMT00000340934.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11845 chr22 HAVANA exon 22584231 22584865 . - . gene_id "ENSG00000234726.1"; transcript_id "ENST00000432623.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-123E1.5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-123E1.5-001"; exon_number 1; exon_id "ENSE00001612833.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155637.1"; havana_transcript "OTTHUMT00000340934.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11846 chr22 HAVANA exon 22583115 22583721 . - . gene_id "ENSG00000234726.1"; transcript_id "ENST00000432623.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-123E1.5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-123E1.5-001"; exon_number 2; exon_id "ENSE00001604169.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155637.1"; havana_transcript "OTTHUMT00000340934.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11847 chr22 HAVANA gene 22599087 22599927 . + . gene_id "ENSG00000169575.4"; transcript_id "ENSG00000169575.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB1"; level 2; havana_gene "OTTHUMG00000151042.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11848 chr22 HAVANA transcript 22599087 22599927 . + . gene_id "ENSG00000169575.4"; transcript_id "ENST00000403807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13798.1"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11849 chr22 HAVANA exon 22599087 22599271 . + . gene_id "ENSG00000169575.4"; transcript_id "ENST00000403807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB1-001"; exon_number 1; exon_id "ENSE00001819717.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13798.1"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11850 chr22 HAVANA CDS 22599226 22599271 . + 0 gene_id "ENSG00000169575.4"; transcript_id "ENST00000403807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB1-001"; exon_number 1; exon_id "ENSE00001819717.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13798.1"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11851 chr22 HAVANA start_codon 22599226 22599228 . + 0 gene_id "ENSG00000169575.4"; transcript_id "ENST00000403807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB1-001"; exon_number 1; exon_id "ENSE00001819717.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13798.1"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11852 chr22 HAVANA exon 22599358 22599927 . + . gene_id "ENSG00000169575.4"; transcript_id "ENST00000403807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB1-001"; exon_number 2; exon_id "ENSE00001135667.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13798.1"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11853 chr22 HAVANA CDS 22599358 22599746 . + 2 gene_id "ENSG00000169575.4"; transcript_id "ENST00000403807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB1-001"; exon_number 2; exon_id "ENSE00001135667.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13798.1"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11854 chr22 HAVANA stop_codon 22599747 22599749 . + 0 gene_id "ENSG00000169575.4"; transcript_id "ENST00000403807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB1-001"; exon_number 2; exon_id "ENSE00001135667.4"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13798.1"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11855 chr22 HAVANA UTR 22599087 22599225 . + . gene_id "ENSG00000169575.4"; transcript_id "ENST00000403807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13798.1"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11856 chr22 HAVANA UTR 22599747 22599927 . + . gene_id "ENSG00000169575.4"; transcript_id "ENST00000403807.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13798.1"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321101.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11857 chr22 HAVANA transcript 22599192 22599917 . + . gene_id "ENSG00000169575.4"; transcript_id "ENST00000302273.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11858 chr22 HAVANA exon 22599192 22599271 . + . gene_id "ENSG00000169575.4"; transcript_id "ENST00000302273.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB1-002"; exon_number 1; exon_id "ENSE00001863658.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11859 chr22 HAVANA CDS 22599215 22599271 . + 0 gene_id "ENSG00000169575.4"; transcript_id "ENST00000302273.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB1-002"; exon_number 1; exon_id "ENSE00001863658.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11860 chr22 HAVANA start_codon 22599215 22599217 . + 0 gene_id "ENSG00000169575.4"; transcript_id "ENST00000302273.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB1-002"; exon_number 1; exon_id "ENSE00001863658.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11861 chr22 HAVANA exon 22599372 22599917 . + . gene_id "ENSG00000169575.4"; transcript_id "ENST00000302273.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB1-002"; exon_number 2; exon_id "ENSE00001562403.3"; level 2; tag "basic"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11862 chr22 HAVANA CDS 22599372 22599746 . + 0 gene_id "ENSG00000169575.4"; transcript_id "ENST00000302273.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB1-002"; exon_number 2; exon_id "ENSE00001562403.3"; level 2; tag "basic"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11863 chr22 HAVANA stop_codon 22599747 22599749 . + 0 gene_id "ENSG00000169575.4"; transcript_id "ENST00000302273.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB1-002"; exon_number 2; exon_id "ENSE00001562403.3"; level 2; tag "basic"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11864 chr22 HAVANA UTR 22599192 22599214 . + . gene_id "ENSG00000169575.4"; transcript_id "ENST00000302273.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11865 chr22 HAVANA UTR 22599747 22599917 . + . gene_id "ENSG00000169575.4"; transcript_id "ENST00000302273.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000151042.1"; havana_transcript "OTTHUMT00000321102.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11866 chr22 HAVANA gene 22638312 22641586 . - . gene_id "ENSG00000272216.1"; transcript_id "ENSG00000272216.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-2H8.5"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "LL22NC03-2H8.5"; level 2; havana_gene "OTTHUMG00000185331.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11867 chr22 HAVANA transcript 22638312 22641586 . - . gene_id "ENSG00000272216.1"; transcript_id "ENST00000606654.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-2H8.5"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LL22NC03-2H8.5-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000185331.1"; havana_transcript "OTTHUMT00000470201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11868 chr22 HAVANA exon 22638312 22641586 . - . gene_id "ENSG00000272216.1"; transcript_id "ENST00000606654.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-2H8.5"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LL22NC03-2H8.5-001"; exon_number 1; exon_id "ENSE00003700409.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000185331.1"; havana_transcript "OTTHUMT00000470201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11869 chr22 HAVANA gene 22648098 22649159 . + . gene_id "ENSG00000234630.1"; transcript_id "ENSG00000234630.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-2H8.4"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "LL22NC03-2H8.4"; level 2; havana_gene "OTTHUMG00000151038.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11870 chr22 HAVANA transcript 22648098 22649159 . + . gene_id "ENSG00000234630.1"; transcript_id "ENST00000412149.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-2H8.4"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LL22NC03-2H8.4-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000151038.1"; havana_transcript "OTTHUMT00000321097.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11871 chr22 HAVANA exon 22648098 22648446 . + . gene_id "ENSG00000234630.1"; transcript_id "ENST00000412149.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-2H8.4"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LL22NC03-2H8.4-001"; exon_number 1; exon_id "ENSE00001609685.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151038.1"; havana_transcript "OTTHUMT00000321097.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11872 chr22 HAVANA exon 22648985 22649159 . + . gene_id "ENSG00000234630.1"; transcript_id "ENST00000412149.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-2H8.4"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LL22NC03-2H8.4-001"; exon_number 2; exon_id "ENSE00001693364.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151038.1"; havana_transcript "OTTHUMT00000321097.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11873 chr22 HAVANA gene 22657589 22677203 . + . gene_id "ENSG00000236850.4"; transcript_id "ENSG00000236850.4"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "BMS1P20"; transcript_type "processed_transcript"; transcript_status "NOVEL"; transcript_name "BMS1P20"; level 2; havana_gene "OTTHUMG00000186398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11874 chr22 HAVANA transcript 22657589 22677203 . + . gene_id "ENSG00000236850.4"; transcript_id "ENST00000426066.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "BMS1P20"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BMS1P20-001"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186398.1"; havana_transcript "OTTHUMT00000473090.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11875 chr22 HAVANA exon 22657589 22657662 . + . gene_id "ENSG00000236850.4"; transcript_id "ENST00000426066.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "BMS1P20"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BMS1P20-001"; exon_number 1; exon_id "ENSE00003706239.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186398.1"; havana_transcript "OTTHUMT00000473090.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11876 chr22 HAVANA exon 22658308 22658479 . + . gene_id "ENSG00000236850.4"; transcript_id "ENST00000426066.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "BMS1P20"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BMS1P20-001"; exon_number 2; exon_id "ENSE00003703970.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186398.1"; havana_transcript "OTTHUMT00000473090.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11877 chr22 HAVANA exon 22661155 22661268 . + . gene_id "ENSG00000236850.4"; transcript_id "ENST00000426066.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "BMS1P20"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BMS1P20-001"; exon_number 3; exon_id "ENSE00001796963.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186398.1"; havana_transcript "OTTHUMT00000473090.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11878 chr22 HAVANA exon 22661471 22661610 . + . gene_id "ENSG00000236850.4"; transcript_id "ENST00000426066.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "BMS1P20"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BMS1P20-001"; exon_number 4; exon_id "ENSE00001787991.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186398.1"; havana_transcript "OTTHUMT00000473090.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11879 chr22 HAVANA exon 22663062 22663184 . + . gene_id "ENSG00000236850.4"; transcript_id "ENST00000426066.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "BMS1P20"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BMS1P20-001"; exon_number 5; exon_id "ENSE00003703972.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186398.1"; havana_transcript "OTTHUMT00000473090.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11880 chr22 HAVANA exon 22664101 22664248 . + . gene_id "ENSG00000236850.4"; transcript_id "ENST00000426066.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "BMS1P20"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BMS1P20-001"; exon_number 6; exon_id "ENSE00003705759.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186398.1"; havana_transcript "OTTHUMT00000473090.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11881 chr22 HAVANA exon 22664591 22664766 . + . gene_id "ENSG00000236850.4"; transcript_id "ENST00000426066.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "BMS1P20"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BMS1P20-001"; exon_number 7; exon_id "ENSE00003709913.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186398.1"; havana_transcript "OTTHUMT00000473090.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11882 chr22 HAVANA exon 22673254 22673606 . + . gene_id "ENSG00000236850.4"; transcript_id "ENST00000426066.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "BMS1P20"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BMS1P20-001"; exon_number 8; exon_id "ENSE00001610412.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186398.1"; havana_transcript "OTTHUMT00000473090.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11883 chr22 HAVANA exon 22675937 22676227 . + . gene_id "ENSG00000236850.4"; transcript_id "ENST00000426066.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "BMS1P20"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BMS1P20-001"; exon_number 9; exon_id "ENSE00001756255.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186398.1"; havana_transcript "OTTHUMT00000473090.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11884 chr22 HAVANA exon 22677019 22677203 . + . gene_id "ENSG00000236850.4"; transcript_id "ENST00000426066.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "BMS1P20"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BMS1P20-001"; exon_number 10; exon_id "ENSE00001709557.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186398.1"; havana_transcript "OTTHUMT00000473090.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11885 chr22 HAVANA gene 22657589 22664766 . + . gene_id "ENSG00000272779.1"; transcript_id "ENSG00000272779.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-80A10.6"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-80A10.6"; level 2; havana_gene "OTTHUMG00000151046.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11886 chr22 HAVANA transcript 22657589 22664766 . + . gene_id "ENSG00000272779.1"; transcript_id "ENST00000413293.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-80A10.6"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-80A10.6-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000151046.2"; havana_transcript "OTTHUMT00000321106.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11887 chr22 HAVANA exon 22657589 22657662 . + . gene_id "ENSG00000272779.1"; transcript_id "ENST00000413293.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-80A10.6"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-80A10.6-001"; exon_number 1; exon_id "ENSE00003709307.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000151046.2"; havana_transcript "OTTHUMT00000321106.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11888 chr22 HAVANA exon 22658308 22658479 . + . gene_id "ENSG00000272779.1"; transcript_id "ENST00000413293.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-80A10.6"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-80A10.6-001"; exon_number 2; exon_id "ENSE00003709658.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000151046.2"; havana_transcript "OTTHUMT00000321106.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11889 chr22 HAVANA exon 22661198 22661386 . + . gene_id "ENSG00000272779.1"; transcript_id "ENST00000413293.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-80A10.6"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-80A10.6-001"; exon_number 3; exon_id "ENSE00001757379.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000151046.2"; havana_transcript "OTTHUMT00000321106.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11890 chr22 HAVANA exon 22661471 22661650 . + . gene_id "ENSG00000272779.1"; transcript_id "ENST00000413293.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-80A10.6"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-80A10.6-001"; exon_number 4; exon_id "ENSE00001680522.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000151046.2"; havana_transcript "OTTHUMT00000321106.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11891 chr22 HAVANA exon 22661898 22661956 . + . gene_id "ENSG00000272779.1"; transcript_id "ENST00000413293.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-80A10.6"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-80A10.6-001"; exon_number 5; exon_id "ENSE00001715373.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000151046.2"; havana_transcript "OTTHUMT00000321106.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11892 chr22 HAVANA exon 22663062 22663184 . + . gene_id "ENSG00000272779.1"; transcript_id "ENST00000413293.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-80A10.6"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-80A10.6-001"; exon_number 6; exon_id "ENSE00003708036.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000151046.2"; havana_transcript "OTTHUMT00000321106.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11893 chr22 HAVANA exon 22664101 22664248 . + . gene_id "ENSG00000272779.1"; transcript_id "ENST00000413293.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-80A10.6"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-80A10.6-001"; exon_number 7; exon_id "ENSE00003709092.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000151046.2"; havana_transcript "OTTHUMT00000321106.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11894 chr22 HAVANA exon 22664591 22664766 . + . gene_id "ENSG00000272779.1"; transcript_id "ENST00000413293.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-80A10.6"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-80A10.6-001"; exon_number 8; exon_id "ENSE00003707814.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000151046.2"; havana_transcript "OTTHUMT00000321106.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11895 chr22 HAVANA gene 22673082 22673581 . + . gene_id "ENSG00000211643.2"; transcript_id "ENSG00000211643.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-52"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-52"; level 2; havana_gene "OTTHUMG00000151049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11896 chr22 HAVANA transcript 22673082 22673581 . + . gene_id "ENSG00000211643.2"; transcript_id "ENST00000390289.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-52"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-52-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151049.1"; havana_transcript "OTTHUMT00000321109.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11897 chr22 HAVANA exon 22673082 22673132 . + . gene_id "ENSG00000211643.2"; transcript_id "ENST00000390289.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-52"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-52-001"; exon_number 1; exon_id "ENSE00001838064.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151049.1"; havana_transcript "OTTHUMT00000321109.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11898 chr22 HAVANA CDS 22673087 22673132 . + 0 gene_id "ENSG00000211643.2"; transcript_id "ENST00000390289.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-52"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-52-001"; exon_number 1; exon_id "ENSE00001838064.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151049.1"; havana_transcript "OTTHUMT00000321109.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11899 chr22 HAVANA start_codon 22673087 22673089 . + 0 gene_id "ENSG00000211643.2"; transcript_id "ENST00000390289.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-52"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-52-001"; exon_number 1; exon_id "ENSE00001838064.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151049.1"; havana_transcript "OTTHUMT00000321109.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11900 chr22 HAVANA exon 22673254 22673581 . + . gene_id "ENSG00000211643.2"; transcript_id "ENST00000390289.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-52"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-52-001"; exon_number 2; exon_id "ENSE00001507762.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151049.1"; havana_transcript "OTTHUMT00000321109.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11901 chr22 HAVANA CDS 22673254 22673581 . + 2 gene_id "ENSG00000211643.2"; transcript_id "ENST00000390289.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-52"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-52-001"; exon_number 2; exon_id "ENSE00001507762.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151049.1"; havana_transcript "OTTHUMT00000321109.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11902 chr22 HAVANA UTR 22673082 22673086 . + . gene_id "ENSG00000211643.2"; transcript_id "ENST00000390289.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-52"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-52-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151049.1"; havana_transcript "OTTHUMT00000321109.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11903 chr22 HAVANA gene 22676828 22677336 . + . gene_id "ENSG00000211644.2"; transcript_id "ENSG00000211644.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-51"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-51"; level 2; havana_gene "OTTHUMG00000151035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11904 chr22 HAVANA transcript 22676828 22677336 . + . gene_id "ENSG00000211644.2"; transcript_id "ENST00000390290.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-51"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-51-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151035.1"; havana_transcript "OTTHUMT00000321094.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11905 chr22 HAVANA exon 22676828 22676909 . + . gene_id "ENSG00000211644.2"; transcript_id "ENST00000390290.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-51"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-51-001"; exon_number 1; exon_id "ENSE00001840580.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151035.1"; havana_transcript "OTTHUMT00000321094.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11906 chr22 HAVANA CDS 22676864 22676909 . + 0 gene_id "ENSG00000211644.2"; transcript_id "ENST00000390290.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-51"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-51-001"; exon_number 1; exon_id "ENSE00001840580.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151035.1"; havana_transcript "OTTHUMT00000321094.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11907 chr22 HAVANA start_codon 22676864 22676866 . + 0 gene_id "ENSG00000211644.2"; transcript_id "ENST00000390290.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-51"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-51-001"; exon_number 1; exon_id "ENSE00001840580.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151035.1"; havana_transcript "OTTHUMT00000321094.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11908 chr22 HAVANA exon 22677019 22677336 . + . gene_id "ENSG00000211644.2"; transcript_id "ENST00000390290.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-51"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-51-001"; exon_number 2; exon_id "ENSE00001935213.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151035.1"; havana_transcript "OTTHUMT00000321094.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11909 chr22 HAVANA CDS 22677019 22677336 . + 2 gene_id "ENSG00000211644.2"; transcript_id "ENST00000390290.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-51"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-51-001"; exon_number 2; exon_id "ENSE00001935213.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151035.1"; havana_transcript "OTTHUMT00000321094.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11910 chr22 HAVANA UTR 22676828 22676863 . + . gene_id "ENSG00000211644.2"; transcript_id "ENST00000390290.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-51"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-51-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151035.1"; havana_transcript "OTTHUMT00000321094.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11911 chr22 HAVANA gene 22681658 22682172 . + . gene_id "ENSG00000211645.2"; transcript_id "ENSG00000211645.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-50"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-50"; level 2; havana_gene "OTTHUMG00000151051.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11912 chr22 HAVANA transcript 22681658 22682172 . + . gene_id "ENSG00000211645.2"; transcript_id "ENST00000390291.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-50"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-50-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151051.3"; havana_transcript "OTTHUMT00000321111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11913 chr22 HAVANA exon 22681658 22681754 . + . gene_id "ENSG00000211645.2"; transcript_id "ENST00000390291.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-50"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-50-001"; exon_number 1; exon_id "ENSE00001811687.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151051.3"; havana_transcript "OTTHUMT00000321111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11914 chr22 HAVANA CDS 22681709 22681754 . + 0 gene_id "ENSG00000211645.2"; transcript_id "ENST00000390291.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-50"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-50-001"; exon_number 1; exon_id "ENSE00001811687.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151051.3"; havana_transcript "OTTHUMT00000321111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11915 chr22 HAVANA start_codon 22681709 22681711 . + 0 gene_id "ENSG00000211645.2"; transcript_id "ENST00000390291.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-50"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-50-001"; exon_number 1; exon_id "ENSE00001811687.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151051.3"; havana_transcript "OTTHUMT00000321111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11916 chr22 HAVANA exon 22681865 22682172 . + . gene_id "ENSG00000211645.2"; transcript_id "ENST00000390291.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-50"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-50-001"; exon_number 2; exon_id "ENSE00001956557.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151051.3"; havana_transcript "OTTHUMT00000321111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11917 chr22 HAVANA CDS 22681865 22682172 . + 2 gene_id "ENSG00000211645.2"; transcript_id "ENST00000390291.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-50"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-50-001"; exon_number 2; exon_id "ENSE00001956557.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151051.3"; havana_transcript "OTTHUMT00000321111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11918 chr22 HAVANA UTR 22681658 22681708 . + . gene_id "ENSG00000211645.2"; transcript_id "ENST00000390291.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-50"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-50-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151051.3"; havana_transcript "OTTHUMT00000321111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11919 chr22 HAVANA gene 22693926 22695567 . + . gene_id "ENSG00000225724.1"; transcript_id "ENSG00000225724.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-80A10.11"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-80A10.11"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000151037.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11920 chr22 HAVANA transcript 22693926 22695567 . + . gene_id "ENSG00000225724.1"; transcript_id "ENST00000436538.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-80A10.11"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-80A10.11-001"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000151037.1"; havana_transcript "OTTHUMT00000321096.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11921 chr22 HAVANA exon 22693926 22695567 . + . gene_id "ENSG00000225724.1"; transcript_id "ENST00000436538.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-80A10.11"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-80A10.11-001"; exon_number 1; exon_id "ENSE00001797759.1"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000151037.1"; havana_transcript "OTTHUMT00000321096.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11922 chr22 HAVANA gene 22697539 22698084 . + . gene_id "ENSG00000223350.2"; transcript_id "ENSG00000223350.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV9-49"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV9-49"; level 2; havana_gene "OTTHUMG00000151045.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11923 chr22 HAVANA transcript 22697539 22698084 . + . gene_id "ENSG00000223350.2"; transcript_id "ENST00000427632.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV9-49"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV9-49-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151045.1"; havana_transcript "OTTHUMT00000321105.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11924 chr22 HAVANA exon 22697539 22697621 . + . gene_id "ENSG00000223350.2"; transcript_id "ENST00000427632.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV9-49"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV9-49-001"; exon_number 1; exon_id "ENSE00001748595.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151045.1"; havana_transcript "OTTHUMT00000321105.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11925 chr22 HAVANA CDS 22697576 22697621 . + 0 gene_id "ENSG00000223350.2"; transcript_id "ENST00000427632.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV9-49"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV9-49-001"; exon_number 1; exon_id "ENSE00001748595.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151045.1"; havana_transcript "OTTHUMT00000321105.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11926 chr22 HAVANA start_codon 22697576 22697578 . + 0 gene_id "ENSG00000223350.2"; transcript_id "ENST00000427632.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV9-49"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV9-49-001"; exon_number 1; exon_id "ENSE00001748595.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151045.1"; havana_transcript "OTTHUMT00000321105.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11927 chr22 HAVANA exon 22697759 22698084 . + . gene_id "ENSG00000223350.2"; transcript_id "ENST00000427632.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV9-49"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV9-49-001"; exon_number 2; exon_id "ENSE00001591312.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151045.1"; havana_transcript "OTTHUMT00000321105.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11928 chr22 HAVANA CDS 22697759 22698081 . + 2 gene_id "ENSG00000223350.2"; transcript_id "ENST00000427632.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV9-49"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV9-49-001"; exon_number 2; exon_id "ENSE00001591312.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151045.1"; havana_transcript "OTTHUMT00000321105.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11929 chr22 HAVANA stop_codon 22698082 22698084 . + 0 gene_id "ENSG00000223350.2"; transcript_id "ENST00000427632.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV9-49"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV9-49-001"; exon_number 2; exon_id "ENSE00001591312.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151045.1"; havana_transcript "OTTHUMT00000321105.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11930 chr22 HAVANA UTR 22697539 22697575 . + . gene_id "ENSG00000223350.2"; transcript_id "ENST00000427632.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV9-49"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV9-49-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151045.1"; havana_transcript "OTTHUMT00000321105.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11931 chr22 HAVANA UTR 22698082 22698084 . + . gene_id "ENSG00000223350.2"; transcript_id "ENST00000427632.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV9-49"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV9-49-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151045.1"; havana_transcript "OTTHUMT00000321105.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11932 chr22 HAVANA gene 22702157 22702514 . + . gene_id "ENSG00000232515.1"; transcript_id "ENSG00000232515.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-75A1.9"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-75A1.9"; level 2; havana_gene "OTTHUMG00000151039.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11933 chr22 HAVANA transcript 22702157 22702514 . + . gene_id "ENSG00000232515.1"; transcript_id "ENST00000440829.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-75A1.9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-75A1.9-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151039.1"; havana_transcript "OTTHUMT00000321098.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11934 chr22 HAVANA exon 22702157 22702514 . + . gene_id "ENSG00000232515.1"; transcript_id "ENST00000440829.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-75A1.9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-75A1.9-001"; exon_number 1; exon_id "ENSE00001692642.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151039.1"; havana_transcript "OTTHUMT00000321098.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11935 chr22 HAVANA gene 22707289 22707781 . + . gene_id "ENSG00000211647.1"; transcript_id "ENSG00000211647.1"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-48"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-48"; level 2; havana_gene "OTTHUMG00000151041.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11936 chr22 HAVANA transcript 22707289 22707781 . + . gene_id "ENSG00000211647.1"; transcript_id "ENST00000390293.1"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-48"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-48-001"; level 2; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151041.2"; havana_transcript "OTTHUMT00000321100.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11937 chr22 HAVANA exon 22707289 22707334 . + . gene_id "ENSG00000211647.1"; transcript_id "ENST00000390293.1"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-48"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-48-001"; exon_number 1; exon_id "ENSE00001753445.1"; level 2; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151041.2"; havana_transcript "OTTHUMT00000321100.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11938 chr22 HAVANA CDS 22707289 22707334 . + 0 gene_id "ENSG00000211647.1"; transcript_id "ENST00000390293.1"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-48"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-48-001"; exon_number 1; exon_id "ENSE00001753445.1"; level 2; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151041.2"; havana_transcript "OTTHUMT00000321100.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11939 chr22 HAVANA start_codon 22707289 22707291 . + 0 gene_id "ENSG00000211647.1"; transcript_id "ENST00000390293.1"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-48"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-48-001"; exon_number 1; exon_id "ENSE00001753445.1"; level 2; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151041.2"; havana_transcript "OTTHUMT00000321100.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11940 chr22 HAVANA exon 22707459 22707781 . + . gene_id "ENSG00000211647.1"; transcript_id "ENST00000390293.1"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-48"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-48-001"; exon_number 2; exon_id "ENSE00001682694.1"; level 2; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151041.2"; havana_transcript "OTTHUMT00000321100.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11941 chr22 HAVANA CDS 22707459 22707781 . + 2 gene_id "ENSG00000211647.1"; transcript_id "ENST00000390293.1"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-48"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-48-001"; exon_number 2; exon_id "ENSE00001682694.1"; level 2; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151041.2"; havana_transcript "OTTHUMT00000321100.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11942 chr22 HAVANA gene 22712087 22712608 . + . gene_id "ENSG00000211648.2"; transcript_id "ENSG00000211648.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-47"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-47"; level 2; havana_gene "OTTHUMG00000151048.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11943 chr22 HAVANA transcript 22712087 22712608 . + . gene_id "ENSG00000211648.2"; transcript_id "ENST00000390294.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-47"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-47-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151048.2"; havana_transcript "OTTHUMT00000321108.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11944 chr22 HAVANA exon 22712087 22712188 . + . gene_id "ENSG00000211648.2"; transcript_id "ENST00000390294.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-47"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-47-001"; exon_number 1; exon_id "ENSE00001869500.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151048.2"; havana_transcript "OTTHUMT00000321108.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11945 chr22 HAVANA CDS 22712143 22712188 . + 0 gene_id "ENSG00000211648.2"; transcript_id "ENST00000390294.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-47"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-47-001"; exon_number 1; exon_id "ENSE00001869500.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151048.2"; havana_transcript "OTTHUMT00000321108.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11946 chr22 HAVANA start_codon 22712143 22712145 . + 0 gene_id "ENSG00000211648.2"; transcript_id "ENST00000390294.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-47"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-47-001"; exon_number 1; exon_id "ENSE00001869500.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151048.2"; havana_transcript "OTTHUMT00000321108.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11947 chr22 HAVANA exon 22712304 22712608 . + . gene_id "ENSG00000211648.2"; transcript_id "ENST00000390294.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-47"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-47-001"; exon_number 2; exon_id "ENSE00001935888.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151048.2"; havana_transcript "OTTHUMT00000321108.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11948 chr22 HAVANA CDS 22712304 22712608 . + 2 gene_id "ENSG00000211648.2"; transcript_id "ENST00000390294.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-47"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-47-001"; exon_number 2; exon_id "ENSE00001935888.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151048.2"; havana_transcript "OTTHUMT00000321108.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11949 chr22 HAVANA UTR 22712087 22712142 . + . gene_id "ENSG00000211648.2"; transcript_id "ENST00000390294.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-47"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-47-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151048.2"; havana_transcript "OTTHUMT00000321108.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11950 chr22 HAVANA gene 22720578 22722138 . + . gene_id "ENSG00000237428.1"; transcript_id "ENSG00000237428.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-22A12.9"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-22A12.9"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000151052.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11951 chr22 HAVANA transcript 22720578 22722138 . + . gene_id "ENSG00000237428.1"; transcript_id "ENST00000453999.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-22A12.9"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-22A12.9-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000151052.1"; havana_transcript "OTTHUMT00000321112.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11952 chr22 HAVANA exon 22720578 22722138 . + . gene_id "ENSG00000237428.1"; transcript_id "ENST00000453999.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-22A12.9"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-22A12.9-001"; exon_number 1; exon_id "ENSE00001632659.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000151052.1"; havana_transcript "OTTHUMT00000321112.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11953 chr22 HAVANA gene 22723982 22724454 . + . gene_id "ENSG00000211649.2"; transcript_id "ENSG00000211649.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-46"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-46"; level 2; havana_gene "OTTHUMG00000151040.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11954 chr22 HAVANA transcript 22723982 22724454 . + . gene_id "ENSG00000211649.2"; transcript_id "ENST00000390295.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-46"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-46-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151040.1"; havana_transcript "OTTHUMT00000321099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11955 chr22 HAVANA exon 22723982 22724061 . + . gene_id "ENSG00000211649.2"; transcript_id "ENST00000390295.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-46"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-46-001"; exon_number 1; exon_id "ENSE00001890611.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151040.1"; havana_transcript "OTTHUMT00000321099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11956 chr22 HAVANA CDS 22724016 22724061 . + 0 gene_id "ENSG00000211649.2"; transcript_id "ENST00000390295.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-46"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-46-001"; exon_number 1; exon_id "ENSE00001890611.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151040.1"; havana_transcript "OTTHUMT00000321099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11957 chr22 HAVANA start_codon 22724016 22724018 . + 0 gene_id "ENSG00000211649.2"; transcript_id "ENST00000390295.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-46"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-46-001"; exon_number 1; exon_id "ENSE00001890611.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151040.1"; havana_transcript "OTTHUMT00000321099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11958 chr22 HAVANA exon 22724151 22724454 . + . gene_id "ENSG00000211649.2"; transcript_id "ENST00000390295.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-46"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-46-001"; exon_number 2; exon_id "ENSE00001882545.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151040.1"; havana_transcript "OTTHUMT00000321099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11959 chr22 HAVANA CDS 22724151 22724454 . + 2 gene_id "ENSG00000211649.2"; transcript_id "ENST00000390295.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-46"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-46-001"; exon_number 2; exon_id "ENSE00001882545.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151040.1"; havana_transcript "OTTHUMT00000321099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11960 chr22 HAVANA UTR 22723982 22724015 . + . gene_id "ENSG00000211649.2"; transcript_id "ENST00000390295.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-46"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-46-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151040.1"; havana_transcript "OTTHUMT00000321099.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11961 chr22 HAVANA gene 22725197 22725488 . + . gene_id "ENSG00000232603.1"; transcript_id "ENSG00000232603.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-22A12.12"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-22A12.12"; level 2; havana_gene "OTTHUMG00000151055.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11962 chr22 HAVANA transcript 22725197 22725488 . + . gene_id "ENSG00000232603.1"; transcript_id "ENST00000443400.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-22A12.12"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-22A12.12-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151055.1"; havana_transcript "OTTHUMT00000321115.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11963 chr22 HAVANA exon 22725197 22725488 . + . gene_id "ENSG00000232603.1"; transcript_id "ENST00000443400.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-22A12.12"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-22A12.12-001"; exon_number 1; exon_id "ENSE00001601081.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151055.1"; havana_transcript "OTTHUMT00000321115.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11964 chr22 HAVANA gene 22730355 22730874 . + . gene_id "ENSG00000211650.2"; transcript_id "ENSG00000211650.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-45"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-45"; level 2; havana_gene "OTTHUMG00000151054.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11965 chr22 HAVANA transcript 22730355 22730874 . + . gene_id "ENSG00000211650.2"; transcript_id "ENST00000390296.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-45"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-45-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151054.2"; havana_transcript "OTTHUMT00000321114.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11966 chr22 HAVANA exon 22730355 22730428 . + . gene_id "ENSG00000211650.2"; transcript_id "ENST00000390296.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-45"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-45-001"; exon_number 1; exon_id "ENSE00001846140.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151054.2"; havana_transcript "OTTHUMT00000321114.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11967 chr22 HAVANA CDS 22730383 22730428 . + 0 gene_id "ENSG00000211650.2"; transcript_id "ENST00000390296.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-45"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-45-001"; exon_number 1; exon_id "ENSE00001846140.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151054.2"; havana_transcript "OTTHUMT00000321114.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11968 chr22 HAVANA start_codon 22730383 22730385 . + 0 gene_id "ENSG00000211650.2"; transcript_id "ENST00000390296.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-45"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-45-001"; exon_number 1; exon_id "ENSE00001846140.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151054.2"; havana_transcript "OTTHUMT00000321114.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11969 chr22 HAVANA exon 22730552 22730874 . + . gene_id "ENSG00000211650.2"; transcript_id "ENST00000390296.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-45"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-45-001"; exon_number 2; exon_id "ENSE00001620928.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151054.2"; havana_transcript "OTTHUMT00000321114.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11970 chr22 HAVANA CDS 22730552 22730874 . + 2 gene_id "ENSG00000211650.2"; transcript_id "ENST00000390296.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-45"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-45-001"; exon_number 2; exon_id "ENSE00001620928.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151054.2"; havana_transcript "OTTHUMT00000321114.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11971 chr22 HAVANA UTR 22730355 22730382 . + . gene_id "ENSG00000211650.2"; transcript_id "ENST00000390296.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-45"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-45-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151054.2"; havana_transcript "OTTHUMT00000321114.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11972 chr22 HAVANA gene 22735135 22735715 . + . gene_id "ENSG00000211651.2"; transcript_id "ENSG00000211651.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-44"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-44"; level 2; havana_gene "OTTHUMG00000151050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11973 chr22 HAVANA transcript 22735135 22735715 . + . gene_id "ENSG00000211651.2"; transcript_id "ENST00000390297.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-44"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-44-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151050.1"; havana_transcript "OTTHUMT00000321110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11974 chr22 HAVANA exon 22735135 22735294 . + . gene_id "ENSG00000211651.2"; transcript_id "ENST00000390297.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-44"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-44-001"; exon_number 1; exon_id "ENSE00001872422.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151050.1"; havana_transcript "OTTHUMT00000321110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11975 chr22 HAVANA CDS 22735249 22735294 . + 0 gene_id "ENSG00000211651.2"; transcript_id "ENST00000390297.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-44"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-44-001"; exon_number 1; exon_id "ENSE00001872422.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151050.1"; havana_transcript "OTTHUMT00000321110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11976 chr22 HAVANA start_codon 22735249 22735251 . + 0 gene_id "ENSG00000211651.2"; transcript_id "ENST00000390297.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-44"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-44-001"; exon_number 1; exon_id "ENSE00001872422.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151050.1"; havana_transcript "OTTHUMT00000321110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11977 chr22 HAVANA exon 22735410 22735715 . + . gene_id "ENSG00000211651.2"; transcript_id "ENST00000390297.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-44"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-44-001"; exon_number 2; exon_id "ENSE00001901486.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151050.1"; havana_transcript "OTTHUMT00000321110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11978 chr22 HAVANA CDS 22735410 22735715 . + 2 gene_id "ENSG00000211651.2"; transcript_id "ENST00000390297.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-44"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-44-001"; exon_number 2; exon_id "ENSE00001901486.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151050.1"; havana_transcript "OTTHUMT00000321110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11979 chr22 HAVANA UTR 22735135 22735248 . + . gene_id "ENSG00000211651.2"; transcript_id "ENST00000390297.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-44"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-44-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151050.1"; havana_transcript "OTTHUMT00000321110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11980 chr22 HAVANA gene 22749356 22749827 . + . gene_id "ENSG00000211652.2"; transcript_id "ENSG00000211652.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-43"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-43"; level 2; havana_gene "OTTHUMG00000151053.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11981 chr22 HAVANA transcript 22749356 22749827 . + . gene_id "ENSG00000211652.2"; transcript_id "ENST00000390298.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-43"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-43-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151053.1"; havana_transcript "OTTHUMT00000321113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11982 chr22 HAVANA exon 22749356 22749435 . + . gene_id "ENSG00000211652.2"; transcript_id "ENST00000390298.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-43"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-43-001"; exon_number 1; exon_id "ENSE00001841625.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151053.1"; havana_transcript "OTTHUMT00000321113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11983 chr22 HAVANA CDS 22749390 22749435 . + 0 gene_id "ENSG00000211652.2"; transcript_id "ENST00000390298.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-43"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-43-001"; exon_number 1; exon_id "ENSE00001841625.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151053.1"; havana_transcript "OTTHUMT00000321113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11984 chr22 HAVANA start_codon 22749390 22749392 . + 0 gene_id "ENSG00000211652.2"; transcript_id "ENST00000390298.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-43"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-43-001"; exon_number 1; exon_id "ENSE00001841625.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151053.1"; havana_transcript "OTTHUMT00000321113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11985 chr22 HAVANA exon 22749523 22749827 . + . gene_id "ENSG00000211652.2"; transcript_id "ENST00000390298.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-43"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-43-001"; exon_number 2; exon_id "ENSE00001609253.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151053.1"; havana_transcript "OTTHUMT00000321113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11986 chr22 HAVANA CDS 22749523 22749827 . + 2 gene_id "ENSG00000211652.2"; transcript_id "ENST00000390298.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-43"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-43-001"; exon_number 2; exon_id "ENSE00001609253.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151053.1"; havana_transcript "OTTHUMT00000321113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11987 chr22 HAVANA UTR 22749356 22749389 . + . gene_id "ENSG00000211652.2"; transcript_id "ENST00000390298.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV7-43"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV7-43-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151053.1"; havana_transcript "OTTHUMT00000321113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11988 chr22 HAVANA gene 22751369 22751861 . + . gene_id "ENSG00000254175.1"; transcript_id "ENSG00000254175.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-42"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-42"; level 2; havana_gene "OTTHUMG00000151043.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11989 chr22 HAVANA transcript 22751369 22751861 . + . gene_id "ENSG00000254175.1"; transcript_id "ENST00000522485.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-42"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-42-001"; level 2; havana_gene "OTTHUMG00000151043.1"; havana_transcript "OTTHUMT00000321103.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11990 chr22 HAVANA exon 22751369 22751413 . + . gene_id "ENSG00000254175.1"; transcript_id "ENST00000522485.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-42"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-42-001"; exon_number 1; exon_id "ENSE00002111753.1"; level 2; havana_gene "OTTHUMG00000151043.1"; havana_transcript "OTTHUMT00000321103.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11991 chr22 HAVANA exon 22751526 22751861 . + . gene_id "ENSG00000254175.1"; transcript_id "ENST00000522485.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-42"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-42-001"; exon_number 2; exon_id "ENSE00002117447.1"; level 2; havana_gene "OTTHUMG00000151043.1"; havana_transcript "OTTHUMT00000321103.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11992 chr22 HAVANA gene 22753184 22753334 . + . gene_id "ENSG00000254073.1"; transcript_id "ENSG00000254073.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVVII-41-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVVII-41-1"; level 2; havana_gene "OTTHUMG00000151296.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11993 chr22 HAVANA transcript 22753184 22753334 . + . gene_id "ENSG00000254073.1"; transcript_id "ENST00000518405.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVVII-41-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVVII-41-1-001"; level 2; havana_gene "OTTHUMG00000151296.1"; havana_transcript "OTTHUMT00000322126.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11994 chr22 HAVANA exon 22753184 22753334 . + . gene_id "ENSG00000254073.1"; transcript_id "ENST00000518405.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVVII-41-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVVII-41-1-001"; exon_number 1; exon_id "ENSE00002118596.1"; level 2; havana_gene "OTTHUMG00000151296.1"; havana_transcript "OTTHUMT00000322126.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11995 chr22 HAVANA gene 22758539 22759053 . + . gene_id "ENSG00000253818.1"; transcript_id "ENSG00000253818.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV1-41"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV1-41"; level 2; havana_gene "OTTHUMG00000151056.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11996 chr22 HAVANA transcript 22758539 22759053 . + . gene_id "ENSG00000253818.1"; transcript_id "ENST00000519790.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV1-41"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV1-41-001"; level 2; havana_gene "OTTHUMG00000151056.1"; havana_transcript "OTTHUMT00000321116.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11997 chr22 HAVANA exon 22758539 22758637 . + . gene_id "ENSG00000253818.1"; transcript_id "ENST00000519790.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV1-41"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV1-41-001"; exon_number 1; exon_id "ENSE00002133577.1"; level 2; havana_gene "OTTHUMG00000151056.1"; havana_transcript "OTTHUMT00000321116.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11998 chr22 HAVANA exon 22758747 22759053 . + . gene_id "ENSG00000253818.1"; transcript_id "ENST00000519790.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV1-41"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV1-41-001"; exon_number 2; exon_id "ENSE00002126711.1"; level 2; havana_gene "OTTHUMG00000151056.1"; havana_transcript "OTTHUMT00000321116.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
11999 chr22 HAVANA gene 22764098 22764614 . + . gene_id "ENSG00000211653.2"; transcript_id "ENSG00000211653.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-40"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-40"; level 2; havana_gene "OTTHUMG00000151072.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12000 chr22 HAVANA transcript 22764098 22764614 . + . gene_id "ENSG00000211653.2"; transcript_id "ENST00000390299.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-40"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-40-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151072.1"; havana_transcript "OTTHUMT00000321176.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12001 chr22 HAVANA exon 22764098 22764194 . + . gene_id "ENSG00000211653.2"; transcript_id "ENST00000390299.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-40"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-40-001"; exon_number 1; exon_id "ENSE00001824662.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151072.1"; havana_transcript "OTTHUMT00000321176.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12002 chr22 HAVANA CDS 22764149 22764194 . + 0 gene_id "ENSG00000211653.2"; transcript_id "ENST00000390299.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-40"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-40-001"; exon_number 1; exon_id "ENSE00001824662.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151072.1"; havana_transcript "OTTHUMT00000321176.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12003 chr22 HAVANA start_codon 22764149 22764151 . + 0 gene_id "ENSG00000211653.2"; transcript_id "ENST00000390299.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-40"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-40-001"; exon_number 1; exon_id "ENSE00001824662.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151072.1"; havana_transcript "OTTHUMT00000321176.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12004 chr22 HAVANA exon 22764305 22764614 . + . gene_id "ENSG00000211653.2"; transcript_id "ENST00000390299.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-40"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-40-001"; exon_number 2; exon_id "ENSE00001507782.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151072.1"; havana_transcript "OTTHUMT00000321176.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12005 chr22 HAVANA CDS 22764305 22764614 . + 2 gene_id "ENSG00000211653.2"; transcript_id "ENST00000390299.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-40"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-40-001"; exon_number 2; exon_id "ENSE00001507782.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151072.1"; havana_transcript "OTTHUMT00000321176.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12006 chr22 HAVANA UTR 22764098 22764148 . + . gene_id "ENSG00000211653.2"; transcript_id "ENST00000390299.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-40"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-40-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151072.1"; havana_transcript "OTTHUMT00000321176.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12007 chr22 HAVANA gene 22774663 22775647 . + . gene_id "ENSG00000224144.1"; transcript_id "ENSG00000224144.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ASH2LP1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "ASH2LP1"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000151071.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12008 chr22 HAVANA transcript 22774663 22775647 . + . gene_id "ENSG00000224144.1"; transcript_id "ENST00000438037.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ASH2LP1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ASH2LP1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000151071.1"; havana_transcript "OTTHUMT00000321175.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12009 chr22 HAVANA exon 22774663 22775647 . + . gene_id "ENSG00000224144.1"; transcript_id "ENST00000438037.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ASH2LP1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ASH2LP1-001"; exon_number 1; exon_id "ENSE00001676117.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000151071.1"; havana_transcript "OTTHUMT00000321175.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12010 chr22 HAVANA gene 22780158 22780651 . + . gene_id "ENSG00000253889.1"; transcript_id "ENSG00000253889.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-38"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-38"; level 2; havana_gene "OTTHUMG00000151073.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12011 chr22 HAVANA transcript 22780158 22780651 . + . gene_id "ENSG00000253889.1"; transcript_id "ENST00000519982.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-38"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-38-001"; level 2; havana_gene "OTTHUMG00000151073.1"; havana_transcript "OTTHUMT00000321178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12012 chr22 HAVANA exon 22780158 22780206 . + . gene_id "ENSG00000253889.1"; transcript_id "ENST00000519982.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-38"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-38-001"; exon_number 1; exon_id "ENSE00002138016.1"; level 2; havana_gene "OTTHUMG00000151073.1"; havana_transcript "OTTHUMT00000321178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12013 chr22 HAVANA exon 22780316 22780651 . + . gene_id "ENSG00000253889.1"; transcript_id "ENST00000519982.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-38"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-38-001"; exon_number 2; exon_id "ENSE00002126970.1"; level 2; havana_gene "OTTHUMG00000151073.1"; havana_transcript "OTTHUMT00000321178.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12014 chr22 HAVANA gene 22781876 22782371 . + . gene_id "ENSG00000211654.2"; transcript_id "ENSG00000211654.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-37"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-37"; level 2; havana_gene "OTTHUMG00000151069.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12015 chr22 HAVANA transcript 22781876 22782371 . + . gene_id "ENSG00000211654.2"; transcript_id "ENST00000390300.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-37"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-37-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151069.1"; havana_transcript "OTTHUMT00000321173.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12016 chr22 HAVANA exon 22781876 22781926 . + . gene_id "ENSG00000211654.2"; transcript_id "ENST00000390300.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-37"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-37-001"; exon_number 1; exon_id "ENSE00001915748.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151069.1"; havana_transcript "OTTHUMT00000321173.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12017 chr22 HAVANA CDS 22781881 22781926 . + 0 gene_id "ENSG00000211654.2"; transcript_id "ENST00000390300.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-37"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-37-001"; exon_number 1; exon_id "ENSE00001915748.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151069.1"; havana_transcript "OTTHUMT00000321173.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12018 chr22 HAVANA start_codon 22781881 22781883 . + 0 gene_id "ENSG00000211654.2"; transcript_id "ENST00000390300.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-37"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-37-001"; exon_number 1; exon_id "ENSE00001915748.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151069.1"; havana_transcript "OTTHUMT00000321173.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12019 chr22 HAVANA exon 22782049 22782371 . + . gene_id "ENSG00000211654.2"; transcript_id "ENST00000390300.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-37"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-37-001"; exon_number 2; exon_id "ENSE00001799313.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151069.1"; havana_transcript "OTTHUMT00000321173.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12020 chr22 HAVANA CDS 22782049 22782371 . + 2 gene_id "ENSG00000211654.2"; transcript_id "ENST00000390300.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-37"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-37-001"; exon_number 2; exon_id "ENSE00001799313.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151069.1"; havana_transcript "OTTHUMT00000321173.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12021 chr22 HAVANA UTR 22781876 22781880 . + . gene_id "ENSG00000211654.2"; transcript_id "ENST00000390300.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV5-37"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV5-37-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151069.1"; havana_transcript "OTTHUMT00000321173.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12022 chr22 HAVANA gene 22786296 22786802 . + . gene_id "ENSG00000211655.2"; transcript_id "ENSG00000211655.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-36"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-36"; level 2; havana_gene "OTTHUMG00000151074.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12023 chr22 HAVANA transcript 22786296 22786802 . + . gene_id "ENSG00000211655.2"; transcript_id "ENST00000390301.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-36"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-36-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151074.1"; havana_transcript "OTTHUMT00000321179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12024 chr22 HAVANA exon 22786296 22786381 . + . gene_id "ENSG00000211655.2"; transcript_id "ENST00000390301.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-36"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-36-001"; exon_number 1; exon_id "ENSE00001894044.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151074.1"; havana_transcript "OTTHUMT00000321179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12025 chr22 HAVANA CDS 22786336 22786381 . + 0 gene_id "ENSG00000211655.2"; transcript_id "ENST00000390301.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-36"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-36-001"; exon_number 1; exon_id "ENSE00001894044.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151074.1"; havana_transcript "OTTHUMT00000321179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12026 chr22 HAVANA start_codon 22786336 22786338 . + 0 gene_id "ENSG00000211655.2"; transcript_id "ENST00000390301.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-36"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-36-001"; exon_number 1; exon_id "ENSE00001894044.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151074.1"; havana_transcript "OTTHUMT00000321179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12027 chr22 HAVANA exon 22786497 22786802 . + . gene_id "ENSG00000211655.2"; transcript_id "ENST00000390301.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-36"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-36-001"; exon_number 2; exon_id "ENSE00001874124.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151074.1"; havana_transcript "OTTHUMT00000321179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12028 chr22 HAVANA CDS 22786497 22786802 . + 2 gene_id "ENSG00000211655.2"; transcript_id "ENST00000390301.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-36"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-36-001"; exon_number 2; exon_id "ENSE00001874124.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151074.1"; havana_transcript "OTTHUMT00000321179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12029 chr22 HAVANA UTR 22786296 22786335 . + . gene_id "ENSG00000211655.2"; transcript_id "ENST00000390301.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV1-36"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV1-36-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151074.1"; havana_transcript "OTTHUMT00000321179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12030 chr22 HAVANA gene 22801024 22802674 . + . gene_id "ENSG00000230821.1"; transcript_id "ENSG00000230821.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-288A10.17"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "KB-288A10.17"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000151070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12031 chr22 HAVANA transcript 22801024 22802674 . + . gene_id "ENSG00000230821.1"; transcript_id "ENST00000451224.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-288A10.17"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-288A10.17-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000151070.1"; havana_transcript "OTTHUMT00000321174.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12032 chr22 HAVANA exon 22801024 22802674 . + . gene_id "ENSG00000230821.1"; transcript_id "ENST00000451224.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-288A10.17"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-288A10.17-001"; exon_number 1; exon_id "ENSE00001737401.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000151070.1"; havana_transcript "OTTHUMT00000321174.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12033 chr22 HAVANA gene 22804540 22804990 . + . gene_id "ENSG00000253631.1"; transcript_id "ENSG00000253631.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV7-35"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV7-35"; level 2; havana_gene "OTTHUMG00000151067.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12034 chr22 HAVANA transcript 22804540 22804990 . + . gene_id "ENSG00000253631.1"; transcript_id "ENST00000523314.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV7-35"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV7-35-001"; level 2; havana_gene "OTTHUMG00000151067.1"; havana_transcript "OTTHUMT00000321171.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12035 chr22 HAVANA exon 22804540 22804573 . + . gene_id "ENSG00000253631.1"; transcript_id "ENST00000523314.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV7-35"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV7-35-001"; exon_number 1; exon_id "ENSE00002122468.1"; level 2; havana_gene "OTTHUMG00000151067.1"; havana_transcript "OTTHUMT00000321171.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12036 chr22 HAVANA exon 22804685 22804990 . + . gene_id "ENSG00000253631.1"; transcript_id "ENST00000523314.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV7-35"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV7-35-001"; exon_number 2; exon_id "ENSE00002100215.1"; level 2; havana_gene "OTTHUMG00000151067.1"; havana_transcript "OTTHUMT00000321171.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12037 chr22 HAVANA gene 22819996 22820323 . + . gene_id "ENSG00000226595.1"; transcript_id "ENSG00000226595.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-288A10.19"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "KB-288A10.19"; level 2; havana_gene "OTTHUMG00000151068.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12038 chr22 HAVANA transcript 22819996 22820323 . + . gene_id "ENSG00000226595.1"; transcript_id "ENST00000419501.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-288A10.19"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-288A10.19-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151068.1"; havana_transcript "OTTHUMT00000321172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12039 chr22 HAVANA exon 22819996 22820323 . + . gene_id "ENSG00000226595.1"; transcript_id "ENST00000419501.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-288A10.19"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-288A10.19-001"; exon_number 1; exon_id "ENSE00001766346.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151068.1"; havana_transcript "OTTHUMT00000321172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12040 chr22 HAVANA gene 22838767 22863505 . - . gene_id "ENSG00000198477.3"; transcript_id "ENSG00000198477.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B"; level 2; havana_gene "OTTHUMG00000151066.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12041 chr22 HAVANA transcript 22838767 22863472 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12042 chr22 HAVANA exon 22862977 22863472 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; exon_number 1; exon_id "ENSE00001556537.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12043 chr22 HAVANA exon 22862128 22862188 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; exon_number 2; exon_id "ENSE00001534715.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12044 chr22 HAVANA exon 22848382 22848499 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; exon_number 3; exon_id "ENSE00001534713.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12045 chr22 HAVANA exon 22841203 22843791 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; exon_number 4; exon_id "ENSE00001556678.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12046 chr22 HAVANA CDS 22842095 22843723 . - 0 gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; exon_number 4; exon_id "ENSE00001556678.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12047 chr22 HAVANA start_codon 22843721 22843723 . - 0 gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; exon_number 4; exon_id "ENSE00001556678.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12048 chr22 HAVANA stop_codon 22842092 22842094 . - 0 gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; exon_number 4; exon_id "ENSE00001556678.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12049 chr22 HAVANA exon 22838767 22840320 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; exon_number 5; exon_id "ENSE00001559044.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12050 chr22 HAVANA UTR 22862977 22863472 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12051 chr22 HAVANA UTR 22862128 22862188 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12052 chr22 HAVANA UTR 22848382 22848499 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12053 chr22 HAVANA UTR 22841203 22842094 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12054 chr22 HAVANA UTR 22843724 22843791 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12055 chr22 HAVANA UTR 22838767 22840320 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000406426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2"; havana_transcript "OTTHUMT00000321170.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12056 chr22 ENSEMBL transcript 22838774 22863505 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000360412.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12057 chr22 ENSEMBL exon 22862977 22863505 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000360412.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-201"; exon_number 1; exon_id "ENSE00001534717.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12058 chr22 ENSEMBL exon 22862128 22862188 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000360412.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-201"; exon_number 2; exon_id "ENSE00001534715.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12059 chr22 ENSEMBL exon 22848382 22848499 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000360412.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-201"; exon_number 3; exon_id "ENSE00001534713.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12060 chr22 ENSEMBL exon 22838774 22843791 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000360412.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-201"; exon_number 4; exon_id "ENSE00001256451.5"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12061 chr22 ENSEMBL CDS 22842095 22843723 . - 0 gene_id "ENSG00000198477.3"; transcript_id "ENST00000360412.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-201"; exon_number 4; exon_id "ENSE00001256451.5"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12062 chr22 ENSEMBL start_codon 22843721 22843723 . - 0 gene_id "ENSG00000198477.3"; transcript_id "ENST00000360412.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-201"; exon_number 4; exon_id "ENSE00001256451.5"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12063 chr22 ENSEMBL stop_codon 22842092 22842094 . - 0 gene_id "ENSG00000198477.3"; transcript_id "ENST00000360412.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-201"; exon_number 4; exon_id "ENSE00001256451.5"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12064 chr22 ENSEMBL UTR 22862977 22863505 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000360412.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12065 chr22 ENSEMBL UTR 22862128 22862188 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000360412.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12066 chr22 ENSEMBL UTR 22848382 22848499 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000360412.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12067 chr22 ENSEMBL UTR 22838774 22842094 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000360412.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12068 chr22 ENSEMBL UTR 22843724 22843791 . - . gene_id "ENSG00000198477.3"; transcript_id "ENST00000360412.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280B-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13799.1"; havana_gene "OTTHUMG00000151066.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12069 chr22 HAVANA gene 22868060 22874613 . - . gene_id "ENSG00000169548.3"; transcript_id "ENSG00000169548.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280A"; level 2; havana_gene "OTTHUMG00000030545.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12070 chr22 HAVANA transcript 22868060 22874613 . - . gene_id "ENSG00000169548.3"; transcript_id "ENST00000302097.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280A-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13800.1"; havana_gene "OTTHUMG00000030545.3"; havana_transcript "OTTHUMT00000075433.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12071 chr22 HAVANA exon 22874432 22874613 . - . gene_id "ENSG00000169548.3"; transcript_id "ENST00000302097.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280A-001"; exon_number 1; exon_id "ENSE00001256153.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13800.1"; havana_gene "OTTHUMG00000030545.3"; havana_transcript "OTTHUMT00000075433.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12072 chr22 HAVANA exon 22868060 22870025 . - . gene_id "ENSG00000169548.3"; transcript_id "ENST00000302097.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280A-001"; exon_number 2; exon_id "ENSE00001135391.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13800.1"; havana_gene "OTTHUMG00000030545.3"; havana_transcript "OTTHUMT00000075433.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12073 chr22 HAVANA CDS 22868329 22869954 . - 0 gene_id "ENSG00000169548.3"; transcript_id "ENST00000302097.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280A-001"; exon_number 2; exon_id "ENSE00001135391.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13800.1"; havana_gene "OTTHUMG00000030545.3"; havana_transcript "OTTHUMT00000075433.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12074 chr22 HAVANA start_codon 22869952 22869954 . - 0 gene_id "ENSG00000169548.3"; transcript_id "ENST00000302097.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280A-001"; exon_number 2; exon_id "ENSE00001135391.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13800.1"; havana_gene "OTTHUMG00000030545.3"; havana_transcript "OTTHUMT00000075433.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12075 chr22 HAVANA stop_codon 22868326 22868328 . - 0 gene_id "ENSG00000169548.3"; transcript_id "ENST00000302097.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280A-001"; exon_number 2; exon_id "ENSE00001135391.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13800.1"; havana_gene "OTTHUMG00000030545.3"; havana_transcript "OTTHUMT00000075433.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12076 chr22 HAVANA UTR 22874432 22874613 . - . gene_id "ENSG00000169548.3"; transcript_id "ENST00000302097.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280A-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13800.1"; havana_gene "OTTHUMG00000030545.3"; havana_transcript "OTTHUMT00000075433.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12077 chr22 HAVANA UTR 22868060 22868328 . - . gene_id "ENSG00000169548.3"; transcript_id "ENST00000302097.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280A-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13800.1"; havana_gene "OTTHUMG00000030545.3"; havana_transcript "OTTHUMT00000075433.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12078 chr22 HAVANA UTR 22869955 22870025 . - . gene_id "ENSG00000169548.3"; transcript_id "ENST00000302097.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF280A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF280A-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13800.1"; havana_gene "OTTHUMG00000030545.3"; havana_transcript "OTTHUMT00000075433.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12079 chr22 ENSEMBL gene 22872116 22872211 . + . gene_id "ENSG00000239066.1"; transcript_id "ENSG00000239066.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12080 chr22 ENSEMBL transcript 22872116 22872211 . + . gene_id "ENSG00000239066.1"; transcript_id "ENST00000459485.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.372-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12081 chr22 ENSEMBL exon 22872116 22872211 . + . gene_id "ENSG00000239066.1"; transcript_id "ENST00000459485.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.372-201"; exon_number 1; exon_id "ENSE00001809203.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
12082 chr22 HAVANA gene 22890123 22901768 . - . gene_id "ENSG00000185686.13"; transcript_id "ENSG00000185686.13"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME"; level 2; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12083 chr22 HAVANA transcript 22890123 22901747 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12084 chr22 HAVANA exon 22901582 22901747 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; exon_number 1; exon_id "ENSE00001853437.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12085 chr22 HAVANA exon 22899965 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; exon_number 2; exon_id "ENSE00001534682.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12086 chr22 HAVANA exon 22899232 22899350 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; exon_number 3; exon_id "ENSE00001534670.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12087 chr22 HAVANA CDS 22899232 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; exon_number 3; exon_id "ENSE00001534670.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12088 chr22 HAVANA start_codon 22899250 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; exon_number 3; exon_id "ENSE00001534670.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12089 chr22 HAVANA exon 22893189 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; exon_number 4; exon_id "ENSE00003642784.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12090 chr22 HAVANA CDS 22893189 22893511 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; exon_number 4; exon_id "ENSE00003642784.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12091 chr22 HAVANA exon 22892148 22892756 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; exon_number 5; exon_id "ENSE00003592330.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12092 chr22 HAVANA CDS 22892148 22892756 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; exon_number 5; exon_id "ENSE00003592330.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12093 chr22 HAVANA exon 22890123 22891065 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; exon_number 6; exon_id "ENSE00003669064.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12094 chr22 HAVANA CDS 22890492 22891065 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; exon_number 6; exon_id "ENSE00003669064.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12095 chr22 HAVANA stop_codon 22890489 22890491 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; exon_number 6; exon_id "ENSE00003669064.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12096 chr22 HAVANA UTR 22901582 22901747 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12097 chr22 HAVANA UTR 22899965 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12098 chr22 HAVANA UTR 22899253 22899350 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12099 chr22 HAVANA UTR 22890123 22890491 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398743.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321642.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12100 chr22 HAVANA transcript 22890123 22901768 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000492657.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRAME-002"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321643.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12101 chr22 HAVANA exon 22901582 22901768 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000492657.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRAME-002"; exon_number 1; exon_id "ENSE00001824114.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321643.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12102 chr22 HAVANA exon 22899232 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000492657.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRAME-002"; exon_number 2; exon_id "ENSE00003660177.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321643.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12103 chr22 HAVANA exon 22893189 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000492657.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRAME-002"; exon_number 3; exon_id "ENSE00003576622.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321643.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12104 chr22 HAVANA exon 22892148 22892756 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000492657.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRAME-002"; exon_number 4; exon_id "ENSE00003484145.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321643.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12105 chr22 HAVANA exon 22890123 22891065 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000492657.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRAME-002"; exon_number 5; exon_id "ENSE00003501834.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321643.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12106 chr22 ENSEMBL transcript 22890124 22901696 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12107 chr22 ENSEMBL exon 22901582 22901696 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; exon_number 1; exon_id "ENSE00002288267.1"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12108 chr22 ENSEMBL exon 22899232 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; exon_number 2; exon_id "ENSE00003498498.1"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12109 chr22 ENSEMBL CDS 22899232 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; exon_number 2; exon_id "ENSE00003498498.1"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12110 chr22 ENSEMBL start_codon 22899250 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; exon_number 2; exon_id "ENSE00003498498.1"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12111 chr22 ENSEMBL exon 22893189 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; exon_number 3; exon_id "ENSE00003642784.1"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12112 chr22 ENSEMBL CDS 22893189 22893511 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; exon_number 3; exon_id "ENSE00003642784.1"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12113 chr22 ENSEMBL exon 22892148 22892756 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; exon_number 4; exon_id "ENSE00003592330.1"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12114 chr22 ENSEMBL CDS 22892148 22892756 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; exon_number 4; exon_id "ENSE00003592330.1"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12115 chr22 ENSEMBL exon 22890124 22891065 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; exon_number 5; exon_id "ENSE00001326246.2"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12116 chr22 ENSEMBL CDS 22890492 22891065 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; exon_number 5; exon_id "ENSE00001326246.2"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12117 chr22 ENSEMBL stop_codon 22890489 22890491 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; exon_number 5; exon_id "ENSE00001326246.2"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12118 chr22 ENSEMBL UTR 22901582 22901696 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12119 chr22 ENSEMBL UTR 22899253 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12120 chr22 ENSEMBL UTR 22890124 22890491 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000543184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-204"; level 3; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12121 chr22 HAVANA transcript 22890124 22901550 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12122 chr22 HAVANA exon 22901378 22901550 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; exon_number 1; exon_id "ENSE00001534657.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12123 chr22 HAVANA exon 22899965 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; exon_number 2; exon_id "ENSE00001534682.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12124 chr22 HAVANA exon 22899232 22899350 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; exon_number 3; exon_id "ENSE00001534670.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12125 chr22 HAVANA CDS 22899232 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; exon_number 3; exon_id "ENSE00001534670.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12126 chr22 HAVANA start_codon 22899250 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; exon_number 3; exon_id "ENSE00001534670.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12127 chr22 HAVANA exon 22893189 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; exon_number 4; exon_id "ENSE00003642784.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12128 chr22 HAVANA CDS 22893189 22893511 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; exon_number 4; exon_id "ENSE00003642784.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12129 chr22 HAVANA exon 22892148 22892756 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; exon_number 5; exon_id "ENSE00003592330.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12130 chr22 HAVANA CDS 22892148 22892756 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; exon_number 5; exon_id "ENSE00003592330.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12131 chr22 HAVANA exon 22890124 22891065 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; exon_number 6; exon_id "ENSE00001326246.2"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12132 chr22 HAVANA CDS 22890492 22891065 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; exon_number 6; exon_id "ENSE00001326246.2"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12133 chr22 HAVANA stop_codon 22890489 22890491 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; exon_number 6; exon_id "ENSE00001326246.2"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12134 chr22 HAVANA UTR 22901378 22901550 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12135 chr22 HAVANA UTR 22899965 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12136 chr22 HAVANA UTR 22899253 22899350 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12137 chr22 HAVANA UTR 22890124 22890491 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000398741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-201"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12138 chr22 HAVANA transcript 22890126 22901550 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12139 chr22 HAVANA exon 22901378 22901550 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; exon_number 1; exon_id "ENSE00001534657.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12140 chr22 HAVANA exon 22899965 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; exon_number 2; exon_id "ENSE00001534682.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12141 chr22 HAVANA exon 22899232 22899329 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; exon_number 3; exon_id "ENSE00001555086.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12142 chr22 HAVANA CDS 22899232 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; exon_number 3; exon_id "ENSE00001555086.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12143 chr22 HAVANA start_codon 22899250 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; exon_number 3; exon_id "ENSE00001555086.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12144 chr22 HAVANA exon 22893189 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; exon_number 4; exon_id "ENSE00003642784.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12145 chr22 HAVANA CDS 22893189 22893511 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; exon_number 4; exon_id "ENSE00003642784.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12146 chr22 HAVANA exon 22892148 22892756 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; exon_number 5; exon_id "ENSE00003592330.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12147 chr22 HAVANA CDS 22892148 22892756 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; exon_number 5; exon_id "ENSE00003592330.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12148 chr22 HAVANA exon 22890126 22891065 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; exon_number 6; exon_id "ENSE00001845271.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12149 chr22 HAVANA CDS 22890492 22891065 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; exon_number 6; exon_id "ENSE00001845271.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12150 chr22 HAVANA stop_codon 22890489 22890491 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; exon_number 6; exon_id "ENSE00001845271.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12151 chr22 HAVANA UTR 22901378 22901550 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12152 chr22 HAVANA UTR 22899965 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12153 chr22 HAVANA UTR 22899253 22899329 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12154 chr22 HAVANA UTR 22890126 22890491 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000405655.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-004"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321645.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12155 chr22 ENSEMBL transcript 22890128 22896603 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000539862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-203"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12156 chr22 ENSEMBL exon 22896251 22896603 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000539862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-203"; exon_number 1; exon_id "ENSE00002232748.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12157 chr22 ENSEMBL exon 22893189 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000539862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-203"; exon_number 2; exon_id "ENSE00003534251.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12158 chr22 ENSEMBL CDS 22893189 22893484 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000539862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-203"; exon_number 2; exon_id "ENSE00003534251.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12159 chr22 ENSEMBL start_codon 22893482 22893484 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000539862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-203"; exon_number 2; exon_id "ENSE00003534251.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12160 chr22 ENSEMBL exon 22892148 22892756 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000539862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-203"; exon_number 3; exon_id "ENSE00003592330.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12161 chr22 ENSEMBL CDS 22892148 22892756 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000539862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-203"; exon_number 3; exon_id "ENSE00003592330.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12162 chr22 ENSEMBL exon 22890128 22891065 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000539862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-203"; exon_number 4; exon_id "ENSE00002269823.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12163 chr22 ENSEMBL CDS 22890492 22891065 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000539862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-203"; exon_number 4; exon_id "ENSE00002269823.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12164 chr22 ENSEMBL stop_codon 22890489 22890491 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000539862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-203"; exon_number 4; exon_id "ENSE00002269823.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12165 chr22 ENSEMBL UTR 22896251 22896603 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000539862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-203"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12166 chr22 ENSEMBL UTR 22893485 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000539862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-203"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12167 chr22 ENSEMBL UTR 22890128 22890491 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000539862.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-203"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12168 chr22 HAVANA transcript 22890189 22901695 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12169 chr22 HAVANA exon 22901582 22901695 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; exon_number 1; exon_id "ENSE00001560974.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12170 chr22 HAVANA exon 22899965 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; exon_number 2; exon_id "ENSE00001534682.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12171 chr22 HAVANA exon 22899232 22899329 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; exon_number 3; exon_id "ENSE00001555086.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12172 chr22 HAVANA CDS 22899232 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; exon_number 3; exon_id "ENSE00001555086.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12173 chr22 HAVANA start_codon 22899250 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; exon_number 3; exon_id "ENSE00001555086.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12174 chr22 HAVANA exon 22893189 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; exon_number 4; exon_id "ENSE00003642784.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12175 chr22 HAVANA CDS 22893189 22893511 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; exon_number 4; exon_id "ENSE00003642784.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12176 chr22 HAVANA exon 22892148 22892756 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; exon_number 5; exon_id "ENSE00003592330.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12177 chr22 HAVANA CDS 22892148 22892756 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; exon_number 5; exon_id "ENSE00003592330.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12178 chr22 HAVANA exon 22890189 22891065 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; exon_number 6; exon_id "ENSE00001548257.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12179 chr22 HAVANA CDS 22890492 22891065 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; exon_number 6; exon_id "ENSE00001548257.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12180 chr22 HAVANA stop_codon 22890489 22890491 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; exon_number 6; exon_id "ENSE00001548257.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12181 chr22 HAVANA UTR 22901582 22901695 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12182 chr22 HAVANA UTR 22899965 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12183 chr22 HAVANA UTR 22899253 22899329 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12184 chr22 HAVANA UTR 22890189 22890491 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000402697.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-003"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13801.1"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321644.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12185 chr22 ENSEMBL transcript 22890323 22898347 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000424204.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-202"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12186 chr22 ENSEMBL exon 22898257 22898347 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000424204.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-202"; exon_number 1; exon_id "ENSE00003488794.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12187 chr22 ENSEMBL exon 22893189 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000424204.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-202"; exon_number 2; exon_id "ENSE00003534251.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12188 chr22 ENSEMBL CDS 22893189 22893484 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000424204.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-202"; exon_number 2; exon_id "ENSE00003534251.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12189 chr22 ENSEMBL start_codon 22893482 22893484 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000424204.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-202"; exon_number 2; exon_id "ENSE00003534251.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12190 chr22 ENSEMBL exon 22892148 22892756 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000424204.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-202"; exon_number 3; exon_id "ENSE00003592330.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12191 chr22 ENSEMBL CDS 22892148 22892756 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000424204.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-202"; exon_number 3; exon_id "ENSE00003592330.1"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12192 chr22 ENSEMBL exon 22890323 22891065 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000424204.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-202"; exon_number 4; exon_id "ENSE00001560265.3"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12193 chr22 ENSEMBL CDS 22890492 22891065 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000424204.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-202"; exon_number 4; exon_id "ENSE00001560265.3"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12194 chr22 ENSEMBL stop_codon 22890489 22890491 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000424204.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-202"; exon_number 4; exon_id "ENSE00001560265.3"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12195 chr22 ENSEMBL UTR 22898257 22898347 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000424204.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-202"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12196 chr22 ENSEMBL UTR 22893485 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000424204.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-202"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12197 chr22 ENSEMBL UTR 22890323 22890491 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000424204.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-202"; level 3; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000151172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12198 chr22 HAVANA transcript 22892496 22901686 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000439106.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12199 chr22 HAVANA exon 22901582 22901686 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000439106.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-005"; exon_number 1; exon_id "ENSE00001644016.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12200 chr22 HAVANA exon 22899965 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000439106.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-005"; exon_number 2; exon_id "ENSE00001534682.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12201 chr22 HAVANA exon 22899232 22899397 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000439106.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-005"; exon_number 3; exon_id "ENSE00001671443.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12202 chr22 HAVANA CDS 22899232 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000439106.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-005"; exon_number 3; exon_id "ENSE00001671443.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12203 chr22 HAVANA start_codon 22899250 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000439106.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-005"; exon_number 3; exon_id "ENSE00001671443.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12204 chr22 HAVANA exon 22893189 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000439106.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-005"; exon_number 4; exon_id "ENSE00003642784.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12205 chr22 HAVANA CDS 22893189 22893511 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000439106.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-005"; exon_number 4; exon_id "ENSE00003642784.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12206 chr22 HAVANA exon 22892496 22892756 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000439106.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-005"; exon_number 5; exon_id "ENSE00001610319.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12207 chr22 HAVANA CDS 22892496 22892756 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000439106.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-005"; exon_number 5; exon_id "ENSE00001610319.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12208 chr22 HAVANA UTR 22901582 22901686 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000439106.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12209 chr22 HAVANA UTR 22899965 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000439106.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12210 chr22 HAVANA UTR 22899253 22899397 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000439106.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321646.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12211 chr22 HAVANA transcript 22892605 22898347 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000438888.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRAME-012"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321653.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12212 chr22 HAVANA exon 22898257 22898347 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000438888.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRAME-012"; exon_number 1; exon_id "ENSE00003591448.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321653.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12213 chr22 HAVANA CDS 22898257 22898347 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000438888.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRAME-012"; exon_number 1; exon_id "ENSE00003591448.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321653.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12214 chr22 HAVANA exon 22893189 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000438888.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRAME-012"; exon_number 2; exon_id "ENSE00003642784.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321653.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12215 chr22 HAVANA CDS 22893189 22893511 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000438888.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRAME-012"; exon_number 2; exon_id "ENSE00003642784.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321653.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12216 chr22 HAVANA exon 22892605 22892756 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000438888.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRAME-012"; exon_number 3; exon_id "ENSE00001719356.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321653.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12217 chr22 HAVANA CDS 22892605 22892756 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000438888.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRAME-012"; exon_number 3; exon_id "ENSE00001719356.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321653.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12218 chr22 HAVANA transcript 22892643 22901490 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000420709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-008"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12219 chr22 HAVANA exon 22901378 22901490 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000420709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-008"; exon_number 1; exon_id "ENSE00001592373.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12220 chr22 HAVANA exon 22899965 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000420709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-008"; exon_number 2; exon_id "ENSE00001534682.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12221 chr22 HAVANA exon 22899232 22899350 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000420709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-008"; exon_number 3; exon_id "ENSE00001534670.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12222 chr22 HAVANA CDS 22899232 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000420709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-008"; exon_number 3; exon_id "ENSE00001534670.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12223 chr22 HAVANA start_codon 22899250 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000420709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-008"; exon_number 3; exon_id "ENSE00001534670.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12224 chr22 HAVANA exon 22893189 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000420709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-008"; exon_number 4; exon_id "ENSE00003642784.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12225 chr22 HAVANA CDS 22893189 22893511 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000420709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-008"; exon_number 4; exon_id "ENSE00003642784.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12226 chr22 HAVANA exon 22892643 22892756 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000420709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-008"; exon_number 5; exon_id "ENSE00001663895.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12227 chr22 HAVANA CDS 22892643 22892756 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000420709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-008"; exon_number 5; exon_id "ENSE00001663895.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12228 chr22 HAVANA UTR 22901378 22901490 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000420709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-008"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12229 chr22 HAVANA UTR 22899965 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000420709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-008"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12230 chr22 HAVANA UTR 22899253 22899350 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000420709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-008"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321649.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12231 chr22 HAVANA transcript 22892668 22900141 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000476336.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAME-010"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321651.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12232 chr22 HAVANA exon 22899965 22900141 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000476336.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAME-010"; exon_number 1; exon_id "ENSE00001885987.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321651.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12233 chr22 HAVANA exon 22893189 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000476336.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAME-010"; exon_number 2; exon_id "ENSE00003576622.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321651.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12234 chr22 HAVANA exon 22892668 22892756 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000476336.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAME-010"; exon_number 3; exon_id "ENSE00001837868.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321651.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12235 chr22 HAVANA transcript 22892721 22896600 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000485532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAME-013"; level 2; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12236 chr22 HAVANA exon 22896251 22896600 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000485532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAME-013"; exon_number 1; exon_id "ENSE00001814115.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12237 chr22 HAVANA exon 22893189 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000485532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAME-013"; exon_number 2; exon_id "ENSE00003576622.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12238 chr22 HAVANA exon 22892721 22892756 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000485532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRAME-013"; exon_number 3; exon_id "ENSE00001837673.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321654.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12239 chr22 HAVANA transcript 22893176 22901674 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000406503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-006"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12240 chr22 HAVANA exon 22901582 22901674 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000406503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-006"; exon_number 1; exon_id "ENSE00001550349.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12241 chr22 HAVANA exon 22899965 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000406503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-006"; exon_number 2; exon_id "ENSE00001534682.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12242 chr22 HAVANA exon 22899232 22899506 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000406503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-006"; exon_number 3; exon_id "ENSE00001555030.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12243 chr22 HAVANA CDS 22899232 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000406503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-006"; exon_number 3; exon_id "ENSE00001555030.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12244 chr22 HAVANA start_codon 22899250 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000406503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-006"; exon_number 3; exon_id "ENSE00001555030.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12245 chr22 HAVANA exon 22893176 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000406503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-006"; exon_number 4; exon_id "ENSE00001558554.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12246 chr22 HAVANA CDS 22893188 22893511 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000406503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-006"; exon_number 4; exon_id "ENSE00001558554.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12247 chr22 HAVANA stop_codon 22893185 22893187 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000406503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-006"; exon_number 4; exon_id "ENSE00001558554.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12248 chr22 HAVANA UTR 22901582 22901674 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000406503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-006"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12249 chr22 HAVANA UTR 22899965 22900000 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000406503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-006"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12250 chr22 HAVANA UTR 22899253 22899506 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000406503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-006"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12251 chr22 HAVANA UTR 22893176 22893187 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000406503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-006"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321647.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12252 chr22 HAVANA transcript 22893241 22900012 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000442481.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRAME-011"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12253 chr22 HAVANA exon 22899965 22900012 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000442481.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRAME-011"; exon_number 1; exon_id "ENSE00001781135.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12254 chr22 HAVANA exon 22899232 22899350 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000442481.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRAME-011"; exon_number 2; exon_id "ENSE00001534670.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12255 chr22 HAVANA CDS 22899232 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000442481.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRAME-011"; exon_number 2; exon_id "ENSE00001534670.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12256 chr22 HAVANA start_codon 22899250 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000442481.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRAME-011"; exon_number 2; exon_id "ENSE00001534670.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12257 chr22 HAVANA exon 22895230 22895372 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000442481.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRAME-011"; exon_number 3; exon_id "ENSE00001639210.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12258 chr22 HAVANA CDS 22895230 22895372 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000442481.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRAME-011"; exon_number 3; exon_id "ENSE00001639210.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12259 chr22 HAVANA exon 22893241 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000442481.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRAME-011"; exon_number 4; exon_id "ENSE00001617776.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12260 chr22 HAVANA CDS 22893484 22893511 . - 1 gene_id "ENSG00000185686.13"; transcript_id "ENST00000442481.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRAME-011"; exon_number 4; exon_id "ENSE00001617776.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12261 chr22 HAVANA stop_codon 22893481 22893483 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000442481.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRAME-011"; exon_number 4; exon_id "ENSE00001617776.1"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12262 chr22 HAVANA UTR 22899965 22900012 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000442481.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRAME-011"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12263 chr22 HAVANA UTR 22899253 22899350 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000442481.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRAME-011"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12264 chr22 HAVANA UTR 22893241 22893483 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000442481.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRAME-011"; level 2; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321652.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12265 chr22 HAVANA transcript 22893274 22900174 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000403441.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321650.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12266 chr22 HAVANA exon 22899965 22900174 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000403441.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-009"; exon_number 1; exon_id "ENSE00001551814.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321650.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12267 chr22 HAVANA exon 22899232 22899350 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000403441.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-009"; exon_number 2; exon_id "ENSE00001534670.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321650.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12268 chr22 HAVANA CDS 22899232 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000403441.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-009"; exon_number 2; exon_id "ENSE00001534670.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321650.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12269 chr22 HAVANA start_codon 22899250 22899252 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000403441.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-009"; exon_number 2; exon_id "ENSE00001534670.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321650.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12270 chr22 HAVANA exon 22893274 22893511 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000403441.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-009"; exon_number 3; exon_id "ENSE00001553407.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321650.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12271 chr22 HAVANA CDS 22893277 22893511 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000403441.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-009"; exon_number 3; exon_id "ENSE00001553407.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321650.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12272 chr22 HAVANA stop_codon 22893274 22893276 . - 0 gene_id "ENSG00000185686.13"; transcript_id "ENST00000403441.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-009"; exon_number 3; exon_id "ENSE00001553407.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321650.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12273 chr22 HAVANA UTR 22899965 22900174 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000403441.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321650.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12274 chr22 HAVANA UTR 22899253 22899350 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000403441.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321650.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12275 chr22 HAVANA UTR 22893274 22893276 . - . gene_id "ENSG00000185686.13"; transcript_id "ENST00000403441.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRAME"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRAME-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000151172.1"; havana_transcript "OTTHUMT00000321650.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12276 chr22 HAVANA gene 22901750 22909007 . + . gene_id "ENSG00000220891.1"; transcript_id "ENSG00000220891.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "LL22NC03-63E9.3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LL22NC03-63E9.3"; level 1; havana_gene "OTTHUMG00000151164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12277 chr22 HAVANA transcript 22901750 22909007 . + . gene_id "ENSG00000220891.1"; transcript_id "ENST00000407120.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "LL22NC03-63E9.3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LL22NC03-63E9.3-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000151164.1"; havana_transcript "OTTHUMT00000321633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12278 chr22 HAVANA exon 22901750 22901814 . + . gene_id "ENSG00000220891.1"; transcript_id "ENST00000407120.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "LL22NC03-63E9.3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LL22NC03-63E9.3-001"; exon_number 1; exon_id "ENSE00001562086.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000151164.1"; havana_transcript "OTTHUMT00000321633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12279 chr22 HAVANA CDS 22901775 22901814 . + 0 gene_id "ENSG00000220891.1"; transcript_id "ENST00000407120.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "LL22NC03-63E9.3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LL22NC03-63E9.3-001"; exon_number 1; exon_id "ENSE00001562086.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000151164.1"; havana_transcript "OTTHUMT00000321633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12280 chr22 HAVANA start_codon 22901775 22901777 . + 0 gene_id "ENSG00000220891.1"; transcript_id "ENST00000407120.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "LL22NC03-63E9.3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LL22NC03-63E9.3-001"; exon_number 1; exon_id "ENSE00001562086.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000151164.1"; havana_transcript "OTTHUMT00000321633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12281 chr22 HAVANA exon 22905268 22905377 . + . gene_id "ENSG00000220891.1"; transcript_id "ENST00000407120.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "LL22NC03-63E9.3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LL22NC03-63E9.3-001"; exon_number 2; exon_id "ENSE00001560654.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000151164.1"; havana_transcript "OTTHUMT00000321633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12282 chr22 HAVANA CDS 22905268 22905377 . + 2 gene_id "ENSG00000220891.1"; transcript_id "ENST00000407120.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "LL22NC03-63E9.3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LL22NC03-63E9.3-001"; exon_number 2; exon_id "ENSE00001560654.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000151164.1"; havana_transcript "OTTHUMT00000321633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12283 chr22 HAVANA exon 22906072 22909007 . + . gene_id "ENSG00000220891.1"; transcript_id "ENST00000407120.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "LL22NC03-63E9.3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LL22NC03-63E9.3-001"; exon_number 3; exon_id "ENSE00001548086.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000151164.1"; havana_transcript "OTTHUMT00000321633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12284 chr22 HAVANA CDS 22906072 22906218 . + 0 gene_id "ENSG00000220891.1"; transcript_id "ENST00000407120.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "LL22NC03-63E9.3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LL22NC03-63E9.3-001"; exon_number 3; exon_id "ENSE00001548086.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000151164.1"; havana_transcript "OTTHUMT00000321633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12285 chr22 HAVANA stop_codon 22906219 22906221 . + 0 gene_id "ENSG00000220891.1"; transcript_id "ENST00000407120.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "LL22NC03-63E9.3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LL22NC03-63E9.3-001"; exon_number 3; exon_id "ENSE00001548086.1"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000151164.1"; havana_transcript "OTTHUMT00000321633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12286 chr22 HAVANA UTR 22901750 22901774 . + . gene_id "ENSG00000220891.1"; transcript_id "ENST00000407120.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "LL22NC03-63E9.3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LL22NC03-63E9.3-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000151164.1"; havana_transcript "OTTHUMT00000321633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12287 chr22 HAVANA UTR 22906219 22909007 . + . gene_id "ENSG00000220891.1"; transcript_id "ENST00000407120.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "LL22NC03-63E9.3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LL22NC03-63E9.3-001"; level 1; tag "basic"; tag "appris_principal"; tag "exp_conf"; havana_gene "OTTHUMG00000151164.1"; havana_transcript "OTTHUMT00000321633.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12288 chr22 HAVANA gene 22922478 22922760 . + . gene_id "ENSG00000253120.1"; transcript_id "ENSG00000253120.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV2-34"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV2-34"; level 2; havana_gene "OTTHUMG00000151174.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12289 chr22 HAVANA transcript 22922478 22922760 . + . gene_id "ENSG00000253120.1"; transcript_id "ENST00000490007.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV2-34"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV2-34-001"; level 2; havana_gene "OTTHUMG00000151174.2"; havana_transcript "OTTHUMT00000321658.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12290 chr22 HAVANA exon 22922478 22922760 . + . gene_id "ENSG00000253120.1"; transcript_id "ENST00000490007.2"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV2-34"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV2-34-001"; exon_number 1; exon_id "ENSE00001910523.2"; level 2; havana_gene "OTTHUMG00000151174.2"; havana_transcript "OTTHUMT00000321658.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12291 chr22 HAVANA gene 22930626 22931145 . + . gene_id "ENSG00000211656.2"; transcript_id "ENSG00000211656.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-33"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-33"; level 2; havana_gene "OTTHUMG00000151178.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12292 chr22 HAVANA transcript 22930626 22931145 . + . gene_id "ENSG00000211656.2"; transcript_id "ENST00000390302.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-33"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-33-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151178.2"; havana_transcript "OTTHUMT00000321664.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12293 chr22 HAVANA exon 22930626 22930729 . + . gene_id "ENSG00000211656.2"; transcript_id "ENST00000390302.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-33"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-33-001"; exon_number 1; exon_id "ENSE00001853964.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151178.2"; havana_transcript "OTTHUMT00000321664.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12294 chr22 HAVANA CDS 22930684 22930729 . + 0 gene_id "ENSG00000211656.2"; transcript_id "ENST00000390302.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-33"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-33-001"; exon_number 1; exon_id "ENSE00001853964.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151178.2"; havana_transcript "OTTHUMT00000321664.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12295 chr22 HAVANA start_codon 22930684 22930686 . + 0 gene_id "ENSG00000211656.2"; transcript_id "ENST00000390302.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-33"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-33-001"; exon_number 1; exon_id "ENSE00001853964.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151178.2"; havana_transcript "OTTHUMT00000321664.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12296 chr22 HAVANA exon 22930852 22931145 . + . gene_id "ENSG00000211656.2"; transcript_id "ENST00000390302.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-33"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-33-001"; exon_number 2; exon_id "ENSE00001923962.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151178.2"; havana_transcript "OTTHUMT00000321664.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12297 chr22 HAVANA CDS 22930852 22931145 . + 2 gene_id "ENSG00000211656.2"; transcript_id "ENST00000390302.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-33"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-33-001"; exon_number 2; exon_id "ENSE00001923962.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151178.2"; havana_transcript "OTTHUMT00000321664.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12298 chr22 HAVANA UTR 22930626 22930683 . + . gene_id "ENSG00000211656.2"; transcript_id "ENST00000390302.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-33"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-33-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151178.2"; havana_transcript "OTTHUMT00000321664.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12299 chr22 HAVANA gene 22936998 22937501 . + . gene_id "ENSG00000211657.2"; transcript_id "ENSG00000211657.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-32"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-32"; level 2; havana_gene "OTTHUMG00000151166.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12300 chr22 HAVANA transcript 22936998 22937501 . + . gene_id "ENSG00000211657.2"; transcript_id "ENST00000390303.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-32"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-32-001"; level 2; tag "non_canonical_conserved"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151166.2"; havana_transcript "OTTHUMT00000321635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12301 chr22 HAVANA exon 22936998 22937079 . + . gene_id "ENSG00000211657.2"; transcript_id "ENST00000390303.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-32"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-32-001"; exon_number 1; exon_id "ENSE00001915305.1"; level 2; tag "non_canonical_conserved"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151166.2"; havana_transcript "OTTHUMT00000321635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12302 chr22 HAVANA CDS 22937037 22937079 . + 0 gene_id "ENSG00000211657.2"; transcript_id "ENST00000390303.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-32"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-32-001"; exon_number 1; exon_id "ENSE00001915305.1"; level 2; tag "non_canonical_conserved"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151166.2"; havana_transcript "OTTHUMT00000321635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12303 chr22 HAVANA start_codon 22937037 22937039 . + 0 gene_id "ENSG00000211657.2"; transcript_id "ENST00000390303.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-32"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-32-001"; exon_number 1; exon_id "ENSE00001915305.1"; level 2; tag "non_canonical_conserved"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151166.2"; havana_transcript "OTTHUMT00000321635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12304 chr22 HAVANA exon 22937226 22937501 . + . gene_id "ENSG00000211657.2"; transcript_id "ENST00000390303.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-32"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-32-001"; exon_number 2; exon_id "ENSE00001507790.2"; level 2; tag "non_canonical_conserved"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151166.2"; havana_transcript "OTTHUMT00000321635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12305 chr22 HAVANA CDS 22937226 22937501 . + 2 gene_id "ENSG00000211657.2"; transcript_id "ENST00000390303.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-32"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-32-001"; exon_number 2; exon_id "ENSE00001507790.2"; level 2; tag "non_canonical_conserved"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151166.2"; havana_transcript "OTTHUMT00000321635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12306 chr22 HAVANA UTR 22936998 22937036 . + . gene_id "ENSG00000211657.2"; transcript_id "ENST00000390303.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-32"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-32-001"; level 2; tag "non_canonical_conserved"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151166.2"; havana_transcript "OTTHUMT00000321635.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12307 chr22 HAVANA gene 22946915 22947635 . + . gene_id "ENSG00000253920.1"; transcript_id "ENSG00000253920.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-31"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-31"; level 2; havana_gene "OTTHUMG00000151179.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12308 chr22 HAVANA transcript 22946915 22947635 . + . gene_id "ENSG00000253920.1"; transcript_id "ENST00000523713.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-31"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-31-001"; level 2; havana_gene "OTTHUMG00000151179.1"; havana_transcript "OTTHUMT00000321665.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12309 chr22 HAVANA exon 22946915 22946950 . + . gene_id "ENSG00000253920.1"; transcript_id "ENST00000523713.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-31"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-31-001"; exon_number 1; exon_id "ENSE00002120725.1"; level 2; havana_gene "OTTHUMG00000151179.1"; havana_transcript "OTTHUMT00000321665.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12310 chr22 HAVANA exon 22947375 22947635 . + . gene_id "ENSG00000253920.1"; transcript_id "ENST00000523713.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-31"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-31-001"; exon_number 2; exon_id "ENSE00002091953.1"; level 2; havana_gene "OTTHUMG00000151179.1"; havana_transcript "OTTHUMT00000321665.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12311 chr22 HAVANA gene 22961042 22961633 . + . gene_id "ENSG00000253329.1"; transcript_id "ENSG00000253329.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-30"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-30"; level 2; havana_gene "OTTHUMG00000151182.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12312 chr22 HAVANA transcript 22961042 22961633 . + . gene_id "ENSG00000253329.1"; transcript_id "ENST00000524362.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-30"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-30-001"; level 2; havana_gene "OTTHUMG00000151182.1"; havana_transcript "OTTHUMT00000321668.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12313 chr22 HAVANA exon 22961042 22961081 . + . gene_id "ENSG00000253329.1"; transcript_id "ENST00000524362.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-30"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-30-001"; exon_number 1; exon_id "ENSE00002138235.1"; level 2; havana_gene "OTTHUMG00000151182.1"; havana_transcript "OTTHUMT00000321668.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12314 chr22 HAVANA exon 22961376 22961633 . + . gene_id "ENSG00000253329.1"; transcript_id "ENST00000524362.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-30"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-30-001"; exon_number 2; exon_id "ENSE00002126877.1"; level 2; havana_gene "OTTHUMG00000151182.1"; havana_transcript "OTTHUMT00000321668.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12315 chr22 HAVANA gene 22972532 22978624 . + . gene_id "ENSG00000215456.5"; transcript_id "ENSG00000215456.5"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP4"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP4"; level 2; havana_gene "OTTHUMG00000151175.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12316 chr22 HAVANA transcript 22972532 22978624 . + . gene_id "ENSG00000215456.5"; transcript_id "ENST00000506079.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP4-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151175.1"; havana_transcript "OTTHUMT00000321659.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12317 chr22 HAVANA exon 22972532 22972606 . + . gene_id "ENSG00000215456.5"; transcript_id "ENST00000506079.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP4-001"; exon_number 1; exon_id "ENSE00002041116.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151175.1"; havana_transcript "OTTHUMT00000321659.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12318 chr22 HAVANA exon 22973432 22973542 . + . gene_id "ENSG00000215456.5"; transcript_id "ENST00000506079.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP4-001"; exon_number 2; exon_id "ENSE00002037522.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151175.1"; havana_transcript "OTTHUMT00000321659.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12319 chr22 HAVANA exon 22974793 22974933 . + . gene_id "ENSG00000215456.5"; transcript_id "ENST00000506079.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP4-001"; exon_number 3; exon_id "ENSE00002061657.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151175.1"; havana_transcript "OTTHUMT00000321659.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12320 chr22 HAVANA exon 22975988 22976122 . + . gene_id "ENSG00000215456.5"; transcript_id "ENST00000506079.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP4-001"; exon_number 4; exon_id "ENSE00002085932.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151175.1"; havana_transcript "OTTHUMT00000321659.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12321 chr22 HAVANA exon 22977068 22977173 . + . gene_id "ENSG00000215456.5"; transcript_id "ENST00000506079.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP4-001"; exon_number 5; exon_id "ENSE00002084408.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151175.1"; havana_transcript "OTTHUMT00000321659.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12322 chr22 HAVANA exon 22977652 22977814 . + . gene_id "ENSG00000215456.5"; transcript_id "ENST00000506079.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP4-001"; exon_number 6; exon_id "ENSE00002080607.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151175.1"; havana_transcript "OTTHUMT00000321659.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12323 chr22 HAVANA exon 22978530 22978624 . + . gene_id "ENSG00000215456.5"; transcript_id "ENST00000506079.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP4-001"; exon_number 7; exon_id "ENSE00002033679.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151175.1"; havana_transcript "OTTHUMT00000321659.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12324 chr22 HAVANA gene 22981648 22986944 . - . gene_id "ENSG00000183169.6"; transcript_id "ENSG00000183169.6"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L1P"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L1P"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000151169.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12325 chr22 HAVANA transcript 22981648 22986944 . - . gene_id "ENSG00000183169.6"; transcript_id "ENST00000402027.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L1P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L1P-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000151169.2"; havana_transcript "OTTHUMT00000468457.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12326 chr22 HAVANA exon 22985163 22986944 . - . gene_id "ENSG00000183169.6"; transcript_id "ENST00000402027.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L1P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L1P-002"; exon_number 1; exon_id "ENSE00001558433.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000151169.2"; havana_transcript "OTTHUMT00000468457.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12327 chr22 HAVANA exon 22981648 22981799 . - . gene_id "ENSG00000183169.6"; transcript_id "ENST00000402027.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L1P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L1P-002"; exon_number 2; exon_id "ENSE00001547472.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000151169.2"; havana_transcript "OTTHUMT00000468457.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12328 chr22 HAVANA transcript 22984722 22986556 . - . gene_id "ENSG00000183169.6"; transcript_id "ENST00000605258.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L1P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L1P-001"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000151169.2"; havana_transcript "OTTHUMT00000321638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12329 chr22 HAVANA exon 22984722 22986556 . - . gene_id "ENSG00000183169.6"; transcript_id "ENST00000605258.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L1P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L1P-001"; exon_number 1; exon_id "ENSE00003515143.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000151169.2"; havana_transcript "OTTHUMT00000321638.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12330 chr22 HAVANA gene 22988780 22990368 . + . gene_id "ENSG00000100121.8"; transcript_id "ENSG00000100121.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2"; level 2; havana_gene "OTTHUMG00000151177.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12331 chr22 HAVANA transcript 22988780 22990368 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000417145.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GGTLC2-002"; level 2; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321663.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12332 chr22 HAVANA exon 22988780 22988991 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000417145.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GGTLC2-002"; exon_number 1; exon_id "ENSE00001908857.1"; level 2; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321663.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12333 chr22 HAVANA exon 22989224 22989351 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000417145.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GGTLC2-002"; exon_number 2; exon_id "ENSE00003625938.1"; level 2; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321663.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12334 chr22 HAVANA exon 22989453 22989760 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000417145.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GGTLC2-002"; exon_number 3; exon_id "ENSE00001816337.1"; level 2; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321663.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12335 chr22 HAVANA exon 22990065 22990368 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000417145.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GGTLC2-002"; exon_number 4; exon_id "ENSE00001719064.1"; level 2; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321663.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12336 chr22 HAVANA transcript 22988816 22990211 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000480559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-001"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321662.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12337 chr22 HAVANA exon 22988816 22988991 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000480559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-001"; exon_number 1; exon_id "ENSE00001649212.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321662.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12338 chr22 HAVANA CDS 22988816 22988991 . + 0 gene_id "ENSG00000100121.8"; transcript_id "ENST00000480559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-001"; exon_number 1; exon_id "ENSE00001649212.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321662.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12339 chr22 HAVANA start_codon 22988816 22988818 . + 0 gene_id "ENSG00000100121.8"; transcript_id "ENST00000480559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-001"; exon_number 1; exon_id "ENSE00001649212.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321662.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12340 chr22 HAVANA exon 22989224 22989351 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000480559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-001"; exon_number 2; exon_id "ENSE00003672221.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321662.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12341 chr22 HAVANA CDS 22989224 22989351 . + 1 gene_id "ENSG00000100121.8"; transcript_id "ENST00000480559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-001"; exon_number 2; exon_id "ENSE00003672221.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321662.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12342 chr22 HAVANA exon 22989453 22989508 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000480559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-001"; exon_number 3; exon_id "ENSE00001670430.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321662.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12343 chr22 HAVANA CDS 22989453 22989508 . + 2 gene_id "ENSG00000100121.8"; transcript_id "ENST00000480559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-001"; exon_number 3; exon_id "ENSE00001670430.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321662.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12344 chr22 HAVANA exon 22989611 22989760 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000480559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-001"; exon_number 4; exon_id "ENSE00001660620.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321662.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12345 chr22 HAVANA CDS 22989611 22989760 . + 0 gene_id "ENSG00000100121.8"; transcript_id "ENST00000480559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-001"; exon_number 4; exon_id "ENSE00001660620.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321662.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12346 chr22 HAVANA exon 22990065 22990211 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000480559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-001"; exon_number 5; exon_id "ENSE00001596910.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321662.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12347 chr22 HAVANA CDS 22990065 22990208 . + 0 gene_id "ENSG00000100121.8"; transcript_id "ENST00000480559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-001"; exon_number 5; exon_id "ENSE00001596910.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321662.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12348 chr22 HAVANA stop_codon 22990209 22990211 . + 0 gene_id "ENSG00000100121.8"; transcript_id "ENST00000480559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-001"; exon_number 5; exon_id "ENSE00001596910.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321662.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12349 chr22 HAVANA UTR 22990209 22990211 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000480559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-001"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000321662.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12350 chr22 HAVANA transcript 22988816 22990211 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000448514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-003"; level 2; tag "non_canonical_polymorphism"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000335009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12351 chr22 HAVANA exon 22988816 22988991 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000448514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-003"; exon_number 1; exon_id "ENSE00001649212.1"; level 2; tag "non_canonical_polymorphism"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000335009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12352 chr22 HAVANA CDS 22988816 22988991 . + 0 gene_id "ENSG00000100121.8"; transcript_id "ENST00000448514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-003"; exon_number 1; exon_id "ENSE00001649212.1"; level 2; tag "non_canonical_polymorphism"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000335009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12353 chr22 HAVANA start_codon 22988816 22988818 . + 0 gene_id "ENSG00000100121.8"; transcript_id "ENST00000448514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-003"; exon_number 1; exon_id "ENSE00001649212.1"; level 2; tag "non_canonical_polymorphism"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000335009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12354 chr22 HAVANA exon 22989224 22989351 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000448514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-003"; exon_number 2; exon_id "ENSE00003672221.1"; level 2; tag "non_canonical_polymorphism"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000335009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12355 chr22 HAVANA CDS 22989224 22989351 . + 1 gene_id "ENSG00000100121.8"; transcript_id "ENST00000448514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-003"; exon_number 2; exon_id "ENSE00003672221.1"; level 2; tag "non_canonical_polymorphism"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000335009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12356 chr22 HAVANA exon 22989453 22989565 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000448514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-003"; exon_number 3; exon_id "ENSE00001599590.1"; level 2; tag "non_canonical_polymorphism"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000335009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12357 chr22 HAVANA CDS 22989453 22989565 . + 2 gene_id "ENSG00000100121.8"; transcript_id "ENST00000448514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-003"; exon_number 3; exon_id "ENSE00001599590.1"; level 2; tag "non_canonical_polymorphism"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000335009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12358 chr22 HAVANA exon 22989647 22989760 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000448514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-003"; exon_number 4; exon_id "ENSE00001624041.1"; level 2; tag "non_canonical_polymorphism"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000335009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12359 chr22 HAVANA CDS 22989647 22989760 . + 0 gene_id "ENSG00000100121.8"; transcript_id "ENST00000448514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-003"; exon_number 4; exon_id "ENSE00001624041.1"; level 2; tag "non_canonical_polymorphism"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000335009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12360 chr22 HAVANA exon 22990065 22990211 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000448514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-003"; exon_number 5; exon_id "ENSE00001596910.1"; level 2; tag "non_canonical_polymorphism"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000335009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12361 chr22 HAVANA CDS 22990065 22990208 . + 0 gene_id "ENSG00000100121.8"; transcript_id "ENST00000448514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-003"; exon_number 5; exon_id "ENSE00001596910.1"; level 2; tag "non_canonical_polymorphism"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000335009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12362 chr22 HAVANA stop_codon 22990209 22990211 . + 0 gene_id "ENSG00000100121.8"; transcript_id "ENST00000448514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-003"; exon_number 5; exon_id "ENSE00001596910.1"; level 2; tag "non_canonical_polymorphism"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000335009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12363 chr22 HAVANA UTR 22990209 22990211 . + . gene_id "ENSG00000100121.8"; transcript_id "ENST00000448514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGTLC2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGTLC2-003"; level 2; tag "non_canonical_polymorphism"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13802.2"; havana_gene "OTTHUMG00000151177.2"; havana_transcript "OTTHUMT00000335009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12364 chr22 HAVANA gene 23003769 23004012 . + . gene_id "ENSG00000253338.1"; transcript_id "ENSG00000253338.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-29"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-29"; level 2; havana_gene "OTTHUMG00000151168.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12365 chr22 HAVANA transcript 23003769 23004012 . + . gene_id "ENSG00000253338.1"; transcript_id "ENST00000520084.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-29"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-29-001"; level 2; havana_gene "OTTHUMG00000151168.1"; havana_transcript "OTTHUMT00000321637.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12366 chr22 HAVANA exon 23003769 23004012 . + . gene_id "ENSG00000253338.1"; transcript_id "ENST00000520084.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-29"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-29-001"; exon_number 1; exon_id "ENSE00002114352.1"; level 2; havana_gene "OTTHUMG00000151168.1"; havana_transcript "OTTHUMT00000321637.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12367 chr22 ENSEMBL gene 23006898 23006993 . + . gene_id "ENSG00000207834.1"; transcript_id "ENSG00000207834.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D86994.2"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D86994.2"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12368 chr22 ENSEMBL transcript 23006898 23006993 . + . gene_id "ENSG00000207834.1"; transcript_id "ENST00000385099.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D86994.2"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D86994.2-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12369 chr22 ENSEMBL exon 23006898 23006993 . + . gene_id "ENSG00000207834.1"; transcript_id "ENST00000385099.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D86994.2"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D86994.2-201"; exon_number 1; exon_id "ENSE00001808914.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12370 chr22 HAVANA gene 23006943 23007377 . + . gene_id "ENSG00000253451.1"; transcript_id "ENSG00000253451.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV2-28"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV2-28"; level 2; havana_gene "OTTHUMG00000151183.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12371 chr22 HAVANA transcript 23006943 23007377 . + . gene_id "ENSG00000253451.1"; transcript_id "ENST00000520681.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV2-28"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV2-28-001"; level 2; havana_gene "OTTHUMG00000151183.1"; havana_transcript "OTTHUMT00000321669.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12372 chr22 HAVANA exon 23006943 23006988 . + . gene_id "ENSG00000253451.1"; transcript_id "ENST00000520681.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV2-28"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV2-28-001"; exon_number 1; exon_id "ENSE00002136323.1"; level 2; havana_gene "OTTHUMG00000151183.1"; havana_transcript "OTTHUMT00000321669.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12373 chr22 HAVANA exon 23007120 23007377 . + . gene_id "ENSG00000253451.1"; transcript_id "ENST00000520681.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV2-28"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV2-28-001"; exon_number 2; exon_id "ENSE00002132919.1"; level 2; havana_gene "OTTHUMG00000151183.1"; havana_transcript "OTTHUMT00000321669.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12374 chr22 HAVANA gene 23010758 23011276 . + . gene_id "ENSG00000211658.2"; transcript_id "ENSG00000211658.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-27"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-27"; level 2; havana_gene "OTTHUMG00000151171.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12375 chr22 HAVANA transcript 23010758 23011276 . + . gene_id "ENSG00000211658.2"; transcript_id "ENST00000390304.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-27"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-27-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151171.1"; havana_transcript "OTTHUMT00000321641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12376 chr22 HAVANA exon 23010758 23010841 . + . gene_id "ENSG00000211658.2"; transcript_id "ENST00000390304.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-27"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-27-001"; exon_number 1; exon_id "ENSE00001955378.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151171.1"; havana_transcript "OTTHUMT00000321641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12377 chr22 HAVANA CDS 23010796 23010841 . + 0 gene_id "ENSG00000211658.2"; transcript_id "ENST00000390304.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-27"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-27-001"; exon_number 1; exon_id "ENSE00001955378.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151171.1"; havana_transcript "OTTHUMT00000321641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12378 chr22 HAVANA start_codon 23010796 23010798 . + 0 gene_id "ENSG00000211658.2"; transcript_id "ENST00000390304.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-27"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-27-001"; exon_number 1; exon_id "ENSE00001955378.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151171.1"; havana_transcript "OTTHUMT00000321641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12379 chr22 HAVANA exon 23010984 23011276 . + . gene_id "ENSG00000211658.2"; transcript_id "ENST00000390304.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-27"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-27-001"; exon_number 2; exon_id "ENSE00001507791.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151171.1"; havana_transcript "OTTHUMT00000321641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12380 chr22 HAVANA CDS 23010984 23011276 . + 2 gene_id "ENSG00000211658.2"; transcript_id "ENST00000390304.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-27"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-27-001"; exon_number 2; exon_id "ENSE00001507791.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151171.1"; havana_transcript "OTTHUMT00000321641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12381 chr22 HAVANA UTR 23010758 23010795 . + . gene_id "ENSG00000211658.2"; transcript_id "ENST00000390304.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-27"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-27-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151171.1"; havana_transcript "OTTHUMT00000321641.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12382 chr22 HAVANA gene 23015622 23016072 . + . gene_id "ENSG00000253913.1"; transcript_id "ENSG00000253913.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-26"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-26"; level 2; havana_gene "OTTHUMG00000151211.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12383 chr22 HAVANA transcript 23015622 23016072 . + . gene_id "ENSG00000253913.1"; transcript_id "ENST00000520756.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-26"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-26-001"; level 2; havana_gene "OTTHUMG00000151211.1"; havana_transcript "OTTHUMT00000321815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12384 chr22 HAVANA exon 23015622 23015679 . + . gene_id "ENSG00000253913.1"; transcript_id "ENST00000520756.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-26"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-26-001"; exon_number 1; exon_id "ENSE00002137717.1"; level 2; havana_gene "OTTHUMG00000151211.1"; havana_transcript "OTTHUMT00000321815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12385 chr22 HAVANA exon 23015829 23016072 . + . gene_id "ENSG00000253913.1"; transcript_id "ENST00000520756.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-26"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-26-001"; exon_number 2; exon_id "ENSE00002111672.1"; level 2; havana_gene "OTTHUMG00000151211.1"; havana_transcript "OTTHUMT00000321815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12386 chr22 HAVANA gene 23021570 23021818 . + . gene_id "ENSG00000253779.1"; transcript_id "ENSG00000253779.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVVI-25-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVVI-25-1"; level 2; havana_gene "OTTHUMG00000151586.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12387 chr22 HAVANA transcript 23021570 23021818 . + . gene_id "ENSG00000253779.1"; transcript_id "ENST00000521893.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVVI-25-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVVI-25-1-001"; level 2; havana_gene "OTTHUMG00000151586.1"; havana_transcript "OTTHUMT00000323196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12388 chr22 HAVANA exon 23021570 23021818 . + . gene_id "ENSG00000253779.1"; transcript_id "ENST00000521893.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVVI-25-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVVI-25-1-001"; exon_number 1; exon_id "ENSE00002109572.1"; level 2; havana_gene "OTTHUMG00000151586.1"; havana_transcript "OTTHUMT00000323196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12389 chr22 HAVANA gene 23029190 23029735 . + . gene_id "ENSG00000211659.2"; transcript_id "ENSG00000211659.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-25"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-25"; level 2; havana_gene "OTTHUMG00000151221.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12390 chr22 HAVANA transcript 23029190 23029735 . + . gene_id "ENSG00000211659.2"; transcript_id "ENST00000390305.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-25"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-25-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151221.1"; havana_transcript "OTTHUMT00000321825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12391 chr22 HAVANA exon 23029190 23029278 . + . gene_id "ENSG00000211659.2"; transcript_id "ENST00000390305.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-25"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-25-001"; exon_number 1; exon_id "ENSE00001867729.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151221.1"; havana_transcript "OTTHUMT00000321825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12392 chr22 HAVANA CDS 23029233 23029278 . + 0 gene_id "ENSG00000211659.2"; transcript_id "ENST00000390305.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-25"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-25-001"; exon_number 1; exon_id "ENSE00001867729.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151221.1"; havana_transcript "OTTHUMT00000321825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12393 chr22 HAVANA start_codon 23029233 23029235 . + 0 gene_id "ENSG00000211659.2"; transcript_id "ENST00000390305.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-25"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-25-001"; exon_number 1; exon_id "ENSE00001867729.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151221.1"; havana_transcript "OTTHUMT00000321825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12394 chr22 HAVANA exon 23029445 23029735 . + . gene_id "ENSG00000211659.2"; transcript_id "ENST00000390305.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-25"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-25-001"; exon_number 2; exon_id "ENSE00001822370.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151221.1"; havana_transcript "OTTHUMT00000321825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12395 chr22 HAVANA CDS 23029445 23029735 . + 2 gene_id "ENSG00000211659.2"; transcript_id "ENST00000390305.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-25"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-25-001"; exon_number 2; exon_id "ENSE00001822370.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151221.1"; havana_transcript "OTTHUMT00000321825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12396 chr22 HAVANA UTR 23029190 23029232 . + . gene_id "ENSG00000211659.2"; transcript_id "ENST00000390305.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-25"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-25-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151221.1"; havana_transcript "OTTHUMT00000321825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12397 chr22 HAVANA gene 23032315 23032462 . + . gene_id "ENSG00000232350.1"; transcript_id "ENSG00000232350.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-102D1.16"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-102D1.16"; level 2; havana_gene "OTTHUMG00000151223.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12398 chr22 HAVANA transcript 23032315 23032462 . + . gene_id "ENSG00000232350.1"; transcript_id "ENST00000418731.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-102D1.16"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-102D1.16-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151223.1"; havana_transcript "OTTHUMT00000321827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12399 chr22 HAVANA exon 23032315 23032462 . + . gene_id "ENSG00000232350.1"; transcript_id "ENST00000418731.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-102D1.16"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-102D1.16-001"; exon_number 1; exon_id "ENSE00001673346.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151223.1"; havana_transcript "OTTHUMT00000321827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12400 chr22 HAVANA gene 23035263 23035797 . - . gene_id "ENSG00000223999.1"; transcript_id "ENSG00000223999.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-102D1.18"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "LL22NC03-102D1.18"; level 2; havana_gene "OTTHUMG00000151209.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12401 chr22 HAVANA transcript 23035263 23035797 . - . gene_id "ENSG00000223999.1"; transcript_id "ENST00000438185.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-102D1.18"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LL22NC03-102D1.18-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000151209.1"; havana_transcript "OTTHUMT00000321813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12402 chr22 HAVANA exon 23035632 23035797 . - . gene_id "ENSG00000223999.1"; transcript_id "ENST00000438185.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-102D1.18"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LL22NC03-102D1.18-001"; exon_number 1; exon_id "ENSE00001604388.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151209.1"; havana_transcript "OTTHUMT00000321813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12403 chr22 HAVANA exon 23035263 23035547 . - . gene_id "ENSG00000223999.1"; transcript_id "ENST00000438185.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-102D1.18"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LL22NC03-102D1.18-001"; exon_number 2; exon_id "ENSE00001723480.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000151209.1"; havana_transcript "OTTHUMT00000321813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12404 chr22 HAVANA gene 23036924 23037437 . + . gene_id "ENSG00000253822.1"; transcript_id "ENSG00000253822.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-24"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-24"; level 2; havana_gene "OTTHUMG00000151230.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12405 chr22 HAVANA transcript 23036924 23037437 . + . gene_id "ENSG00000253822.1"; transcript_id "ENST00000517477.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-24"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-24-001"; level 2; havana_gene "OTTHUMG00000151230.1"; havana_transcript "OTTHUMT00000321834.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12406 chr22 HAVANA exon 23036924 23036963 . + . gene_id "ENSG00000253822.1"; transcript_id "ENST00000517477.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-24"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-24-001"; exon_number 1; exon_id "ENSE00002135609.1"; level 2; havana_gene "OTTHUMG00000151230.1"; havana_transcript "OTTHUMT00000321834.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12407 chr22 HAVANA exon 23037281 23037437 . + . gene_id "ENSG00000253822.1"; transcript_id "ENST00000517477.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-24"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-24-001"; exon_number 2; exon_id "ENSE00002126737.1"; level 2; havana_gene "OTTHUMG00000151230.1"; havana_transcript "OTTHUMT00000321834.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12408 chr22 HAVANA gene 23040274 23040892 . + . gene_id "ENSG00000211660.3"; transcript_id "ENSG00000211660.3"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-23"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-23"; level 2; havana_gene "OTTHUMG00000151234.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12409 chr22 HAVANA transcript 23040274 23040892 . + . gene_id "ENSG00000211660.3"; transcript_id "ENST00000390306.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-23"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-23-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151234.2"; havana_transcript "OTTHUMT00000321839.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12410 chr22 HAVANA exon 23040274 23040481 . + . gene_id "ENSG00000211660.3"; transcript_id "ENST00000390306.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-23"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-23-001"; exon_number 1; exon_id "ENSE00001893701.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151234.2"; havana_transcript "OTTHUMT00000321839.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12411 chr22 HAVANA CDS 23040436 23040481 . + 0 gene_id "ENSG00000211660.3"; transcript_id "ENST00000390306.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-23"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-23-001"; exon_number 1; exon_id "ENSE00001893701.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151234.2"; havana_transcript "OTTHUMT00000321839.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12412 chr22 HAVANA start_codon 23040436 23040438 . + 0 gene_id "ENSG00000211660.3"; transcript_id "ENST00000390306.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-23"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-23-001"; exon_number 1; exon_id "ENSE00001893701.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151234.2"; havana_transcript "OTTHUMT00000321839.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12413 chr22 HAVANA exon 23040599 23040892 . + . gene_id "ENSG00000211660.3"; transcript_id "ENST00000390306.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-23"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-23-001"; exon_number 2; exon_id "ENSE00001927948.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151234.2"; havana_transcript "OTTHUMT00000321839.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12414 chr22 HAVANA CDS 23040599 23040892 . + 2 gene_id "ENSG00000211660.3"; transcript_id "ENST00000390306.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-23"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-23-001"; exon_number 2; exon_id "ENSE00001927948.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151234.2"; havana_transcript "OTTHUMT00000321839.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12415 chr22 HAVANA UTR 23040274 23040435 . + . gene_id "ENSG00000211660.3"; transcript_id "ENST00000390306.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-23"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-23-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151234.2"; havana_transcript "OTTHUMT00000321839.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12416 chr22 ENSEMBL gene 23040391 23040485 . + . gene_id "ENSG00000207830.1"; transcript_id "ENSG00000207830.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D86994.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D86994.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12417 chr22 ENSEMBL transcript 23040391 23040485 . + . gene_id "ENSG00000207830.1"; transcript_id "ENST00000385095.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D86994.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D86994.1-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12418 chr22 ENSEMBL exon 23040391 23040485 . + . gene_id "ENSG00000207830.1"; transcript_id "ENST00000385095.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D86994.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D86994.1-201"; exon_number 1; exon_id "ENSE00001809285.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12419 chr22 HAVANA gene 23043245 23043455 . + . gene_id "ENSG00000253546.1"; transcript_id "ENSG00000253546.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVVI-22-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVVI-22-1"; level 2; havana_gene "OTTHUMG00000151219.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12420 chr22 HAVANA transcript 23043245 23043455 . + . gene_id "ENSG00000253546.1"; transcript_id "ENST00000521183.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVVI-22-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVVI-22-1-001"; level 2; havana_gene "OTTHUMG00000151219.1"; havana_transcript "OTTHUMT00000321823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12421 chr22 HAVANA exon 23043245 23043455 . + . gene_id "ENSG00000253546.1"; transcript_id "ENST00000521183.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVVI-22-1"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVVI-22-1-001"; exon_number 1; exon_id "ENSE00002101525.1"; level 2; havana_gene "OTTHUMG00000151219.1"; havana_transcript "OTTHUMT00000321823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12422 chr22 HAVANA gene 23046750 23047307 . + . gene_id "ENSG00000211661.2"; transcript_id "ENSG00000211661.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-22"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-22"; level 2; havana_gene "OTTHUMG00000151229.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12423 chr22 HAVANA transcript 23046750 23047307 . + . gene_id "ENSG00000211661.2"; transcript_id "ENST00000390307.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-22"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-22-001"; level 2; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151229.2"; havana_transcript "OTTHUMT00000321833.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12424 chr22 HAVANA exon 23046750 23046859 . + . gene_id "ENSG00000211661.2"; transcript_id "ENST00000390307.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-22"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-22-001"; exon_number 1; exon_id "ENSE00001507797.2"; level 2; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151229.2"; havana_transcript "OTTHUMT00000321833.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12425 chr22 HAVANA CDS 23046814 23046859 . + 0 gene_id "ENSG00000211661.2"; transcript_id "ENST00000390307.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-22"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-22-001"; exon_number 1; exon_id "ENSE00001507797.2"; level 2; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151229.2"; havana_transcript "OTTHUMT00000321833.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12426 chr22 HAVANA start_codon 23046814 23046816 . + 0 gene_id "ENSG00000211661.2"; transcript_id "ENST00000390307.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-22"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-22-001"; exon_number 1; exon_id "ENSE00001507797.2"; level 2; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151229.2"; havana_transcript "OTTHUMT00000321833.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12427 chr22 HAVANA exon 23047009 23047307 . + . gene_id "ENSG00000211661.2"; transcript_id "ENST00000390307.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-22"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-22-001"; exon_number 2; exon_id "ENSE00001507798.2"; level 2; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151229.2"; havana_transcript "OTTHUMT00000321833.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12428 chr22 HAVANA CDS 23047009 23047307 . + 2 gene_id "ENSG00000211661.2"; transcript_id "ENST00000390307.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-22"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-22-001"; exon_number 2; exon_id "ENSE00001507798.2"; level 2; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151229.2"; havana_transcript "OTTHUMT00000321833.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12429 chr22 HAVANA UTR 23046750 23046813 . + . gene_id "ENSG00000211661.2"; transcript_id "ENST00000390307.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-22"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-22-001"; level 2; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151229.2"; havana_transcript "OTTHUMT00000321833.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12430 chr22 HAVANA gene 23054174 23055688 . + . gene_id "ENSG00000211662.2"; transcript_id "ENSG00000211662.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-21"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-21"; level 2; havana_gene "OTTHUMG00000151213.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12431 chr22 HAVANA transcript 23054174 23055688 . + . gene_id "ENSG00000211662.2"; transcript_id "ENST00000390308.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-21"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-21-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151213.1"; havana_transcript "OTTHUMT00000321817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12432 chr22 HAVANA exon 23054174 23054290 . + . gene_id "ENSG00000211662.2"; transcript_id "ENST00000390308.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-21"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-21-001"; exon_number 1; exon_id "ENSE00001910000.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151213.1"; havana_transcript "OTTHUMT00000321817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12433 chr22 HAVANA exon 23054770 23054949 . + . gene_id "ENSG00000211662.2"; transcript_id "ENST00000390308.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-21"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-21-001"; exon_number 2; exon_id "ENSE00001857372.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151213.1"; havana_transcript "OTTHUMT00000321817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12434 chr22 HAVANA CDS 23054904 23054949 . + 0 gene_id "ENSG00000211662.2"; transcript_id "ENST00000390308.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-21"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-21-001"; exon_number 2; exon_id "ENSE00001857372.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151213.1"; havana_transcript "OTTHUMT00000321817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12435 chr22 HAVANA start_codon 23054904 23054906 . + 0 gene_id "ENSG00000211662.2"; transcript_id "ENST00000390308.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-21"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-21-001"; exon_number 2; exon_id "ENSE00001857372.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151213.1"; havana_transcript "OTTHUMT00000321817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12436 chr22 HAVANA exon 23055384 23055688 . + . gene_id "ENSG00000211662.2"; transcript_id "ENST00000390308.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-21"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-21-001"; exon_number 3; exon_id "ENSE00001879509.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151213.1"; havana_transcript "OTTHUMT00000321817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12437 chr22 HAVANA CDS 23055384 23055688 . + 2 gene_id "ENSG00000211662.2"; transcript_id "ENST00000390308.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-21"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-21-001"; exon_number 3; exon_id "ENSE00001879509.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151213.1"; havana_transcript "OTTHUMT00000321817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12438 chr22 HAVANA UTR 23054174 23054290 . + . gene_id "ENSG00000211662.2"; transcript_id "ENST00000390308.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-21"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-21-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151213.1"; havana_transcript "OTTHUMT00000321817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12439 chr22 HAVANA UTR 23054770 23054903 . + . gene_id "ENSG00000211662.2"; transcript_id "ENST00000390308.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-21"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-21-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151213.1"; havana_transcript "OTTHUMT00000321817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12440 chr22 HAVANA gene 23057775 23057904 . + . gene_id "ENSG00000254240.1"; transcript_id "ENSG00000254240.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-20"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-20"; level 2; havana_gene "OTTHUMG00000151242.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12441 chr22 HAVANA transcript 23057775 23057904 . + . gene_id "ENSG00000254240.1"; transcript_id "ENST00000519296.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-20"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-20-001"; level 2; havana_gene "OTTHUMG00000151242.1"; havana_transcript "OTTHUMT00000321847.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12442 chr22 HAVANA exon 23057775 23057904 . + . gene_id "ENSG00000254240.1"; transcript_id "ENST00000519296.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLVI-20"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLVI-20-001"; exon_number 1; exon_id "ENSE00002126485.1"; level 2; havana_gene "OTTHUMG00000151242.1"; havana_transcript "OTTHUMT00000321847.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12443 chr22 HAVANA gene 23063108 23063630 . + . gene_id "ENSG00000211663.2"; transcript_id "ENSG00000211663.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-19"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-19"; level 2; havana_gene "OTTHUMG00000151226.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12444 chr22 HAVANA transcript 23063108 23063630 . + . gene_id "ENSG00000211663.2"; transcript_id "ENST00000390309.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-19"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-19-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151226.1"; havana_transcript "OTTHUMT00000321830.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12445 chr22 HAVANA exon 23063108 23063193 . + . gene_id "ENSG00000211663.2"; transcript_id "ENST00000390309.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-19"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-19-001"; exon_number 1; exon_id "ENSE00001858147.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151226.1"; havana_transcript "OTTHUMT00000321830.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12446 chr22 HAVANA CDS 23063148 23063193 . + 0 gene_id "ENSG00000211663.2"; transcript_id "ENST00000390309.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-19"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-19-001"; exon_number 1; exon_id "ENSE00001858147.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151226.1"; havana_transcript "OTTHUMT00000321830.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12447 chr22 HAVANA start_codon 23063148 23063150 . + 0 gene_id "ENSG00000211663.2"; transcript_id "ENST00000390309.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-19"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-19-001"; exon_number 1; exon_id "ENSE00001858147.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151226.1"; havana_transcript "OTTHUMT00000321830.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12448 chr22 HAVANA exon 23063340 23063630 . + . gene_id "ENSG00000211663.2"; transcript_id "ENST00000390309.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-19"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-19-001"; exon_number 2; exon_id "ENSE00001507801.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151226.1"; havana_transcript "OTTHUMT00000321830.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12449 chr22 HAVANA CDS 23063340 23063630 . + 2 gene_id "ENSG00000211663.2"; transcript_id "ENST00000390309.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-19"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-19-001"; exon_number 2; exon_id "ENSE00001507801.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151226.1"; havana_transcript "OTTHUMT00000321830.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12450 chr22 HAVANA UTR 23063108 23063147 . + . gene_id "ENSG00000211663.2"; transcript_id "ENST00000390309.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-19"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-19-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151226.1"; havana_transcript "OTTHUMT00000321830.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12451 chr22 ENSEMBL gene 23077063 23077157 . + . gene_id "ENSG00000264629.1"; transcript_id "ENSG00000264629.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D87007.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D87007.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12452 chr22 ENSEMBL transcript 23077063 23077157 . + . gene_id "ENSG00000264629.1"; transcript_id "ENST00000579613.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D87007.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D87007.1-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12453 chr22 ENSEMBL exon 23077063 23077157 . + . gene_id "ENSG00000264629.1"; transcript_id "ENST00000579613.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D87007.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D87007.1-201"; exon_number 1; exon_id "ENSE00002704122.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12454 chr22 HAVANA gene 23077095 23077584 . + . gene_id "ENSG00000211664.2"; transcript_id "ENSG00000211664.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-18"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-18"; level 2; havana_gene "OTTHUMG00000151232.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12455 chr22 HAVANA transcript 23077095 23077584 . + . gene_id "ENSG00000211664.2"; transcript_id "ENST00000390310.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-18"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-18-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151232.1"; havana_transcript "OTTHUMT00000321836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12456 chr22 HAVANA exon 23077095 23077153 . + . gene_id "ENSG00000211664.2"; transcript_id "ENST00000390310.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-18"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-18-001"; exon_number 1; exon_id "ENSE00001594117.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151232.1"; havana_transcript "OTTHUMT00000321836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12457 chr22 HAVANA CDS 23077108 23077153 . + 0 gene_id "ENSG00000211664.2"; transcript_id "ENST00000390310.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-18"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-18-001"; exon_number 1; exon_id "ENSE00001594117.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151232.1"; havana_transcript "OTTHUMT00000321836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12458 chr22 HAVANA start_codon 23077108 23077110 . + 0 gene_id "ENSG00000211664.2"; transcript_id "ENST00000390310.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-18"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-18-001"; exon_number 1; exon_id "ENSE00001594117.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151232.1"; havana_transcript "OTTHUMT00000321836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12459 chr22 HAVANA exon 23077270 23077584 . + . gene_id "ENSG00000211664.2"; transcript_id "ENST00000390310.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-18"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-18-001"; exon_number 2; exon_id "ENSE00001894429.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151232.1"; havana_transcript "OTTHUMT00000321836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12460 chr22 HAVANA CDS 23077270 23077584 . + 2 gene_id "ENSG00000211664.2"; transcript_id "ENST00000390310.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-18"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-18-001"; exon_number 2; exon_id "ENSE00001894429.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151232.1"; havana_transcript "OTTHUMT00000321836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12461 chr22 HAVANA UTR 23077095 23077107 . + . gene_id "ENSG00000211664.2"; transcript_id "ENST00000390310.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-18"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-18-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151232.1"; havana_transcript "OTTHUMT00000321836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12462 chr22 HAVANA gene 23081432 23081675 . + . gene_id "ENSG00000253152.1"; transcript_id "ENSG00000253152.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-17"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-17"; level 2; havana_gene "OTTHUMG00000151227.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12463 chr22 HAVANA transcript 23081432 23081675 . + . gene_id "ENSG00000253152.1"; transcript_id "ENST00000519099.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-17"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-17-001"; level 2; havana_gene "OTTHUMG00000151227.1"; havana_transcript "OTTHUMT00000321831.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12464 chr22 HAVANA exon 23081432 23081675 . + . gene_id "ENSG00000253152.1"; transcript_id "ENST00000519099.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-17"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-17-001"; exon_number 1; exon_id "ENSE00002132523.1"; level 2; havana_gene "OTTHUMG00000151227.1"; havana_transcript "OTTHUMT00000321831.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12465 chr22 HAVANA gene 23089870 23090398 . + . gene_id "ENSG00000211665.2"; transcript_id "ENSG00000211665.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-16"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-16"; level 2; havana_gene "OTTHUMG00000151231.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12466 chr22 HAVANA transcript 23089870 23090398 . + . gene_id "ENSG00000211665.2"; transcript_id "ENST00000390311.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-16"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-16-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151231.1"; havana_transcript "OTTHUMT00000321835.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12467 chr22 HAVANA exon 23089870 23089953 . + . gene_id "ENSG00000211665.2"; transcript_id "ENST00000390311.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-16"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-16-001"; exon_number 1; exon_id "ENSE00001937778.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151231.1"; havana_transcript "OTTHUMT00000321835.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12468 chr22 HAVANA CDS 23089908 23089953 . + 0 gene_id "ENSG00000211665.2"; transcript_id "ENST00000390311.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-16"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-16-001"; exon_number 1; exon_id "ENSE00001937778.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151231.1"; havana_transcript "OTTHUMT00000321835.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12469 chr22 HAVANA start_codon 23089908 23089910 . + 0 gene_id "ENSG00000211665.2"; transcript_id "ENST00000390311.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-16"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-16-001"; exon_number 1; exon_id "ENSE00001937778.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151231.1"; havana_transcript "OTTHUMT00000321835.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12470 chr22 HAVANA exon 23090108 23090398 . + . gene_id "ENSG00000211665.2"; transcript_id "ENST00000390311.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-16"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-16-001"; exon_number 2; exon_id "ENSE00001915349.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151231.1"; havana_transcript "OTTHUMT00000321835.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12471 chr22 HAVANA CDS 23090108 23090398 . + 2 gene_id "ENSG00000211665.2"; transcript_id "ENST00000390311.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-16"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-16-001"; exon_number 2; exon_id "ENSE00001915349.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151231.1"; havana_transcript "OTTHUMT00000321835.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12472 chr22 HAVANA UTR 23089870 23089907 . + . gene_id "ENSG00000211665.2"; transcript_id "ENST00000390311.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-16"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-16-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151231.1"; havana_transcript "OTTHUMT00000321835.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12473 chr22 HAVANA gene 23098043 23098286 . + . gene_id "ENSG00000253786.1"; transcript_id "ENSG00000253786.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-15"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-15"; level 2; havana_gene "OTTHUMG00000151210.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12474 chr22 HAVANA transcript 23098043 23098286 . + . gene_id "ENSG00000253786.1"; transcript_id "ENST00000518356.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-15"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-15-001"; level 2; havana_gene "OTTHUMG00000151210.2"; havana_transcript "OTTHUMT00000321814.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12475 chr22 HAVANA exon 23098043 23098286 . + . gene_id "ENSG00000253786.1"; transcript_id "ENST00000518356.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-15"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-15-001"; exon_number 1; exon_id "ENSE00002129095.1"; level 2; havana_gene "OTTHUMG00000151210.2"; havana_transcript "OTTHUMT00000321814.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12476 chr22 ENSEMBL gene 23101185 23101279 . + . gene_id "ENSG00000207835.1"; transcript_id "ENSG00000207835.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D87015.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D87015.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12477 chr22 ENSEMBL transcript 23101185 23101279 . + . gene_id "ENSG00000207835.1"; transcript_id "ENST00000385100.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D87015.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D87015.1-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12478 chr22 ENSEMBL exon 23101185 23101279 . + . gene_id "ENSG00000207835.1"; transcript_id "ENST00000385100.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D87015.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D87015.1-201"; exon_number 1; exon_id "ENSE00001807623.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12479 chr22 HAVANA gene 23101189 23101707 . + . gene_id "ENSG00000211666.2"; transcript_id "ENSG00000211666.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-14"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-14"; level 2; havana_gene "OTTHUMG00000151235.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12480 chr22 HAVANA transcript 23101189 23101707 . + . gene_id "ENSG00000211666.2"; transcript_id "ENST00000390312.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-14"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-14-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151235.1"; havana_transcript "OTTHUMT00000321840.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12481 chr22 HAVANA exon 23101189 23101275 . + . gene_id "ENSG00000211666.2"; transcript_id "ENST00000390312.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-14"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-14-001"; exon_number 1; exon_id "ENSE00001823704.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151235.1"; havana_transcript "OTTHUMT00000321840.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12482 chr22 HAVANA CDS 23101230 23101275 . + 0 gene_id "ENSG00000211666.2"; transcript_id "ENST00000390312.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-14"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-14-001"; exon_number 1; exon_id "ENSE00001823704.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151235.1"; havana_transcript "OTTHUMT00000321840.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12483 chr22 HAVANA start_codon 23101230 23101232 . + 0 gene_id "ENSG00000211666.2"; transcript_id "ENST00000390312.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-14"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-14-001"; exon_number 1; exon_id "ENSE00001823704.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151235.1"; havana_transcript "OTTHUMT00000321840.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12484 chr22 HAVANA exon 23101393 23101707 . + . gene_id "ENSG00000211666.2"; transcript_id "ENST00000390312.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-14"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-14-001"; exon_number 2; exon_id "ENSE00001873623.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151235.1"; havana_transcript "OTTHUMT00000321840.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12485 chr22 HAVANA CDS 23101393 23101707 . + 2 gene_id "ENSG00000211666.2"; transcript_id "ENST00000390312.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-14"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-14-001"; exon_number 2; exon_id "ENSE00001873623.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151235.1"; havana_transcript "OTTHUMT00000321840.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12486 chr22 HAVANA UTR 23101189 23101229 . + . gene_id "ENSG00000211666.2"; transcript_id "ENST00000390312.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-14"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-14-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151235.1"; havana_transcript "OTTHUMT00000321840.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12487 chr22 HAVANA gene 23104787 23105009 . + . gene_id "ENSG00000253590.1"; transcript_id "ENSG00000253590.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-13"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-13"; level 2; havana_gene "OTTHUMG00000151215.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12488 chr22 HAVANA transcript 23104787 23105009 . + . gene_id "ENSG00000253590.1"; transcript_id "ENST00000518475.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-13"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-13-001"; level 2; havana_gene "OTTHUMG00000151215.2"; havana_transcript "OTTHUMT00000321819.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12489 chr22 HAVANA exon 23104787 23105009 . + . gene_id "ENSG00000253590.1"; transcript_id "ENST00000518475.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-13"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-13-001"; exon_number 1; exon_id "ENSE00002137268.1"; level 2; havana_gene "OTTHUMG00000151215.2"; havana_transcript "OTTHUMT00000321819.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12490 chr22 HAVANA gene 23114317 23115079 . + . gene_id "ENSG00000211667.2"; transcript_id "ENSG00000211667.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-12"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-12"; level 2; havana_gene "OTTHUMG00000151233.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12491 chr22 HAVANA transcript 23114317 23115079 . + . gene_id "ENSG00000211667.2"; transcript_id "ENST00000390313.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-12"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-12-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151233.1"; havana_transcript "OTTHUMT00000321838.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12492 chr22 HAVANA exon 23114317 23114371 . + . gene_id "ENSG00000211667.2"; transcript_id "ENST00000390313.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-12"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-12-001"; exon_number 1; exon_id "ENSE00001813263.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151233.1"; havana_transcript "OTTHUMT00000321838.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12493 chr22 HAVANA CDS 23114326 23114371 . + 0 gene_id "ENSG00000211667.2"; transcript_id "ENST00000390313.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-12"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-12-001"; exon_number 1; exon_id "ENSE00001813263.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151233.1"; havana_transcript "OTTHUMT00000321838.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12494 chr22 HAVANA start_codon 23114326 23114328 . + 0 gene_id "ENSG00000211667.2"; transcript_id "ENST00000390313.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-12"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-12-001"; exon_number 1; exon_id "ENSE00001813263.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151233.1"; havana_transcript "OTTHUMT00000321838.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12495 chr22 HAVANA exon 23114775 23115079 . + . gene_id "ENSG00000211667.2"; transcript_id "ENST00000390313.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-12"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-12-001"; exon_number 2; exon_id "ENSE00001942606.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151233.1"; havana_transcript "OTTHUMT00000321838.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12496 chr22 HAVANA CDS 23114775 23115079 . + 2 gene_id "ENSG00000211667.2"; transcript_id "ENST00000390313.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-12"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-12-001"; exon_number 2; exon_id "ENSE00001942606.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151233.1"; havana_transcript "OTTHUMT00000321838.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12497 chr22 HAVANA UTR 23114317 23114325 . + . gene_id "ENSG00000211667.2"; transcript_id "ENST00000390313.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-12"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-12-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151233.1"; havana_transcript "OTTHUMT00000321838.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12498 chr22 HAVANA gene 23117022 23117184 . + . gene_id "ENSG00000231392.1"; transcript_id "ENSG00000231392.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-24A12.8"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-24A12.8"; level 2; havana_gene "OTTHUMG00000151295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12499 chr22 HAVANA transcript 23117022 23117184 . + . gene_id "ENSG00000231392.1"; transcript_id "ENST00000415642.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-24A12.8"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-24A12.8-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151295.1"; havana_transcript "OTTHUMT00000322124.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12500 chr22 HAVANA exon 23117022 23117184 . + . gene_id "ENSG00000231392.1"; transcript_id "ENST00000415642.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-24A12.8"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-24A12.8-001"; exon_number 1; exon_id "ENSE00001785389.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151295.1"; havana_transcript "OTTHUMT00000322124.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12501 chr22 ENSEMBL gene 23134977 23135071 . + . gene_id "ENSG00000207833.1"; transcript_id "ENSG00000207833.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D86998.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D86998.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12502 chr22 ENSEMBL transcript 23134977 23135071 . + . gene_id "ENSG00000207833.1"; transcript_id "ENST00000385098.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D86998.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D86998.1-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12503 chr22 ENSEMBL exon 23134977 23135071 . + . gene_id "ENSG00000207833.1"; transcript_id "ENST00000385098.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D86998.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D86998.1-201"; exon_number 1; exon_id "ENSE00001806978.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12504 chr22 HAVANA gene 23134980 23135496 . + . gene_id "ENSG00000211668.2"; transcript_id "ENSG00000211668.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-11"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-11"; level 2; havana_gene "OTTHUMG00000151236.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12505 chr22 HAVANA transcript 23134980 23135496 . + . gene_id "ENSG00000211668.2"; transcript_id "ENST00000390314.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-11"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-11-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151236.1"; havana_transcript "OTTHUMT00000321841.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12506 chr22 HAVANA exon 23134980 23135067 . + . gene_id "ENSG00000211668.2"; transcript_id "ENST00000390314.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-11"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-11-001"; exon_number 1; exon_id "ENSE00001861852.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151236.1"; havana_transcript "OTTHUMT00000321841.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12507 chr22 HAVANA CDS 23135022 23135067 . + 0 gene_id "ENSG00000211668.2"; transcript_id "ENST00000390314.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-11"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-11-001"; exon_number 1; exon_id "ENSE00001861852.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151236.1"; havana_transcript "OTTHUMT00000321841.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12508 chr22 HAVANA start_codon 23135022 23135024 . + 0 gene_id "ENSG00000211668.2"; transcript_id "ENST00000390314.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-11"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-11-001"; exon_number 1; exon_id "ENSE00001861852.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151236.1"; havana_transcript "OTTHUMT00000321841.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12509 chr22 HAVANA exon 23135185 23135496 . + . gene_id "ENSG00000211668.2"; transcript_id "ENST00000390314.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-11"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-11-001"; exon_number 2; exon_id "ENSE00001908358.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151236.1"; havana_transcript "OTTHUMT00000321841.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12510 chr22 HAVANA CDS 23135185 23135496 . + 2 gene_id "ENSG00000211668.2"; transcript_id "ENST00000390314.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-11"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-11-001"; exon_number 2; exon_id "ENSE00001908358.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151236.1"; havana_transcript "OTTHUMT00000321841.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12511 chr22 HAVANA UTR 23134980 23135021 . + . gene_id "ENSG00000211668.2"; transcript_id "ENST00000390314.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-11"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-11-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151236.1"; havana_transcript "OTTHUMT00000321841.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12512 chr22 HAVANA gene 23154244 23154782 . + . gene_id "ENSG00000211669.2"; transcript_id "ENSG00000211669.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-10"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-10"; level 2; havana_gene "OTTHUMG00000151237.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12513 chr22 HAVANA transcript 23154244 23154782 . + . gene_id "ENSG00000211669.2"; transcript_id "ENST00000390315.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-10"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-10-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151237.1"; havana_transcript "OTTHUMT00000321842.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12514 chr22 HAVANA exon 23154244 23154324 . + . gene_id "ENSG00000211669.2"; transcript_id "ENST00000390315.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-10"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-10-001"; exon_number 1; exon_id "ENSE00001912875.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151237.1"; havana_transcript "OTTHUMT00000321842.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12515 chr22 HAVANA CDS 23154279 23154324 . + 0 gene_id "ENSG00000211669.2"; transcript_id "ENST00000390315.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-10"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-10-001"; exon_number 1; exon_id "ENSE00001912875.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151237.1"; havana_transcript "OTTHUMT00000321842.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12516 chr22 HAVANA start_codon 23154279 23154281 . + 0 gene_id "ENSG00000211669.2"; transcript_id "ENST00000390315.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-10"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-10-001"; exon_number 1; exon_id "ENSE00001912875.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151237.1"; havana_transcript "OTTHUMT00000321842.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12517 chr22 HAVANA exon 23154478 23154782 . + . gene_id "ENSG00000211669.2"; transcript_id "ENST00000390315.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-10"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-10-001"; exon_number 2; exon_id "ENSE00001507813.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151237.1"; havana_transcript "OTTHUMT00000321842.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12518 chr22 HAVANA CDS 23154478 23154782 . + 2 gene_id "ENSG00000211669.2"; transcript_id "ENST00000390315.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-10"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-10-001"; exon_number 2; exon_id "ENSE00001507813.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151237.1"; havana_transcript "OTTHUMT00000321842.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12519 chr22 HAVANA UTR 23154244 23154278 . + . gene_id "ENSG00000211669.2"; transcript_id "ENST00000390315.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-10"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-10-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151237.1"; havana_transcript "OTTHUMT00000321842.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12520 chr22 HAVANA gene 23157168 23157423 . + . gene_id "ENSG00000226477.1"; transcript_id "ENSG00000226477.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-84E4.11"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-84E4.11"; level 2; havana_gene "OTTHUMG00000151241.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12521 chr22 HAVANA transcript 23157168 23157423 . + . gene_id "ENSG00000226477.1"; transcript_id "ENST00000423259.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-84E4.11"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-84E4.11-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151241.1"; havana_transcript "OTTHUMT00000321846.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12522 chr22 HAVANA exon 23157168 23157423 . + . gene_id "ENSG00000226477.1"; transcript_id "ENST00000423259.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-84E4.11"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-84E4.11-001"; exon_number 1; exon_id "ENSE00001647271.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151241.1"; havana_transcript "OTTHUMT00000321846.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12523 chr22 HAVANA gene 23161507 23162253 . + . gene_id "ENSG00000211670.2"; transcript_id "ENSG00000211670.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-9"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-9"; level 2; havana_gene "OTTHUMG00000151239.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12524 chr22 HAVANA transcript 23161507 23162253 . + . gene_id "ENSG00000211670.2"; transcript_id "ENST00000390316.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-9"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-9-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151239.1"; havana_transcript "OTTHUMT00000321844.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12525 chr22 HAVANA exon 23161507 23161667 . + . gene_id "ENSG00000211670.2"; transcript_id "ENST00000390316.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-9"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-9-001"; exon_number 1; exon_id "ENSE00001913971.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151239.1"; havana_transcript "OTTHUMT00000321844.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12526 chr22 HAVANA CDS 23161622 23161667 . + 0 gene_id "ENSG00000211670.2"; transcript_id "ENST00000390316.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-9"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-9-001"; exon_number 1; exon_id "ENSE00001913971.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151239.1"; havana_transcript "OTTHUMT00000321844.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12527 chr22 HAVANA start_codon 23161622 23161624 . + 0 gene_id "ENSG00000211670.2"; transcript_id "ENST00000390316.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-9"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-9-001"; exon_number 1; exon_id "ENSE00001913971.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151239.1"; havana_transcript "OTTHUMT00000321844.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12528 chr22 HAVANA exon 23161954 23162253 . + . gene_id "ENSG00000211670.2"; transcript_id "ENST00000390316.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-9"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-9-001"; exon_number 2; exon_id "ENSE00001930986.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151239.1"; havana_transcript "OTTHUMT00000321844.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12529 chr22 HAVANA CDS 23161954 23162253 . + 2 gene_id "ENSG00000211670.2"; transcript_id "ENST00000390316.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-9"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-9-001"; exon_number 2; exon_id "ENSE00001930986.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151239.1"; havana_transcript "OTTHUMT00000321844.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12530 chr22 HAVANA UTR 23161507 23161621 . + . gene_id "ENSG00000211670.2"; transcript_id "ENST00000390316.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-9"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-9-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151239.1"; havana_transcript "OTTHUMT00000321844.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12531 chr22 HAVANA gene 23165153 23165787 . + . gene_id "ENSG00000211671.2"; transcript_id "ENSG00000211671.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-8"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-8"; level 2; havana_gene "OTTHUMG00000151240.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12532 chr22 HAVANA transcript 23165153 23165787 . + . gene_id "ENSG00000211671.2"; transcript_id "ENST00000390317.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-8"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-8-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151240.1"; havana_transcript "OTTHUMT00000321845.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12533 chr22 HAVANA exon 23165153 23165360 . + . gene_id "ENSG00000211671.2"; transcript_id "ENST00000390317.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-8"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-8-001"; exon_number 1; exon_id "ENSE00001888897.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151240.1"; havana_transcript "OTTHUMT00000321845.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12534 chr22 HAVANA CDS 23165315 23165360 . + 0 gene_id "ENSG00000211671.2"; transcript_id "ENST00000390317.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-8"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-8-001"; exon_number 1; exon_id "ENSE00001888897.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151240.1"; havana_transcript "OTTHUMT00000321845.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12535 chr22 HAVANA start_codon 23165315 23165317 . + 0 gene_id "ENSG00000211671.2"; transcript_id "ENST00000390317.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-8"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-8-001"; exon_number 1; exon_id "ENSE00001888897.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151240.1"; havana_transcript "OTTHUMT00000321845.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12536 chr22 HAVANA exon 23165476 23165787 . + . gene_id "ENSG00000211671.2"; transcript_id "ENST00000390317.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-8"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-8-001"; exon_number 2; exon_id "ENSE00001958284.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151240.1"; havana_transcript "OTTHUMT00000321845.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12537 chr22 HAVANA CDS 23165476 23165787 . + 2 gene_id "ENSG00000211671.2"; transcript_id "ENST00000390317.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-8"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-8-001"; exon_number 2; exon_id "ENSE00001958284.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151240.1"; havana_transcript "OTTHUMT00000321845.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12538 chr22 HAVANA UTR 23165153 23165314 . + . gene_id "ENSG00000211671.2"; transcript_id "ENST00000390317.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV2-8"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV2-8-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151240.1"; havana_transcript "OTTHUMT00000321845.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12539 chr22 ENSEMBL gene 23165270 23165365 . + . gene_id "ENSG00000207836.1"; transcript_id "ENSG00000207836.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR650"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR650"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12540 chr22 ENSEMBL transcript 23165270 23165365 . + . gene_id "ENSG00000207836.1"; transcript_id "ENST00000385101.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR650"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR650-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12541 chr22 ENSEMBL exon 23165270 23165365 . + . gene_id "ENSG00000207836.1"; transcript_id "ENST00000385101.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR650"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR650-201"; exon_number 1; exon_id "ENSE00001806979.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12542 chr22 HAVANA gene 23177041 23177293 . + . gene_id "ENSG00000237127.1"; transcript_id "ENSG00000237127.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-84E4.8"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-84E4.8"; level 2; havana_gene "OTTHUMG00000151228.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12543 chr22 HAVANA transcript 23177041 23177293 . + . gene_id "ENSG00000237127.1"; transcript_id "ENST00000458673.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-84E4.8"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-84E4.8-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151228.1"; havana_transcript "OTTHUMT00000321832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12544 chr22 HAVANA exon 23177041 23177293 . + . gene_id "ENSG00000237127.1"; transcript_id "ENST00000458673.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LL22NC03-84E4.8"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LL22NC03-84E4.8-001"; exon_number 1; exon_id "ENSE00001665608.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000151228.1"; havana_transcript "OTTHUMT00000321832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12545 chr22 HAVANA gene 23180779 23181049 . + . gene_id "ENSG00000254077.1"; transcript_id "ENSG00000254077.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-7"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-7"; level 2; havana_gene "OTTHUMG00000151208.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12546 chr22 HAVANA transcript 23180779 23181049 . + . gene_id "ENSG00000254077.1"; transcript_id "ENST00000522952.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-7"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-7-001"; level 2; havana_gene "OTTHUMG00000151208.1"; havana_transcript "OTTHUMT00000321812.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12547 chr22 HAVANA exon 23180779 23181049 . + . gene_id "ENSG00000254077.1"; transcript_id "ENST00000522952.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-7"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-7-001"; exon_number 1; exon_id "ENSE00002091636.1"; level 2; havana_gene "OTTHUMG00000151208.1"; havana_transcript "OTTHUMT00000321812.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12548 chr22 HAVANA gene 23192550 23192799 . + . gene_id "ENSG00000253448.1"; transcript_id "ENSG00000253448.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-6"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-6"; level 2; havana_gene "OTTHUMG00000151222.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12549 chr22 HAVANA transcript 23192550 23192799 . + . gene_id "ENSG00000253448.1"; transcript_id "ENST00000523937.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-6"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-6-001"; level 2; havana_gene "OTTHUMG00000151222.1"; havana_transcript "OTTHUMT00000321826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12550 chr22 HAVANA exon 23192550 23192799 . + . gene_id "ENSG00000253448.1"; transcript_id "ENST00000523937.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-6"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-6-001"; exon_number 1; exon_id "ENSE00002097375.1"; level 2; havana_gene "OTTHUMG00000151222.1"; havana_transcript "OTTHUMT00000321826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12551 chr22 ENSEMBL gene 23198720 23198813 . + . gene_id "ENSG00000207832.1"; transcript_id "ENSG00000207832.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D87024.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D87024.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12552 chr22 ENSEMBL transcript 23198720 23198813 . + . gene_id "ENSG00000207832.1"; transcript_id "ENST00000385097.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D87024.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D87024.1-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12553 chr22 ENSEMBL exon 23198720 23198813 . + . gene_id "ENSG00000207832.1"; transcript_id "ENST00000385097.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "D87024.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "D87024.1-201"; exon_number 1; exon_id "ENSE00001500103.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12554 chr22 HAVANA gene 23198937 23199213 . + . gene_id "ENSG00000253234.1"; transcript_id "ENSG00000253234.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV2-5"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV2-5"; level 2; havana_gene "OTTHUMG00000151216.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12555 chr22 HAVANA transcript 23198937 23199213 . + . gene_id "ENSG00000253234.1"; transcript_id "ENST00000522922.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV2-5"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV2-5-001"; level 2; havana_gene "OTTHUMG00000151216.1"; havana_transcript "OTTHUMT00000321820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12556 chr22 HAVANA exon 23198937 23199213 . + . gene_id "ENSG00000253234.1"; transcript_id "ENST00000522922.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV2-5"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV2-5-001"; exon_number 1; exon_id "ENSE00002114327.1"; level 2; havana_gene "OTTHUMG00000151216.1"; havana_transcript "OTTHUMT00000321820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12557 chr22 HAVANA gene 23200200 23200443 . + . gene_id "ENSG00000226420.1"; transcript_id "ENSG00000226420.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-4"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-4"; level 2; havana_gene "OTTHUMG00000151238.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12558 chr22 HAVANA transcript 23200200 23200443 . + . gene_id "ENSG00000226420.1"; transcript_id "ENST00000432300.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-4"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-4-001"; level 2; havana_gene "OTTHUMG00000151238.1"; havana_transcript "OTTHUMT00000321843.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12559 chr22 HAVANA exon 23200200 23200443 . + . gene_id "ENSG00000226420.1"; transcript_id "ENST00000432300.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-4"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-4-001"; exon_number 1; exon_id "ENSE00001728928.1"; level 2; havana_gene "OTTHUMG00000151238.1"; havana_transcript "OTTHUMT00000321843.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12560 chr22 HAVANA gene 23213686 23214214 . + . gene_id "ENSG00000211672.2"; transcript_id "ENSG00000211672.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-3"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-3"; level 2; havana_gene "OTTHUMG00000151244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12561 chr22 HAVANA transcript 23213686 23214214 . + . gene_id "ENSG00000211672.2"; transcript_id "ENST00000390318.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-3"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-3-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151244.1"; havana_transcript "OTTHUMT00000321849.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12562 chr22 HAVANA exon 23213686 23213763 . + . gene_id "ENSG00000211672.2"; transcript_id "ENST00000390318.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-3"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-3-001"; exon_number 1; exon_id "ENSE00001507819.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151244.1"; havana_transcript "OTTHUMT00000321849.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12563 chr22 HAVANA CDS 23213718 23213763 . + 0 gene_id "ENSG00000211672.2"; transcript_id "ENST00000390318.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-3"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-3-001"; exon_number 1; exon_id "ENSE00001507819.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151244.1"; havana_transcript "OTTHUMT00000321849.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12564 chr22 HAVANA start_codon 23213718 23213720 . + 0 gene_id "ENSG00000211672.2"; transcript_id "ENST00000390318.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-3"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-3-001"; exon_number 1; exon_id "ENSE00001507819.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151244.1"; havana_transcript "OTTHUMT00000321849.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12565 chr22 HAVANA exon 23213890 23214214 . + . gene_id "ENSG00000211672.2"; transcript_id "ENST00000390318.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-3"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-3-001"; exon_number 2; exon_id "ENSE00001507820.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151244.1"; havana_transcript "OTTHUMT00000321849.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12566 chr22 HAVANA CDS 23213890 23214209 . + 2 gene_id "ENSG00000211672.2"; transcript_id "ENST00000390318.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-3"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-3-001"; exon_number 2; exon_id "ENSE00001507820.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151244.1"; havana_transcript "OTTHUMT00000321849.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12567 chr22 HAVANA stop_codon 23214210 23214212 . + 0 gene_id "ENSG00000211672.2"; transcript_id "ENST00000390318.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-3"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-3-001"; exon_number 2; exon_id "ENSE00001507820.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151244.1"; havana_transcript "OTTHUMT00000321849.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12568 chr22 HAVANA UTR 23213686 23213717 . + . gene_id "ENSG00000211672.2"; transcript_id "ENST00000390318.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-3"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-3-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151244.1"; havana_transcript "OTTHUMT00000321849.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12569 chr22 HAVANA UTR 23214210 23214214 . + . gene_id "ENSG00000211672.2"; transcript_id "ENST00000390318.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV4-3"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV4-3-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151244.1"; havana_transcript "OTTHUMT00000321849.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12570 chr22 HAVANA gene 23215391 23215619 . + . gene_id "ENSG00000253963.1"; transcript_id "ENSG00000253963.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-2"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-2"; level 2; havana_gene "OTTHUMG00000151212.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12571 chr22 HAVANA transcript 23215391 23215619 . + . gene_id "ENSG00000253963.1"; transcript_id "ENST00000519345.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-2"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-2-001"; level 2; havana_gene "OTTHUMG00000151212.1"; havana_transcript "OTTHUMT00000321816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12572 chr22 HAVANA exon 23215391 23215619 . + . gene_id "ENSG00000253963.1"; transcript_id "ENST00000519345.1"; gene_type "IG_V_pseudogene"; gene_status "KNOWN"; gene_name "IGLV3-2"; transcript_type "IG_V_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLV3-2-001"; exon_number 1; exon_id "ENSE00002117765.1"; level 2; havana_gene "OTTHUMG00000151212.1"; havana_transcript "OTTHUMT00000321816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12573 chr22 HAVANA gene 23222886 23223576 . + . gene_id "ENSG00000211673.2"; transcript_id "ENSG00000211673.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-1"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-1"; level 2; havana_gene "OTTHUMG00000151224.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12574 chr22 HAVANA transcript 23222886 23223576 . + . gene_id "ENSG00000211673.2"; transcript_id "ENST00000390319.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-1"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-1-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151224.2"; havana_transcript "OTTHUMT00000321828.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12575 chr22 HAVANA exon 23222886 23222983 . + . gene_id "ENSG00000211673.2"; transcript_id "ENST00000390319.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-1"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-1-001"; exon_number 1; exon_id "ENSE00001945956.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151224.2"; havana_transcript "OTTHUMT00000321828.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12576 chr22 HAVANA CDS 23222938 23222983 . + 0 gene_id "ENSG00000211673.2"; transcript_id "ENST00000390319.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-1"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-1-001"; exon_number 1; exon_id "ENSE00001945956.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151224.2"; havana_transcript "OTTHUMT00000321828.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12577 chr22 HAVANA start_codon 23222938 23222940 . + 0 gene_id "ENSG00000211673.2"; transcript_id "ENST00000390319.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-1"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-1-001"; exon_number 1; exon_id "ENSE00001945956.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151224.2"; havana_transcript "OTTHUMT00000321828.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12578 chr22 HAVANA exon 23223277 23223576 . + . gene_id "ENSG00000211673.2"; transcript_id "ENST00000390319.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-1"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-1-001"; exon_number 2; exon_id "ENSE00002039182.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151224.2"; havana_transcript "OTTHUMT00000321828.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12579 chr22 HAVANA CDS 23223277 23223576 . + 2 gene_id "ENSG00000211673.2"; transcript_id "ENST00000390319.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-1"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-1-001"; exon_number 2; exon_id "ENSE00002039182.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151224.2"; havana_transcript "OTTHUMT00000321828.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12580 chr22 HAVANA UTR 23222886 23222937 . + . gene_id "ENSG00000211673.2"; transcript_id "ENST00000390319.2"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGLV3-1"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGLV3-1-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151224.2"; havana_transcript "OTTHUMT00000321828.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12581 chr22 ENSEMBL gene 23228447 23228559 . + . gene_id "ENSG00000264824.1"; transcript_id "ENSG00000264824.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "hsa-mir-5571"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "hsa-mir-5571"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12582 chr22 ENSEMBL transcript 23228447 23228559 . + . gene_id "ENSG00000264824.1"; transcript_id "ENST00000577998.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "hsa-mir-5571"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "hsa-mir-5571.1-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12583 chr22 ENSEMBL exon 23228447 23228559 . + . gene_id "ENSG00000264824.1"; transcript_id "ENST00000577998.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "hsa-mir-5571"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "hsa-mir-5571.1-201"; exon_number 1; exon_id "ENSE00002720548.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12584 chr22 HAVANA gene 23229960 23238287 . + . gene_id "ENSG00000254709.2"; transcript_id "ENSG00000254709.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5"; level 2; havana_gene "OTTHUMG00000165670.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12585 chr22 HAVANA transcript 23229960 23238005 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000526893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-002"; level 2; tag "basic"; tag "appris_candidate"; tag "readthrough_transcript"; tag "CCDS"; ccdsid "CCDS54506.1"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12586 chr22 HAVANA exon 23229960 23230439 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000526893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-002"; exon_number 1; exon_id "ENSE00002153141.1"; level 2; tag "basic"; tag "appris_candidate"; tag "readthrough_transcript"; tag "CCDS"; ccdsid "CCDS54506.1"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12587 chr22 HAVANA CDS 23230234 23230439 . + 0 gene_id "ENSG00000254709.2"; transcript_id "ENST00000526893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-002"; exon_number 1; exon_id "ENSE00002153141.1"; level 2; tag "basic"; tag "appris_candidate"; tag "readthrough_transcript"; tag "CCDS"; ccdsid "CCDS54506.1"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12588 chr22 HAVANA start_codon 23230234 23230236 . + 0 gene_id "ENSG00000254709.2"; transcript_id "ENST00000526893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-002"; exon_number 1; exon_id "ENSE00002153141.1"; level 2; tag "basic"; tag "appris_candidate"; tag "readthrough_transcript"; tag "CCDS"; ccdsid "CCDS54506.1"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12589 chr22 HAVANA exon 23235880 23235998 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000526893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-002"; exon_number 2; exon_id "ENSE00002167426.1"; level 2; tag "basic"; tag "appris_candidate"; tag "readthrough_transcript"; tag "CCDS"; ccdsid "CCDS54506.1"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12590 chr22 HAVANA CDS 23235880 23235998 . + 1 gene_id "ENSG00000254709.2"; transcript_id "ENST00000526893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-002"; exon_number 2; exon_id "ENSE00002167426.1"; level 2; tag "basic"; tag "appris_candidate"; tag "readthrough_transcript"; tag "CCDS"; ccdsid "CCDS54506.1"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12591 chr22 HAVANA exon 23237555 23238005 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000526893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-002"; exon_number 3; exon_id "ENSE00003661571.1"; level 2; tag "basic"; tag "appris_candidate"; tag "readthrough_transcript"; tag "CCDS"; ccdsid "CCDS54506.1"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12592 chr22 HAVANA CDS 23237555 23237871 . + 2 gene_id "ENSG00000254709.2"; transcript_id "ENST00000526893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-002"; exon_number 3; exon_id "ENSE00003661571.1"; level 2; tag "basic"; tag "appris_candidate"; tag "readthrough_transcript"; tag "CCDS"; ccdsid "CCDS54506.1"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12593 chr22 HAVANA stop_codon 23237872 23237874 . + 0 gene_id "ENSG00000254709.2"; transcript_id "ENST00000526893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-002"; exon_number 3; exon_id "ENSE00003661571.1"; level 2; tag "basic"; tag "appris_candidate"; tag "readthrough_transcript"; tag "CCDS"; ccdsid "CCDS54506.1"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12594 chr22 HAVANA UTR 23229960 23230233 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000526893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-002"; level 2; tag "basic"; tag "appris_candidate"; tag "readthrough_transcript"; tag "CCDS"; ccdsid "CCDS54506.1"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12595 chr22 HAVANA UTR 23237872 23238005 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000526893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-002"; level 2; tag "basic"; tag "appris_candidate"; tag "readthrough_transcript"; tag "CCDS"; ccdsid "CCDS54506.1"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12596 chr22 HAVANA transcript 23229960 23238287 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000532223.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385698.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12597 chr22 HAVANA exon 23229960 23230439 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000532223.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-001"; exon_number 1; exon_id "ENSE00002153141.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385698.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12598 chr22 HAVANA CDS 23230234 23230439 . + 0 gene_id "ENSG00000254709.2"; transcript_id "ENST00000532223.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-001"; exon_number 1; exon_id "ENSE00002153141.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385698.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12599 chr22 HAVANA start_codon 23230234 23230236 . + 0 gene_id "ENSG00000254709.2"; transcript_id "ENST00000532223.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-001"; exon_number 1; exon_id "ENSE00002153141.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385698.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12600 chr22 HAVANA exon 23235877 23235998 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000532223.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-001"; exon_number 2; exon_id "ENSE00002171947.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385698.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12601 chr22 HAVANA CDS 23235877 23235998 . + 1 gene_id "ENSG00000254709.2"; transcript_id "ENST00000532223.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-001"; exon_number 2; exon_id "ENSE00002171947.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385698.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12602 chr22 HAVANA exon 23237555 23238287 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000532223.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-001"; exon_number 3; exon_id "ENSE00003702621.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385698.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12603 chr22 HAVANA CDS 23237555 23237871 . + 2 gene_id "ENSG00000254709.2"; transcript_id "ENST00000532223.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-001"; exon_number 3; exon_id "ENSE00003702621.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385698.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12604 chr22 HAVANA stop_codon 23237872 23237874 . + 0 gene_id "ENSG00000254709.2"; transcript_id "ENST00000532223.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-001"; exon_number 3; exon_id "ENSE00003702621.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385698.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12605 chr22 HAVANA UTR 23229960 23230233 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000532223.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385698.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12606 chr22 HAVANA UTR 23237872 23238287 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000532223.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL5-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385698.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12607 chr22 HAVANA transcript 23230009 23238005 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000531372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL5-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385700.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12608 chr22 HAVANA exon 23230009 23230439 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000531372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL5-003"; exon_number 1; exon_id "ENSE00002189715.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385700.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12609 chr22 HAVANA CDS 23230234 23230439 . + 0 gene_id "ENSG00000254709.2"; transcript_id "ENST00000531372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL5-003"; exon_number 1; exon_id "ENSE00002189715.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385700.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12610 chr22 HAVANA start_codon 23230234 23230236 . + 0 gene_id "ENSG00000254709.2"; transcript_id "ENST00000531372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL5-003"; exon_number 1; exon_id "ENSE00002189715.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385700.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12611 chr22 HAVANA exon 23237555 23238005 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000531372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL5-003"; exon_number 2; exon_id "ENSE00003467736.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385700.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12612 chr22 HAVANA CDS 23237555 23237600 . + 1 gene_id "ENSG00000254709.2"; transcript_id "ENST00000531372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL5-003"; exon_number 2; exon_id "ENSE00003467736.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385700.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12613 chr22 HAVANA stop_codon 23237601 23237603 . + 0 gene_id "ENSG00000254709.2"; transcript_id "ENST00000531372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL5-003"; exon_number 2; exon_id "ENSE00003467736.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385700.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12614 chr22 HAVANA UTR 23230009 23230233 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000531372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL5-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385700.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12615 chr22 HAVANA UTR 23237601 23238005 . + . gene_id "ENSG00000254709.2"; transcript_id "ENST00000531372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL5-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000165670.2"; havana_transcript "OTTHUMT00000385700.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12616 chr22 HAVANA gene 23235872 23235998 . + . gene_id "ENSG00000211674.2"; transcript_id "ENSG00000211674.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ1"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ1"; level 2; havana_gene "OTTHUMG00000151225.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12617 chr22 HAVANA transcript 23235872 23235998 . + . gene_id "ENSG00000211674.2"; transcript_id "ENST00000390320.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ1"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ1-001"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151225.1"; havana_transcript "OTTHUMT00000321829.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12618 chr22 HAVANA exon 23235872 23235998 . + . gene_id "ENSG00000211674.2"; transcript_id "ENST00000390320.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ1"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ1-001"; exon_number 1; exon_id "ENSE00001507823.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151225.1"; havana_transcript "OTTHUMT00000321829.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12619 chr22 HAVANA CDS 23235872 23235995 . + 0 gene_id "ENSG00000211674.2"; transcript_id "ENST00000390320.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ1"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ1-001"; exon_number 1; exon_id "ENSE00001507823.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151225.1"; havana_transcript "OTTHUMT00000321829.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12620 chr22 HAVANA stop_codon 23235996 23235998 . + 0 gene_id "ENSG00000211674.2"; transcript_id "ENST00000390320.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ1"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ1-001"; exon_number 1; exon_id "ENSE00001507823.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151225.1"; havana_transcript "OTTHUMT00000321829.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12621 chr22 HAVANA UTR 23235996 23235998 . + . gene_id "ENSG00000211674.2"; transcript_id "ENST00000390320.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ1"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ1-001"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151225.1"; havana_transcript "OTTHUMT00000321829.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12622 chr22 HAVANA gene 23237555 23238014 . + . gene_id "ENSG00000211675.2"; transcript_id "ENSG00000211675.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC1"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC1"; level 2; havana_gene "OTTHUMG00000151218.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12623 chr22 HAVANA transcript 23237555 23238014 . + . gene_id "ENSG00000211675.2"; transcript_id "ENST00000390321.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC1"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC1-001"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151218.3"; havana_transcript "OTTHUMT00000321822.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12624 chr22 HAVANA exon 23237555 23238014 . + . gene_id "ENSG00000211675.2"; transcript_id "ENST00000390321.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC1"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC1-001"; exon_number 1; exon_id "ENSE00001662310.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151218.3"; havana_transcript "OTTHUMT00000321822.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12625 chr22 HAVANA CDS 23237555 23237871 . + 2 gene_id "ENSG00000211675.2"; transcript_id "ENST00000390321.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC1"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC1-001"; exon_number 1; exon_id "ENSE00001662310.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151218.3"; havana_transcript "OTTHUMT00000321822.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12626 chr22 HAVANA stop_codon 23237872 23237874 . + 0 gene_id "ENSG00000211675.2"; transcript_id "ENST00000390321.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC1"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC1-001"; exon_number 1; exon_id "ENSE00001662310.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151218.3"; havana_transcript "OTTHUMT00000321822.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12627 chr22 HAVANA UTR 23237872 23238014 . + . gene_id "ENSG00000211675.2"; transcript_id "ENST00000390321.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC1"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC1-001"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151218.3"; havana_transcript "OTTHUMT00000321822.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12628 chr22 HAVANA gene 23241661 23241835 . + . gene_id "ENSG00000211676.2"; transcript_id "ENSG00000211676.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ2"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ2"; level 2; havana_gene "OTTHUMG00000151243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12629 chr22 HAVANA transcript 23241661 23241835 . + . gene_id "ENSG00000211676.2"; transcript_id "ENST00000390322.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ2"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ2-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151243.1"; havana_transcript "OTTHUMT00000321848.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12630 chr22 HAVANA exon 23241661 23241835 . + . gene_id "ENSG00000211676.2"; transcript_id "ENST00000390322.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ2"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ2-001"; exon_number 1; exon_id "ENSE00001507825.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151243.1"; havana_transcript "OTTHUMT00000321848.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12631 chr22 HAVANA CDS 23241694 23241832 . + 0 gene_id "ENSG00000211676.2"; transcript_id "ENST00000390322.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ2"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ2-001"; exon_number 1; exon_id "ENSE00001507825.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151243.1"; havana_transcript "OTTHUMT00000321848.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12632 chr22 HAVANA start_codon 23241694 23241696 . + 0 gene_id "ENSG00000211676.2"; transcript_id "ENST00000390322.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ2"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ2-001"; exon_number 1; exon_id "ENSE00001507825.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151243.1"; havana_transcript "OTTHUMT00000321848.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12633 chr22 HAVANA stop_codon 23241833 23241835 . + 0 gene_id "ENSG00000211676.2"; transcript_id "ENST00000390322.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ2"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ2-001"; exon_number 1; exon_id "ENSE00001507825.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151243.1"; havana_transcript "OTTHUMT00000321848.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12634 chr22 HAVANA UTR 23241661 23241693 . + . gene_id "ENSG00000211676.2"; transcript_id "ENST00000390322.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ2"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ2-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151243.1"; havana_transcript "OTTHUMT00000321848.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12635 chr22 HAVANA UTR 23241833 23241835 . + . gene_id "ENSG00000211676.2"; transcript_id "ENST00000390322.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ2"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ2-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151243.1"; havana_transcript "OTTHUMT00000321848.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12636 chr22 HAVANA gene 23243156 23243617 . + . gene_id "ENSG00000211677.2"; transcript_id "ENSG00000211677.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC2"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC2"; level 2; havana_gene "OTTHUMG00000151214.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12637 chr22 HAVANA transcript 23243156 23243617 . + . gene_id "ENSG00000211677.2"; transcript_id "ENST00000390323.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC2"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC2-001"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151214.3"; havana_transcript "OTTHUMT00000321818.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12638 chr22 HAVANA exon 23243156 23243617 . + . gene_id "ENSG00000211677.2"; transcript_id "ENST00000390323.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC2"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC2-001"; exon_number 1; exon_id "ENSE00001721671.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151214.3"; havana_transcript "OTTHUMT00000321818.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12639 chr22 HAVANA CDS 23243156 23243472 . + 2 gene_id "ENSG00000211677.2"; transcript_id "ENST00000390323.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC2"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC2-001"; exon_number 1; exon_id "ENSE00001721671.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151214.3"; havana_transcript "OTTHUMT00000321818.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12640 chr22 HAVANA stop_codon 23243473 23243475 . + 0 gene_id "ENSG00000211677.2"; transcript_id "ENST00000390323.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC2"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC2-001"; exon_number 1; exon_id "ENSE00001721671.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151214.3"; havana_transcript "OTTHUMT00000321818.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12641 chr22 HAVANA UTR 23243473 23243617 . + . gene_id "ENSG00000211677.2"; transcript_id "ENST00000390323.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC2"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC2-001"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151214.3"; havana_transcript "OTTHUMT00000321818.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12642 chr22 HAVANA gene 23247030 23247205 . + . gene_id "ENSG00000211678.2"; transcript_id "ENSG00000211678.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ3"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ3"; level 2; havana_gene "OTTHUMG00000151220.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12643 chr22 HAVANA transcript 23247030 23247205 . + . gene_id "ENSG00000211678.2"; transcript_id "ENST00000390324.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ3"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ3-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151220.1"; havana_transcript "OTTHUMT00000321824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12644 chr22 HAVANA exon 23247030 23247205 . + . gene_id "ENSG00000211678.2"; transcript_id "ENST00000390324.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ3"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ3-001"; exon_number 1; exon_id "ENSE00001507827.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151220.1"; havana_transcript "OTTHUMT00000321824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12645 chr22 HAVANA CDS 23247055 23247202 . + 0 gene_id "ENSG00000211678.2"; transcript_id "ENST00000390324.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ3"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ3-001"; exon_number 1; exon_id "ENSE00001507827.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151220.1"; havana_transcript "OTTHUMT00000321824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12646 chr22 HAVANA start_codon 23247055 23247057 . + 0 gene_id "ENSG00000211678.2"; transcript_id "ENST00000390324.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ3"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ3-001"; exon_number 1; exon_id "ENSE00001507827.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151220.1"; havana_transcript "OTTHUMT00000321824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12647 chr22 HAVANA stop_codon 23247203 23247205 . + 0 gene_id "ENSG00000211678.2"; transcript_id "ENST00000390324.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ3"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ3-001"; exon_number 1; exon_id "ENSE00001507827.2"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151220.1"; havana_transcript "OTTHUMT00000321824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12648 chr22 HAVANA UTR 23247030 23247054 . + . gene_id "ENSG00000211678.2"; transcript_id "ENST00000390324.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ3"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ3-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151220.1"; havana_transcript "OTTHUMT00000321824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12649 chr22 HAVANA UTR 23247203 23247205 . + . gene_id "ENSG00000211678.2"; transcript_id "ENST00000390324.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ3"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ3-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151220.1"; havana_transcript "OTTHUMT00000321824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12650 chr22 HAVANA gene 23248512 23248973 . + . gene_id "ENSG00000211679.2"; transcript_id "ENSG00000211679.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC3"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC3"; level 2; havana_gene "OTTHUMG00000151217.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12651 chr22 HAVANA transcript 23248512 23248973 . + . gene_id "ENSG00000211679.2"; transcript_id "ENST00000390325.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC3"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC3-001"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151217.3"; havana_transcript "OTTHUMT00000321821.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12652 chr22 HAVANA exon 23248512 23248973 . + . gene_id "ENSG00000211679.2"; transcript_id "ENST00000390325.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC3"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC3-001"; exon_number 1; exon_id "ENSE00001623375.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151217.3"; havana_transcript "OTTHUMT00000321821.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12653 chr22 HAVANA CDS 23248512 23248828 . + 2 gene_id "ENSG00000211679.2"; transcript_id "ENST00000390325.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC3"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC3-001"; exon_number 1; exon_id "ENSE00001623375.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151217.3"; havana_transcript "OTTHUMT00000321821.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12654 chr22 HAVANA stop_codon 23248829 23248831 . + 0 gene_id "ENSG00000211679.2"; transcript_id "ENST00000390325.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC3"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC3-001"; exon_number 1; exon_id "ENSE00001623375.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151217.3"; havana_transcript "OTTHUMT00000321821.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12655 chr22 HAVANA UTR 23248829 23248973 . + . gene_id "ENSG00000211679.2"; transcript_id "ENST00000390325.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC3"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC3-001"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151217.3"; havana_transcript "OTTHUMT00000321821.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12656 chr22 HAVANA gene 23252744 23252776 . + . gene_id "ENSG00000211680.2"; transcript_id "ENSG00000211680.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ4"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ4"; level 2; havana_gene "OTTHUMG00000151184.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12657 chr22 HAVANA transcript 23252744 23252776 . + . gene_id "ENSG00000211680.2"; transcript_id "ENST00000390326.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ4"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ4-001"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151184.1"; havana_transcript "OTTHUMT00000321670.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12658 chr22 HAVANA exon 23252744 23252776 . + . gene_id "ENSG00000211680.2"; transcript_id "ENST00000390326.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ4"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ4-001"; exon_number 1; exon_id "ENSE00001507829.2"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151184.1"; havana_transcript "OTTHUMT00000321670.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12659 chr22 HAVANA CDS 23252744 23252776 . + 0 gene_id "ENSG00000211680.2"; transcript_id "ENST00000390326.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ4"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ4-001"; exon_number 1; exon_id "ENSE00001507829.2"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151184.1"; havana_transcript "OTTHUMT00000321670.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12660 chr22 HAVANA gene 23252998 23253245 . + . gene_id "ENSG00000254029.1"; transcript_id "ENSG00000254029.1"; gene_type "IG_C_pseudogene"; gene_status "KNOWN"; gene_name "IGLC4"; transcript_type "IG_C_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLC4"; level 2; havana_gene "OTTHUMG00000151180.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12661 chr22 HAVANA transcript 23252998 23253245 . + . gene_id "ENSG00000254029.1"; transcript_id "ENST00000517690.1"; gene_type "IG_C_pseudogene"; gene_status "KNOWN"; gene_name "IGLC4"; transcript_type "IG_C_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLC4-001"; level 2; havana_gene "OTTHUMG00000151180.1"; havana_transcript "OTTHUMT00000321666.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12662 chr22 HAVANA exon 23252998 23253245 . + . gene_id "ENSG00000254029.1"; transcript_id "ENST00000517690.1"; gene_type "IG_C_pseudogene"; gene_status "KNOWN"; gene_name "IGLC4"; transcript_type "IG_C_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLC4-001"; exon_number 1; exon_id "ENSE00002105227.1"; level 2; havana_gene "OTTHUMG00000151180.1"; havana_transcript "OTTHUMT00000321666.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12663 chr22 HAVANA gene 23256408 23256479 . + . gene_id "ENSG00000211681.2"; transcript_id "ENSG00000211681.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ5"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ5"; level 2; havana_gene "OTTHUMG00000151170.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12664 chr22 HAVANA transcript 23256408 23256479 . + . gene_id "ENSG00000211681.2"; transcript_id "ENST00000390327.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ5"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ5-001"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151170.1"; havana_transcript "OTTHUMT00000321640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12665 chr22 HAVANA exon 23256408 23256479 . + . gene_id "ENSG00000211681.2"; transcript_id "ENST00000390327.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ5"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ5-001"; exon_number 1; exon_id "ENSE00001507830.2"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151170.1"; havana_transcript "OTTHUMT00000321640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12666 chr22 HAVANA CDS 23256408 23256479 . + 0 gene_id "ENSG00000211681.2"; transcript_id "ENST00000390327.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ5"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ5-001"; exon_number 1; exon_id "ENSE00001507830.2"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151170.1"; havana_transcript "OTTHUMT00000321640.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12667 chr22 HAVANA gene 23257805 23258097 . + . gene_id "ENSG00000254030.1"; transcript_id "ENSG00000254030.1"; gene_type "IG_C_pseudogene"; gene_status "KNOWN"; gene_name "IGLC5"; transcript_type "IG_C_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLC5"; level 2; havana_gene "OTTHUMG00000151176.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12668 chr22 HAVANA transcript 23257805 23258097 . + . gene_id "ENSG00000254030.1"; transcript_id "ENST00000519670.1"; gene_type "IG_C_pseudogene"; gene_status "KNOWN"; gene_name "IGLC5"; transcript_type "IG_C_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLC5-001"; level 2; havana_gene "OTTHUMG00000151176.1"; havana_transcript "OTTHUMT00000321661.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12669 chr22 HAVANA exon 23257805 23258097 . + . gene_id "ENSG00000254030.1"; transcript_id "ENST00000519670.1"; gene_type "IG_C_pseudogene"; gene_status "KNOWN"; gene_name "IGLC5"; transcript_type "IG_C_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLC5-001"; exon_number 1; exon_id "ENSE00002089668.1"; level 2; havana_gene "OTTHUMG00000151176.1"; havana_transcript "OTTHUMT00000321661.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12670 chr22 HAVANA gene 23260304 23260373 . + . gene_id "ENSG00000211682.2"; transcript_id "ENSG00000211682.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ6"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ6"; level 2; havana_gene "OTTHUMG00000151181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12671 chr22 HAVANA transcript 23260304 23260373 . + . gene_id "ENSG00000211682.2"; transcript_id "ENST00000390328.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ6"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ6-001"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151181.1"; havana_transcript "OTTHUMT00000321667.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12672 chr22 HAVANA exon 23260304 23260373 . + . gene_id "ENSG00000211682.2"; transcript_id "ENST00000390328.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ6"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ6-001"; exon_number 1; exon_id "ENSE00001507831.2"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151181.1"; havana_transcript "OTTHUMT00000321667.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12673 chr22 HAVANA CDS 23260304 23260373 . + 0 gene_id "ENSG00000211682.2"; transcript_id "ENST00000390328.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ6"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ6-001"; exon_number 1; exon_id "ENSE00001507831.2"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151181.1"; havana_transcript "OTTHUMT00000321667.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12674 chr22 HAVANA gene 23261707 23262023 . + . gene_id "ENSG00000222037.5"; transcript_id "ENSG00000222037.5"; gene_type "IG_C_pseudogene"; gene_status "KNOWN"; gene_name "IGLC6"; transcript_type "IG_C_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLC6"; level 2; havana_gene "OTTHUMG00000151165.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12675 chr22 HAVANA transcript 23261707 23262023 . + . gene_id "ENSG00000222037.5"; transcript_id "ENST00000410078.2"; gene_type "IG_C_pseudogene"; gene_status "KNOWN"; gene_name "IGLC6"; transcript_type "IG_C_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLC6-001"; level 2; havana_gene "OTTHUMG00000151165.1"; havana_transcript "OTTHUMT00000321634.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12676 chr22 HAVANA exon 23261707 23262023 . + . gene_id "ENSG00000222037.5"; transcript_id "ENST00000410078.2"; gene_type "IG_C_pseudogene"; gene_status "KNOWN"; gene_name "IGLC6"; transcript_type "IG_C_pseudogene"; transcript_status "KNOWN"; transcript_name "IGLC6-001"; exon_number 1; exon_id "ENSE00002107859.1"; level 2; havana_gene "OTTHUMG00000151165.1"; havana_transcript "OTTHUMT00000321634.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12677 chr22 HAVANA gene 23263562 23263607 . + . gene_id "ENSG00000211684.2"; transcript_id "ENSG00000211684.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ7"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ7"; level 2; havana_gene "OTTHUMG00000151167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12678 chr22 HAVANA transcript 23263562 23263607 . + . gene_id "ENSG00000211684.2"; transcript_id "ENST00000390330.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ7"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ7-001"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151167.1"; havana_transcript "OTTHUMT00000321636.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12679 chr22 HAVANA exon 23263562 23263607 . + . gene_id "ENSG00000211684.2"; transcript_id "ENST00000390330.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ7"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ7-001"; exon_number 1; exon_id "ENSE00001507834.2"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151167.1"; havana_transcript "OTTHUMT00000321636.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12680 chr22 HAVANA CDS 23263562 23263607 . + 0 gene_id "ENSG00000211684.2"; transcript_id "ENST00000390330.2"; gene_type "IG_J_gene"; gene_status "KNOWN"; gene_name "IGLJ7"; transcript_type "IG_J_gene"; transcript_status "KNOWN"; transcript_name "IGLJ7-001"; exon_number 1; exon_id "ENSE00001507834.2"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151167.1"; havana_transcript "OTTHUMT00000321636.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12681 chr22 HAVANA gene 23264766 23265203 . + . gene_id "ENSG00000211685.2"; transcript_id "ENSG00000211685.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC7"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC7"; level 2; havana_gene "OTTHUMG00000151017.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12682 chr22 HAVANA transcript 23264766 23265203 . + . gene_id "ENSG00000211685.2"; transcript_id "ENST00000390331.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC7"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC7-001"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151017.4"; havana_transcript "OTTHUMT00000320966.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12683 chr22 HAVANA exon 23264766 23265203 . + . gene_id "ENSG00000211685.2"; transcript_id "ENST00000390331.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC7"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC7-001"; exon_number 1; exon_id "ENSE00001665273.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151017.4"; havana_transcript "OTTHUMT00000320966.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12684 chr22 HAVANA CDS 23264766 23265082 . + 2 gene_id "ENSG00000211685.2"; transcript_id "ENST00000390331.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC7"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC7-001"; exon_number 1; exon_id "ENSE00001665273.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151017.4"; havana_transcript "OTTHUMT00000320966.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12685 chr22 HAVANA stop_codon 23265083 23265085 . + 0 gene_id "ENSG00000211685.2"; transcript_id "ENST00000390331.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC7"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC7-001"; exon_number 1; exon_id "ENSE00001665273.2"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151017.4"; havana_transcript "OTTHUMT00000320966.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12686 chr22 HAVANA UTR 23265083 23265203 . + . gene_id "ENSG00000211685.2"; transcript_id "ENST00000390331.2"; gene_type "IG_C_gene"; gene_status "KNOWN"; gene_name "IGLC7"; transcript_type "IG_C_gene"; transcript_status "KNOWN"; transcript_name "IGLC7-001"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000151017.4"; havana_transcript "OTTHUMT00000320966.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12687 chr22 HAVANA gene 23330438 23330756 . + . gene_id "ENSG00000237472.1"; transcript_id "ENSG00000237472.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000361.2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000361.2"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000151014.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12688 chr22 HAVANA transcript 23330438 23330756 . + . gene_id "ENSG00000237472.1"; transcript_id "ENST00000415639.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000361.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000361.2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000151014.1"; havana_transcript "OTTHUMT00000320956.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12689 chr22 HAVANA exon 23330438 23330756 . + . gene_id "ENSG00000237472.1"; transcript_id "ENST00000415639.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000361.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000361.2-001"; exon_number 1; exon_id "ENSE00001727066.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000151014.1"; havana_transcript "OTTHUMT00000320956.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12690 chr22 HAVANA gene 23332865 23350523 . + . gene_id "ENSG00000223679.1"; transcript_id "ENSG00000223679.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000362.1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000362.1"; level 2; havana_gene "OTTHUMG00000155698.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12691 chr22 HAVANA transcript 23332865 23350523 . + . gene_id "ENSG00000223679.1"; transcript_id "ENST00000420944.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000362.1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000362.1-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000155698.1"; havana_transcript "OTTHUMT00000341297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12692 chr22 HAVANA exon 23332865 23332952 . + . gene_id "ENSG00000223679.1"; transcript_id "ENST00000420944.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000362.1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000362.1-001"; exon_number 1; exon_id "ENSE00001605187.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000155698.1"; havana_transcript "OTTHUMT00000341297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12693 chr22 HAVANA exon 23336329 23336395 . + . gene_id "ENSG00000223679.1"; transcript_id "ENST00000420944.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000362.1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000362.1-001"; exon_number 2; exon_id "ENSE00001714217.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000155698.1"; havana_transcript "OTTHUMT00000341297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12694 chr22 HAVANA exon 23350421 23350523 . + . gene_id "ENSG00000223679.1"; transcript_id "ENST00000420944.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000362.1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000362.1-001"; exon_number 3; exon_id "ENSE00001710150.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000155698.1"; havana_transcript "OTTHUMT00000341297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12695 chr22 HAVANA gene 23401593 23487208 . - . gene_id "ENSG00000100218.7"; transcript_id "ENSG00000100218.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1"; level 1; tag "ncRNA_host"; havana_gene "OTTHUMG00000150602.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12696 chr22 HAVANA transcript 23401593 23484280 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12697 chr22 HAVANA exon 23484136 23484280 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 1; exon_id "ENSE00001867945.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12698 chr22 HAVANA exon 23482409 23482659 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 2; exon_id "ENSE00001154494.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12699 chr22 HAVANA CDS 23482409 23482607 . - 0 gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 2; exon_id "ENSE00001154494.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12700 chr22 HAVANA start_codon 23482605 23482607 . - 0 gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 2; exon_id "ENSE00001154494.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12701 chr22 HAVANA exon 23481027 23481129 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 3; exon_id "ENSE00000651217.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12702 chr22 HAVANA CDS 23481027 23481129 . - 2 gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 3; exon_id "ENSE00000651217.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12703 chr22 HAVANA exon 23476213 23476331 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 4; exon_id "ENSE00000651216.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12704 chr22 HAVANA CDS 23476213 23476331 . - 1 gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 4; exon_id "ENSE00000651216.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12705 chr22 HAVANA exon 23406080 23406311 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 5; exon_id "ENSE00000651213.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12706 chr22 HAVANA CDS 23406080 23406311 . - 2 gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 5; exon_id "ENSE00000651213.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12707 chr22 HAVANA exon 23403987 23404123 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 6; exon_id "ENSE00000651212.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12708 chr22 HAVANA CDS 23403987 23404123 . - 1 gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 6; exon_id "ENSE00000651212.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12709 chr22 HAVANA exon 23401593 23401896 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 7; exon_id "ENSE00001154490.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12710 chr22 HAVANA CDS 23401643 23401896 . - 2 gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 7; exon_id "ENSE00001154490.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12711 chr22 HAVANA stop_codon 23401640 23401642 . - 0 gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; exon_number 7; exon_id "ENSE00001154490.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12712 chr22 HAVANA UTR 23484136 23484280 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12713 chr22 HAVANA UTR 23482608 23482659 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12714 chr22 HAVANA UTR 23401593 23401642 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000216036.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RTDR1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13803.1"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319049.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12715 chr22 HAVANA transcript 23466414 23476261 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000421213.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319071.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12716 chr22 HAVANA exon 23476213 23476261 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000421213.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-004"; exon_number 1; exon_id "ENSE00001750913.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319071.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12717 chr22 HAVANA CDS 23476213 23476261 . - 0 gene_id "ENSG00000100218.7"; transcript_id "ENST00000421213.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-004"; exon_number 1; exon_id "ENSE00001750913.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319071.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12718 chr22 HAVANA exon 23466414 23466687 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000421213.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-004"; exon_number 2; exon_id "ENSE00001715932.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319071.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12719 chr22 HAVANA CDS 23466518 23466687 . - 2 gene_id "ENSG00000100218.7"; transcript_id "ENST00000421213.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-004"; exon_number 2; exon_id "ENSE00001715932.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319071.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12720 chr22 HAVANA stop_codon 23466515 23466517 . - 0 gene_id "ENSG00000100218.7"; transcript_id "ENST00000421213.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-004"; exon_number 2; exon_id "ENSE00001715932.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319071.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12721 chr22 HAVANA UTR 23466414 23466517 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000421213.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319071.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12722 chr22 HAVANA transcript 23473364 23481101 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000439064.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-005"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319072.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12723 chr22 HAVANA exon 23481027 23481101 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000439064.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-005"; exon_number 1; exon_id "ENSE00001675055.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319072.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12724 chr22 HAVANA CDS 23481027 23481101 . - 1 gene_id "ENSG00000100218.7"; transcript_id "ENST00000439064.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-005"; exon_number 1; exon_id "ENSE00001675055.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319072.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12725 chr22 HAVANA exon 23476213 23476331 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000439064.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-005"; exon_number 2; exon_id "ENSE00000651216.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319072.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12726 chr22 HAVANA CDS 23476213 23476331 . - 1 gene_id "ENSG00000100218.7"; transcript_id "ENST00000439064.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-005"; exon_number 2; exon_id "ENSE00000651216.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319072.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12727 chr22 HAVANA exon 23473364 23473864 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000439064.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-005"; exon_number 3; exon_id "ENSE00001719366.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319072.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12728 chr22 HAVANA CDS 23473860 23473864 . - 2 gene_id "ENSG00000100218.7"; transcript_id "ENST00000439064.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-005"; exon_number 3; exon_id "ENSE00001719366.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319072.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12729 chr22 HAVANA stop_codon 23473857 23473859 . - 0 gene_id "ENSG00000100218.7"; transcript_id "ENST00000439064.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-005"; exon_number 3; exon_id "ENSE00001719366.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319072.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12730 chr22 HAVANA UTR 23473364 23473859 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000439064.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-005"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319072.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12731 chr22 HAVANA transcript 23478180 23482487 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000452757.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-003"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12732 chr22 HAVANA exon 23482409 23482487 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000452757.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-003"; exon_number 1; exon_id "ENSE00001722383.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12733 chr22 HAVANA CDS 23482409 23482487 . - 0 gene_id "ENSG00000100218.7"; transcript_id "ENST00000452757.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-003"; exon_number 1; exon_id "ENSE00001722383.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12734 chr22 HAVANA exon 23481027 23481129 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000452757.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-003"; exon_number 2; exon_id "ENSE00000651217.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12735 chr22 HAVANA CDS 23481027 23481129 . - 2 gene_id "ENSG00000100218.7"; transcript_id "ENST00000452757.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-003"; exon_number 2; exon_id "ENSE00000651217.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12736 chr22 HAVANA exon 23478180 23478506 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000452757.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-003"; exon_number 3; exon_id "ENSE00001664420.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12737 chr22 HAVANA CDS 23478488 23478506 . - 1 gene_id "ENSG00000100218.7"; transcript_id "ENST00000452757.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-003"; exon_number 3; exon_id "ENSE00001664420.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12738 chr22 HAVANA stop_codon 23478485 23478487 . - 0 gene_id "ENSG00000100218.7"; transcript_id "ENST00000452757.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-003"; exon_number 3; exon_id "ENSE00001664420.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12739 chr22 HAVANA UTR 23478180 23478487 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000452757.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-003"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319070.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12740 chr22 HAVANA transcript 23478385 23487208 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000406876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12741 chr22 HAVANA exon 23487169 23487208 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000406876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-002"; exon_number 1; exon_id "ENSE00001554371.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12742 chr22 HAVANA exon 23482409 23482659 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000406876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-002"; exon_number 2; exon_id "ENSE00001154494.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12743 chr22 HAVANA CDS 23482409 23482607 . - 0 gene_id "ENSG00000100218.7"; transcript_id "ENST00000406876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-002"; exon_number 2; exon_id "ENSE00001154494.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12744 chr22 HAVANA start_codon 23482605 23482607 . - 0 gene_id "ENSG00000100218.7"; transcript_id "ENST00000406876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-002"; exon_number 2; exon_id "ENSE00001154494.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12745 chr22 HAVANA exon 23481027 23481129 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000406876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-002"; exon_number 3; exon_id "ENSE00000651217.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12746 chr22 HAVANA CDS 23481027 23481129 . - 2 gene_id "ENSG00000100218.7"; transcript_id "ENST00000406876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-002"; exon_number 3; exon_id "ENSE00000651217.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12747 chr22 HAVANA exon 23478385 23478509 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000406876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-002"; exon_number 4; exon_id "ENSE00001558003.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12748 chr22 HAVANA CDS 23478488 23478509 . - 1 gene_id "ENSG00000100218.7"; transcript_id "ENST00000406876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-002"; exon_number 4; exon_id "ENSE00001558003.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12749 chr22 HAVANA stop_codon 23478485 23478487 . - 0 gene_id "ENSG00000100218.7"; transcript_id "ENST00000406876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-002"; exon_number 4; exon_id "ENSE00001558003.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12750 chr22 HAVANA UTR 23487169 23487208 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000406876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12751 chr22 HAVANA UTR 23482608 23482659 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000406876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12752 chr22 HAVANA UTR 23478385 23478487 . - . gene_id "ENSG00000100218.7"; transcript_id "ENST00000406876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RTDR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RTDR1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150602.3"; havana_transcript "OTTHUMT00000319050.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12753 chr22 HAVANA gene 23412540 23467224 . + . gene_id "ENSG00000128266.7"; transcript_id "ENSG00000128266.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNAZ"; level 2; havana_gene "OTTHUMG00000150611.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12754 chr22 HAVANA transcript 23412540 23467224 . + . gene_id "ENSG00000128266.7"; transcript_id "ENST00000248996.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNAZ-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13804.1"; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000319073.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12755 chr22 HAVANA exon 23412540 23412756 . + . gene_id "ENSG00000128266.7"; transcript_id "ENST00000248996.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNAZ-001"; exon_number 1; exon_id "ENSE00001386134.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13804.1"; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000319073.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12756 chr22 HAVANA exon 23437434 23438605 . + . gene_id "ENSG00000128266.7"; transcript_id "ENST00000248996.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNAZ-001"; exon_number 2; exon_id "ENSE00000879410.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13804.1"; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000319073.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12757 chr22 HAVANA CDS 23437883 23438605 . + 0 gene_id "ENSG00000128266.7"; transcript_id "ENST00000248996.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNAZ-001"; exon_number 2; exon_id "ENSE00000879410.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13804.1"; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000319073.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12758 chr22 HAVANA start_codon 23437883 23437885 . + 0 gene_id "ENSG00000128266.7"; transcript_id "ENST00000248996.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNAZ-001"; exon_number 2; exon_id "ENSE00000879410.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13804.1"; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000319073.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12759 chr22 HAVANA exon 23465274 23467224 . + . gene_id "ENSG00000128266.7"; transcript_id "ENST00000248996.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNAZ-001"; exon_number 3; exon_id "ENSE00001045327.7"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13804.1"; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000319073.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12760 chr22 HAVANA CDS 23465274 23465615 . + 0 gene_id "ENSG00000128266.7"; transcript_id "ENST00000248996.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNAZ-001"; exon_number 3; exon_id "ENSE00001045327.7"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13804.1"; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000319073.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12761 chr22 HAVANA stop_codon 23465616 23465618 . + 0 gene_id "ENSG00000128266.7"; transcript_id "ENST00000248996.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNAZ-001"; exon_number 3; exon_id "ENSE00001045327.7"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13804.1"; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000319073.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12762 chr22 HAVANA UTR 23412540 23412756 . + . gene_id "ENSG00000128266.7"; transcript_id "ENST00000248996.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNAZ-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13804.1"; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000319073.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12763 chr22 HAVANA UTR 23437434 23437882 . + . gene_id "ENSG00000128266.7"; transcript_id "ENST00000248996.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNAZ-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13804.1"; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000319073.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12764 chr22 HAVANA UTR 23465616 23467224 . + . gene_id "ENSG00000128266.7"; transcript_id "ENST00000248996.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GNAZ-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13804.1"; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000319073.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12765 chr22 HAVANA transcript 23412760 23437903 . + . gene_id "ENSG00000128266.7"; transcript_id "ENST00000492538.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GNAZ-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000320285.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12766 chr22 HAVANA exon 23412760 23412941 . + . gene_id "ENSG00000128266.7"; transcript_id "ENST00000492538.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GNAZ-003"; exon_number 1; exon_id "ENSE00001910025.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000320285.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12767 chr22 HAVANA exon 23437434 23437903 . + . gene_id "ENSG00000128266.7"; transcript_id "ENST00000492538.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GNAZ-003"; exon_number 2; exon_id "ENSE00001901305.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000320285.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12768 chr22 HAVANA transcript 23464565 23465529 . + . gene_id "ENSG00000128266.7"; transcript_id "ENST00000479571.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GNAZ-002"; level 2; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000319076.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12769 chr22 HAVANA exon 23464565 23464889 . + . gene_id "ENSG00000128266.7"; transcript_id "ENST00000479571.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GNAZ-002"; exon_number 1; exon_id "ENSE00001921804.1"; level 2; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000319076.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12770 chr22 HAVANA exon 23465274 23465529 . + . gene_id "ENSG00000128266.7"; transcript_id "ENST00000479571.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GNAZ"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GNAZ-002"; exon_number 2; exon_id "ENSE00001830862.1"; level 2; havana_gene "OTTHUMG00000150611.3"; havana_transcript "OTTHUMT00000319076.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12771 chr22 ENSEMBL gene 23474919 23475192 . - . gene_id "ENSG00000272019.1"; transcript_id "ENSG00000272019.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Metazoa_SRP"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Metazoa_SRP"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12772 chr22 ENSEMBL transcript 23474919 23475192 . - . gene_id "ENSG00000272019.1"; transcript_id "ENST00000606537.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Metazoa_SRP"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Metazoa_SRP.34-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12773 chr22 ENSEMBL exon 23474919 23475192 . - . gene_id "ENSG00000272019.1"; transcript_id "ENST00000606537.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Metazoa_SRP"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Metazoa_SRP.34-201"; exon_number 1; exon_id "ENSE00003695698.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12774 chr22 ENSEMBL gene 23478807 23478897 . + . gene_id "ENSG00000221069.1"; transcript_id "ENSG00000221069.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AC000029.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AC000029.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12775 chr22 ENSEMBL transcript 23478807 23478897 . + . gene_id "ENSG00000221069.1"; transcript_id "ENST00000408142.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AC000029.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AC000029.1-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12776 chr22 ENSEMBL exon 23478807 23478897 . + . gene_id "ENSG00000221069.1"; transcript_id "ENST00000408142.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AC000029.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AC000029.1-201"; exon_number 1; exon_id "ENSE00001564777.1"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12777 chr22 HAVANA gene 23487513 23506537 . + . gene_id "ENSG00000100228.8"; transcript_id "ENSG00000100228.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36"; level 2; havana_gene "OTTHUMG00000150601.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12778 chr22 HAVANA transcript 23487513 23506537 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12779 chr22 HAVANA exon 23487513 23487738 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 1; exon_id "ENSE00000879414.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12780 chr22 HAVANA CDS 23487553 23487738 . + 0 gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 1; exon_id "ENSE00000879414.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12781 chr22 HAVANA start_codon 23487553 23487555 . + 0 gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 1; exon_id "ENSE00000879414.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12782 chr22 HAVANA exon 23488792 23488872 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 2; exon_id "ENSE00000651221.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12783 chr22 HAVANA CDS 23488792 23488872 . + 0 gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 2; exon_id "ENSE00000651221.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12784 chr22 HAVANA exon 23492250 23492341 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 3; exon_id "ENSE00000651223.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12785 chr22 HAVANA CDS 23492250 23492341 . + 0 gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 3; exon_id "ENSE00000651223.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12786 chr22 HAVANA exon 23494648 23494713 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 4; exon_id "ENSE00000651225.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12787 chr22 HAVANA CDS 23494648 23494713 . + 1 gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 4; exon_id "ENSE00000651225.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12788 chr22 HAVANA exon 23495220 23495321 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 5; exon_id "ENSE00000651226.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12789 chr22 HAVANA CDS 23495220 23495321 . + 1 gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 5; exon_id "ENSE00000651226.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12790 chr22 HAVANA exon 23498155 23498219 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 6; exon_id "ENSE00000651228.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12791 chr22 HAVANA CDS 23498155 23498219 . + 1 gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 6; exon_id "ENSE00000651228.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12792 chr22 HAVANA exon 23500179 23500230 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 7; exon_id "ENSE00000651231.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12793 chr22 HAVANA CDS 23500179 23500230 . + 2 gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 7; exon_id "ENSE00000651231.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12794 chr22 HAVANA exon 23501085 23501166 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 8; exon_id "ENSE00000651232.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12795 chr22 HAVANA CDS 23501085 23501166 . + 1 gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 8; exon_id "ENSE00000651232.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12796 chr22 HAVANA exon 23501350 23501440 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 9; exon_id "ENSE00000651234.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12797 chr22 HAVANA CDS 23501350 23501440 . + 0 gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 9; exon_id "ENSE00000651234.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12798 chr22 HAVANA exon 23503066 23503185 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 10; exon_id "ENSE00000651236.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12799 chr22 HAVANA CDS 23503066 23503185 . + 2 gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 10; exon_id "ENSE00000651236.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12800 chr22 HAVANA exon 23503687 23506537 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 11; exon_id "ENSE00001386696.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12801 chr22 HAVANA CDS 23503687 23503748 . + 2 gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 11; exon_id "ENSE00001386696.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12802 chr22 HAVANA stop_codon 23503749 23503751 . + 0 gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; exon_number 11; exon_id "ENSE00001386696.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12803 chr22 HAVANA UTR 23487513 23487552 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12804 chr22 HAVANA UTR 23503749 23506537 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000263116.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319046.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12805 chr22 HAVANA transcript 23487553 23503751 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12806 chr22 HAVANA exon 23487553 23487738 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 1; exon_id "ENSE00001867110.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12807 chr22 HAVANA CDS 23487553 23487738 . + 0 gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 1; exon_id "ENSE00001867110.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12808 chr22 HAVANA start_codon 23487553 23487555 . + 0 gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 1; exon_id "ENSE00001867110.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12809 chr22 HAVANA exon 23488792 23488872 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 2; exon_id "ENSE00000651221.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12810 chr22 HAVANA CDS 23488792 23488872 . + 0 gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 2; exon_id "ENSE00000651221.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12811 chr22 HAVANA exon 23492250 23492341 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 3; exon_id "ENSE00000651223.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12812 chr22 HAVANA CDS 23492250 23492341 . + 0 gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 3; exon_id "ENSE00000651223.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12813 chr22 HAVANA exon 23495220 23495321 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 4; exon_id "ENSE00000651226.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12814 chr22 HAVANA CDS 23495220 23495321 . + 1 gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 4; exon_id "ENSE00000651226.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12815 chr22 HAVANA exon 23498155 23498219 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 5; exon_id "ENSE00000651228.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12816 chr22 HAVANA CDS 23498155 23498219 . + 1 gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 5; exon_id "ENSE00000651228.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12817 chr22 HAVANA exon 23500179 23500230 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 6; exon_id "ENSE00000651231.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12818 chr22 HAVANA CDS 23500179 23500230 . + 2 gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 6; exon_id "ENSE00000651231.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12819 chr22 HAVANA exon 23501085 23501166 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 7; exon_id "ENSE00000651232.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12820 chr22 HAVANA CDS 23501085 23501166 . + 1 gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 7; exon_id "ENSE00000651232.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12821 chr22 HAVANA exon 23501350 23501440 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 8; exon_id "ENSE00000651234.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12822 chr22 HAVANA CDS 23501350 23501440 . + 0 gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 8; exon_id "ENSE00000651234.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12823 chr22 HAVANA exon 23503066 23503185 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 9; exon_id "ENSE00000651236.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12824 chr22 HAVANA CDS 23503066 23503185 . + 2 gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 9; exon_id "ENSE00000651236.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12825 chr22 HAVANA exon 23503687 23503751 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 10; exon_id "ENSE00001891222.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12826 chr22 HAVANA CDS 23503687 23503748 . + 2 gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 10; exon_id "ENSE00001891222.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12827 chr22 HAVANA stop_codon 23503749 23503751 . + 0 gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; exon_number 10; exon_id "ENSE00001891222.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12828 chr22 HAVANA UTR 23503749 23503751 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000341989.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RAB36-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13805.1"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319047.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12829 chr22 HAVANA transcript 23492300 23498498 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000420895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RAB36-003"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12830 chr22 HAVANA exon 23492300 23492341 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000420895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RAB36-003"; exon_number 1; exon_id "ENSE00001783318.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12831 chr22 HAVANA CDS 23492300 23492341 . + 1 gene_id "ENSG00000100228.8"; transcript_id "ENST00000420895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RAB36-003"; exon_number 1; exon_id "ENSE00001783318.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12832 chr22 HAVANA exon 23494648 23494713 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000420895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RAB36-003"; exon_number 2; exon_id "ENSE00000651225.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12833 chr22 HAVANA CDS 23494648 23494713 . + 1 gene_id "ENSG00000100228.8"; transcript_id "ENST00000420895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RAB36-003"; exon_number 2; exon_id "ENSE00000651225.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12834 chr22 HAVANA exon 23495220 23495321 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000420895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RAB36-003"; exon_number 3; exon_id "ENSE00000651226.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12835 chr22 HAVANA CDS 23495220 23495321 . + 1 gene_id "ENSG00000100228.8"; transcript_id "ENST00000420895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RAB36-003"; exon_number 3; exon_id "ENSE00000651226.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12836 chr22 HAVANA exon 23498155 23498498 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000420895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RAB36-003"; exon_number 4; exon_id "ENSE00001604325.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12837 chr22 HAVANA CDS 23498155 23498338 . + 1 gene_id "ENSG00000100228.8"; transcript_id "ENST00000420895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RAB36-003"; exon_number 4; exon_id "ENSE00001604325.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12838 chr22 HAVANA stop_codon 23498339 23498341 . + 0 gene_id "ENSG00000100228.8"; transcript_id "ENST00000420895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RAB36-003"; exon_number 4; exon_id "ENSE00001604325.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12839 chr22 HAVANA UTR 23498339 23498498 . + . gene_id "ENSG00000100228.8"; transcript_id "ENST00000420895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RAB36"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RAB36-003"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150601.1"; havana_transcript "OTTHUMT00000319048.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12840 chr22 HAVANA gene 23521891 23660224 . + . gene_id "ENSG00000186716.15"; transcript_id "ENSG00000186716.15"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR"; level 2; havana_gene "OTTHUMG00000150655.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12841 chr22 HAVANA transcript 23521891 23603615 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000479188.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-013"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12842 chr22 HAVANA exon 23521891 23522019 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000479188.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-013"; exon_number 1; exon_id "ENSE00001885565.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12843 chr22 HAVANA exon 23585005 23585172 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000479188.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-013"; exon_number 2; exon_id "ENSE00001888232.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12844 chr22 HAVANA exon 23595986 23596167 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000479188.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-013"; exon_number 3; exon_id "ENSE00003532721.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12845 chr22 HAVANA exon 23603137 23603241 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000479188.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-013"; exon_number 4; exon_id "ENSE00003663533.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12846 chr22 HAVANA exon 23603542 23603615 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000479188.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-013"; exon_number 5; exon_id "ENSE00001809323.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320294.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12847 chr22 HAVANA transcript 23522397 23660224 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12848 chr22 HAVANA exon 23522397 23524426 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 1; exon_id "ENSE00001897802.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12849 chr22 HAVANA CDS 23523148 23524426 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 1; exon_id "ENSE00001897802.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12850 chr22 HAVANA start_codon 23523148 23523150 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 1; exon_id "ENSE00001897802.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12851 chr22 HAVANA exon 23595986 23596167 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 2; exon_id "ENSE00003561884.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12852 chr22 HAVANA CDS 23595986 23596167 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 2; exon_id "ENSE00003561884.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12853 chr22 HAVANA exon 23603137 23603241 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 3; exon_id "ENSE00003517761.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12854 chr22 HAVANA CDS 23603137 23603241 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 3; exon_id "ENSE00003517761.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12855 chr22 HAVANA exon 23603542 23603727 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 4; exon_id "ENSE00001658624.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12856 chr22 HAVANA CDS 23603542 23603727 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 4; exon_id "ENSE00001658624.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12857 chr22 HAVANA exon 23610595 23610702 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 5; exon_id "ENSE00001154392.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12858 chr22 HAVANA CDS 23610595 23610702 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 5; exon_id "ENSE00001154392.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12859 chr22 HAVANA exon 23613719 23613779 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 6; exon_id "ENSE00001801315.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12860 chr22 HAVANA CDS 23613719 23613779 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 6; exon_id "ENSE00001801315.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12861 chr22 HAVANA exon 23615268 23615320 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 7; exon_id "ENSE00001689593.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12862 chr22 HAVANA CDS 23615268 23615320 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 7; exon_id "ENSE00001689593.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12863 chr22 HAVANA exon 23615821 23615961 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 8; exon_id "ENSE00001755753.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12864 chr22 HAVANA CDS 23615821 23615961 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 8; exon_id "ENSE00001755753.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12865 chr22 HAVANA exon 23626164 23626285 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 9; exon_id "ENSE00001616269.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12866 chr22 HAVANA CDS 23626164 23626285 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 9; exon_id "ENSE00001616269.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12867 chr22 HAVANA exon 23627220 23627388 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 10; exon_id "ENSE00003495342.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12868 chr22 HAVANA CDS 23627220 23627388 . + 1 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 10; exon_id "ENSE00003495342.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12869 chr22 HAVANA exon 23629346 23629465 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 11; exon_id "ENSE00003484066.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12870 chr22 HAVANA CDS 23629346 23629465 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 11; exon_id "ENSE00003484066.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12871 chr22 HAVANA exon 23630284 23630359 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 12; exon_id "ENSE00003610811.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12872 chr22 HAVANA CDS 23630284 23630359 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 12; exon_id "ENSE00003610811.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12873 chr22 HAVANA exon 23631704 23631808 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 13; exon_id "ENSE00001654687.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12874 chr22 HAVANA CDS 23631704 23631808 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 13; exon_id "ENSE00001654687.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12875 chr22 HAVANA exon 23632526 23632600 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 14; exon_id "ENSE00001781765.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12876 chr22 HAVANA CDS 23632526 23632600 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 14; exon_id "ENSE00001781765.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12877 chr22 HAVANA exon 23634728 23634825 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 15; exon_id "ENSE00003524316.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12878 chr22 HAVANA CDS 23634728 23634825 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 15; exon_id "ENSE00003524316.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12879 chr22 HAVANA exon 23637211 23637342 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 16; exon_id "ENSE00003496602.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12880 chr22 HAVANA CDS 23637211 23637342 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 16; exon_id "ENSE00003496602.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12881 chr22 HAVANA exon 23651611 23651670 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 17; exon_id "ENSE00003648666.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12882 chr22 HAVANA CDS 23651611 23651670 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 17; exon_id "ENSE00003648666.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12883 chr22 HAVANA exon 23652511 23652620 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 18; exon_id "ENSE00003599139.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12884 chr22 HAVANA CDS 23652511 23652620 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 18; exon_id "ENSE00003599139.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12885 chr22 HAVANA exon 23653884 23654023 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 19; exon_id "ENSE00003540236.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12886 chr22 HAVANA CDS 23653884 23654023 . + 1 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 19; exon_id "ENSE00003540236.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12887 chr22 HAVANA exon 23655074 23655208 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 20; exon_id "ENSE00003562142.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12888 chr22 HAVANA CDS 23655074 23655208 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 20; exon_id "ENSE00003562142.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12889 chr22 HAVANA exon 23656155 23656260 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 21; exon_id "ENSE00003668832.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12890 chr22 HAVANA CDS 23656155 23656260 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 21; exon_id "ENSE00003668832.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12891 chr22 HAVANA exon 23656739 23656901 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 22; exon_id "ENSE00003500461.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12892 chr22 HAVANA CDS 23656739 23656901 . + 1 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 22; exon_id "ENSE00003500461.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12893 chr22 HAVANA exon 23657620 23660224 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 23; exon_id "ENSE00001753733.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12894 chr22 HAVANA CDS 23657620 23657706 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 23; exon_id "ENSE00001753733.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12895 chr22 HAVANA stop_codon 23657707 23657709 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; exon_number 23; exon_id "ENSE00001753733.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12896 chr22 HAVANA UTR 23522397 23523147 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12897 chr22 HAVANA UTR 23657707 23660224 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000305877.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13806.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000075819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12898 chr22 HAVANA transcript 23522552 23658137 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12899 chr22 HAVANA exon 23522552 23524426 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 1; exon_id "ENSE00001380753.3"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12900 chr22 HAVANA CDS 23523148 23524426 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 1; exon_id "ENSE00001380753.3"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12901 chr22 HAVANA start_codon 23523148 23523150 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 1; exon_id "ENSE00001380753.3"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12902 chr22 HAVANA exon 23595986 23596167 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 2; exon_id "ENSE00003561884.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12903 chr22 HAVANA CDS 23595986 23596167 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 2; exon_id "ENSE00003561884.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12904 chr22 HAVANA exon 23603137 23603241 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 3; exon_id "ENSE00003517761.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12905 chr22 HAVANA CDS 23603137 23603241 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 3; exon_id "ENSE00003517761.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12906 chr22 HAVANA exon 23603542 23603727 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 4; exon_id "ENSE00001658624.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12907 chr22 HAVANA CDS 23603542 23603727 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 4; exon_id "ENSE00001658624.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12908 chr22 HAVANA exon 23610595 23610702 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 5; exon_id "ENSE00001154392.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12909 chr22 HAVANA CDS 23610595 23610702 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 5; exon_id "ENSE00001154392.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12910 chr22 HAVANA exon 23613719 23613779 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 6; exon_id "ENSE00001801315.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12911 chr22 HAVANA CDS 23613719 23613779 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 6; exon_id "ENSE00001801315.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12912 chr22 HAVANA exon 23615268 23615320 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 7; exon_id "ENSE00001689593.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12913 chr22 HAVANA CDS 23615268 23615320 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 7; exon_id "ENSE00001689593.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12914 chr22 HAVANA exon 23615821 23615961 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 8; exon_id "ENSE00001755753.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12915 chr22 HAVANA CDS 23615821 23615961 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 8; exon_id "ENSE00001755753.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12916 chr22 HAVANA exon 23626164 23626285 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 9; exon_id "ENSE00001616269.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12917 chr22 HAVANA CDS 23626164 23626285 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 9; exon_id "ENSE00001616269.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12918 chr22 HAVANA exon 23627220 23627388 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 10; exon_id "ENSE00003495342.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12919 chr22 HAVANA CDS 23627220 23627388 . + 1 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 10; exon_id "ENSE00003495342.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12920 chr22 HAVANA exon 23629346 23629465 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 11; exon_id "ENSE00003484066.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12921 chr22 HAVANA CDS 23629346 23629465 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 11; exon_id "ENSE00003484066.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12922 chr22 HAVANA exon 23630284 23630359 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 12; exon_id "ENSE00003610811.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12923 chr22 HAVANA CDS 23630284 23630359 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 12; exon_id "ENSE00003610811.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12924 chr22 HAVANA exon 23631704 23631808 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 13; exon_id "ENSE00001654687.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12925 chr22 HAVANA CDS 23631704 23631808 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 13; exon_id "ENSE00001654687.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12926 chr22 HAVANA exon 23632526 23632600 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 14; exon_id "ENSE00001781765.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12927 chr22 HAVANA CDS 23632526 23632600 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 14; exon_id "ENSE00001781765.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12928 chr22 HAVANA exon 23634728 23634825 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 15; exon_id "ENSE00003524316.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12929 chr22 HAVANA CDS 23634728 23634825 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 15; exon_id "ENSE00003524316.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12930 chr22 HAVANA exon 23651611 23651670 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 16; exon_id "ENSE00003648666.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12931 chr22 HAVANA CDS 23651611 23651670 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 16; exon_id "ENSE00003648666.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12932 chr22 HAVANA exon 23652511 23652620 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 17; exon_id "ENSE00003599139.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12933 chr22 HAVANA CDS 23652511 23652620 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 17; exon_id "ENSE00003599139.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12934 chr22 HAVANA exon 23653884 23654023 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 18; exon_id "ENSE00003540236.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12935 chr22 HAVANA CDS 23653884 23654023 . + 1 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 18; exon_id "ENSE00003540236.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12936 chr22 HAVANA exon 23655074 23655208 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 19; exon_id "ENSE00003562142.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12937 chr22 HAVANA CDS 23655074 23655208 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 19; exon_id "ENSE00003562142.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12938 chr22 HAVANA exon 23656155 23656260 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 20; exon_id "ENSE00003668832.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12939 chr22 HAVANA CDS 23656155 23656260 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 20; exon_id "ENSE00003668832.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12940 chr22 HAVANA exon 23656739 23656901 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 21; exon_id "ENSE00003500461.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12941 chr22 HAVANA CDS 23656739 23656901 . + 1 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 21; exon_id "ENSE00003500461.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12942 chr22 HAVANA exon 23657620 23658137 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 22; exon_id "ENSE00002130588.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12943 chr22 HAVANA CDS 23657620 23657706 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 22; exon_id "ENSE00002130588.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12944 chr22 HAVANA stop_codon 23657707 23657709 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; exon_number 22; exon_id "ENSE00002130588.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12945 chr22 HAVANA UTR 23522552 23523147 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12946 chr22 HAVANA UTR 23657707 23658137 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000359540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13807.1"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000140135.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12947 chr22 ENSEMBL transcript 23522552 23585129 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000398512.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150655.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12948 chr22 ENSEMBL exon 23522552 23524426 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000398512.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-201"; exon_number 1; exon_id "ENSE00001380753.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000150655.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12949 chr22 ENSEMBL CDS 23523148 23524426 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000398512.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-201"; exon_number 1; exon_id "ENSE00001380753.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000150655.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12950 chr22 ENSEMBL start_codon 23523148 23523150 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000398512.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-201"; exon_number 1; exon_id "ENSE00001380753.3"; level 3; tag "basic"; havana_gene "OTTHUMG00000150655.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12951 chr22 ENSEMBL exon 23585005 23585129 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000398512.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-201"; exon_number 2; exon_id "ENSE00002222896.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150655.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12952 chr22 ENSEMBL CDS 23585005 23585126 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000398512.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-201"; exon_number 2; exon_id "ENSE00002222896.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150655.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12953 chr22 ENSEMBL stop_codon 23585127 23585129 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000398512.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-201"; exon_number 2; exon_id "ENSE00002222896.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150655.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12954 chr22 ENSEMBL UTR 23522552 23523147 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000398512.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150655.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12955 chr22 ENSEMBL UTR 23585127 23585129 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000398512.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BCR-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150655.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12956 chr22 HAVANA transcript 23540440 23596020 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000463770.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-004"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000319088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12957 chr22 HAVANA exon 23540440 23540572 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000463770.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-004"; exon_number 1; exon_id "ENSE00001895428.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000319088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12958 chr22 HAVANA exon 23595986 23596020 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000463770.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-004"; exon_number 2; exon_id "ENSE00001870081.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000319088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12959 chr22 HAVANA transcript 23540519 23596020 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000487679.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-003"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000319087.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12960 chr22 HAVANA exon 23540519 23540572 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000487679.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-003"; exon_number 1; exon_id "ENSE00001835862.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000319087.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12961 chr22 HAVANA exon 23541398 23541539 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000487679.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-003"; exon_number 2; exon_id "ENSE00001913969.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000319087.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12962 chr22 HAVANA exon 23595986 23596020 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000487679.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-003"; exon_number 3; exon_id "ENSE00001870081.1"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000319087.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12963 chr22 HAVANA transcript 23593219 23603580 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000480973.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-014"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12964 chr22 HAVANA exon 23593219 23593427 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000480973.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-014"; exon_number 1; exon_id "ENSE00001906681.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12965 chr22 HAVANA exon 23595986 23596167 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000480973.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-014"; exon_number 2; exon_id "ENSE00003532721.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12966 chr22 HAVANA exon 23603137 23603241 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000480973.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-014"; exon_number 3; exon_id "ENSE00003663533.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12967 chr22 HAVANA exon 23603542 23603580 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000480973.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-014"; exon_number 4; exon_id "ENSE00001811951.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320295.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12968 chr22 HAVANA transcript 23596147 23627301 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12969 chr22 HAVANA exon 23596147 23596167 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 1; exon_id "ENSE00001622234.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12970 chr22 HAVANA CDS 23596147 23596167 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 1; exon_id "ENSE00001622234.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12971 chr22 HAVANA exon 23603137 23603241 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 2; exon_id "ENSE00003517761.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12972 chr22 HAVANA CDS 23603137 23603241 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 2; exon_id "ENSE00003517761.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12973 chr22 HAVANA exon 23603542 23603727 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 3; exon_id "ENSE00001658624.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12974 chr22 HAVANA CDS 23603542 23603727 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 3; exon_id "ENSE00001658624.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12975 chr22 HAVANA exon 23613719 23613779 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 4; exon_id "ENSE00001801315.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12976 chr22 HAVANA CDS 23613719 23613779 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 4; exon_id "ENSE00001801315.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12977 chr22 HAVANA exon 23615268 23615320 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 5; exon_id "ENSE00001689593.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12978 chr22 HAVANA CDS 23615268 23615320 . + 2 gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 5; exon_id "ENSE00001689593.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12979 chr22 HAVANA exon 23615821 23615961 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 6; exon_id "ENSE00001755753.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12980 chr22 HAVANA CDS 23615821 23615961 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 6; exon_id "ENSE00001755753.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12981 chr22 HAVANA exon 23626164 23626285 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 7; exon_id "ENSE00001616269.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12982 chr22 HAVANA CDS 23626164 23626285 . + 0 gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 7; exon_id "ENSE00001616269.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12983 chr22 HAVANA exon 23627220 23627301 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 8; exon_id "ENSE00001759065.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12984 chr22 HAVANA CDS 23627220 23627301 . + 1 gene_id "ENSG00000186716.15"; transcript_id "ENST00000427791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BCR-006"; exon_number 8; exon_id "ENSE00001759065.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320287.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12985 chr22 HAVANA transcript 23625396 23633318 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000487968.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BCR-012"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320293.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12986 chr22 HAVANA exon 23625396 23626285 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000487968.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BCR-012"; exon_number 1; exon_id "ENSE00001946900.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320293.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12987 chr22 HAVANA exon 23627220 23627388 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000487968.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BCR-012"; exon_number 2; exon_id "ENSE00003616233.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320293.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12988 chr22 HAVANA exon 23629346 23629465 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000487968.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BCR-012"; exon_number 3; exon_id "ENSE00003604191.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320293.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12989 chr22 HAVANA exon 23630284 23630359 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000487968.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BCR-012"; exon_number 4; exon_id "ENSE00003595896.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320293.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12990 chr22 HAVANA exon 23631704 23633318 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000487968.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BCR-012"; exon_number 5; exon_id "ENSE00001904438.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320293.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12991 chr22 HAVANA transcript 23625975 23629360 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000466076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BCR-015"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320296.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12992 chr22 HAVANA exon 23625975 23626285 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000466076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BCR-015"; exon_number 1; exon_id "ENSE00001949240.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320296.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12993 chr22 HAVANA exon 23627220 23627388 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000466076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BCR-015"; exon_number 2; exon_id "ENSE00003616233.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320296.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12994 chr22 HAVANA exon 23629346 23629360 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000466076.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BCR-015"; exon_number 3; exon_id "ENSE00001894140.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320296.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12995 chr22 HAVANA transcript 23631802 23652620 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000419722.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-016"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12996 chr22 HAVANA exon 23631802 23631808 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000419722.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-016"; exon_number 1; exon_id "ENSE00001809529.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12997 chr22 HAVANA exon 23634728 23634825 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000419722.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-016"; exon_number 2; exon_id "ENSE00003624154.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12998 chr22 HAVANA exon 23637211 23637342 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000419722.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-016"; exon_number 3; exon_id "ENSE00003590749.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
12999 chr22 HAVANA exon 23651611 23651670 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000419722.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-016"; exon_number 4; exon_id "ENSE00003679653.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13000 chr22 HAVANA exon 23652130 23652620 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000419722.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-016"; exon_number 5; exon_id "ENSE00001724461.2"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320297.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13001 chr22 HAVANA transcript 23637228 23645050 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000471452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-017"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13002 chr22 HAVANA exon 23637228 23637342 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000471452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-017"; exon_number 1; exon_id "ENSE00001847826.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13003 chr22 HAVANA exon 23644528 23645050 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000471452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-017"; exon_number 2; exon_id "ENSE00001816801.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320298.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13004 chr22 HAVANA transcript 23648341 23652620 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000478978.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-018"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320299.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13005 chr22 HAVANA exon 23648341 23648436 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000478978.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-018"; exon_number 1; exon_id "ENSE00001826929.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320299.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13006 chr22 HAVANA exon 23649755 23649951 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000478978.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-018"; exon_number 2; exon_id "ENSE00001909580.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320299.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13007 chr22 HAVANA exon 23651611 23651670 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000478978.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-018"; exon_number 3; exon_id "ENSE00003679653.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320299.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13008 chr22 HAVANA exon 23652511 23652620 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000478978.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-018"; exon_number 4; exon_id "ENSE00003683299.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320299.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13009 chr22 HAVANA transcript 23648932 23656186 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000475025.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-019"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320300.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13010 chr22 HAVANA exon 23648932 23649017 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000475025.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-019"; exon_number 1; exon_id "ENSE00001893883.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320300.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13011 chr22 HAVANA exon 23651611 23651670 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000475025.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-019"; exon_number 2; exon_id "ENSE00003679653.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320300.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13012 chr22 HAVANA exon 23652511 23652620 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000475025.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-019"; exon_number 3; exon_id "ENSE00003683299.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320300.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13013 chr22 HAVANA exon 23653884 23654023 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000475025.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-019"; exon_number 4; exon_id "ENSE00003491322.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320300.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13014 chr22 HAVANA exon 23655074 23655208 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000475025.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-019"; exon_number 5; exon_id "ENSE00003640961.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320300.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13015 chr22 HAVANA exon 23656155 23656186 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000475025.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-019"; exon_number 6; exon_id "ENSE00001937182.1"; level 2; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320300.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13016 chr22 HAVANA transcript 23651661 23660221 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000436990.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000319248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13017 chr22 HAVANA exon 23651661 23652620 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000436990.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-005"; exon_number 1; exon_id "ENSE00001841470.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000319248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13018 chr22 HAVANA exon 23653884 23654105 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000436990.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-005"; exon_number 2; exon_id "ENSE00001765089.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000319248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13019 chr22 HAVANA exon 23655074 23655208 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000436990.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-005"; exon_number 3; exon_id "ENSE00003640961.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000319248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13020 chr22 HAVANA exon 23656155 23656260 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000436990.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-005"; exon_number 4; exon_id "ENSE00003629852.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000319248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13021 chr22 HAVANA exon 23656739 23656901 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000436990.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-005"; exon_number 5; exon_id "ENSE00003624608.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000319248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13022 chr22 HAVANA exon 23657620 23660221 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000436990.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-005"; exon_number 6; exon_id "ENSE00001955796.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000319248.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13023 chr22 HAVANA transcript 23654575 23656882 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000458056.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-020"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320301.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13024 chr22 HAVANA exon 23654575 23655208 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000458056.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-020"; exon_number 1; exon_id "ENSE00001911552.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320301.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13025 chr22 HAVANA exon 23656739 23656882 . + . gene_id "ENSG00000186716.15"; transcript_id "ENST00000458056.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BCR"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BCR-020"; exon_number 2; exon_id "ENSE00001886337.1"; level 2; tag "not_best_in_genome_evidence"; havana_gene "OTTHUMG00000150655.3"; havana_transcript "OTTHUMT00000320301.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13026 chr22 HAVANA gene 23522058 23522465 . - . gene_id "ENSG00000236794.4"; transcript_id "ENSG00000236794.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP8"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP8"; level 2; havana_gene "OTTHUMG00000155712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13027 chr22 ENSEMBL transcript 23522058 23522465 . - . gene_id "ENSG00000236794.4"; transcript_id "ENST00000593306.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP8"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP8-201"; level 3; havana_gene "OTTHUMG00000155712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13028 chr22 ENSEMBL exon 23522424 23522465 . - . gene_id "ENSG00000236794.4"; transcript_id "ENST00000593306.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP8"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP8-201"; exon_number 1; exon_id "ENSE00003092071.1"; level 3; havana_gene "OTTHUMG00000155712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13029 chr22 ENSEMBL exon 23522259 23522368 . - . gene_id "ENSG00000236794.4"; transcript_id "ENST00000593306.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP8"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP8-201"; exon_number 2; exon_id "ENSE00003066707.1"; level 3; havana_gene "OTTHUMG00000155712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13030 chr22 ENSEMBL exon 23522058 23522244 . - . gene_id "ENSG00000236794.4"; transcript_id "ENST00000593306.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP8"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP8-201"; exon_number 3; exon_id "ENSE00003048042.1"; level 3; havana_gene "OTTHUMG00000155712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13031 chr22 HAVANA transcript 23522105 23522359 . - . gene_id "ENSG00000236794.4"; transcript_id "ENST00000412037.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP8"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP8-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000155712.2"; havana_transcript "OTTHUMT00000341344.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13032 chr22 HAVANA exon 23522105 23522359 . - . gene_id "ENSG00000236794.4"; transcript_id "ENST00000412037.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP8"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP8-001"; exon_number 1; exon_id "ENSE00001762917.2"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000155712.2"; havana_transcript "OTTHUMT00000341344.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13033 chr22 ENSEMBL gene 23603971 23604258 . - . gene_id "ENSG00000240160.2"; transcript_id "ENSG00000240160.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL263P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL263P"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13034 chr22 ENSEMBL transcript 23603971 23604258 . - . gene_id "ENSG00000240160.2"; transcript_id "ENST00000467969.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL263P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL263P-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13035 chr22 ENSEMBL exon 23603971 23604258 . - . gene_id "ENSG00000240160.2"; transcript_id "ENST00000467969.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL263P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL263P-201"; exon_number 1; exon_id "ENSE00001875334.2"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13036 chr22 HAVANA gene 23605323 23606541 . + . gene_id "ENSG00000230701.1"; transcript_id "ENSG00000230701.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "FBXW4P1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "FBXW4P1"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000030931.8";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13037 chr22 HAVANA transcript 23605323 23606541 . + . gene_id "ENSG00000230701.1"; transcript_id "ENST00000426721.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "FBXW4P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "FBXW4P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030931.8"; havana_transcript "OTTHUMT00000319421.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13038 chr22 HAVANA exon 23605323 23606541 . + . gene_id "ENSG00000230701.1"; transcript_id "ENST00000426721.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "FBXW4P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "FBXW4P1-001"; exon_number 1; exon_id "ENSE00001782951.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000030931.8"; havana_transcript "OTTHUMT00000319421.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13039 chr22 HAVANA gene 23664730 23665114 . - . gene_id "ENSG00000214526.3"; transcript_id "ENSG00000214526.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000343.1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000343.1"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150656.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13040 chr22 HAVANA transcript 23664730 23665114 . - . gene_id "ENSG00000214526.3"; transcript_id "ENST00000440602.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000343.1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000343.1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150656.1"; havana_transcript "OTTHUMT00000319423.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13041 chr22 HAVANA exon 23664730 23665114 . - . gene_id "ENSG00000214526.3"; transcript_id "ENST00000440602.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000343.1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000343.1-001"; exon_number 1; exon_id "ENSE00001526946.2"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150656.1"; havana_transcript "OTTHUMT00000319423.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13042 chr22 HAVANA gene 23668803 23670680 . + . gene_id "ENSG00000236611.1"; transcript_id "ENSG00000236611.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000343.2"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AP000343.2"; level 1; havana_gene "OTTHUMG00000150838.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13043 chr22 HAVANA transcript 23668803 23670680 . + . gene_id "ENSG00000236611.1"; transcript_id "ENST00000450776.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000343.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000343.2-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150838.1"; havana_transcript "OTTHUMT00000320286.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13044 chr22 HAVANA exon 23668803 23668978 . + . gene_id "ENSG00000236611.1"; transcript_id "ENST00000450776.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000343.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000343.2-001"; exon_number 1; exon_id "ENSE00001785308.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150838.1"; havana_transcript "OTTHUMT00000320286.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13045 chr22 HAVANA exon 23670511 23670680 . + . gene_id "ENSG00000236611.1"; transcript_id "ENST00000450776.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000343.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000343.2-001"; exon_number 2; exon_id "ENSE00001710203.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150838.1"; havana_transcript "OTTHUMT00000320286.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13046 chr22 HAVANA gene 23701790 23729918 . - . gene_id "ENSG00000215478.4"; transcript_id "ENSG00000215478.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1"; level 2; havana_gene "OTTHUMG00000150651.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13047 chr22 HAVANA transcript 23701790 23719201 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000400418.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319402.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13048 chr22 HAVANA exon 23719068 23719201 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000400418.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-001"; exon_number 1; exon_id "ENSE00003522724.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319402.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13049 chr22 HAVANA exon 23715782 23715935 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000400418.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-001"; exon_number 2; exon_id "ENSE00003462991.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319402.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13050 chr22 HAVANA exon 23712545 23712649 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000400418.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-001"; exon_number 3; exon_id "ENSE00003693392.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319402.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13051 chr22 HAVANA exon 23710967 23711071 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000400418.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-001"; exon_number 4; exon_id "ENSE00003557968.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319402.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13052 chr22 HAVANA exon 23708465 23708605 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000400418.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-001"; exon_number 5; exon_id "ENSE00003631209.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319402.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13053 chr22 HAVANA exon 23705291 23705359 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000400418.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-001"; exon_number 6; exon_id "ENSE00003603900.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319402.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13054 chr22 HAVANA exon 23701790 23701940 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000400418.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-001"; exon_number 7; exon_id "ENSE00001542795.2"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319402.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13055 chr22 ENSEMBL transcript 23701797 23724313 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000542510.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-201"; level 3; havana_gene "OTTHUMG00000150651.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13056 chr22 ENSEMBL exon 23724150 23724313 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000542510.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-201"; exon_number 1; exon_id "ENSE00002229710.1"; level 3; havana_gene "OTTHUMG00000150651.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13057 chr22 ENSEMBL exon 23719068 23719201 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000542510.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-201"; exon_number 2; exon_id "ENSE00003489770.1"; level 3; havana_gene "OTTHUMG00000150651.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13058 chr22 ENSEMBL exon 23715782 23715935 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000542510.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-201"; exon_number 3; exon_id "ENSE00003499498.1"; level 3; havana_gene "OTTHUMG00000150651.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13059 chr22 ENSEMBL exon 23712545 23712649 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000542510.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-201"; exon_number 4; exon_id "ENSE00003619299.1"; level 3; havana_gene "OTTHUMG00000150651.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13060 chr22 ENSEMBL exon 23710967 23711071 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000542510.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-201"; exon_number 5; exon_id "ENSE00003525078.1"; level 3; havana_gene "OTTHUMG00000150651.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13061 chr22 ENSEMBL exon 23708465 23708605 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000542510.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-201"; exon_number 6; exon_id "ENSE00003562770.1"; level 3; havana_gene "OTTHUMG00000150651.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13062 chr22 ENSEMBL exon 23705291 23705359 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000542510.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-201"; exon_number 7; exon_id "ENSE00003557886.1"; level 3; havana_gene "OTTHUMG00000150651.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13063 chr22 ENSEMBL exon 23701797 23701940 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000542510.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CES5AP1-201"; exon_number 8; exon_id "ENSE00002318122.1"; level 3; havana_gene "OTTHUMG00000150651.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13064 chr22 HAVANA transcript 23708489 23719083 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000422151.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-006"; level 2; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319406.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13065 chr22 HAVANA exon 23719068 23719083 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000422151.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-006"; exon_number 1; exon_id "ENSE00001629545.1"; level 2; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319406.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13066 chr22 HAVANA exon 23715817 23715935 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000422151.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-006"; exon_number 2; exon_id "ENSE00001749477.1"; level 2; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319406.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13067 chr22 HAVANA exon 23712545 23712649 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000422151.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-006"; exon_number 3; exon_id "ENSE00003693392.1"; level 2; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319406.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13068 chr22 HAVANA exon 23708489 23708605 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000422151.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-006"; exon_number 4; exon_id "ENSE00001667989.1"; level 2; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319406.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13069 chr22 HAVANA transcript 23712282 23722939 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000431237.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-004"; level 2; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319404.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13070 chr22 HAVANA exon 23722912 23722939 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000431237.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-004"; exon_number 1; exon_id "ENSE00001656824.1"; level 2; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319404.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13071 chr22 HAVANA exon 23719068 23719201 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000431237.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-004"; exon_number 2; exon_id "ENSE00003522724.1"; level 2; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319404.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13072 chr22 HAVANA exon 23715817 23715935 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000431237.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-004"; exon_number 3; exon_id "ENSE00001749477.1"; level 2; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319404.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13073 chr22 HAVANA exon 23712282 23712649 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000431237.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-004"; exon_number 4; exon_id "ENSE00001648213.1"; level 2; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319404.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13074 chr22 HAVANA transcript 23712282 23729918 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000415114.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13075 chr22 HAVANA exon 23729883 23729918 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000415114.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-002"; exon_number 1; exon_id "ENSE00001673775.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13076 chr22 HAVANA exon 23724150 23724466 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000415114.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-002"; exon_number 2; exon_id "ENSE00001562152.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13077 chr22 HAVANA exon 23719068 23719201 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000415114.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-002"; exon_number 3; exon_id "ENSE00003522724.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13078 chr22 HAVANA exon 23715817 23715935 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000415114.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-002"; exon_number 4; exon_id "ENSE00001749477.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13079 chr22 HAVANA exon 23712282 23712649 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000415114.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-002"; exon_number 5; exon_id "ENSE00001648213.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319403.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13080 chr22 HAVANA transcript 23715835 23719258 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000424029.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-005"; level 2; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13081 chr22 HAVANA exon 23719068 23719258 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000424029.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-005"; exon_number 1; exon_id "ENSE00001613340.1"; level 2; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13082 chr22 HAVANA exon 23715835 23715935 . - . gene_id "ENSG00000215478.4"; transcript_id "ENST00000424029.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CES5AP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CES5AP1-005"; exon_number 2; exon_id "ENSE00001683733.1"; level 2; havana_gene "OTTHUMG00000150651.3"; havana_transcript "OTTHUMT00000319405.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13083 chr22 HAVANA gene 23732793 23744913 . - . gene_id "ENSG00000133519.8"; transcript_id "ENSG00000133519.8"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1"; level 2; havana_gene "OTTHUMG00000150650.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13084 chr22 HAVANA transcript 23732793 23744754 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000255890.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319397.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13085 chr22 HAVANA exon 23744548 23744754 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000255890.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-001"; exon_number 1; exon_id "ENSE00001754779.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319397.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13086 chr22 HAVANA exon 23744224 23744342 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000255890.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-001"; exon_number 2; exon_id "ENSE00001700441.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319397.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13087 chr22 HAVANA exon 23744028 23744140 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000255890.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-001"; exon_number 3; exon_id "ENSE00002122217.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319397.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13088 chr22 HAVANA exon 23741947 23742770 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000255890.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-001"; exon_number 4; exon_id "ENSE00002112938.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319397.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13089 chr22 HAVANA exon 23732793 23733911 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000255890.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-001"; exon_number 5; exon_id "ENSE00001671533.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319397.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13090 chr22 HAVANA transcript 23732793 23744913 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000433168.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-002"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13091 chr22 HAVANA exon 23744548 23744913 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000433168.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-002"; exon_number 1; exon_id "ENSE00001645539.1"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13092 chr22 HAVANA exon 23741947 23742770 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000433168.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-002"; exon_number 2; exon_id "ENSE00002112938.1"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13093 chr22 HAVANA exon 23732793 23733911 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000433168.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-002"; exon_number 3; exon_id "ENSE00001671533.1"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319398.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13094 chr22 HAVANA transcript 23733564 23744759 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000420968.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-003"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13095 chr22 HAVANA exon 23744548 23744759 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000420968.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-003"; exon_number 1; exon_id "ENSE00002103317.1"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13096 chr22 HAVANA exon 23744028 23744140 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000420968.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-003"; exon_number 2; exon_id "ENSE00002122217.1"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13097 chr22 HAVANA exon 23741947 23742770 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000420968.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-003"; exon_number 3; exon_id "ENSE00002112938.1"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13098 chr22 HAVANA exon 23736113 23736244 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000420968.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-003"; exon_number 4; exon_id "ENSE00002096787.1"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13099 chr22 HAVANA exon 23734914 23735020 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000420968.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-003"; exon_number 5; exon_id "ENSE00002115711.1"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13100 chr22 HAVANA exon 23733564 23733911 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000420968.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-003"; exon_number 6; exon_id "ENSE00002104792.1"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319399.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13101 chr22 HAVANA transcript 23734772 23741795 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000456279.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-005"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13102 chr22 HAVANA exon 23741771 23741795 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000456279.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-005"; exon_number 1; exon_id "ENSE00001634724.1"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13103 chr22 HAVANA exon 23740265 23740293 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000456279.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-005"; exon_number 2; exon_id "ENSE00001799525.1"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13104 chr22 HAVANA exon 23736113 23736244 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000456279.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-005"; exon_number 3; exon_id "ENSE00002096787.1"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13105 chr22 HAVANA exon 23734772 23735020 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000456279.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-005"; exon_number 4; exon_id "ENSE00001668213.1"; level 2; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319401.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13106 chr22 HAVANA transcript 23740125 23744344 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000418264.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-004"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319400.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13107 chr22 HAVANA exon 23744224 23744344 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000418264.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-004"; exon_number 1; exon_id "ENSE00001756128.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319400.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13108 chr22 HAVANA exon 23744028 23744140 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000418264.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-004"; exon_number 2; exon_id "ENSE00002122217.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319400.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13109 chr22 HAVANA exon 23741771 23742770 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000418264.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-004"; exon_number 3; exon_id "ENSE00001637941.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319400.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13110 chr22 HAVANA exon 23740125 23740293 . - . gene_id "ENSG00000133519.8"; transcript_id "ENST00000418264.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZDHHC8P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ZDHHC8P1-004"; exon_number 4; exon_id "ENSE00001692817.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150650.1"; havana_transcript "OTTHUMT00000319400.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13111 chr22 HAVANA gene 23734958 23736026 . + . gene_id "ENSG00000248409.1"; transcript_id "ENSG00000248409.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1269D1.8"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1269D1.8"; level 2; havana_gene "OTTHUMG00000155750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13112 chr22 HAVANA transcript 23734958 23736026 . + . gene_id "ENSG00000248409.1"; transcript_id "ENST00000512987.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1269D1.8"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1269D1.8-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000155750.1"; havana_transcript "OTTHUMT00000341494.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13113 chr22 HAVANA exon 23734958 23735260 . + . gene_id "ENSG00000248409.1"; transcript_id "ENST00000512987.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1269D1.8"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1269D1.8-001"; exon_number 1; exon_id "ENSE00002065993.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000155750.1"; havana_transcript "OTTHUMT00000341494.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13114 chr22 HAVANA exon 23735361 23735468 . + . gene_id "ENSG00000248409.1"; transcript_id "ENST00000512987.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1269D1.8"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1269D1.8-001"; exon_number 2; exon_id "ENSE00002032882.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000155750.1"; havana_transcript "OTTHUMT00000341494.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13115 chr22 HAVANA exon 23735555 23735653 . + . gene_id "ENSG00000248409.1"; transcript_id "ENST00000512987.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1269D1.8"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1269D1.8-001"; exon_number 3; exon_id "ENSE00002021532.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000155750.1"; havana_transcript "OTTHUMT00000341494.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13116 chr22 HAVANA exon 23735825 23735882 . + . gene_id "ENSG00000248409.1"; transcript_id "ENST00000512987.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1269D1.8"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1269D1.8-001"; exon_number 4; exon_id "ENSE00002031522.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000155750.1"; havana_transcript "OTTHUMT00000341494.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13117 chr22 HAVANA exon 23735966 23736026 . + . gene_id "ENSG00000248409.1"; transcript_id "ENST00000512987.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1269D1.8"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1269D1.8-001"; exon_number 5; exon_id "ENSE00002055090.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000155750.1"; havana_transcript "OTTHUMT00000341494.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13118 chr22 HAVANA gene 23775751 23777258 . + . gene_id "ENSG00000234928.1"; transcript_id "ENSG00000234928.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000344.3"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AP000344.3"; level 1; havana_gene "OTTHUMG00000150668.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13119 chr22 HAVANA transcript 23775751 23777258 . + . gene_id "ENSG00000234928.1"; transcript_id "ENST00000449711.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000344.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000344.3-001"; level 1; tag "mRNA_end_NF"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150668.1"; havana_transcript "OTTHUMT00000319542.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13120 chr22 HAVANA exon 23775751 23776248 . + . gene_id "ENSG00000234928.1"; transcript_id "ENST00000449711.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000344.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000344.3-001"; exon_number 1; exon_id "ENSE00001603940.1"; level 1; tag "mRNA_end_NF"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150668.1"; havana_transcript "OTTHUMT00000319542.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13121 chr22 HAVANA exon 23776747 23776917 . + . gene_id "ENSG00000234928.1"; transcript_id "ENST00000449711.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000344.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000344.3-001"; exon_number 2; exon_id "ENSE00001742664.1"; level 1; tag "mRNA_end_NF"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150668.1"; havana_transcript "OTTHUMT00000319542.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13122 chr22 HAVANA exon 23777011 23777258 . + . gene_id "ENSG00000234928.1"; transcript_id "ENST00000449711.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000344.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000344.3-001"; exon_number 3; exon_id "ENSE00001744937.1"; level 1; tag "mRNA_end_NF"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150668.1"; havana_transcript "OTTHUMT00000319542.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13123 chr22 HAVANA transcript 23776358 23776918 . + . gene_id "ENSG00000234928.1"; transcript_id "ENST00000428415.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000344.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000344.3-002"; level 1; tag "mRNA_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150668.1"; havana_transcript "OTTHUMT00000319543.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13124 chr22 HAVANA exon 23776358 23776522 . + . gene_id "ENSG00000234928.1"; transcript_id "ENST00000428415.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000344.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000344.3-002"; exon_number 1; exon_id "ENSE00001799473.1"; level 1; tag "mRNA_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150668.1"; havana_transcript "OTTHUMT00000319543.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13125 chr22 HAVANA exon 23776747 23776918 . + . gene_id "ENSG00000234928.1"; transcript_id "ENST00000428415.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000344.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000344.3-002"; exon_number 2; exon_id "ENSE00001613146.1"; level 1; tag "mRNA_end_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150668.1"; havana_transcript "OTTHUMT00000319543.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13126 chr22 HAVANA gene 23788785 23803020 . + . gene_id "ENSG00000227755.1"; transcript_id "ENSG00000227755.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000344.4"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000344.4"; level 2; havana_gene "OTTHUMG00000150667.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13127 chr22 HAVANA transcript 23788785 23802975 . + . gene_id "ENSG00000227755.1"; transcript_id "ENST00000454268.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000344.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000344.4-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150667.2"; havana_transcript "OTTHUMT00000319541.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13128 chr22 HAVANA exon 23788785 23788989 . + . gene_id "ENSG00000227755.1"; transcript_id "ENST00000454268.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000344.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000344.4-005"; exon_number 1; exon_id "ENSE00001722675.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150667.2"; havana_transcript "OTTHUMT00000319541.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13129 chr22 HAVANA exon 23802540 23802975 . + . gene_id "ENSG00000227755.1"; transcript_id "ENST00000454268.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000344.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000344.4-005"; exon_number 2; exon_id "ENSE00001799800.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150667.2"; havana_transcript "OTTHUMT00000319541.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13130 chr22 HAVANA transcript 23800566 23803020 . + . gene_id "ENSG00000227755.1"; transcript_id "ENST00000457193.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000344.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000344.4-003"; level 2; havana_gene "OTTHUMG00000150667.2"; havana_transcript "OTTHUMT00000319539.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13131 chr22 HAVANA exon 23800566 23800670 . + . gene_id "ENSG00000227755.1"; transcript_id "ENST00000457193.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000344.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000344.4-003"; exon_number 1; exon_id "ENSE00001652245.1"; level 2; havana_gene "OTTHUMG00000150667.2"; havana_transcript "OTTHUMT00000319539.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13132 chr22 HAVANA exon 23802540 23803020 . + . gene_id "ENSG00000227755.1"; transcript_id "ENST00000457193.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000344.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000344.4-003"; exon_number 2; exon_id "ENSE00001678218.1"; level 2; havana_gene "OTTHUMG00000150667.2"; havana_transcript "OTTHUMT00000319539.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13133 chr22 HAVANA transcript 23802536 23802698 . + . gene_id "ENSG00000227755.1"; transcript_id "ENST00000426024.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000344.4"; transcript_type "transcribed_processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000344.4-002"; level 2; ont "PGO:0000004"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150667.2"; havana_transcript "OTTHUMT00000319538.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13134 chr22 HAVANA exon 23802536 23802698 . + . gene_id "ENSG00000227755.1"; transcript_id "ENST00000426024.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000344.4"; transcript_type "transcribed_processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000344.4-002"; exon_number 1; exon_id "ENSE00001730065.1"; level 2; ont "PGO:0000004"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150667.2"; havana_transcript "OTTHUMT00000319538.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13135 chr22 HAVANA gene 23804273 23829167 . - . gene_id "ENSG00000178248.10"; transcript_id "ENSG00000178248.10"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AP000345.1"; level 2; havana_gene "OTTHUMG00000150669.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13136 chr22 HAVANA transcript 23804273 23829167 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000320372.9"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150669.1"; havana_transcript "OTTHUMT00000319544.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13137 chr22 HAVANA exon 23829066 23829167 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000320372.9"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-001"; exon_number 1; exon_id "ENSE00001378654.6"; level 2; tag "basic"; havana_gene "OTTHUMG00000150669.1"; havana_transcript "OTTHUMT00000319544.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13138 chr22 HAVANA exon 23825255 23825313 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000320372.9"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-001"; exon_number 2; exon_id "ENSE00003687953.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150669.1"; havana_transcript "OTTHUMT00000319544.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13139 chr22 HAVANA exon 23824762 23824792 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000320372.9"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-001"; exon_number 3; exon_id "ENSE00003634277.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150669.1"; havana_transcript "OTTHUMT00000319544.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13140 chr22 HAVANA exon 23822604 23822687 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000320372.9"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-001"; exon_number 4; exon_id "ENSE00003460336.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150669.1"; havana_transcript "OTTHUMT00000319544.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13141 chr22 HAVANA exon 23816064 23816125 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000320372.9"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-001"; exon_number 5; exon_id "ENSE00003599827.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150669.1"; havana_transcript "OTTHUMT00000319544.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13142 chr22 HAVANA exon 23815565 23815598 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000320372.9"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-001"; exon_number 6; exon_id "ENSE00003549645.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150669.1"; havana_transcript "OTTHUMT00000319544.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13143 chr22 HAVANA exon 23812995 23813350 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000320372.9"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-001"; exon_number 7; exon_id "ENSE00003622042.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150669.1"; havana_transcript "OTTHUMT00000319544.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13144 chr22 HAVANA exon 23812502 23812523 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000320372.9"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-001"; exon_number 8; exon_id "ENSE00003493698.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150669.1"; havana_transcript "OTTHUMT00000319544.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13145 chr22 HAVANA exon 23812183 23812224 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000320372.9"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-001"; exon_number 9; exon_id "ENSE00001280542.3"; level 2; tag "basic"; havana_gene "OTTHUMG00000150669.1"; havana_transcript "OTTHUMT00000319544.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13146 chr22 HAVANA exon 23811524 23811674 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000320372.9"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-001"; exon_number 10; exon_id "ENSE00001434467.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150669.1"; havana_transcript "OTTHUMT00000319544.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13147 chr22 HAVANA exon 23809462 23809503 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000320372.9"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-001"; exon_number 11; exon_id "ENSE00001432676.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150669.1"; havana_transcript "OTTHUMT00000319544.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13148 chr22 HAVANA exon 23804273 23804865 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000320372.9"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-001"; exon_number 12; exon_id "ENSE00001433271.3"; level 2; tag "basic"; havana_gene "OTTHUMG00000150669.1"; havana_transcript "OTTHUMT00000319544.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13149 chr22 ENSEMBL transcript 23812181 23829093 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000539460.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-201"; level 3; havana_gene "OTTHUMG00000150669.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13150 chr22 ENSEMBL exon 23829066 23829093 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000539460.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-201"; exon_number 1; exon_id "ENSE00002263774.1"; level 3; havana_gene "OTTHUMG00000150669.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13151 chr22 ENSEMBL exon 23825255 23825313 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000539460.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-201"; exon_number 2; exon_id "ENSE00003671865.1"; level 3; havana_gene "OTTHUMG00000150669.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13152 chr22 ENSEMBL exon 23824762 23824792 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000539460.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-201"; exon_number 3; exon_id "ENSE00003554740.1"; level 3; havana_gene "OTTHUMG00000150669.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13153 chr22 ENSEMBL exon 23822604 23822687 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000539460.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-201"; exon_number 4; exon_id "ENSE00003615657.1"; level 3; havana_gene "OTTHUMG00000150669.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13154 chr22 ENSEMBL exon 23816064 23816125 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000539460.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-201"; exon_number 5; exon_id "ENSE00003554112.1"; level 3; havana_gene "OTTHUMG00000150669.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13155 chr22 ENSEMBL exon 23815565 23815598 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000539460.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-201"; exon_number 6; exon_id "ENSE00003570334.1"; level 3; havana_gene "OTTHUMG00000150669.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13156 chr22 ENSEMBL exon 23812995 23813350 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000539460.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-201"; exon_number 7; exon_id "ENSE00003509971.1"; level 3; havana_gene "OTTHUMG00000150669.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13157 chr22 ENSEMBL exon 23812502 23812523 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000539460.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-201"; exon_number 8; exon_id "ENSE00003559328.1"; level 3; havana_gene "OTTHUMG00000150669.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13158 chr22 ENSEMBL exon 23812181 23812224 . - . gene_id "ENSG00000178248.10"; transcript_id "ENST00000539460.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.1-201"; exon_number 9; exon_id "ENSE00002266483.1"; level 3; havana_gene "OTTHUMG00000150669.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13159 chr22 HAVANA gene 23854681 23855789 . - . gene_id "ENSG00000225413.2"; transcript_id "ENSG00000225413.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.4"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AP000345.4"; level 2; havana_gene "OTTHUMG00000150840.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13160 chr22 HAVANA transcript 23854681 23855789 . - . gene_id "ENSG00000225413.2"; transcript_id "ENST00000432249.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.4"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.4-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150840.2"; havana_transcript "OTTHUMT00000320304.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13161 chr22 HAVANA exon 23855463 23855789 . - . gene_id "ENSG00000225413.2"; transcript_id "ENST00000432249.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.4"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.4-001"; exon_number 1; exon_id "ENSE00001647995.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150840.2"; havana_transcript "OTTHUMT00000320304.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13162 chr22 HAVANA exon 23854681 23854830 . - . gene_id "ENSG00000225413.2"; transcript_id "ENST00000432249.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000345.4"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000345.4-001"; exon_number 2; exon_id "ENSE00001711085.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150840.2"; havana_transcript "OTTHUMT00000320304.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13163 chr22 HAVANA gene 23909251 23915694 . + . gene_id "ENSG00000224277.1"; transcript_id "ENSG00000224277.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000345.2"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AP000345.2"; level 1; havana_gene "OTTHUMG00000150666.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13164 chr22 HAVANA transcript 23909251 23915309 . + . gene_id "ENSG00000224277.1"; transcript_id "ENST00000454863.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000345.2"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AP000345.2-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150666.1"; havana_transcript "OTTHUMT00000319536.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13165 chr22 HAVANA exon 23909251 23909511 . + . gene_id "ENSG00000224277.1"; transcript_id "ENST00000454863.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000345.2"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AP000345.2-002"; exon_number 1; exon_id "ENSE00001656632.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150666.1"; havana_transcript "OTTHUMT00000319536.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13166 chr22 HAVANA exon 23910239 23910284 . + . gene_id "ENSG00000224277.1"; transcript_id "ENST00000454863.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000345.2"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AP000345.2-002"; exon_number 2; exon_id "ENSE00001624174.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150666.1"; havana_transcript "OTTHUMT00000319536.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13167 chr22 HAVANA exon 23910747 23910829 . + . gene_id "ENSG00000224277.1"; transcript_id "ENST00000454863.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000345.2"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AP000345.2-002"; exon_number 3; exon_id "ENSE00001673817.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150666.1"; havana_transcript "OTTHUMT00000319536.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13168 chr22 HAVANA exon 23914733 23914811 . + . gene_id "ENSG00000224277.1"; transcript_id "ENST00000454863.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000345.2"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AP000345.2-002"; exon_number 4; exon_id "ENSE00001710314.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150666.1"; havana_transcript "OTTHUMT00000319536.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13169 chr22 HAVANA exon 23915210 23915309 . + . gene_id "ENSG00000224277.1"; transcript_id "ENST00000454863.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000345.2"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AP000345.2-002"; exon_number 5; exon_id "ENSE00001647001.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150666.1"; havana_transcript "OTTHUMT00000319536.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13170 chr22 HAVANA transcript 23909251 23915694 . + . gene_id "ENSG00000224277.1"; transcript_id "ENST00000458318.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000345.2"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AP000345.2-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150666.1"; havana_transcript "OTTHUMT00000319535.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13171 chr22 HAVANA exon 23909251 23909511 . + . gene_id "ENSG00000224277.1"; transcript_id "ENST00000458318.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000345.2"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AP000345.2-001"; exon_number 1; exon_id "ENSE00001656632.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150666.1"; havana_transcript "OTTHUMT00000319535.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13172 chr22 HAVANA exon 23910239 23910284 . + . gene_id "ENSG00000224277.1"; transcript_id "ENST00000458318.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000345.2"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AP000345.2-001"; exon_number 2; exon_id "ENSE00001624174.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150666.1"; havana_transcript "OTTHUMT00000319535.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13173 chr22 HAVANA exon 23910747 23910829 . + . gene_id "ENSG00000224277.1"; transcript_id "ENST00000458318.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000345.2"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AP000345.2-001"; exon_number 3; exon_id "ENSE00001673817.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150666.1"; havana_transcript "OTTHUMT00000319535.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13174 chr22 HAVANA exon 23915652 23915694 . + . gene_id "ENSG00000224277.1"; transcript_id "ENST00000458318.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000345.2"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AP000345.2-001"; exon_number 4; exon_id "ENSE00001672041.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150666.1"; havana_transcript "OTTHUMT00000319535.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13175 chr22 HAVANA gene 23915312 23922495 . - . gene_id "ENSG00000128322.6"; transcript_id "ENSG00000128322.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL1"; level 2; havana_gene "OTTHUMG00000150673.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13176 chr22 HAVANA transcript 23915312 23922426 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000249053.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL1-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13810.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319568.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13177 chr22 HAVANA exon 23922172 23922426 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000249053.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL1-002"; exon_number 1; exon_id "ENSE00001912592.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13810.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319568.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13178 chr22 HAVANA CDS 23922172 23922377 . - 0 gene_id "ENSG00000128322.6"; transcript_id "ENST00000249053.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL1-002"; exon_number 1; exon_id "ENSE00001912592.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13810.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319568.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13179 chr22 HAVANA start_codon 23922375 23922377 . - 0 gene_id "ENSG00000128322.6"; transcript_id "ENST00000249053.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL1-002"; exon_number 1; exon_id "ENSE00001912592.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13810.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319568.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13180 chr22 HAVANA exon 23915312 23915772 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000249053.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL1-002"; exon_number 2; exon_id "ENSE00003515064.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13810.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319568.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13181 chr22 HAVANA CDS 23915727 23915772 . - 1 gene_id "ENSG00000128322.6"; transcript_id "ENST00000249053.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL1-002"; exon_number 2; exon_id "ENSE00003515064.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13810.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319568.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13182 chr22 HAVANA stop_codon 23915724 23915726 . - 0 gene_id "ENSG00000128322.6"; transcript_id "ENST00000249053.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL1-002"; exon_number 2; exon_id "ENSE00003515064.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13810.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319568.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13183 chr22 HAVANA UTR 23922378 23922426 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000249053.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL1-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13810.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319568.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13184 chr22 HAVANA UTR 23915312 23915726 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000249053.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IGLL1-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13810.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319568.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13185 chr22 HAVANA transcript 23915312 23922495 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000330377.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13809.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13186 chr22 HAVANA exon 23922172 23922495 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000330377.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL1-001"; exon_number 1; exon_id "ENSE00001313083.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13809.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13187 chr22 HAVANA CDS 23922172 23922377 . - 0 gene_id "ENSG00000128322.6"; transcript_id "ENST00000330377.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL1-001"; exon_number 1; exon_id "ENSE00001313083.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13809.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13188 chr22 HAVANA start_codon 23922375 23922377 . - 0 gene_id "ENSG00000128322.6"; transcript_id "ENST00000330377.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL1-001"; exon_number 1; exon_id "ENSE00001313083.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13809.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13189 chr22 HAVANA exon 23917154 23917269 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000330377.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL1-001"; exon_number 2; exon_id "ENSE00000879461.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13809.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13190 chr22 HAVANA CDS 23917154 23917269 . - 1 gene_id "ENSG00000128322.6"; transcript_id "ENST00000330377.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL1-001"; exon_number 2; exon_id "ENSE00000879461.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13809.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13191 chr22 HAVANA exon 23915312 23915772 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000330377.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL1-001"; exon_number 3; exon_id "ENSE00003586626.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13809.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13192 chr22 HAVANA CDS 23915456 23915772 . - 2 gene_id "ENSG00000128322.6"; transcript_id "ENST00000330377.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL1-001"; exon_number 3; exon_id "ENSE00003586626.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13809.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13193 chr22 HAVANA stop_codon 23915453 23915455 . - 0 gene_id "ENSG00000128322.6"; transcript_id "ENST00000330377.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL1-001"; exon_number 3; exon_id "ENSE00003586626.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13809.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13194 chr22 HAVANA UTR 23922378 23922495 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000330377.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13809.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13195 chr22 HAVANA UTR 23915312 23915455 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000330377.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IGLL1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13809.1"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319569.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13196 chr22 HAVANA transcript 23915556 23922489 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000438703.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "IGLL1-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13197 chr22 HAVANA exon 23922172 23922489 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000438703.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "IGLL1-003"; exon_number 1; exon_id "ENSE00001631700.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13198 chr22 HAVANA CDS 23922172 23922377 . - 0 gene_id "ENSG00000128322.6"; transcript_id "ENST00000438703.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "IGLL1-003"; exon_number 1; exon_id "ENSE00001631700.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13199 chr22 HAVANA start_codon 23922375 23922377 . - 0 gene_id "ENSG00000128322.6"; transcript_id "ENST00000438703.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "IGLL1-003"; exon_number 1; exon_id "ENSE00001631700.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13200 chr22 HAVANA exon 23917154 23917272 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000438703.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "IGLL1-003"; exon_number 2; exon_id "ENSE00001591537.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13201 chr22 HAVANA CDS 23917154 23917272 . - 1 gene_id "ENSG00000128322.6"; transcript_id "ENST00000438703.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "IGLL1-003"; exon_number 2; exon_id "ENSE00001591537.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13202 chr22 HAVANA exon 23915556 23915772 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000438703.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "IGLL1-003"; exon_number 3; exon_id "ENSE00001625028.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13203 chr22 HAVANA CDS 23915556 23915772 . - 2 gene_id "ENSG00000128322.6"; transcript_id "ENST00000438703.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "IGLL1-003"; exon_number 3; exon_id "ENSE00001625028.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13204 chr22 HAVANA UTR 23922378 23922489 . - . gene_id "ENSG00000128322.6"; transcript_id "ENST00000438703.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGLL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "IGLL1-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150673.1"; havana_transcript "OTTHUMT00000319570.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13205 chr22 HAVANA gene 23923067 23926046 . - . gene_id "ENSG00000272733.1"; transcript_id "ENSG00000272733.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-208E9.1"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "KB-208E9.1"; level 2; havana_gene "OTTHUMG00000186121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13206 chr22 HAVANA transcript 23923067 23926046 . - . gene_id "ENSG00000272733.1"; transcript_id "ENST00000608615.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-208E9.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-208E9.1-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186121.1"; havana_transcript "OTTHUMT00000472290.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13207 chr22 HAVANA exon 23925996 23926046 . - . gene_id "ENSG00000272733.1"; transcript_id "ENST00000608615.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-208E9.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-208E9.1-001"; exon_number 1; exon_id "ENSE00003703309.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186121.1"; havana_transcript "OTTHUMT00000472290.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13208 chr22 HAVANA exon 23925320 23925665 . - . gene_id "ENSG00000272733.1"; transcript_id "ENST00000608615.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-208E9.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-208E9.1-001"; exon_number 2; exon_id "ENSE00003706848.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186121.1"; havana_transcript "OTTHUMT00000472290.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13209 chr22 HAVANA exon 23923067 23923750 . - . gene_id "ENSG00000272733.1"; transcript_id "ENST00000608615.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-208E9.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-208E9.1-001"; exon_number 3; exon_id "ENSE00003709918.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186121.1"; havana_transcript "OTTHUMT00000472290.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13210 chr22 HAVANA gene 23950639 23974508 . - . gene_id "ENSG00000189269.8"; transcript_id "ENSG00000189269.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43"; level 2; havana_gene "OTTHUMG00000186352.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13211 chr22 HAVANA transcript 23950639 23974508 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13212 chr22 HAVANA exon 23974003 23974508 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 1; exon_id "ENSE00001373382.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13213 chr22 HAVANA CDS 23974003 23974210 . - 0 gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 1; exon_id "ENSE00001373382.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13214 chr22 HAVANA start_codon 23974208 23974210 . - 0 gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 1; exon_id "ENSE00001373382.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13215 chr22 HAVANA exon 23968168 23968235 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 2; exon_id "ENSE00001730346.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13216 chr22 HAVANA CDS 23968168 23968235 . - 2 gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 2; exon_id "ENSE00001730346.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13217 chr22 HAVANA exon 23967070 23967091 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 3; exon_id "ENSE00001694755.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13218 chr22 HAVANA CDS 23967070 23967091 . - 0 gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 3; exon_id "ENSE00001694755.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13219 chr22 HAVANA exon 23964278 23964363 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 4; exon_id "ENSE00001493524.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13220 chr22 HAVANA CDS 23964278 23964363 . - 2 gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 4; exon_id "ENSE00001493524.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13221 chr22 HAVANA exon 23962781 23962802 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 5; exon_id "ENSE00001742206.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13222 chr22 HAVANA CDS 23962781 23962802 . - 0 gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 5; exon_id "ENSE00001742206.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13223 chr22 HAVANA exon 23961551 23961580 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 6; exon_id "ENSE00001493521.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13224 chr22 HAVANA CDS 23961551 23961580 . - 2 gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 6; exon_id "ENSE00001493521.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13225 chr22 HAVANA exon 23959762 23959844 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 7; exon_id "ENSE00001493520.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13226 chr22 HAVANA CDS 23959762 23959844 . - 2 gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 7; exon_id "ENSE00001493520.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13227 chr22 HAVANA exon 23959040 23959061 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 8; exon_id "ENSE00001668804.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13228 chr22 HAVANA CDS 23959040 23959061 . - 0 gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 8; exon_id "ENSE00001668804.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13229 chr22 HAVANA exon 23956322 23956401 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 9; exon_id "ENSE00001493518.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13230 chr22 HAVANA CDS 23956322 23956401 . - 2 gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 9; exon_id "ENSE00001493518.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13231 chr22 HAVANA exon 23955826 23955847 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 10; exon_id "ENSE00001493517.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13232 chr22 HAVANA CDS 23955826 23955847 . - 0 gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 10; exon_id "ENSE00001493517.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13233 chr22 HAVANA exon 23955476 23955517 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 11; exon_id "ENSE00001493516.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13234 chr22 HAVANA CDS 23955476 23955517 . - 2 gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 11; exon_id "ENSE00001493516.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13235 chr22 HAVANA exon 23950639 23950955 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 12; exon_id "ENSE00001542762.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13236 chr22 HAVANA CDS 23950954 23950955 . - 2 gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 12; exon_id "ENSE00001542762.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13237 chr22 HAVANA stop_codon 23950951 23950953 . - 0 gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; exon_number 12; exon_id "ENSE00001542762.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13238 chr22 HAVANA UTR 23974211 23974508 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13239 chr22 HAVANA UTR 23950639 23950953 . - . gene_id "ENSG00000189269.8"; transcript_id "ENST00000317749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf43"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf43-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42985.1"; havana_gene "OTTHUMG00000186352.1"; havana_transcript "OTTHUMT00000319708.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13240 chr22 HAVANA gene 23972805 23981128 . - . gene_id "ENSG00000211683.3"; transcript_id "ENSG00000211683.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.3"; transcript_type "processed_transcript"; transcript_status "NOVEL"; transcript_name "KB-1572G7.3"; level 2; havana_gene "OTTHUMG00000150710.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13241 chr22 HAVANA transcript 23972805 23981128 . - . gene_id "ENSG00000211683.3"; transcript_id "ENST00000390329.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.3-001"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150710.4"; havana_transcript "OTTHUMT00000471969.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13242 chr22 HAVANA exon 23980938 23981128 . - . gene_id "ENSG00000211683.3"; transcript_id "ENST00000390329.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.3-001"; exon_number 1; exon_id "ENSE00001507832.2"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150710.4"; havana_transcript "OTTHUMT00000471969.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13243 chr22 HAVANA exon 23979870 23979991 . - . gene_id "ENSG00000211683.3"; transcript_id "ENST00000390329.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.3-001"; exon_number 2; exon_id "ENSE00002074261.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150710.4"; havana_transcript "OTTHUMT00000471969.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13244 chr22 HAVANA exon 23978123 23978270 . - . gene_id "ENSG00000211683.3"; transcript_id "ENST00000390329.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.3-001"; exon_number 3; exon_id "ENSE00002063990.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150710.4"; havana_transcript "OTTHUMT00000471969.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13245 chr22 HAVANA exon 23974975 23975097 . - . gene_id "ENSG00000211683.3"; transcript_id "ENST00000390329.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.3-001"; exon_number 4; exon_id "ENSE00002060328.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150710.4"; havana_transcript "OTTHUMT00000471969.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13246 chr22 HAVANA exon 23974003 23974160 . - . gene_id "ENSG00000211683.3"; transcript_id "ENST00000390329.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.3-001"; exon_number 5; exon_id "ENSE00001812125.2"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150710.4"; havana_transcript "OTTHUMT00000471969.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13247 chr22 HAVANA exon 23972805 23973149 . - . gene_id "ENSG00000211683.3"; transcript_id "ENST00000390329.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.3-001"; exon_number 6; exon_id "ENSE00001918414.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150710.4"; havana_transcript "OTTHUMT00000471969.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13248 chr22 HAVANA gene 23980674 24059543 . - . gene_id "ENSG00000228315.7"; transcript_id "ENSG00000228315.7"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "NOVEL"; transcript_name "GUSBP11"; level 2; havana_gene "OTTHUMG00000150709.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13249 chr22 HAVANA transcript 23980674 23995073 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000430357.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-003"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471970.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13250 chr22 HAVANA exon 23995048 23995073 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000430357.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-003"; exon_number 1; exon_id "ENSE00001789998.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471970.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13251 chr22 HAVANA exon 23994666 23994763 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000430357.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-003"; exon_number 2; exon_id "ENSE00001757224.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471970.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13252 chr22 HAVANA exon 23982495 23982610 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000430357.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-003"; exon_number 3; exon_id "ENSE00001718973.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471970.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13253 chr22 HAVANA exon 23980674 23981129 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000430357.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-003"; exon_number 4; exon_id "ENSE00001794195.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471970.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13254 chr22 HAVANA transcript 23980674 24035338 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000455485.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-005"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319697.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13255 chr22 HAVANA exon 24032423 24035338 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000455485.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-005"; exon_number 1; exon_id "ENSE00001593984.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319697.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13256 chr22 HAVANA exon 24029018 24029182 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000455485.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-005"; exon_number 2; exon_id "ENSE00003710031.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319697.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13257 chr22 HAVANA exon 24025912 24026054 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000455485.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-005"; exon_number 3; exon_id "ENSE00003709982.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319697.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13258 chr22 HAVANA exon 24002052 24002187 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000455485.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-005"; exon_number 4; exon_id "ENSE00003707981.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319697.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13259 chr22 HAVANA exon 23980674 23981129 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000455485.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-005"; exon_number 5; exon_id "ENSE00001794195.1"; level 2; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319697.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13260 chr22 HAVANA transcript 23980674 24059508 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000452737.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-004"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319694.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13261 chr22 HAVANA exon 24059295 24059508 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000452737.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-004"; exon_number 1; exon_id "ENSE00001390212.2"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319694.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13262 chr22 HAVANA exon 24057196 24057381 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000452737.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-004"; exon_number 2; exon_id "ENSE00003708941.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319694.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13263 chr22 HAVANA exon 24056374 24056473 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000452737.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-004"; exon_number 3; exon_id "ENSE00001694296.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319694.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13264 chr22 HAVANA exon 24051973 24052054 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000452737.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-004"; exon_number 4; exon_id "ENSE00003711244.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319694.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13265 chr22 HAVANA exon 24051317 24051428 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000452737.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-004"; exon_number 5; exon_id "ENSE00003709117.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319694.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13266 chr22 HAVANA exon 24047616 24047728 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000452737.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-004"; exon_number 6; exon_id "ENSE00003710883.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319694.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13267 chr22 HAVANA exon 24042913 24043032 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000452737.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-004"; exon_number 7; exon_id "ENSE00001604087.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319694.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13268 chr22 HAVANA exon 24025912 24026054 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000452737.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-004"; exon_number 8; exon_id "ENSE00003709982.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319694.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13269 chr22 HAVANA exon 24002052 24002187 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000452737.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-004"; exon_number 9; exon_id "ENSE00003707981.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319694.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13270 chr22 HAVANA exon 23980674 23981129 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000452737.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-004"; exon_number 10; exon_id "ENSE00001794195.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000319694.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13271 chr22 HAVANA transcript 23980674 24059508 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000451837.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-006"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471971.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13272 chr22 HAVANA exon 24059295 24059508 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000451837.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-006"; exon_number 1; exon_id "ENSE00001390212.2"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471971.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13273 chr22 HAVANA exon 24057196 24057381 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000451837.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-006"; exon_number 2; exon_id "ENSE00003708941.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471971.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13274 chr22 HAVANA exon 24056374 24056529 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000451837.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-006"; exon_number 3; exon_id "ENSE00003703491.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471971.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13275 chr22 HAVANA exon 24051973 24052054 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000451837.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-006"; exon_number 4; exon_id "ENSE00003711244.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471971.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13276 chr22 HAVANA exon 24051317 24051428 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000451837.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-006"; exon_number 5; exon_id "ENSE00003709117.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471971.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13277 chr22 HAVANA exon 24047616 24047728 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000451837.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-006"; exon_number 6; exon_id "ENSE00003710883.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471971.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13278 chr22 HAVANA exon 24036306 24037704 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000451837.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-006"; exon_number 7; exon_id "ENSE00003709208.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471971.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13279 chr22 HAVANA exon 24032423 24032543 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000451837.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-006"; exon_number 8; exon_id "ENSE00001649479.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471971.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13280 chr22 HAVANA exon 24025912 24026054 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000451837.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-006"; exon_number 9; exon_id "ENSE00003709982.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471971.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13281 chr22 HAVANA exon 24002052 24002187 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000451837.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-006"; exon_number 10; exon_id "ENSE00003707981.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471971.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13282 chr22 HAVANA exon 23982495 23982610 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000451837.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-006"; exon_number 11; exon_id "ENSE00001718973.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471971.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13283 chr22 HAVANA exon 23980674 23981129 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000451837.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-006"; exon_number 12; exon_id "ENSE00001794195.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471971.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13284 chr22 HAVANA transcript 23980674 24059543 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000422506.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-001"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471972.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13285 chr22 HAVANA exon 24059218 24059543 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000422506.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-001"; exon_number 1; exon_id "ENSE00001601218.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471972.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13286 chr22 HAVANA exon 24057196 24057381 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000422506.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-001"; exon_number 2; exon_id "ENSE00003708941.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471972.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13287 chr22 HAVANA exon 24056374 24056529 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000422506.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-001"; exon_number 3; exon_id "ENSE00003703491.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471972.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13288 chr22 HAVANA exon 24051973 24052054 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000422506.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-001"; exon_number 4; exon_id "ENSE00003711244.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471972.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13289 chr22 HAVANA exon 24051317 24051428 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000422506.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-001"; exon_number 5; exon_id "ENSE00003709117.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471972.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13290 chr22 HAVANA exon 24047616 24047728 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000422506.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-001"; exon_number 6; exon_id "ENSE00003710883.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471972.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13291 chr22 HAVANA exon 24037360 24037704 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000422506.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-001"; exon_number 7; exon_id "ENSE00001736350.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471972.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13292 chr22 HAVANA exon 24025912 24026054 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000422506.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-001"; exon_number 8; exon_id "ENSE00003709982.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471972.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13293 chr22 HAVANA exon 24002052 24002187 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000422506.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-001"; exon_number 9; exon_id "ENSE00003707981.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471972.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13294 chr22 HAVANA exon 23980674 23981129 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000422506.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-001"; exon_number 10; exon_id "ENSE00001794195.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471972.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13295 chr22 HAVANA transcript 23980674 24059543 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000445682.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-002"; level 2; tag "non_canonical_TEC"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471973.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13296 chr22 HAVANA exon 24059218 24059543 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000445682.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-002"; exon_number 1; exon_id "ENSE00001601218.1"; level 2; tag "non_canonical_TEC"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471973.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13297 chr22 HAVANA exon 24057196 24057381 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000445682.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-002"; exon_number 2; exon_id "ENSE00003708941.1"; level 2; tag "non_canonical_TEC"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471973.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13298 chr22 HAVANA exon 24056374 24056529 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000445682.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-002"; exon_number 3; exon_id "ENSE00003703491.1"; level 2; tag "non_canonical_TEC"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471973.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13299 chr22 HAVANA exon 24051973 24052054 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000445682.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-002"; exon_number 4; exon_id "ENSE00003711244.1"; level 2; tag "non_canonical_TEC"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471973.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13300 chr22 HAVANA exon 24051317 24051428 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000445682.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-002"; exon_number 5; exon_id "ENSE00003709117.1"; level 2; tag "non_canonical_TEC"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471973.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13301 chr22 HAVANA exon 24047616 24047728 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000445682.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-002"; exon_number 6; exon_id "ENSE00003710883.1"; level 2; tag "non_canonical_TEC"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471973.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13302 chr22 HAVANA exon 24042913 24043032 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000445682.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-002"; exon_number 7; exon_id "ENSE00001604087.1"; level 2; tag "non_canonical_TEC"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471973.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13303 chr22 HAVANA exon 24036306 24037704 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000445682.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-002"; exon_number 8; exon_id "ENSE00003709208.1"; level 2; tag "non_canonical_TEC"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471973.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13304 chr22 HAVANA exon 24032423 24032543 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000445682.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-002"; exon_number 9; exon_id "ENSE00001649479.1"; level 2; tag "non_canonical_TEC"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471973.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13305 chr22 HAVANA exon 24025912 24026054 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000445682.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-002"; exon_number 10; exon_id "ENSE00003709982.1"; level 2; tag "non_canonical_TEC"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471973.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13306 chr22 HAVANA exon 24002052 24002187 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000445682.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-002"; exon_number 11; exon_id "ENSE00003707981.1"; level 2; tag "non_canonical_TEC"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471973.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13307 chr22 HAVANA exon 23980674 23981129 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000445682.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-002"; exon_number 12; exon_id "ENSE00001794195.1"; level 2; tag "non_canonical_TEC"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150709.2"; havana_transcript "OTTHUMT00000471973.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13308 chr22 ENSEMBL transcript 24002053 24032591 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000608454.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-201"; level 3; havana_gene "OTTHUMG00000150709.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13309 chr22 ENSEMBL exon 24032419 24032591 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000608454.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-201"; exon_number 1; exon_id "ENSE00003706198.1"; level 3; havana_gene "OTTHUMG00000150709.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13310 chr22 ENSEMBL exon 24025912 24026054 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000608454.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-201"; exon_number 2; exon_id "ENSE00003710576.1"; level 3; havana_gene "OTTHUMG00000150709.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13311 chr22 ENSEMBL exon 24002053 24002187 . - . gene_id "ENSG00000228315.7"; transcript_id "ENST00000608454.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "GUSBP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUSBP11-201"; exon_number 3; exon_id "ENSE00003709694.1"; level 3; havana_gene "OTTHUMG00000150709.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13312 chr22 HAVANA gene 23980679 23982949 . - . gene_id "ENSG00000234353.2"; transcript_id "ENSG00000234353.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.4"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000347.4"; level 2; havana_gene "OTTHUMG00000150708.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13313 chr22 HAVANA transcript 23980679 23982949 . - . gene_id "ENSG00000234353.2"; transcript_id "ENST00000430707.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.4-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150708.3"; havana_transcript "OTTHUMT00000352688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13314 chr22 HAVANA exon 23982495 23982949 . - . gene_id "ENSG00000234353.2"; transcript_id "ENST00000430707.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.4-002"; exon_number 1; exon_id "ENSE00001943189.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150708.3"; havana_transcript "OTTHUMT00000352688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13315 chr22 HAVANA exon 23980679 23981129 . - . gene_id "ENSG00000234353.2"; transcript_id "ENST00000430707.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.4-002"; exon_number 2; exon_id "ENSE00001716673.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150708.3"; havana_transcript "OTTHUMT00000352688.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13316 chr22 HAVANA transcript 23980865 23982612 . - . gene_id "ENSG00000234353.2"; transcript_id "ENST00000425948.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.4"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000347.4-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150708.3"; havana_transcript "OTTHUMT00000319690.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13317 chr22 HAVANA exon 23982495 23982612 . - . gene_id "ENSG00000234353.2"; transcript_id "ENST00000425948.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.4"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000347.4-001"; exon_number 1; exon_id "ENSE00001699593.2"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150708.3"; havana_transcript "OTTHUMT00000319690.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13318 chr22 HAVANA exon 23980865 23981129 . - . gene_id "ENSG00000234353.2"; transcript_id "ENST00000425948.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.4"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000347.4-001"; exon_number 2; exon_id "ENSE00001600066.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150708.3"; havana_transcript "OTTHUMT00000319690.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13319 chr22 HAVANA gene 23991400 23995521 . - . gene_id "ENSG00000244723.3"; transcript_id "ENSG00000244723.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ASLP1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "ASLP1"; level 2; havana_gene "OTTHUMG00000150707.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13320 chr22 HAVANA transcript 23991400 23995521 . - . gene_id "ENSG00000244723.3"; transcript_id "ENST00000428790.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ASLP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ASLP1-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150707.1"; havana_transcript "OTTHUMT00000319689.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13321 chr22 HAVANA exon 23995396 23995521 . - . gene_id "ENSG00000244723.3"; transcript_id "ENST00000428790.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ASLP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ASLP1-001"; exon_number 1; exon_id "ENSE00001612090.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150707.1"; havana_transcript "OTTHUMT00000319689.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13322 chr22 HAVANA exon 23995048 23995131 . - . gene_id "ENSG00000244723.3"; transcript_id "ENST00000428790.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ASLP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ASLP1-001"; exon_number 2; exon_id "ENSE00001742952.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150707.1"; havana_transcript "OTTHUMT00000319689.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13323 chr22 HAVANA exon 23994903 23994960 . - . gene_id "ENSG00000244723.3"; transcript_id "ENST00000428790.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ASLP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ASLP1-001"; exon_number 3; exon_id "ENSE00001710082.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150707.1"; havana_transcript "OTTHUMT00000319689.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13324 chr22 HAVANA exon 23994669 23994766 . - . gene_id "ENSG00000244723.3"; transcript_id "ENST00000428790.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ASLP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ASLP1-001"; exon_number 4; exon_id "ENSE00001632679.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150707.1"; havana_transcript "OTTHUMT00000319689.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13325 chr22 HAVANA exon 23991617 23991744 . - . gene_id "ENSG00000244723.3"; transcript_id "ENST00000428790.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ASLP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ASLP1-001"; exon_number 5; exon_id "ENSE00001771905.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150707.1"; havana_transcript "OTTHUMT00000319689.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13326 chr22 HAVANA exon 23991400 23991542 . - . gene_id "ENSG00000244723.3"; transcript_id "ENST00000428790.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ASLP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ASLP1-001"; exon_number 6; exon_id "ENSE00001696689.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150707.1"; havana_transcript "OTTHUMT00000319689.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13327 chr22 HAVANA gene 23995047 24059534 . - . gene_id "ENSG00000273000.1"; transcript_id "ENSG00000273000.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "NOVEL"; transcript_name "KB-1572G7.2"; level 2; havana_gene "OTTHUMG00000186001.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13328 chr22 HAVANA transcript 23995047 24032480 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000423913.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-003"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000319702.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13329 chr22 HAVANA exon 24032419 24032480 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000423913.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-003"; exon_number 1; exon_id "ENSE00001696449.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000319702.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13330 chr22 HAVANA exon 24029025 24029182 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000423913.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-003"; exon_number 2; exon_id "ENSE00003707879.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000319702.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13331 chr22 HAVANA exon 24025912 24026054 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000423913.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-003"; exon_number 3; exon_id "ENSE00003709003.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000319702.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13332 chr22 HAVANA exon 24002052 24002187 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000423913.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-003"; exon_number 4; exon_id "ENSE00003706394.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000319702.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13333 chr22 HAVANA exon 23995047 23995131 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000423913.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-003"; exon_number 5; exon_id "ENSE00001782953.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000319702.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13334 chr22 HAVANA transcript 23995356 24059534 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000421064.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-001"; level 2; tag "non_canonical_TEC"; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000471974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13335 chr22 HAVANA exon 24059295 24059534 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000421064.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-001"; exon_number 1; exon_id "ENSE00002233535.1"; level 2; tag "non_canonical_TEC"; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000471974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13336 chr22 HAVANA exon 24057196 24057381 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000421064.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-001"; exon_number 2; exon_id "ENSE00003704292.1"; level 2; tag "non_canonical_TEC"; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000471974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13337 chr22 HAVANA exon 24056374 24056529 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000421064.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-001"; exon_number 3; exon_id "ENSE00003705051.1"; level 2; tag "non_canonical_TEC"; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000471974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13338 chr22 HAVANA exon 24051973 24052054 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000421064.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-001"; exon_number 4; exon_id "ENSE00003705758.1"; level 2; tag "non_canonical_TEC"; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000471974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13339 chr22 HAVANA exon 24051317 24051428 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000421064.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-001"; exon_number 5; exon_id "ENSE00003705022.1"; level 2; tag "non_canonical_TEC"; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000471974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13340 chr22 HAVANA exon 24047616 24047728 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000421064.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-001"; exon_number 6; exon_id "ENSE00003706839.1"; level 2; tag "non_canonical_TEC"; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000471974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13341 chr22 HAVANA exon 24036306 24037704 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000421064.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-001"; exon_number 7; exon_id "ENSE00003707998.1"; level 2; tag "non_canonical_TEC"; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000471974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13342 chr22 HAVANA exon 24032419 24032543 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000421064.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-001"; exon_number 8; exon_id "ENSE00001606312.1"; level 2; tag "non_canonical_TEC"; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000471974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13343 chr22 HAVANA exon 24029018 24029182 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000421064.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-001"; exon_number 9; exon_id "ENSE00003711114.1"; level 2; tag "non_canonical_TEC"; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000471974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13344 chr22 HAVANA exon 24025912 24026054 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000421064.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-001"; exon_number 10; exon_id "ENSE00003709003.1"; level 2; tag "non_canonical_TEC"; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000471974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13345 chr22 HAVANA exon 24002052 24002187 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000421064.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-001"; exon_number 11; exon_id "ENSE00003706394.1"; level 2; tag "non_canonical_TEC"; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000471974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13346 chr22 HAVANA exon 23995356 23995539 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000421064.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-001"; exon_number 12; exon_id "ENSE00001653691.1"; level 2; tag "non_canonical_TEC"; tag "basic"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000471974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13347 chr22 HAVANA transcript 23995357 24029101 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000434893.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-002"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000320344.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13348 chr22 HAVANA exon 24029018 24029101 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000434893.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-002"; exon_number 1; exon_id "ENSE00001693609.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000320344.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13349 chr22 HAVANA exon 24002052 24002187 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000434893.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-002"; exon_number 2; exon_id "ENSE00003706394.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000320344.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13350 chr22 HAVANA exon 23995357 23995539 . - . gene_id "ENSG00000273000.1"; transcript_id "ENST00000434893.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "KB-1572G7.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KB-1572G7.2-002"; exon_number 3; exon_id "ENSE00001795589.1"; level 2; tag "readthrough_transcript"; havana_gene "OTTHUMG00000186001.1"; havana_transcript "OTTHUMT00000320344.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13351 chr22 HAVANA gene 24000281 24059543 . - . gene_id "ENSG00000272578.1"; transcript_id "ENSG00000272578.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000347.2"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000186353.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13352 chr22 HAVANA transcript 24000281 24035372 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000417194.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-019"; level 2; tag "basic"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000471975.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13353 chr22 HAVANA exon 24032419 24035372 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000417194.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-019"; exon_number 1; exon_id "ENSE00001748689.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000471975.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13354 chr22 HAVANA exon 24025912 24026054 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000417194.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-019"; exon_number 2; exon_id "ENSE00003703459.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000471975.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13355 chr22 HAVANA exon 24000281 24002187 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000417194.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-019"; exon_number 3; exon_id "ENSE00001741155.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000471975.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13356 chr22 HAVANA transcript 24002056 24059482 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000435868.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000347.2-008"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319698.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13357 chr22 HAVANA exon 24059273 24059482 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000435868.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000347.2-008"; exon_number 1; exon_id "ENSE00001616543.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319698.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13358 chr22 HAVANA exon 24057199 24057381 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000435868.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000347.2-008"; exon_number 2; exon_id "ENSE00001659833.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319698.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13359 chr22 HAVANA exon 24056704 24056888 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000435868.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000347.2-008"; exon_number 3; exon_id "ENSE00001787256.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319698.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13360 chr22 HAVANA exon 24056398 24056530 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000435868.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000347.2-008"; exon_number 4; exon_id "ENSE00001597489.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319698.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13361 chr22 HAVANA exon 24002056 24002191 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000435868.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000347.2-008"; exon_number 5; exon_id "ENSE00001786012.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319698.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13362 chr22 HAVANA transcript 24002063 24032678 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000438858.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-011"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319701.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13363 chr22 HAVANA exon 24032419 24032678 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000438858.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-011"; exon_number 1; exon_id "ENSE00001731011.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319701.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13364 chr22 HAVANA exon 24029025 24029182 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000438858.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-011"; exon_number 2; exon_id "ENSE00003702650.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319701.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13365 chr22 HAVANA exon 24002063 24002187 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000438858.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-011"; exon_number 3; exon_id "ENSE00001599284.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319701.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13366 chr22 HAVANA transcript 24020797 24032484 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000458554.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-017"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319707.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13367 chr22 HAVANA exon 24032423 24032484 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000458554.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-017"; exon_number 1; exon_id "ENSE00001774761.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319707.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13368 chr22 HAVANA exon 24025912 24026054 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000458554.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-017"; exon_number 2; exon_id "ENSE00003703459.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319707.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13369 chr22 HAVANA exon 24020797 24021029 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000458554.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-017"; exon_number 3; exon_id "ENSE00001681956.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319707.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13370 chr22 HAVANA transcript 24025912 24030167 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000451919.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-013"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319703.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13371 chr22 HAVANA exon 24029822 24030167 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000451919.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-013"; exon_number 1; exon_id "ENSE00001607533.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319703.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13372 chr22 HAVANA exon 24029018 24029182 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000451919.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-013"; exon_number 2; exon_id "ENSE00003709810.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319703.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13373 chr22 HAVANA exon 24025912 24026054 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000451919.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-013"; exon_number 3; exon_id "ENSE00003703459.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319703.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13374 chr22 HAVANA transcript 24025931 24030006 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000437862.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-014"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319704.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13375 chr22 HAVANA exon 24029822 24030006 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000437862.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-014"; exon_number 1; exon_id "ENSE00001742100.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319704.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13376 chr22 HAVANA exon 24028977 24029182 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000437862.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-014"; exon_number 2; exon_id "ENSE00001734239.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319704.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13377 chr22 HAVANA exon 24025931 24026054 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000437862.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-014"; exon_number 3; exon_id "ENSE00001788220.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319704.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13378 chr22 HAVANA transcript 24042976 24059454 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000432595.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-018"; level 2; tag "non_canonical_genome_sequence_error"; tag "mRNA_start_NF"; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000320343.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13379 chr22 HAVANA exon 24059218 24059454 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000432595.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-018"; exon_number 1; exon_id "ENSE00001771908.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "mRNA_start_NF"; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000320343.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13380 chr22 HAVANA exon 24051973 24052054 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000432595.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-018"; exon_number 2; exon_id "ENSE00003711336.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "mRNA_start_NF"; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000320343.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13381 chr22 HAVANA exon 24051317 24051428 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000432595.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-018"; exon_number 3; exon_id "ENSE00003708085.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "mRNA_start_NF"; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000320343.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13382 chr22 HAVANA exon 24047616 24047728 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000432595.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-018"; exon_number 4; exon_id "ENSE00003706589.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "mRNA_start_NF"; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000320343.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13383 chr22 HAVANA exon 24042976 24043032 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000432595.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-018"; exon_number 5; exon_id "ENSE00001718408.1"; level 2; tag "non_canonical_genome_sequence_error"; tag "mRNA_start_NF"; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000320343.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13384 chr22 HAVANA transcript 24052028 24059514 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000444220.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-020"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000473096.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13385 chr22 HAVANA exon 24059218 24059514 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000444220.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-020"; exon_number 1; exon_id "ENSE00001634741.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000473096.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13386 chr22 HAVANA exon 24057196 24057381 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000444220.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-020"; exon_number 2; exon_id "ENSE00003703434.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000473096.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13387 chr22 HAVANA exon 24056374 24056481 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000444220.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-020"; exon_number 3; exon_id "ENSE00001716728.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000473096.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13388 chr22 HAVANA exon 24052028 24052054 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000444220.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-020"; exon_number 4; exon_id "ENSE00001670604.2"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000473096.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13389 chr22 HAVANA transcript 24056373 24059543 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000437294.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-009"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13390 chr22 HAVANA exon 24059295 24059543 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000437294.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-009"; exon_number 1; exon_id "ENSE00001675924.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13391 chr22 HAVANA exon 24057196 24057346 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000437294.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-009"; exon_number 2; exon_id "ENSE00001734236.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13392 chr22 HAVANA exon 24056373 24056529 . - . gene_id "ENSG00000272578.1"; transcript_id "ENST00000437294.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000347.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000347.2-009"; exon_number 3; exon_id "ENSE00001655119.1"; level 2; havana_gene "OTTHUMG00000186353.2"; havana_transcript "OTTHUMT00000319699.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13393 chr22 HAVANA gene 24030323 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENSG00000159496.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4"; level 1; havana_gene "OTTHUMG00000150711.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13394 chr22 HAVANA transcript 24030323 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13395 chr22 HAVANA exon 24030323 24030492 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 1; exon_id "ENSE00001642402.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13396 chr22 HAVANA exon 24030909 24031089 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 2; exon_id "ENSE00001768882.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13397 chr22 HAVANA exon 24032961 24034396 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 3; exon_id "ENSE00001614288.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13398 chr22 HAVANA CDS 24034218 24034396 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 3; exon_id "ENSE00001614288.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13399 chr22 HAVANA start_codon 24034218 24034220 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 3; exon_id "ENSE00001614288.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13400 chr22 HAVANA exon 24034522 24034715 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 4; exon_id "ENSE00003491804.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13401 chr22 HAVANA CDS 24034522 24034715 . + 1 gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 4; exon_id "ENSE00003491804.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13402 chr22 HAVANA exon 24034856 24035178 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 5; exon_id "ENSE00003670665.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13403 chr22 HAVANA CDS 24034856 24035178 . + 2 gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 5; exon_id "ENSE00003670665.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13404 chr22 HAVANA exon 24035946 24036161 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 6; exon_id "ENSE00003601906.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13405 chr22 HAVANA CDS 24035946 24036161 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 6; exon_id "ENSE00003601906.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13406 chr22 HAVANA exon 24036534 24036637 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 7; exon_id "ENSE00003631118.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13407 chr22 HAVANA CDS 24036534 24036637 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 7; exon_id "ENSE00003631118.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13408 chr22 HAVANA exon 24037137 24037206 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 8; exon_id "ENSE00003580498.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13409 chr22 HAVANA CDS 24037137 24037206 . + 1 gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 8; exon_id "ENSE00003580498.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13410 chr22 HAVANA exon 24038515 24038681 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 9; exon_id "ENSE00001493506.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13411 chr22 HAVANA CDS 24038515 24038681 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 9; exon_id "ENSE00001493506.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13412 chr22 HAVANA exon 24038801 24038875 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 10; exon_id "ENSE00003585814.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13413 chr22 HAVANA CDS 24038801 24038852 . + 1 gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 10; exon_id "ENSE00003585814.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13414 chr22 HAVANA stop_codon 24038853 24038855 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 10; exon_id "ENSE00003585814.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13415 chr22 HAVANA exon 24039358 24039432 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 11; exon_id "ENSE00003596195.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13416 chr22 HAVANA exon 24040025 24040048 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 12; exon_id "ENSE00003605552.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13417 chr22 HAVANA exon 24040399 24040520 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 13; exon_id "ENSE00003574694.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13418 chr22 HAVANA exon 24040742 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; exon_number 14; exon_id "ENSE00001675351.1"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13419 chr22 HAVANA UTR 24030323 24030492 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13420 chr22 HAVANA UTR 24030909 24031089 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13421 chr22 HAVANA UTR 24032961 24034217 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13422 chr22 HAVANA UTR 24038853 24038875 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13423 chr22 HAVANA UTR 24039358 24039432 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13424 chr22 HAVANA UTR 24040025 24040048 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13425 chr22 HAVANA UTR 24040399 24040520 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13426 chr22 HAVANA UTR 24040742 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000441897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RGL4-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319710.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13427 chr22 HAVANA transcript 24030329 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13428 chr22 HAVANA exon 24030329 24031038 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 1; exon_id "ENSE00001552985.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13429 chr22 HAVANA exon 24032961 24033134 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 2; exon_id "ENSE00001550504.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13430 chr22 HAVANA exon 24034522 24034715 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 3; exon_id "ENSE00003536629.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13431 chr22 HAVANA exon 24034856 24035178 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 4; exon_id "ENSE00003598843.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13432 chr22 HAVANA CDS 24034891 24035178 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 4; exon_id "ENSE00003598843.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13433 chr22 HAVANA start_codon 24034891 24034893 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 4; exon_id "ENSE00003598843.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13434 chr22 HAVANA exon 24035946 24036161 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 5; exon_id "ENSE00003601906.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13435 chr22 HAVANA CDS 24035946 24036161 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 5; exon_id "ENSE00003601906.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13436 chr22 HAVANA exon 24036534 24036637 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 6; exon_id "ENSE00003631118.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13437 chr22 HAVANA CDS 24036534 24036637 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 6; exon_id "ENSE00003631118.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13438 chr22 HAVANA exon 24037137 24037206 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 7; exon_id "ENSE00003580498.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13439 chr22 HAVANA CDS 24037137 24037206 . + 1 gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 7; exon_id "ENSE00003580498.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13440 chr22 HAVANA exon 24038801 24038875 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 8; exon_id "ENSE00003609268.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13441 chr22 HAVANA CDS 24038801 24038875 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 8; exon_id "ENSE00003609268.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13442 chr22 HAVANA exon 24039358 24039432 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 9; exon_id "ENSE00003555602.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13443 chr22 HAVANA CDS 24039358 24039432 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 9; exon_id "ENSE00003555602.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13444 chr22 HAVANA exon 24040025 24040048 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 10; exon_id "ENSE00003461694.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13445 chr22 HAVANA CDS 24040025 24040048 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 10; exon_id "ENSE00003461694.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13446 chr22 HAVANA exon 24040399 24040520 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 11; exon_id "ENSE00003667662.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13447 chr22 HAVANA CDS 24040399 24040520 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 11; exon_id "ENSE00003667662.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13448 chr22 HAVANA exon 24041031 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 12; exon_id "ENSE00003654764.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13449 chr22 HAVANA CDS 24041031 24041067 . + 1 gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 12; exon_id "ENSE00003654764.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13450 chr22 HAVANA stop_codon 24041068 24041070 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; exon_number 12; exon_id "ENSE00003654764.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13451 chr22 HAVANA UTR 24030329 24031038 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13452 chr22 HAVANA UTR 24032961 24033134 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13453 chr22 HAVANA UTR 24034522 24034715 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13454 chr22 HAVANA UTR 24034856 24034890 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13455 chr22 HAVANA UTR 24041068 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000401461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-003"; level 1; tag "not_organism_supported"; tag "basic"; tag "appris_candidate"; tag "exp_conf"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319712.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13456 chr22 HAVANA transcript 24033048 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13457 chr22 HAVANA exon 24033048 24034396 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 1; exon_id "ENSE00002305444.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13458 chr22 HAVANA CDS 24034218 24034396 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 1; exon_id "ENSE00002305444.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13459 chr22 HAVANA start_codon 24034218 24034220 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 1; exon_id "ENSE00002305444.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13460 chr22 HAVANA exon 24034522 24034715 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 2; exon_id "ENSE00003491804.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13461 chr22 HAVANA CDS 24034522 24034715 . + 1 gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 2; exon_id "ENSE00003491804.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13462 chr22 HAVANA exon 24034856 24035178 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 3; exon_id "ENSE00003670665.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13463 chr22 HAVANA CDS 24034856 24035178 . + 2 gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 3; exon_id "ENSE00003670665.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13464 chr22 HAVANA exon 24035946 24036161 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 4; exon_id "ENSE00003601906.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13465 chr22 HAVANA CDS 24035946 24036161 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 4; exon_id "ENSE00003601906.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13466 chr22 HAVANA exon 24036534 24036637 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 5; exon_id "ENSE00003631118.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13467 chr22 HAVANA CDS 24036534 24036637 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 5; exon_id "ENSE00003631118.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13468 chr22 HAVANA exon 24037137 24037206 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 6; exon_id "ENSE00003580498.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13469 chr22 HAVANA CDS 24037137 24037206 . + 1 gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 6; exon_id "ENSE00003580498.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13470 chr22 HAVANA exon 24038801 24038875 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 7; exon_id "ENSE00003609268.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13471 chr22 HAVANA CDS 24038801 24038875 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 7; exon_id "ENSE00003609268.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13472 chr22 HAVANA exon 24039358 24039432 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 8; exon_id "ENSE00003555602.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13473 chr22 HAVANA CDS 24039358 24039432 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 8; exon_id "ENSE00003555602.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13474 chr22 HAVANA exon 24040025 24040048 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 9; exon_id "ENSE00003461694.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13475 chr22 HAVANA CDS 24040025 24040048 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 9; exon_id "ENSE00003461694.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13476 chr22 HAVANA exon 24040399 24040520 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 10; exon_id "ENSE00003667662.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13477 chr22 HAVANA CDS 24040399 24040520 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 10; exon_id "ENSE00003667662.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13478 chr22 HAVANA exon 24041031 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 11; exon_id "ENSE00003654764.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13479 chr22 HAVANA CDS 24041031 24041067 . + 1 gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 11; exon_id "ENSE00003654764.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13480 chr22 HAVANA stop_codon 24041068 24041070 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; exon_number 11; exon_id "ENSE00003654764.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13481 chr22 HAVANA UTR 24033048 24034217 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13482 chr22 HAVANA UTR 24041068 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000290691.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RGL4-002"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13811.1"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319711.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13483 chr22 HAVANA transcript 24033493 24041165 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000460003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-004"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319713.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13484 chr22 HAVANA exon 24033493 24034715 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000460003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-004"; exon_number 1; exon_id "ENSE00001816682.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319713.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13485 chr22 HAVANA exon 24034856 24035178 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000460003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-004"; exon_number 2; exon_id "ENSE00003549312.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319713.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13486 chr22 HAVANA exon 24035946 24036161 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000460003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-004"; exon_number 3; exon_id "ENSE00003656231.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319713.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13487 chr22 HAVANA exon 24036534 24036637 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000460003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-004"; exon_number 4; exon_id "ENSE00003467489.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319713.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13488 chr22 HAVANA exon 24037137 24037206 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000460003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-004"; exon_number 5; exon_id "ENSE00003552860.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319713.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13489 chr22 HAVANA exon 24038801 24038875 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000460003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-004"; exon_number 6; exon_id "ENSE00003612424.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319713.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13490 chr22 HAVANA exon 24039358 24039432 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000460003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-004"; exon_number 7; exon_id "ENSE00003596195.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319713.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13491 chr22 HAVANA exon 24040025 24040048 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000460003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-004"; exon_number 8; exon_id "ENSE00003605552.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319713.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13492 chr22 HAVANA exon 24040399 24040520 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000460003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-004"; exon_number 9; exon_id "ENSE00003574694.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319713.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13493 chr22 HAVANA exon 24040742 24041165 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000460003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-004"; exon_number 10; exon_id "ENSE00001837918.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319713.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13494 chr22 HAVANA transcript 24033493 24041165 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13495 chr22 HAVANA exon 24033493 24034396 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 1; exon_id "ENSE00001790133.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13496 chr22 HAVANA CDS 24034218 24034396 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 1; exon_id "ENSE00001790133.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13497 chr22 HAVANA start_codon 24034218 24034220 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 1; exon_id "ENSE00001790133.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13498 chr22 HAVANA exon 24034522 24034715 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 2; exon_id "ENSE00003491804.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13499 chr22 HAVANA CDS 24034522 24034715 . + 1 gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 2; exon_id "ENSE00003491804.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13500 chr22 HAVANA exon 24034856 24035178 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 3; exon_id "ENSE00003670665.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13501 chr22 HAVANA CDS 24034856 24035178 . + 2 gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 3; exon_id "ENSE00003670665.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13502 chr22 HAVANA exon 24035946 24036161 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 4; exon_id "ENSE00003601906.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13503 chr22 HAVANA CDS 24035946 24036161 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 4; exon_id "ENSE00003601906.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13504 chr22 HAVANA exon 24036534 24036637 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 5; exon_id "ENSE00003631118.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13505 chr22 HAVANA CDS 24036534 24036637 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 5; exon_id "ENSE00003631118.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13506 chr22 HAVANA exon 24037137 24037206 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 6; exon_id "ENSE00003580498.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13507 chr22 HAVANA CDS 24037137 24037206 . + 1 gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 6; exon_id "ENSE00003580498.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13508 chr22 HAVANA exon 24038801 24038875 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 7; exon_id "ENSE00003609268.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13509 chr22 HAVANA CDS 24038801 24038875 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 7; exon_id "ENSE00003609268.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13510 chr22 HAVANA exon 24039358 24039432 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 8; exon_id "ENSE00003555602.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13511 chr22 HAVANA CDS 24039358 24039432 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 8; exon_id "ENSE00003555602.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13512 chr22 HAVANA exon 24040025 24040048 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 9; exon_id "ENSE00003461694.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13513 chr22 HAVANA CDS 24040025 24040048 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 9; exon_id "ENSE00003461694.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13514 chr22 HAVANA exon 24040399 24040520 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 10; exon_id "ENSE00003667662.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13515 chr22 HAVANA CDS 24040399 24040520 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 10; exon_id "ENSE00003667662.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13516 chr22 HAVANA exon 24040742 24040832 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 11; exon_id "ENSE00001493484.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13517 chr22 HAVANA CDS 24040742 24040832 . + 1 gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 11; exon_id "ENSE00001493484.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13518 chr22 HAVANA exon 24041031 24041165 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 12; exon_id "ENSE00001783599.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13519 chr22 HAVANA CDS 24041031 24041165 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; exon_number 12; exon_id "ENSE00001783599.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13520 chr22 HAVANA UTR 24033493 24034217 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000423392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RGL4-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319715.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13521 chr22 HAVANA transcript 24033493 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000467354.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-005"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319714.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13522 chr22 HAVANA exon 24033493 24034715 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000467354.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-005"; exon_number 1; exon_id "ENSE00001816682.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319714.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13523 chr22 HAVANA exon 24034856 24035178 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000467354.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-005"; exon_number 2; exon_id "ENSE00003549312.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319714.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13524 chr22 HAVANA exon 24035946 24036161 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000467354.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-005"; exon_number 3; exon_id "ENSE00003656231.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319714.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13525 chr22 HAVANA exon 24036534 24036637 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000467354.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-005"; exon_number 4; exon_id "ENSE00003467489.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319714.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13526 chr22 HAVANA exon 24037137 24037206 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000467354.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-005"; exon_number 5; exon_id "ENSE00003552860.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319714.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13527 chr22 HAVANA exon 24038801 24038875 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000467354.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-005"; exon_number 6; exon_id "ENSE00003612424.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319714.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13528 chr22 HAVANA exon 24039358 24039432 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000467354.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-005"; exon_number 7; exon_id "ENSE00003596195.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319714.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13529 chr22 HAVANA exon 24040025 24040048 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000467354.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-005"; exon_number 8; exon_id "ENSE00003605552.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319714.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13530 chr22 HAVANA exon 24040399 24040520 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000467354.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-005"; exon_number 9; exon_id "ENSE00003574694.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319714.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13531 chr22 HAVANA exon 24040602 24040735 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000467354.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-005"; exon_number 10; exon_id "ENSE00001886635.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319714.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13532 chr22 HAVANA exon 24041031 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000467354.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RGL4-005"; exon_number 11; exon_id "ENSE00003596996.1"; level 2; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000319714.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13533 chr22 HAVANA transcript 24038671 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000452208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RGL4-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320345.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13534 chr22 HAVANA exon 24038671 24038875 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000452208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RGL4-007"; exon_number 1; exon_id "ENSE00001687739.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320345.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13535 chr22 HAVANA CDS 24038671 24038875 . + 1 gene_id "ENSG00000159496.10"; transcript_id "ENST00000452208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RGL4-007"; exon_number 1; exon_id "ENSE00001687739.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320345.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13536 chr22 HAVANA exon 24039358 24039432 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000452208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RGL4-007"; exon_number 2; exon_id "ENSE00003555602.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320345.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13537 chr22 HAVANA CDS 24039358 24039432 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000452208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RGL4-007"; exon_number 2; exon_id "ENSE00003555602.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320345.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13538 chr22 HAVANA exon 24040025 24040048 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000452208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RGL4-007"; exon_number 3; exon_id "ENSE00003461694.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320345.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13539 chr22 HAVANA CDS 24040025 24040048 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000452208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RGL4-007"; exon_number 3; exon_id "ENSE00003461694.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320345.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13540 chr22 HAVANA exon 24040399 24040520 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000452208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RGL4-007"; exon_number 4; exon_id "ENSE00003667662.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320345.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13541 chr22 HAVANA CDS 24040399 24040520 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000452208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RGL4-007"; exon_number 4; exon_id "ENSE00003667662.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320345.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13542 chr22 HAVANA exon 24041031 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000452208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RGL4-007"; exon_number 5; exon_id "ENSE00003654764.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320345.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13543 chr22 HAVANA CDS 24041031 24041067 . + 1 gene_id "ENSG00000159496.10"; transcript_id "ENST00000452208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RGL4-007"; exon_number 5; exon_id "ENSE00003654764.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320345.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13544 chr22 HAVANA stop_codon 24041068 24041070 . + 0 gene_id "ENSG00000159496.10"; transcript_id "ENST00000452208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RGL4-007"; exon_number 5; exon_id "ENSE00003654764.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320345.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13545 chr22 HAVANA UTR 24041068 24041363 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000452208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RGL4-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320345.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13546 chr22 HAVANA transcript 24040257 24040731 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000460167.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RGL4-008"; level 2; tag "basic"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320346.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13547 chr22 HAVANA exon 24040257 24040520 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000460167.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RGL4-008"; exon_number 1; exon_id "ENSE00001926932.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320346.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13548 chr22 HAVANA exon 24040602 24040731 . + . gene_id "ENSG00000159496.10"; transcript_id "ENST00000460167.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RGL4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RGL4-008"; exon_number 2; exon_id "ENSE00001912558.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150711.2"; havana_transcript "OTTHUMT00000320346.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13549 chr22 HAVANA gene 24080865 24081476 . - . gene_id "ENSG00000270041.1"; transcript_id "ENSG00000270041.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-N27C7.1"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "LL22NC03-N27C7.1"; level 2; havana_gene "OTTHUMG00000184100.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13550 chr22 HAVANA transcript 24080865 24081476 . - . gene_id "ENSG00000270041.1"; transcript_id "ENST00000602816.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-N27C7.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LL22NC03-N27C7.1-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000184100.1"; havana_transcript "OTTHUMT00000468027.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13551 chr22 HAVANA exon 24080865 24081476 . - . gene_id "ENSG00000270041.1"; transcript_id "ENST00000602816.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "LL22NC03-N27C7.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LL22NC03-N27C7.1-001"; exon_number 1; exon_id "ENSE00003258604.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000184100.1"; havana_transcript "OTTHUMT00000468027.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13552 chr22 HAVANA gene 24083769 24093279 . - . gene_id "ENSG00000187792.3"; transcript_id "ENSG00000187792.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF70"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF70"; level 2; havana_gene "OTTHUMG00000150739.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13553 chr22 HAVANA transcript 24083769 24093279 . - . gene_id "ENSG00000187792.3"; transcript_id "ENST00000341976.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF70"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF70-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13812.1"; havana_gene "OTTHUMG00000150739.1"; havana_transcript "OTTHUMT00000319881.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13554 chr22 HAVANA exon 24092898 24093279 . - . gene_id "ENSG00000187792.3"; transcript_id "ENST00000341976.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF70"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF70-001"; exon_number 1; exon_id "ENSE00001400017.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13812.1"; havana_gene "OTTHUMG00000150739.1"; havana_transcript "OTTHUMT00000319881.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13555 chr22 HAVANA exon 24083769 24087406 . - . gene_id "ENSG00000187792.3"; transcript_id "ENST00000341976.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF70"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF70-001"; exon_number 2; exon_id "ENSE00001383235.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13812.1"; havana_gene "OTTHUMG00000150739.1"; havana_transcript "OTTHUMT00000319881.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13556 chr22 HAVANA CDS 24085990 24087327 . - 0 gene_id "ENSG00000187792.3"; transcript_id "ENST00000341976.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF70"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF70-001"; exon_number 2; exon_id "ENSE00001383235.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13812.1"; havana_gene "OTTHUMG00000150739.1"; havana_transcript "OTTHUMT00000319881.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13557 chr22 HAVANA start_codon 24087325 24087327 . - 0 gene_id "ENSG00000187792.3"; transcript_id "ENST00000341976.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF70"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF70-001"; exon_number 2; exon_id "ENSE00001383235.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13812.1"; havana_gene "OTTHUMG00000150739.1"; havana_transcript "OTTHUMT00000319881.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13558 chr22 HAVANA stop_codon 24085987 24085989 . - 0 gene_id "ENSG00000187792.3"; transcript_id "ENST00000341976.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF70"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF70-001"; exon_number 2; exon_id "ENSE00001383235.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13812.1"; havana_gene "OTTHUMG00000150739.1"; havana_transcript "OTTHUMT00000319881.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13559 chr22 HAVANA UTR 24092898 24093279 . - . gene_id "ENSG00000187792.3"; transcript_id "ENST00000341976.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF70"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF70-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13812.1"; havana_gene "OTTHUMG00000150739.1"; havana_transcript "OTTHUMT00000319881.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13560 chr22 HAVANA UTR 24083769 24085989 . - . gene_id "ENSG00000187792.3"; transcript_id "ENST00000341976.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF70"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF70-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13812.1"; havana_gene "OTTHUMG00000150739.1"; havana_transcript "OTTHUMT00000319881.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13561 chr22 HAVANA UTR 24087328 24087406 . - . gene_id "ENSG00000187792.3"; transcript_id "ENST00000341976.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF70"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF70-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13812.1"; havana_gene "OTTHUMG00000150739.1"; havana_transcript "OTTHUMT00000319881.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13562 chr22 HAVANA gene 24094930 24096655 . - . gene_id "ENSG00000128218.7"; transcript_id "ENSG00000128218.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB3"; level 1; havana_gene "OTTHUMG00000150738.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13563 chr22 HAVANA transcript 24094930 24096596 . - . gene_id "ENSG00000128218.7"; transcript_id "ENST00000398465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB3-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319880.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13564 chr22 HAVANA exon 24096502 24096596 . - . gene_id "ENSG00000128218.7"; transcript_id "ENST00000398465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB3-002"; exon_number 1; exon_id "ENSE00001856314.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319880.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13565 chr22 HAVANA CDS 24096502 24096550 . - 0 gene_id "ENSG00000128218.7"; transcript_id "ENST00000398465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB3-002"; exon_number 1; exon_id "ENSE00001856314.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319880.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13566 chr22 HAVANA start_codon 24096548 24096550 . - 0 gene_id "ENSG00000128218.7"; transcript_id "ENST00000398465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB3-002"; exon_number 1; exon_id "ENSE00001856314.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319880.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13567 chr22 HAVANA exon 24094930 24095337 . - . gene_id "ENSG00000128218.7"; transcript_id "ENST00000398465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB3-002"; exon_number 2; exon_id "ENSE00001547172.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319880.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13568 chr22 HAVANA CDS 24095066 24095337 . - 2 gene_id "ENSG00000128218.7"; transcript_id "ENST00000398465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB3-002"; exon_number 2; exon_id "ENSE00001547172.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319880.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13569 chr22 HAVANA stop_codon 24095063 24095065 . - 0 gene_id "ENSG00000128218.7"; transcript_id "ENST00000398465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB3-002"; exon_number 2; exon_id "ENSE00001547172.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319880.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13570 chr22 HAVANA UTR 24096551 24096596 . - . gene_id "ENSG00000128218.7"; transcript_id "ENST00000398465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB3-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319880.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13571 chr22 HAVANA UTR 24094930 24095065 . - . gene_id "ENSG00000128218.7"; transcript_id "ENST00000398465.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "VPREB3-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319880.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13572 chr22 HAVANA transcript 24094930 24096655 . - . gene_id "ENSG00000128218.7"; transcript_id "ENST00000248948.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13813.1"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319879.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13573 chr22 HAVANA exon 24096502 24096655 . - . gene_id "ENSG00000128218.7"; transcript_id "ENST00000248948.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB3-001"; exon_number 1; exon_id "ENSE00001153626.6"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13813.1"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319879.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13574 chr22 HAVANA CDS 24096502 24096550 . - 0 gene_id "ENSG00000128218.7"; transcript_id "ENST00000248948.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB3-001"; exon_number 1; exon_id "ENSE00001153626.6"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13813.1"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319879.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13575 chr22 HAVANA start_codon 24096548 24096550 . - 0 gene_id "ENSG00000128218.7"; transcript_id "ENST00000248948.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB3-001"; exon_number 1; exon_id "ENSE00001153626.6"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13813.1"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319879.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13576 chr22 HAVANA exon 24094930 24095385 . - . gene_id "ENSG00000128218.7"; transcript_id "ENST00000248948.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB3-001"; exon_number 2; exon_id "ENSE00001952800.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13813.1"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319879.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13577 chr22 HAVANA CDS 24095066 24095385 . - 2 gene_id "ENSG00000128218.7"; transcript_id "ENST00000248948.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB3-001"; exon_number 2; exon_id "ENSE00001952800.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13813.1"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319879.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13578 chr22 HAVANA stop_codon 24095063 24095065 . - 0 gene_id "ENSG00000128218.7"; transcript_id "ENST00000248948.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB3-001"; exon_number 2; exon_id "ENSE00001952800.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13813.1"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319879.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13579 chr22 HAVANA UTR 24096551 24096655 . - . gene_id "ENSG00000128218.7"; transcript_id "ENST00000248948.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13813.1"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319879.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13580 chr22 HAVANA UTR 24094930 24095065 . - . gene_id "ENSG00000128218.7"; transcript_id "ENST00000248948.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "VPREB3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "VPREB3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13813.1"; havana_gene "OTTHUMG00000150738.2"; havana_transcript "OTTHUMT00000319879.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13581 chr22 HAVANA gene 24105208 24108048 . + . gene_id "ENSG00000169314.10"; transcript_id "ENSG00000169314.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15"; level 2; havana_gene "OTTHUMG00000150740.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13582 chr22 HAVANA transcript 24105208 24106550 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000498542.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C22orf15-005"; level 2; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319888.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13583 chr22 HAVANA exon 24105208 24105518 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000498542.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C22orf15-005"; exon_number 1; exon_id "ENSE00002696870.1"; level 2; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319888.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13584 chr22 HAVANA exon 24106274 24106550 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000498542.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C22orf15-005"; exon_number 2; exon_id "ENSE00001905091.1"; level 2; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319888.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13585 chr22 HAVANA transcript 24105208 24108048 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000477921.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C22orf15-002"; level 2; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319885.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13586 chr22 HAVANA exon 24105208 24105518 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000477921.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C22orf15-002"; exon_number 1; exon_id "ENSE00002696870.1"; level 2; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319885.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13587 chr22 HAVANA exon 24106274 24106360 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000477921.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C22orf15-002"; exon_number 2; exon_id "ENSE00003656440.1"; level 2; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319885.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13588 chr22 HAVANA exon 24106426 24108048 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000477921.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C22orf15-002"; exon_number 3; exon_id "ENSE00001929437.1"; level 2; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319885.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13589 chr22 HAVANA transcript 24105241 24108048 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13590 chr22 HAVANA exon 24105241 24105518 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; exon_number 1; exon_id "ENSE00001843329.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13591 chr22 HAVANA CDS 24105494 24105518 . + 0 gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; exon_number 1; exon_id "ENSE00001843329.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13592 chr22 HAVANA start_codon 24105494 24105496 . + 0 gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; exon_number 1; exon_id "ENSE00001843329.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13593 chr22 HAVANA exon 24106274 24106360 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; exon_number 2; exon_id "ENSE00003670968.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13594 chr22 HAVANA CDS 24106274 24106360 . + 2 gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; exon_number 2; exon_id "ENSE00003670968.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13595 chr22 HAVANA exon 24106447 24106584 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; exon_number 3; exon_id "ENSE00001153579.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13596 chr22 HAVANA CDS 24106447 24106584 . + 2 gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; exon_number 3; exon_id "ENSE00001153579.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13597 chr22 HAVANA exon 24106826 24106900 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; exon_number 4; exon_id "ENSE00003517106.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13598 chr22 HAVANA CDS 24106826 24106900 . + 2 gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; exon_number 4; exon_id "ENSE00003517106.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13599 chr22 HAVANA exon 24106980 24107089 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; exon_number 5; exon_id "ENSE00003606373.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13600 chr22 HAVANA CDS 24106980 24107089 . + 2 gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; exon_number 5; exon_id "ENSE00003606373.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13601 chr22 HAVANA exon 24107908 24108048 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; exon_number 6; exon_id "ENSE00003498479.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13602 chr22 HAVANA CDS 24107908 24107916 . + 0 gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; exon_number 6; exon_id "ENSE00003498479.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13603 chr22 HAVANA stop_codon 24107917 24107919 . + 0 gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; exon_number 6; exon_id "ENSE00003498479.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13604 chr22 HAVANA UTR 24105241 24105493 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13605 chr22 HAVANA UTR 24107917 24108048 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000402217.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-004"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13814.2"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319887.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13606 chr22 HAVANA transcript 24105394 24108048 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13607 chr22 HAVANA exon 24105394 24105518 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; exon_number 1; exon_id "ENSE00001864421.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13608 chr22 HAVANA CDS 24105494 24105518 . + 0 gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; exon_number 1; exon_id "ENSE00001864421.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13609 chr22 HAVANA start_codon 24105494 24105496 . + 0 gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; exon_number 1; exon_id "ENSE00001864421.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13610 chr22 HAVANA exon 24106274 24106360 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; exon_number 2; exon_id "ENSE00003670968.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13611 chr22 HAVANA CDS 24106274 24106360 . + 2 gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; exon_number 2; exon_id "ENSE00003670968.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13612 chr22 HAVANA exon 24106447 24106589 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; exon_number 3; exon_id "ENSE00001557641.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13613 chr22 HAVANA CDS 24106447 24106589 . + 2 gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; exon_number 3; exon_id "ENSE00001557641.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13614 chr22 HAVANA exon 24106826 24106900 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; exon_number 4; exon_id "ENSE00003536906.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13615 chr22 HAVANA CDS 24106826 24106900 . + 0 gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; exon_number 4; exon_id "ENSE00003536906.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13616 chr22 HAVANA exon 24106980 24107089 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; exon_number 5; exon_id "ENSE00003578980.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13617 chr22 HAVANA CDS 24106980 24107089 . + 0 gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; exon_number 5; exon_id "ENSE00003578980.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13618 chr22 HAVANA exon 24107908 24108048 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; exon_number 6; exon_id "ENSE00003632057.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13619 chr22 HAVANA CDS 24107908 24107938 . + 1 gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; exon_number 6; exon_id "ENSE00003632057.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13620 chr22 HAVANA stop_codon 24107939 24107941 . + 0 gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; exon_number 6; exon_id "ENSE00003632057.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13621 chr22 HAVANA UTR 24105394 24105493 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13622 chr22 HAVANA UTR 24107939 24108048 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000305199.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C22orf15-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319886.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13623 chr22 HAVANA transcript 24105410 24108048 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13624 chr22 HAVANA exon 24105410 24105518 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; exon_number 1; exon_id "ENSE00001361632.4"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13625 chr22 HAVANA CDS 24105494 24105518 . + 0 gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; exon_number 1; exon_id "ENSE00001361632.4"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13626 chr22 HAVANA start_codon 24105494 24105496 . + 0 gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; exon_number 1; exon_id "ENSE00001361632.4"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13627 chr22 HAVANA exon 24106274 24106360 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; exon_number 2; exon_id "ENSE00003670968.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13628 chr22 HAVANA CDS 24106274 24106360 . + 2 gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; exon_number 2; exon_id "ENSE00003670968.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13629 chr22 HAVANA exon 24106447 24106599 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; exon_number 3; exon_id "ENSE00001493456.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13630 chr22 HAVANA CDS 24106447 24106599 . + 2 gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; exon_number 3; exon_id "ENSE00001493456.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13631 chr22 HAVANA exon 24106826 24106900 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; exon_number 4; exon_id "ENSE00003517106.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13632 chr22 HAVANA CDS 24106826 24106900 . + 2 gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; exon_number 4; exon_id "ENSE00003517106.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13633 chr22 HAVANA exon 24107564 24107644 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; exon_number 5; exon_id "ENSE00001493455.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13634 chr22 HAVANA CDS 24107564 24107644 . + 2 gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; exon_number 5; exon_id "ENSE00001493455.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13635 chr22 HAVANA exon 24107908 24108048 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; exon_number 6; exon_id "ENSE00003651543.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13636 chr22 HAVANA CDS 24107908 24107912 . + 2 gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; exon_number 6; exon_id "ENSE00003651543.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13637 chr22 HAVANA stop_codon 24107913 24107915 . + 0 gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; exon_number 6; exon_id "ENSE00003651543.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13638 chr22 HAVANA UTR 24105410 24105493 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13639 chr22 HAVANA UTR 24107913 24108048 . + . gene_id "ENSG00000169314.10"; transcript_id "ENST00000382821.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C22orf15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C22orf15-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150740.2"; havana_transcript "OTTHUMT00000319884.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13640 chr22 HAVANA gene 24108021 24110630 . - . gene_id "ENSG00000250479.4"; transcript_id "ENSG00000250479.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHCHD10"; level 1; havana_gene "OTTHUMG00000150736.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13641 chr22 HAVANA transcript 24108021 24110063 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000520222.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CHCHD10-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13642 chr22 HAVANA exon 24110021 24110063 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000520222.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CHCHD10-005"; exon_number 1; exon_id "ENSE00002130985.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13643 chr22 HAVANA CDS 24110021 24110061 . - 0 gene_id "ENSG00000250479.4"; transcript_id "ENST00000520222.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CHCHD10-005"; exon_number 1; exon_id "ENSE00002130985.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13644 chr22 HAVANA start_codon 24110059 24110061 . - 0 gene_id "ENSG00000250479.4"; transcript_id "ENST00000520222.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CHCHD10-005"; exon_number 1; exon_id "ENSE00002130985.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13645 chr22 HAVANA exon 24108315 24108462 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000520222.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CHCHD10-005"; exon_number 2; exon_id "ENSE00003616022.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13646 chr22 HAVANA CDS 24108339 24108462 . - 1 gene_id "ENSG00000250479.4"; transcript_id "ENST00000520222.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CHCHD10-005"; exon_number 2; exon_id "ENSE00003616022.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13647 chr22 HAVANA stop_codon 24108336 24108338 . - 0 gene_id "ENSG00000250479.4"; transcript_id "ENST00000520222.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CHCHD10-005"; exon_number 2; exon_id "ENSE00003616022.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13648 chr22 HAVANA exon 24108021 24108213 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000520222.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CHCHD10-005"; exon_number 3; exon_id "ENSE00003637987.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13649 chr22 HAVANA UTR 24110062 24110063 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000520222.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CHCHD10-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13650 chr22 HAVANA UTR 24108315 24108338 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000520222.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CHCHD10-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13651 chr22 HAVANA UTR 24108021 24108213 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000520222.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CHCHD10-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381505.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13652 chr22 HAVANA transcript 24108021 24110129 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000401675.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CHCHD10-002"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319871.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13653 chr22 HAVANA exon 24110021 24110129 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000401675.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CHCHD10-002"; exon_number 1; exon_id "ENSE00001923706.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319871.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13654 chr22 HAVANA CDS 24110021 24110061 . - 0 gene_id "ENSG00000250479.4"; transcript_id "ENST00000401675.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CHCHD10-002"; exon_number 1; exon_id "ENSE00001923706.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319871.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13655 chr22 HAVANA start_codon 24110059 24110061 . - 0 gene_id "ENSG00000250479.4"; transcript_id "ENST00000401675.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CHCHD10-002"; exon_number 1; exon_id "ENSE00001923706.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319871.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13656 chr22 HAVANA exon 24109561 24109780 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000401675.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CHCHD10-002"; exon_number 2; exon_id "ENSE00002064421.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319871.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13657 chr22 HAVANA CDS 24109561 24109780 . - 1 gene_id "ENSG00000250479.4"; transcript_id "ENST00000401675.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CHCHD10-002"; exon_number 2; exon_id "ENSE00002064421.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319871.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13658 chr22 HAVANA exon 24108315 24108483 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000401675.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CHCHD10-002"; exon_number 3; exon_id "ENSE00001564474.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319871.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13659 chr22 HAVANA CDS 24108315 24108483 . - 0 gene_id "ENSG00000250479.4"; transcript_id "ENST00000401675.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CHCHD10-002"; exon_number 3; exon_id "ENSE00001564474.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319871.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13660 chr22 HAVANA exon 24108021 24108213 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000401675.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CHCHD10-002"; exon_number 4; exon_id "ENSE00003469959.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319871.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13661 chr22 HAVANA CDS 24108197 24108213 . - 2 gene_id "ENSG00000250479.4"; transcript_id "ENST00000401675.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CHCHD10-002"; exon_number 4; exon_id "ENSE00003469959.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319871.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13662 chr22 HAVANA stop_codon 24108194 24108196 . - 0 gene_id "ENSG00000250479.4"; transcript_id "ENST00000401675.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CHCHD10-002"; exon_number 4; exon_id "ENSE00003469959.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319871.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13663 chr22 HAVANA UTR 24110062 24110129 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000401675.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CHCHD10-002"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319871.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13664 chr22 HAVANA UTR 24108021 24108196 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000401675.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CHCHD10-002"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319871.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13665 chr22 HAVANA transcript 24108021 24110630 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000484558.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHCHD10-001"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13815.1"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319870.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13666 chr22 HAVANA exon 24110021 24110630 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000484558.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHCHD10-001"; exon_number 1; exon_id "ENSE00002091168.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13815.1"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319870.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13667 chr22 HAVANA CDS 24110021 24110061 . - 0 gene_id "ENSG00000250479.4"; transcript_id "ENST00000484558.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHCHD10-001"; exon_number 1; exon_id "ENSE00002091168.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13815.1"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319870.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13668 chr22 HAVANA start_codon 24110059 24110061 . - 0 gene_id "ENSG00000250479.4"; transcript_id "ENST00000484558.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHCHD10-001"; exon_number 1; exon_id "ENSE00002091168.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13815.1"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319870.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13669 chr22 HAVANA exon 24109561 24109780 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000484558.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHCHD10-001"; exon_number 2; exon_id "ENSE00002064421.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13815.1"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319870.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13670 chr22 HAVANA CDS 24109561 24109780 . - 1 gene_id "ENSG00000250479.4"; transcript_id "ENST00000484558.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHCHD10-001"; exon_number 2; exon_id "ENSE00002064421.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13815.1"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319870.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13671 chr22 HAVANA exon 24108315 24108462 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000484558.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHCHD10-001"; exon_number 3; exon_id "ENSE00003567448.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13815.1"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319870.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13672 chr22 HAVANA CDS 24108315 24108462 . - 0 gene_id "ENSG00000250479.4"; transcript_id "ENST00000484558.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHCHD10-001"; exon_number 3; exon_id "ENSE00003567448.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13815.1"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319870.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13673 chr22 HAVANA exon 24108021 24108213 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000484558.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHCHD10-001"; exon_number 4; exon_id "ENSE00003469959.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13815.1"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319870.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13674 chr22 HAVANA CDS 24108197 24108213 . - 2 gene_id "ENSG00000250479.4"; transcript_id "ENST00000484558.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHCHD10-001"; exon_number 4; exon_id "ENSE00003469959.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13815.1"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319870.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13675 chr22 HAVANA stop_codon 24108194 24108196 . - 0 gene_id "ENSG00000250479.4"; transcript_id "ENST00000484558.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHCHD10-001"; exon_number 4; exon_id "ENSE00003469959.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13815.1"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319870.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13676 chr22 HAVANA UTR 24110062 24110630 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000484558.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHCHD10-001"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13815.1"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319870.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13677 chr22 HAVANA UTR 24108021 24108196 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000484558.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHCHD10-001"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13815.1"; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000319870.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13678 chr22 HAVANA transcript 24108061 24108651 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000523865.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CHCHD10-004"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13679 chr22 HAVANA exon 24108315 24108651 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000523865.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CHCHD10-004"; exon_number 1; exon_id "ENSE00002121577.1"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13680 chr22 HAVANA exon 24108061 24108213 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000523865.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CHCHD10-004"; exon_number 2; exon_id "ENSE00002112246.1"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381507.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13681 chr22 HAVANA transcript 24108122 24110107 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000517886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CHCHD10-003"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381508.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13682 chr22 HAVANA exon 24110021 24110107 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000517886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CHCHD10-003"; exon_number 1; exon_id "ENSE00001866512.2"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381508.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13683 chr22 HAVANA CDS 24110021 24110061 . - 0 gene_id "ENSG00000250479.4"; transcript_id "ENST00000517886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CHCHD10-003"; exon_number 1; exon_id "ENSE00001866512.2"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381508.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13684 chr22 HAVANA start_codon 24110059 24110061 . - 0 gene_id "ENSG00000250479.4"; transcript_id "ENST00000517886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CHCHD10-003"; exon_number 1; exon_id "ENSE00001866512.2"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381508.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13685 chr22 HAVANA exon 24109561 24109727 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000517886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CHCHD10-003"; exon_number 2; exon_id "ENSE00002095741.1"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381508.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13686 chr22 HAVANA CDS 24109561 24109727 . - 1 gene_id "ENSG00000250479.4"; transcript_id "ENST00000517886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CHCHD10-003"; exon_number 2; exon_id "ENSE00002095741.1"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381508.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13687 chr22 HAVANA exon 24108315 24108462 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000517886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CHCHD10-003"; exon_number 3; exon_id "ENSE00003594543.1"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381508.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13688 chr22 HAVANA CDS 24108374 24108462 . - 2 gene_id "ENSG00000250479.4"; transcript_id "ENST00000517886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CHCHD10-003"; exon_number 3; exon_id "ENSE00003594543.1"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381508.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13689 chr22 HAVANA stop_codon 24108371 24108373 . - 0 gene_id "ENSG00000250479.4"; transcript_id "ENST00000517886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CHCHD10-003"; exon_number 3; exon_id "ENSE00003594543.1"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381508.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13690 chr22 HAVANA exon 24108122 24108213 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000517886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CHCHD10-003"; exon_number 4; exon_id "ENSE00002105657.1"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381508.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13691 chr22 HAVANA UTR 24110062 24110107 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000517886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CHCHD10-003"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381508.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13692 chr22 HAVANA UTR 24108315 24108373 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000517886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CHCHD10-003"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381508.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13693 chr22 HAVANA UTR 24108122 24108213 . - . gene_id "ENSG00000250479.4"; transcript_id "ENST00000517886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHCHD10"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CHCHD10-003"; level 2; havana_gene "OTTHUMG00000150736.2"; havana_transcript "OTTHUMT00000381508.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13694 chr22 HAVANA gene 24110413 24126503 . + . gene_id "ENSG00000099953.5"; transcript_id "ENSG00000099953.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11"; level 2; havana_gene "OTTHUMG00000150742.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13695 chr22 HAVANA transcript 24110413 24126503 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000465385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-003"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319893.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13696 chr22 HAVANA exon 24110413 24110980 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000465385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-003"; exon_number 1; exon_id "ENSE00001906568.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319893.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13697 chr22 HAVANA exon 24113305 24113486 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000465385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-003"; exon_number 2; exon_id "ENSE00001873703.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319893.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13698 chr22 HAVANA exon 24121374 24122689 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000465385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-003"; exon_number 3; exon_id "ENSE00001891874.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319893.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13699 chr22 HAVANA exon 24122769 24122902 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000465385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-003"; exon_number 4; exon_id "ENSE00003615433.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319893.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13700 chr22 HAVANA exon 24123046 24123287 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000465385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-003"; exon_number 5; exon_id "ENSE00003497173.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319893.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13701 chr22 HAVANA exon 24123380 24123596 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000465385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-003"; exon_number 6; exon_id "ENSE00003672048.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319893.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13702 chr22 HAVANA exon 24124413 24124670 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000465385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-003"; exon_number 7; exon_id "ENSE00003566453.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319893.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13703 chr22 HAVANA exon 24125598 24126503 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000465385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-003"; exon_number 8; exon_id "ENSE00003622713.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319893.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13704 chr22 HAVANA transcript 24110830 24123194 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000477567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319895.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13705 chr22 HAVANA exon 24110830 24110980 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000477567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-005"; exon_number 1; exon_id "ENSE00001909808.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319895.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13706 chr22 HAVANA exon 24113374 24113494 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000477567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-005"; exon_number 2; exon_id "ENSE00001888175.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319895.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13707 chr22 HAVANA exon 24121374 24121603 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000477567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-005"; exon_number 3; exon_id "ENSE00003535862.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319895.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13708 chr22 HAVANA exon 24122546 24122689 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000477567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-005"; exon_number 4; exon_id "ENSE00003496658.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319895.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13709 chr22 HAVANA exon 24122769 24122902 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000477567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-005"; exon_number 5; exon_id "ENSE00003615433.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319895.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13710 chr22 HAVANA exon 24123046 24123194 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000477567.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-005"; exon_number 6; exon_id "ENSE00001900379.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319895.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13711 chr22 HAVANA transcript 24110847 24122853 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000489582.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-006"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319896.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13712 chr22 HAVANA exon 24110847 24110980 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000489582.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-006"; exon_number 1; exon_id "ENSE00001815593.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319896.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13713 chr22 HAVANA exon 24121374 24121603 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000489582.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-006"; exon_number 2; exon_id "ENSE00003535862.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319896.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13714 chr22 HAVANA exon 24122546 24122689 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000489582.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-006"; exon_number 3; exon_id "ENSE00003496658.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319896.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13715 chr22 HAVANA exon 24122769 24122853 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000489582.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-006"; exon_number 4; exon_id "ENSE00001872980.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319896.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13716 chr22 HAVANA transcript 24115006 24126503 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13717 chr22 HAVANA exon 24115006 24115165 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 1; exon_id "ENSE00001899577.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13718 chr22 HAVANA CDS 24115058 24115165 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 1; exon_id "ENSE00001899577.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13719 chr22 HAVANA start_codon 24115058 24115060 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 1; exon_id "ENSE00001899577.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13720 chr22 HAVANA exon 24121374 24121603 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 2; exon_id "ENSE00003502030.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13721 chr22 HAVANA CDS 24121374 24121603 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 2; exon_id "ENSE00003502030.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13722 chr22 HAVANA exon 24122546 24122689 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 3; exon_id "ENSE00003649425.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13723 chr22 HAVANA CDS 24122546 24122689 . + 1 gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 3; exon_id "ENSE00003649425.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13724 chr22 HAVANA exon 24122769 24122902 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 4; exon_id "ENSE00003600315.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13725 chr22 HAVANA CDS 24122769 24122902 . + 1 gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 4; exon_id "ENSE00003600315.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13726 chr22 HAVANA exon 24123046 24123287 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 5; exon_id "ENSE00003510640.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13727 chr22 HAVANA CDS 24123046 24123287 . + 2 gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 5; exon_id "ENSE00003510640.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13728 chr22 HAVANA exon 24123380 24123596 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 6; exon_id "ENSE00003523555.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13729 chr22 HAVANA CDS 24123380 24123596 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 6; exon_id "ENSE00003523555.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13730 chr22 HAVANA exon 24124413 24124670 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 7; exon_id "ENSE00003692704.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13731 chr22 HAVANA CDS 24124413 24124670 . + 2 gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 7; exon_id "ENSE00003692704.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13732 chr22 HAVANA exon 24125598 24126503 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 8; exon_id "ENSE00003636030.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13733 chr22 HAVANA CDS 24125598 24125728 . + 2 gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 8; exon_id "ENSE00003636030.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13734 chr22 HAVANA stop_codon 24125729 24125731 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; exon_number 8; exon_id "ENSE00003636030.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13735 chr22 HAVANA UTR 24115006 24115057 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13736 chr22 HAVANA UTR 24125729 24126503 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000215743.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MMP11-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13816.1"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319891.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13737 chr22 HAVANA transcript 24115033 24121884 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000465730.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-007"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13738 chr22 HAVANA exon 24115033 24115165 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000465730.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-007"; exon_number 1; exon_id "ENSE00003536922.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13739 chr22 HAVANA exon 24121374 24121884 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000465730.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-007"; exon_number 2; exon_id "ENSE00001827674.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319897.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13740 chr22 HAVANA transcript 24115033 24122671 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000428253.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-008"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319898.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13741 chr22 HAVANA exon 24115033 24115165 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000428253.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-008"; exon_number 1; exon_id "ENSE00003636460.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319898.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13742 chr22 HAVANA CDS 24115058 24115165 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000428253.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-008"; exon_number 1; exon_id "ENSE00003636460.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319898.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13743 chr22 HAVANA start_codon 24115058 24115060 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000428253.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-008"; exon_number 1; exon_id "ENSE00003636460.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319898.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13744 chr22 HAVANA exon 24121374 24121651 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000428253.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-008"; exon_number 2; exon_id "ENSE00001647462.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319898.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13745 chr22 HAVANA CDS 24121374 24121604 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000428253.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-008"; exon_number 2; exon_id "ENSE00001647462.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319898.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13746 chr22 HAVANA stop_codon 24121605 24121607 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000428253.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-008"; exon_number 2; exon_id "ENSE00001647462.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319898.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13747 chr22 HAVANA exon 24122546 24122671 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000428253.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-008"; exon_number 3; exon_id "ENSE00001604000.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319898.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13748 chr22 HAVANA UTR 24115033 24115057 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000428253.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-008"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319898.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13749 chr22 HAVANA UTR 24121605 24121651 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000428253.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-008"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319898.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13750 chr22 HAVANA UTR 24122546 24122671 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000428253.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-008"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319898.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13751 chr22 HAVANA transcript 24115036 24126503 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13752 chr22 HAVANA exon 24115036 24115165 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 1; exon_id "ENSE00000879475.3"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13753 chr22 HAVANA CDS 24115058 24115165 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 1; exon_id "ENSE00000879475.3"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13754 chr22 HAVANA start_codon 24115058 24115060 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 1; exon_id "ENSE00000879475.3"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13755 chr22 HAVANA exon 24121374 24121555 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 2; exon_id "ENSE00001784093.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13756 chr22 HAVANA CDS 24121374 24121555 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 2; exon_id "ENSE00001784093.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13757 chr22 HAVANA exon 24122546 24122689 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 3; exon_id "ENSE00003649425.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13758 chr22 HAVANA CDS 24122546 24122689 . + 1 gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 3; exon_id "ENSE00003649425.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13759 chr22 HAVANA exon 24122769 24122902 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 4; exon_id "ENSE00003600315.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13760 chr22 HAVANA CDS 24122769 24122902 . + 1 gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 4; exon_id "ENSE00003600315.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13761 chr22 HAVANA exon 24123046 24123287 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 5; exon_id "ENSE00003510640.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13762 chr22 HAVANA CDS 24123046 24123287 . + 2 gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 5; exon_id "ENSE00003510640.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13763 chr22 HAVANA exon 24123380 24123596 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 6; exon_id "ENSE00003523555.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13764 chr22 HAVANA CDS 24123380 24123596 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 6; exon_id "ENSE00003523555.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13765 chr22 HAVANA exon 24124555 24124670 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 7; exon_id "ENSE00001738085.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13766 chr22 HAVANA CDS 24124555 24124589 . + 2 gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 7; exon_id "ENSE00001738085.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13767 chr22 HAVANA stop_codon 24124590 24124592 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 7; exon_id "ENSE00001738085.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13768 chr22 HAVANA exon 24125598 24126503 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; exon_number 8; exon_id "ENSE00003622713.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13769 chr22 HAVANA UTR 24115036 24115057 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13770 chr22 HAVANA UTR 24124590 24124670 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13771 chr22 HAVANA UTR 24125598 24126503 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000437086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-002"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319892.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13772 chr22 HAVANA transcript 24119828 24123287 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000460352.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-009"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319899.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13773 chr22 HAVANA exon 24119828 24119995 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000460352.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-009"; exon_number 1; exon_id "ENSE00001927106.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319899.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13774 chr22 HAVANA exon 24121374 24121603 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000460352.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-009"; exon_number 2; exon_id "ENSE00003535862.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319899.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13775 chr22 HAVANA exon 24122546 24122689 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000460352.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-009"; exon_number 3; exon_id "ENSE00003496658.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319899.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13776 chr22 HAVANA exon 24122769 24122902 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000460352.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-009"; exon_number 4; exon_id "ENSE00003615433.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319899.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13777 chr22 HAVANA exon 24123046 24123287 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000460352.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-009"; exon_number 5; exon_id "ENSE00003497173.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319899.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13778 chr22 HAVANA transcript 24123067 24125628 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000434318.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319894.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13779 chr22 HAVANA exon 24123067 24123287 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000434318.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-004"; exon_number 1; exon_id "ENSE00001649822.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319894.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13780 chr22 HAVANA CDS 24123067 24123287 . + 2 gene_id "ENSG00000099953.5"; transcript_id "ENST00000434318.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-004"; exon_number 1; exon_id "ENSE00001649822.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319894.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13781 chr22 HAVANA exon 24123380 24123596 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000434318.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-004"; exon_number 2; exon_id "ENSE00003523555.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319894.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13782 chr22 HAVANA CDS 24123380 24123596 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000434318.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-004"; exon_number 2; exon_id "ENSE00003523555.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319894.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13783 chr22 HAVANA exon 24123975 24124670 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000434318.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-004"; exon_number 3; exon_id "ENSE00001707844.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319894.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13784 chr22 HAVANA CDS 24123975 24124045 . + 2 gene_id "ENSG00000099953.5"; transcript_id "ENST00000434318.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-004"; exon_number 3; exon_id "ENSE00001707844.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319894.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13785 chr22 HAVANA stop_codon 24124046 24124048 . + 0 gene_id "ENSG00000099953.5"; transcript_id "ENST00000434318.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-004"; exon_number 3; exon_id "ENSE00001707844.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319894.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13786 chr22 HAVANA exon 24125598 24125628 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000434318.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-004"; exon_number 4; exon_id "ENSE00001631638.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319894.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13787 chr22 HAVANA UTR 24124046 24124670 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000434318.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319894.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13788 chr22 HAVANA UTR 24125598 24125628 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000434318.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "MMP11-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319894.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13789 chr22 HAVANA transcript 24123128 24124502 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000493132.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-010"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319900.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13790 chr22 HAVANA exon 24123128 24123596 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000493132.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-010"; exon_number 1; exon_id "ENSE00001918165.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319900.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13791 chr22 HAVANA exon 24124413 24124502 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000493132.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-010"; exon_number 2; exon_id "ENSE00001896063.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319900.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13792 chr22 HAVANA transcript 24123144 24123938 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000492464.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-011"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319901.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13793 chr22 HAVANA exon 24123144 24123287 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000492464.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-011"; exon_number 1; exon_id "ENSE00001913470.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319901.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13794 chr22 HAVANA exon 24123380 24123938 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000492464.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MMP11-011"; exon_number 2; exon_id "ENSE00001881214.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319901.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13795 chr22 HAVANA transcript 24123451 24124815 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000488363.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-012"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319902.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13796 chr22 HAVANA exon 24123451 24123596 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000488363.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-012"; exon_number 1; exon_id "ENSE00001865456.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319902.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13797 chr22 HAVANA exon 24124413 24124815 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000488363.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-012"; exon_number 2; exon_id "ENSE00001813939.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319902.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13798 chr22 HAVANA transcript 24124001 24124670 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000480185.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-013"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13799 chr22 HAVANA exon 24124001 24124112 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000480185.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-013"; exon_number 1; exon_id "ENSE00001856729.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13800 chr22 HAVANA exon 24124413 24124670 . + . gene_id "ENSG00000099953.5"; transcript_id "ENST00000480185.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MMP11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MMP11-013"; exon_number 2; exon_id "ENSE00003566453.1"; level 2; havana_gene "OTTHUMG00000150742.2"; havana_transcript "OTTHUMT00000319903.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13801 chr22 ENSEMBL gene 24124467 24126145 . - . gene_id "ENSG00000267954.1"; transcript_id "ENSG00000267954.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP000349.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP000349.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13802 chr22 ENSEMBL transcript 24124467 24126145 . - . gene_id "ENSG00000267954.1"; transcript_id "ENST00000598975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP000349.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP000349.1-201"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13803 chr22 ENSEMBL exon 24125598 24126145 . - . gene_id "ENSG00000267954.1"; transcript_id "ENST00000598975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP000349.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP000349.1-201"; exon_number 1; exon_id "ENSE00003071180.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13804 chr22 ENSEMBL CDS 24125598 24126145 . - 0 gene_id "ENSG00000267954.1"; transcript_id "ENST00000598975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP000349.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP000349.1-201"; exon_number 1; exon_id "ENSE00003071180.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13805 chr22 ENSEMBL start_codon 24126143 24126145 . - 0 gene_id "ENSG00000267954.1"; transcript_id "ENST00000598975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP000349.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP000349.1-201"; exon_number 1; exon_id "ENSE00003071180.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13806 chr22 ENSEMBL exon 24124616 24124670 . - . gene_id "ENSG00000267954.1"; transcript_id "ENST00000598975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP000349.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP000349.1-201"; exon_number 2; exon_id "ENSE00003049790.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13807 chr22 ENSEMBL CDS 24124616 24124670 . - 1 gene_id "ENSG00000267954.1"; transcript_id "ENST00000598975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP000349.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP000349.1-201"; exon_number 2; exon_id "ENSE00003049790.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13808 chr22 ENSEMBL exon 24124467 24124610 . - . gene_id "ENSG00000267954.1"; transcript_id "ENST00000598975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP000349.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP000349.1-201"; exon_number 3; exon_id "ENSE00002989602.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13809 chr22 ENSEMBL CDS 24124470 24124610 . - 0 gene_id "ENSG00000267954.1"; transcript_id "ENST00000598975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP000349.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP000349.1-201"; exon_number 3; exon_id "ENSE00002989602.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13810 chr22 ENSEMBL stop_codon 24124467 24124469 . - 0 gene_id "ENSG00000267954.1"; transcript_id "ENST00000598975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP000349.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP000349.1-201"; exon_number 3; exon_id "ENSE00002989602.1"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13811 chr22 ENSEMBL UTR 24124467 24124469 . - . gene_id "ENSG00000267954.1"; transcript_id "ENST00000598975.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP000349.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP000349.1-201"; level 3; tag "basic"; tag "appris_principal";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13812 chr22 HAVANA gene 24129150 24176703 . + . gene_id "ENSG00000099956.13"; transcript_id "ENSG00000099956.13"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1"; level 1; havana_gene "OTTHUMG00000150737.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13813 chr22 HAVANA transcript 24129150 24145609 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000417137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319877.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13814 chr22 HAVANA exon 24129150 24129449 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000417137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-006"; exon_number 1; exon_id "ENSE00000879478.5"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319877.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13815 chr22 HAVANA CDS 24129357 24129449 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000417137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-006"; exon_number 1; exon_id "ENSE00000879478.5"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319877.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13816 chr22 HAVANA start_codon 24129357 24129359 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000417137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-006"; exon_number 1; exon_id "ENSE00000879478.5"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319877.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13817 chr22 HAVANA exon 24133943 24134081 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000417137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-006"; exon_number 2; exon_id "ENSE00001224609.5"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319877.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13818 chr22 HAVANA CDS 24133943 24134081 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000417137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-006"; exon_number 2; exon_id "ENSE00001224609.5"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319877.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13819 chr22 HAVANA exon 24135746 24135875 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000417137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-006"; exon_number 3; exon_id "ENSE00000651413.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319877.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13820 chr22 HAVANA CDS 24135746 24135875 . + 2 gene_id "ENSG00000099956.13"; transcript_id "ENST00000417137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-006"; exon_number 3; exon_id "ENSE00000651413.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319877.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13821 chr22 HAVANA exon 24143131 24143322 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000417137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-006"; exon_number 4; exon_id "ENSE00001385887.3"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319877.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13822 chr22 HAVANA CDS 24143131 24143322 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000417137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-006"; exon_number 4; exon_id "ENSE00001385887.3"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319877.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13823 chr22 HAVANA exon 24145482 24145609 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000417137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-006"; exon_number 5; exon_id "ENSE00003591896.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319877.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13824 chr22 HAVANA CDS 24145482 24145609 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000417137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-006"; exon_number 5; exon_id "ENSE00003591896.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319877.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13825 chr22 HAVANA UTR 24129150 24129356 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000417137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319877.7";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13826 chr22 HAVANA transcript 24129150 24176703 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13827 chr22 HAVANA exon 24129150 24129449 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 1; exon_id "ENSE00000879478.5"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13828 chr22 HAVANA CDS 24129357 24129449 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 1; exon_id "ENSE00000879478.5"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13829 chr22 HAVANA start_codon 24129357 24129359 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 1; exon_id "ENSE00000879478.5"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13830 chr22 HAVANA exon 24133943 24134054 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 2; exon_id "ENSE00001380326.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13831 chr22 HAVANA CDS 24133943 24134054 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 2; exon_id "ENSE00001380326.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13832 chr22 HAVANA exon 24135746 24135875 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 3; exon_id "ENSE00000651413.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13833 chr22 HAVANA CDS 24135746 24135875 . + 2 gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 3; exon_id "ENSE00000651413.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13834 chr22 HAVANA exon 24143131 24143322 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 4; exon_id "ENSE00001385887.3"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13835 chr22 HAVANA CDS 24143131 24143322 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 4; exon_id "ENSE00001385887.3"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13836 chr22 HAVANA exon 24145482 24145609 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 5; exon_id "ENSE00003588634.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13837 chr22 HAVANA CDS 24145482 24145609 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 5; exon_id "ENSE00003588634.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13838 chr22 HAVANA exon 24158957 24159123 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 6; exon_id "ENSE00000651422.3"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13839 chr22 HAVANA CDS 24158957 24159123 . + 2 gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 6; exon_id "ENSE00000651422.3"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13840 chr22 HAVANA exon 24167412 24167602 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 7; exon_id "ENSE00000651425.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13841 chr22 HAVANA CDS 24167412 24167602 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 7; exon_id "ENSE00000651425.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13842 chr22 HAVANA exon 24175759 24175890 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 8; exon_id "ENSE00000651428.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13843 chr22 HAVANA CDS 24175759 24175890 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 8; exon_id "ENSE00000651428.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13844 chr22 HAVANA exon 24176328 24176703 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 9; exon_id "ENSE00000879482.6"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13845 chr22 HAVANA CDS 24176328 24176364 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 9; exon_id "ENSE00000879482.6"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13846 chr22 HAVANA stop_codon 24176365 24176367 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; exon_number 9; exon_id "ENSE00000879482.6"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13847 chr22 HAVANA UTR 24129150 24129356 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13848 chr22 HAVANA UTR 24176365 24176703 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000344921.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319876.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13849 chr22 HAVANA transcript 24129161 24176703 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13850 chr22 HAVANA exon 24129161 24129449 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 1; exon_id "ENSE00001918981.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13851 chr22 HAVANA CDS 24129357 24129449 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 1; exon_id "ENSE00001918981.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13852 chr22 HAVANA start_codon 24129357 24129359 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 1; exon_id "ENSE00001918981.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13853 chr22 HAVANA exon 24133943 24134081 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 2; exon_id "ENSE00001224609.5"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13854 chr22 HAVANA CDS 24133943 24134081 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 2; exon_id "ENSE00001224609.5"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13855 chr22 HAVANA exon 24135746 24135875 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 3; exon_id "ENSE00000651413.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13856 chr22 HAVANA CDS 24135746 24135875 . + 2 gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 3; exon_id "ENSE00000651413.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13857 chr22 HAVANA exon 24143131 24143268 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 4; exon_id "ENSE00000879480.4"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13858 chr22 HAVANA CDS 24143131 24143268 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 4; exon_id "ENSE00000879480.4"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13859 chr22 HAVANA exon 24145482 24145609 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 5; exon_id "ENSE00003588634.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13860 chr22 HAVANA CDS 24145482 24145609 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 5; exon_id "ENSE00003588634.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13861 chr22 HAVANA exon 24158957 24159123 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 6; exon_id "ENSE00000651422.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13862 chr22 HAVANA CDS 24158957 24159123 . + 2 gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 6; exon_id "ENSE00000651422.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13863 chr22 HAVANA exon 24167412 24167602 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 7; exon_id "ENSE00000651425.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13864 chr22 HAVANA CDS 24167412 24167602 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 7; exon_id "ENSE00000651425.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13865 chr22 HAVANA exon 24175759 24175890 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 8; exon_id "ENSE00000651428.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13866 chr22 HAVANA CDS 24175759 24175890 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 8; exon_id "ENSE00000651428.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13867 chr22 HAVANA exon 24176328 24176703 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 9; exon_id "ENSE00000879482.6"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13868 chr22 HAVANA CDS 24176328 24176364 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 9; exon_id "ENSE00000879482.6"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13869 chr22 HAVANA stop_codon 24176365 24176367 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; exon_number 9; exon_id "ENSE00000879482.6"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13870 chr22 HAVANA UTR 24129161 24129356 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13871 chr22 HAVANA UTR 24176365 24176703 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000263121.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS13817.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319872.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13872 chr22 HAVANA transcript 24129181 24176703 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13873 chr22 HAVANA exon 24129181 24129449 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 1; exon_id "ENSE00001547041.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13874 chr22 HAVANA CDS 24129357 24129449 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 1; exon_id "ENSE00001547041.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13875 chr22 HAVANA start_codon 24129357 24129359 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 1; exon_id "ENSE00001547041.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13876 chr22 HAVANA exon 24133943 24134054 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 2; exon_id "ENSE00001380326.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13877 chr22 HAVANA CDS 24133943 24134054 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 2; exon_id "ENSE00001380326.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13878 chr22 HAVANA exon 24135746 24135875 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 3; exon_id "ENSE00000651413.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13879 chr22 HAVANA CDS 24135746 24135875 . + 2 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 3; exon_id "ENSE00000651413.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13880 chr22 HAVANA exon 24143131 24143268 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 4; exon_id "ENSE00000879480.4"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13881 chr22 HAVANA CDS 24143131 24143268 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 4; exon_id "ENSE00000879480.4"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13882 chr22 HAVANA exon 24145482 24145609 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 5; exon_id "ENSE00003588634.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13883 chr22 HAVANA CDS 24145482 24145609 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 5; exon_id "ENSE00003588634.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13884 chr22 HAVANA exon 24158957 24159123 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 6; exon_id "ENSE00000651422.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13885 chr22 HAVANA CDS 24158957 24159123 . + 2 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 6; exon_id "ENSE00000651422.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13886 chr22 HAVANA exon 24167412 24167602 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 7; exon_id "ENSE00000651425.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13887 chr22 HAVANA CDS 24167412 24167602 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 7; exon_id "ENSE00000651425.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13888 chr22 HAVANA exon 24175759 24175890 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 8; exon_id "ENSE00000651428.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13889 chr22 HAVANA CDS 24175759 24175890 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 8; exon_id "ENSE00000651428.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13890 chr22 HAVANA exon 24176328 24176703 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 9; exon_id "ENSE00000879482.6"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13891 chr22 HAVANA CDS 24176328 24176364 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 9; exon_id "ENSE00000879482.6"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13892 chr22 HAVANA stop_codon 24176365 24176367 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; exon_number 9; exon_id "ENSE00000879482.6"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13893 chr22 HAVANA UTR 24129181 24129356 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13894 chr22 HAVANA UTR 24176365 24176703 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407422.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SMARCB1-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS46671.1"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319873.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13895 chr22 HAVANA transcript 24129198 24176370 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13896 chr22 HAVANA exon 24129198 24129449 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 1; exon_id "ENSE00001929669.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13897 chr22 HAVANA CDS 24129357 24129449 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 1; exon_id "ENSE00001929669.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13898 chr22 HAVANA start_codon 24129357 24129359 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 1; exon_id "ENSE00001929669.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13899 chr22 HAVANA exon 24133943 24134081 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 2; exon_id "ENSE00001224609.5"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13900 chr22 HAVANA CDS 24133943 24134081 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 2; exon_id "ENSE00001224609.5"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13901 chr22 HAVANA exon 24135746 24135875 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 3; exon_id "ENSE00000651413.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13902 chr22 HAVANA CDS 24135746 24135875 . + 2 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 3; exon_id "ENSE00000651413.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13903 chr22 HAVANA exon 24145482 24145609 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 4; exon_id "ENSE00003588634.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13904 chr22 HAVANA CDS 24145482 24145609 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 4; exon_id "ENSE00003588634.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13905 chr22 HAVANA exon 24158957 24159123 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 5; exon_id "ENSE00000651422.3"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13906 chr22 HAVANA CDS 24158957 24159123 . + 2 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 5; exon_id "ENSE00000651422.3"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13907 chr22 HAVANA exon 24167412 24167602 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 6; exon_id "ENSE00000651425.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13908 chr22 HAVANA CDS 24167412 24167602 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 6; exon_id "ENSE00000651425.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13909 chr22 HAVANA exon 24175759 24175890 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 7; exon_id "ENSE00000651428.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13910 chr22 HAVANA CDS 24175759 24175890 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 7; exon_id "ENSE00000651428.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13911 chr22 HAVANA exon 24176328 24176370 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 8; exon_id "ENSE00001870443.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13912 chr22 HAVANA CDS 24176328 24176364 . + 1 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 8; exon_id "ENSE00001870443.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13913 chr22 HAVANA stop_codon 24176365 24176367 . + 0 gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; exon_number 8; exon_id "ENSE00001870443.1"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13914 chr22 HAVANA UTR 24129198 24129356 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13915 chr22 HAVANA UTR 24176365 24176370 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000407082.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SMARCB1-003"; level 1; tag "not_organism_supported"; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319874.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13916 chr22 HAVANA transcript 24135788 24143647 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000491967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMARCB1-004"; level 2; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319875.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13917 chr22 HAVANA exon 24135788 24135875 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000491967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMARCB1-004"; exon_number 1; exon_id "ENSE00001828615.1"; level 2; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319875.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13918 chr22 HAVANA exon 24143131 24143647 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000491967.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMARCB1-004"; exon_number 2; exon_id "ENSE00001952178.1"; level 2; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319875.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13919 chr22 HAVANA transcript 24158556 24167503 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000477836.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMARCB1-007"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13920 chr22 HAVANA exon 24158556 24159123 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000477836.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMARCB1-007"; exon_number 1; exon_id "ENSE00001919098.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13921 chr22 HAVANA exon 24167412 24167503 . + . gene_id "ENSG00000099956.13"; transcript_id "ENST00000477836.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SMARCB1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SMARCB1-007"; exon_number 2; exon_id "ENSE00001928851.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150737.7"; havana_transcript "OTTHUMT00000319878.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
13922 chr22 HAVANA gene 24176690 24181315 . - . gene_id "ENSG00000099958.10"; transcript_id "ENSG00000099958.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3"; level 1; havana_gene "OTTHUMG00000150743.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
13923 chr22 HAVANA transcript 24176690 24178701 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000464023.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-010"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319913.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13924 chr22 HAVANA exon 24178487 24178701 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000464023.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-010"; exon_number 1; exon_id "ENSE00001942501.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319913.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13925 chr22 HAVANA exon 24176690 24177119 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000464023.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-010"; exon_number 2; exon_id "ENSE00003466991.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319913.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13926 chr22 HAVANA transcript 24176690 24181193 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13927 chr22 HAVANA exon 24181082 24181193 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 1; exon_id "ENSE00001554277.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13928 chr22 HAVANA CDS 24181082 24181174 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 1; exon_id "ENSE00001554277.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
13929 chr22 HAVANA start_codon 24181172 24181174 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 1; exon_id "ENSE00001554277.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13930 chr22 HAVANA exon 24180898 24180963 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 2; exon_id "ENSE00000651447.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13931 chr22 HAVANA CDS 24180898 24180963 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 2; exon_id "ENSE00000651447.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13932 chr22 HAVANA exon 24180751 24180824 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 3; exon_id "ENSE00003571758.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13933 chr22 HAVANA CDS 24180751 24180824 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 3; exon_id "ENSE00003571758.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13934 chr22 HAVANA exon 24180539 24180632 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 4; exon_id "ENSE00003616444.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13935 chr22 HAVANA CDS 24180539 24180632 . - 1 gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 4; exon_id "ENSE00003616444.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13936 chr22 HAVANA exon 24179846 24180041 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 5; exon_id "ENSE00000651436.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13937 chr22 HAVANA CDS 24179846 24180041 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 5; exon_id "ENSE00000651436.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13938 chr22 HAVANA exon 24179251 24179341 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 6; exon_id "ENSE00003477405.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13939 chr22 HAVANA CDS 24179251 24179341 . - 2 gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 6; exon_id "ENSE00003477405.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13940 chr22 HAVANA exon 24176690 24177119 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 7; exon_id "ENSE00003683907.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
13941 chr22 HAVANA CDS 24177017 24177119 . - 1 gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 7; exon_id "ENSE00003683907.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13942 chr22 HAVANA stop_codon 24177014 24177016 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; exon_number 7; exon_id "ENSE00003683907.1"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13943 chr22 HAVANA UTR 24181175 24181193 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13944 chr22 HAVANA UTR 24176690 24177016 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000406855.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-001"; level 1; tag "basic"; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS46672.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319904.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13945 chr22 HAVANA transcript 24176690 24181193 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13946 chr22 HAVANA exon 24181082 24181193 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; exon_number 1; exon_id "ENSE00001554277.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13947 chr22 HAVANA CDS 24181082 24181174 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; exon_number 1; exon_id "ENSE00001554277.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13948 chr22 HAVANA start_codon 24181172 24181174 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; exon_number 1; exon_id "ENSE00001554277.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13949 chr22 HAVANA exon 24180751 24180903 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; exon_number 2; exon_id "ENSE00001554856.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13950 chr22 HAVANA CDS 24180751 24180903 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; exon_number 2; exon_id "ENSE00001554856.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13951 chr22 HAVANA exon 24180539 24180632 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; exon_number 3; exon_id "ENSE00003459786.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13952 chr22 HAVANA CDS 24180539 24180632 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; exon_number 3; exon_id "ENSE00003459786.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13953 chr22 HAVANA exon 24180003 24180041 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; exon_number 4; exon_id "ENSE00001557326.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13954 chr22 HAVANA CDS 24180003 24180041 . - 2 gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; exon_number 4; exon_id "ENSE00001557326.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13955 chr22 HAVANA exon 24176690 24179404 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; exon_number 5; exon_id "ENSE00001559403.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13956 chr22 HAVANA CDS 24179250 24179404 . - 2 gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; exon_number 5; exon_id "ENSE00001559403.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13957 chr22 HAVANA stop_codon 24179247 24179249 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; exon_number 5; exon_id "ENSE00001559403.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13958 chr22 HAVANA UTR 24181175 24181193 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13959 chr22 HAVANA UTR 24176690 24179249 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000404056.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DERL3-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319908.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13960 chr22 HAVANA transcript 24176690 24181315 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000290730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DERL3-004"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13961 chr22 HAVANA exon 24180898 24181315 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000290730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DERL3-004"; exon_number 1; exon_id "ENSE00001823777.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13962 chr22 HAVANA exon 24180751 24180824 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000290730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DERL3-004"; exon_number 2; exon_id "ENSE00003578492.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13963 chr22 HAVANA exon 24180325 24180632 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000290730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DERL3-004"; exon_number 3; exon_id "ENSE00001900035.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13964 chr22 HAVANA exon 24179846 24179918 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000290730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DERL3-004"; exon_number 4; exon_id "ENSE00001821303.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13965 chr22 HAVANA exon 24176690 24179341 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000290730.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DERL3-004"; exon_number 5; exon_id "ENSE00001383120.5"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319907.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13966 chr22 HAVANA transcript 24178652 24179871 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000493596.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-008"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319911.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13967 chr22 HAVANA exon 24179846 24179871 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000493596.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-008"; exon_number 1; exon_id "ENSE00001822029.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319911.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13968 chr22 HAVANA exon 24179251 24179341 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000493596.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-008"; exon_number 2; exon_id "ENSE00003576845.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319911.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13969 chr22 HAVANA exon 24178652 24178706 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000493596.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-008"; exon_number 3; exon_id "ENSE00001941280.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319911.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13970 chr22 HAVANA transcript 24178921 24179885 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000464034.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-007"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13971 chr22 HAVANA exon 24179834 24179885 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000464034.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-007"; exon_number 1; exon_id "ENSE00001816754.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13972 chr22 HAVANA exon 24179251 24179341 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000464034.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-007"; exon_number 2; exon_id "ENSE00003576845.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13973 chr22 HAVANA exon 24178921 24179149 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000464034.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-007"; exon_number 3; exon_id "ENSE00003579427.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319910.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13974 chr22 HAVANA transcript 24178921 24180390 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000488272.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-009"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13975 chr22 HAVANA exon 24180325 24180390 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000488272.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-009"; exon_number 1; exon_id "ENSE00001877815.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13976 chr22 HAVANA exon 24179846 24179918 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000488272.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-009"; exon_number 2; exon_id "ENSE00001821303.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13977 chr22 HAVANA exon 24179251 24179341 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000488272.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-009"; exon_number 3; exon_id "ENSE00003576845.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13978 chr22 HAVANA exon 24178921 24179149 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000488272.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DERL3-009"; exon_number 4; exon_id "ENSE00003579427.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319912.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13979 chr22 HAVANA transcript 24178921 24181191 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13980 chr22 HAVANA exon 24181082 24181191 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 1; exon_id "ENSE00001945850.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13981 chr22 HAVANA CDS 24181082 24181174 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 1; exon_id "ENSE00001945850.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13982 chr22 HAVANA start_codon 24181172 24181174 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 1; exon_id "ENSE00001945850.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13983 chr22 HAVANA exon 24180898 24180963 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 2; exon_id "ENSE00000651447.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13984 chr22 HAVANA CDS 24180898 24180963 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 2; exon_id "ENSE00000651447.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13985 chr22 HAVANA exon 24180751 24180824 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 3; exon_id "ENSE00003571758.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13986 chr22 HAVANA CDS 24180751 24180824 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 3; exon_id "ENSE00003571758.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13987 chr22 HAVANA exon 24180539 24180632 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 4; exon_id "ENSE00003616444.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13988 chr22 HAVANA CDS 24180539 24180632 . - 1 gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 4; exon_id "ENSE00003616444.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13989 chr22 HAVANA exon 24179846 24180041 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 5; exon_id "ENSE00000651436.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13990 chr22 HAVANA CDS 24179846 24180041 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 5; exon_id "ENSE00000651436.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13991 chr22 HAVANA exon 24179251 24179341 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 6; exon_id "ENSE00003477405.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13992 chr22 HAVANA CDS 24179251 24179341 . - 2 gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 6; exon_id "ENSE00003477405.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13993 chr22 HAVANA exon 24178921 24179149 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 7; exon_id "ENSE00003692329.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13994 chr22 HAVANA CDS 24179059 24179149 . - 1 gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 7; exon_id "ENSE00003692329.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13995 chr22 HAVANA stop_codon 24179056 24179058 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; exon_number 7; exon_id "ENSE00003692329.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13996 chr22 HAVANA UTR 24181175 24181191 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13997 chr22 HAVANA UTR 24178921 24179058 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000318109.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-002"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33615.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319905.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13998 chr22 HAVANA transcript 24178921 24181199 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
13999 chr22 HAVANA exon 24181082 24181199 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; exon_number 1; exon_id "ENSE00001424416.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14000 chr22 HAVANA CDS 24181082 24181174 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; exon_number 1; exon_id "ENSE00001424416.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14001 chr22 HAVANA start_codon 24181172 24181174 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; exon_number 1; exon_id "ENSE00001424416.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14002 chr22 HAVANA exon 24180898 24180963 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; exon_number 2; exon_id "ENSE00000651447.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14003 chr22 HAVANA CDS 24180898 24180963 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; exon_number 2; exon_id "ENSE00000651447.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14004 chr22 HAVANA exon 24180751 24180824 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; exon_number 3; exon_id "ENSE00003571758.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14005 chr22 HAVANA CDS 24180751 24180824 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; exon_number 3; exon_id "ENSE00003571758.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14006 chr22 HAVANA exon 24180539 24180632 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; exon_number 4; exon_id "ENSE00003616444.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14007 chr22 HAVANA CDS 24180539 24180632 . - 1 gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; exon_number 4; exon_id "ENSE00003616444.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14008 chr22 HAVANA exon 24179846 24180041 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; exon_number 5; exon_id "ENSE00000651436.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14009 chr22 HAVANA CDS 24179846 24180041 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; exon_number 5; exon_id "ENSE00000651436.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14010 chr22 HAVANA exon 24178921 24179341 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; exon_number 6; exon_id "ENSE00001951376.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14011 chr22 HAVANA CDS 24179250 24179341 . - 2 gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; exon_number 6; exon_id "ENSE00001951376.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14012 chr22 HAVANA stop_codon 24179247 24179249 . - 0 gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; exon_number 6; exon_id "ENSE00001951376.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14013 chr22 HAVANA UTR 24181175 24181199 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14014 chr22 HAVANA UTR 24178921 24179249 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000476077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DERL3-003"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42986.1"; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319906.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14015 chr22 HAVANA transcript 24178954 24181191 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000464110.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DERL3-006"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14016 chr22 HAVANA exon 24180898 24181191 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000464110.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DERL3-006"; exon_number 1; exon_id "ENSE00001957411.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14017 chr22 HAVANA exon 24179846 24179918 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000464110.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DERL3-006"; exon_number 2; exon_id "ENSE00001821303.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14018 chr22 HAVANA exon 24178954 24179341 . - . gene_id "ENSG00000099958.10"; transcript_id "ENST00000464110.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DERL3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DERL3-006"; exon_number 3; exon_id "ENSE00001950446.1"; level 2; havana_gene "OTTHUMG00000150743.2"; havana_transcript "OTTHUMT00000319909.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14019 chr22 HAVANA gene 24198614 24199226 . - . gene_id "ENSG00000272973.1"; transcript_id "ENSG00000272973.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "KB-1125A3.11"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "KB-1125A3.11"; level 2; havana_gene "OTTHUMG00000186120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14020 chr22 HAVANA transcript 24198614 24199226 . - . gene_id "ENSG00000272973.1"; transcript_id "ENST00000609825.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "KB-1125A3.11"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "KB-1125A3.11-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186120.1"; havana_transcript "OTTHUMT00000472288.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14021 chr22 HAVANA exon 24198614 24199226 . - . gene_id "ENSG00000272973.1"; transcript_id "ENST00000609825.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "KB-1125A3.11"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "KB-1125A3.11-001"; exon_number 1; exon_id "ENSE00003711380.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186120.1"; havana_transcript "OTTHUMT00000472288.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14022 chr22 HAVANA gene 24198890 24228496 . + . gene_id "ENSG00000133460.15"; transcript_id "ENSG00000133460.15"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11"; level 1; havana_gene "OTTHUMG00000166469.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14023 chr22 HAVANA transcript 24198890 24228496 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14024 chr22 HAVANA exon 24198890 24199178 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 1; exon_id "ENSE00001924373.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14025 chr22 HAVANA CDS 24199158 24199178 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 1; exon_id "ENSE00001924373.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
14026 chr22 HAVANA start_codon 24199158 24199160 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 1; exon_id "ENSE00001924373.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14027 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14028 chr22 HAVANA CDS 24204291 24204389 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14029 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 3; exon_id "ENSE00003682329.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14030 chr22 HAVANA CDS 24210668 24210828 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 3; exon_id "ENSE00003682329.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14031 chr22 HAVANA exon 24217304 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 4; exon_id "ENSE00003674675.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14032 chr22 HAVANA CDS 24217304 24217428 . + 1 gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 4; exon_id "ENSE00003674675.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14033 chr22 HAVANA exon 24219229 24219358 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 5; exon_id "ENSE00003580882.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14034 chr22 HAVANA CDS 24219229 24219358 . + 2 gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 5; exon_id "ENSE00003580882.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14035 chr22 HAVANA exon 24219908 24220056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 6; exon_id "ENSE00003500933.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14036 chr22 HAVANA CDS 24219908 24220056 . + 1 gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 6; exon_id "ENSE00003500933.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14037 chr22 HAVANA exon 24224646 24224833 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 7; exon_id "ENSE00003577221.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14038 chr22 HAVANA CDS 24224646 24224833 . + 2 gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 7; exon_id "ENSE00003577221.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14039 chr22 HAVANA exon 24224946 24225056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 8; exon_id "ENSE00003612609.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14040 chr22 HAVANA CDS 24224946 24225056 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 8; exon_id "ENSE00003612609.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14041 chr22 HAVANA exon 24225959 24226060 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 9; exon_id "ENSE00003549447.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14042 chr22 HAVANA CDS 24225959 24226060 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 9; exon_id "ENSE00003549447.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
14043 chr22 HAVANA exon 24226136 24226211 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 10; exon_id "ENSE00003502128.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14044 chr22 HAVANA CDS 24226136 24226211 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 10; exon_id "ENSE00003502128.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14045 chr22 HAVANA exon 24226489 24226616 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 11; exon_id "ENSE00003553444.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14046 chr22 HAVANA CDS 24226489 24226616 . + 2 gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 11; exon_id "ENSE00003553444.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14047 chr22 HAVANA exon 24226836 24228496 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 12; exon_id "ENSE00003488898.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14048 chr22 HAVANA CDS 24226836 24227033 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 12; exon_id "ENSE00003488898.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14049 chr22 HAVANA stop_codon 24227034 24227036 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; exon_number 12; exon_id "ENSE00003488898.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14050 chr22 HAVANA UTR 24198890 24199157 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14051 chr22 HAVANA UTR 24227034 24228496 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000345044.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS46673.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319889.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14052 chr22 HAVANA transcript 24199050 24212369 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000403208.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-014"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320029.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14053 chr22 HAVANA exon 24199050 24199178 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000403208.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-014"; exon_number 1; exon_id "ENSE00001893471.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320029.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14054 chr22 HAVANA CDS 24199158 24199178 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000403208.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-014"; exon_number 1; exon_id "ENSE00001893471.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320029.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14055 chr22 HAVANA start_codon 24199158 24199160 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000403208.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-014"; exon_number 1; exon_id "ENSE00001893471.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320029.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14056 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000403208.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-014"; exon_number 2; exon_id "ENSE00003629303.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320029.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14057 chr22 HAVANA CDS 24204291 24204389 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000403208.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-014"; exon_number 2; exon_id "ENSE00003629303.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320029.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14058 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000403208.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-014"; exon_number 3; exon_id "ENSE00003682329.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320029.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14059 chr22 HAVANA CDS 24210668 24210828 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000403208.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-014"; exon_number 3; exon_id "ENSE00003682329.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320029.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14060 chr22 HAVANA exon 24212195 24212369 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000403208.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-014"; exon_number 4; exon_id "ENSE00001666627.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320029.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14061 chr22 HAVANA CDS 24212195 24212225 . + 1 gene_id "ENSG00000133460.15"; transcript_id "ENST00000403208.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-014"; exon_number 4; exon_id "ENSE00001666627.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320029.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14062 chr22 HAVANA stop_codon 24212226 24212228 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000403208.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-014"; exon_number 4; exon_id "ENSE00001666627.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320029.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14063 chr22 HAVANA UTR 24199050 24199157 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000403208.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-014"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320029.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14064 chr22 HAVANA UTR 24212226 24212369 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000403208.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-014"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320029.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14065 chr22 HAVANA transcript 24199059 24227723 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14066 chr22 HAVANA exon 24199059 24199178 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 1; exon_id "ENSE00002714107.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14067 chr22 HAVANA exon 24199608 24199718 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 2; exon_id "ENSE00003468336.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14068 chr22 HAVANA CDS 24199677 24199718 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 2; exon_id "ENSE00003468336.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14069 chr22 HAVANA start_codon 24199677 24199679 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 2; exon_id "ENSE00003468336.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14070 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 3; exon_id "ENSE00003629303.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14071 chr22 HAVANA CDS 24204291 24204389 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 3; exon_id "ENSE00003629303.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14072 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 4; exon_id "ENSE00003682329.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14073 chr22 HAVANA CDS 24210668 24210828 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 4; exon_id "ENSE00003682329.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14074 chr22 HAVANA exon 24217304 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 5; exon_id "ENSE00003674675.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14075 chr22 HAVANA CDS 24217304 24217428 . + 1 gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 5; exon_id "ENSE00003674675.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14076 chr22 HAVANA exon 24219229 24219358 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 6; exon_id "ENSE00003580882.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14077 chr22 HAVANA CDS 24219229 24219358 . + 2 gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 6; exon_id "ENSE00003580882.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14078 chr22 HAVANA exon 24219908 24220056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 7; exon_id "ENSE00003500933.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14079 chr22 HAVANA CDS 24219908 24220056 . + 1 gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 7; exon_id "ENSE00003500933.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14080 chr22 HAVANA exon 24224646 24224833 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 8; exon_id "ENSE00003577221.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14081 chr22 HAVANA CDS 24224646 24224833 . + 2 gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 8; exon_id "ENSE00003577221.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14082 chr22 HAVANA exon 24224946 24225056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 9; exon_id "ENSE00003612609.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14083 chr22 HAVANA CDS 24224946 24225056 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 9; exon_id "ENSE00003612609.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14084 chr22 HAVANA exon 24225959 24226060 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 10; exon_id "ENSE00003549447.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14085 chr22 HAVANA CDS 24225959 24226060 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 10; exon_id "ENSE00003549447.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14086 chr22 HAVANA exon 24226136 24226211 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 11; exon_id "ENSE00003502128.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14087 chr22 HAVANA CDS 24226136 24226211 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 11; exon_id "ENSE00003502128.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14088 chr22 HAVANA exon 24226489 24226616 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 12; exon_id "ENSE00003553444.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14089 chr22 HAVANA CDS 24226489 24226616 . + 2 gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 12; exon_id "ENSE00003553444.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14090 chr22 HAVANA exon 24226836 24227723 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 13; exon_id "ENSE00003620502.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14091 chr22 HAVANA CDS 24226836 24227033 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 13; exon_id "ENSE00003620502.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14092 chr22 HAVANA stop_codon 24227034 24227036 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; exon_number 13; exon_id "ENSE00003620502.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14093 chr22 HAVANA UTR 24199059 24199178 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14094 chr22 HAVANA UTR 24199608 24199676 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14095 chr22 HAVANA UTR 24227034 24227723 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000398356.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS13818.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000319890.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14096 chr22 HAVANA transcript 24199121 24219515 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14097 chr22 HAVANA exon 24199121 24199178 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; exon_number 1; exon_id "ENSE00001609575.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14098 chr22 HAVANA CDS 24199158 24199178 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; exon_number 1; exon_id "ENSE00001609575.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14099 chr22 HAVANA start_codon 24199158 24199160 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; exon_number 1; exon_id "ENSE00001609575.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14100 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14101 chr22 HAVANA CDS 24204291 24204389 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14102 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; exon_number 3; exon_id "ENSE00003682329.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14103 chr22 HAVANA CDS 24210668 24210828 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; exon_number 3; exon_id "ENSE00003682329.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14104 chr22 HAVANA exon 24217304 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; exon_number 4; exon_id "ENSE00003674675.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14105 chr22 HAVANA CDS 24217304 24217428 . + 1 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; exon_number 4; exon_id "ENSE00003674675.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14106 chr22 HAVANA exon 24219229 24219515 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; exon_number 5; exon_id "ENSE00001551235.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14107 chr22 HAVANA CDS 24219229 24219359 . + 2 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; exon_number 5; exon_id "ENSE00001551235.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14108 chr22 HAVANA stop_codon 24219360 24219362 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; exon_number 5; exon_id "ENSE00001551235.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14109 chr22 HAVANA UTR 24199121 24199157 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14110 chr22 HAVANA UTR 24219360 24219515 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC2A11-011"; level 2; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320026.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14111 chr22 HAVANA transcript 24199133 24225139 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000467660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-005"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320020.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14112 chr22 HAVANA exon 24199133 24199178 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000467660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-005"; exon_number 1; exon_id "ENSE00001887871.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320020.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14113 chr22 HAVANA exon 24199608 24199718 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000467660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-005"; exon_number 2; exon_id "ENSE00003479068.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320020.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14114 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000467660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-005"; exon_number 3; exon_id "ENSE00003637377.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320020.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14115 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000467660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-005"; exon_number 4; exon_id "ENSE00003556728.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320020.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14116 chr22 HAVANA exon 24217304 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000467660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-005"; exon_number 5; exon_id "ENSE00003673633.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320020.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14117 chr22 HAVANA exon 24219229 24219358 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000467660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-005"; exon_number 6; exon_id "ENSE00003683150.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320020.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14118 chr22 HAVANA exon 24219908 24220056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000467660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-005"; exon_number 7; exon_id "ENSE00003479874.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320020.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14119 chr22 HAVANA exon 24224646 24224833 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000467660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-005"; exon_number 8; exon_id "ENSE00003519561.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320020.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14120 chr22 HAVANA exon 24224946 24225139 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000467660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-005"; exon_number 9; exon_id "ENSE00001879427.1"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "basic"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320020.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14121 chr22 HAVANA transcript 24199138 24225138 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405286.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-012"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320027.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14122 chr22 HAVANA exon 24199138 24199178 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405286.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-012"; exon_number 1; exon_id "ENSE00001552560.2"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320027.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14123 chr22 HAVANA exon 24199608 24199718 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405286.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-012"; exon_number 2; exon_id "ENSE00003479068.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320027.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14124 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405286.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-012"; exon_number 3; exon_id "ENSE00003637377.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320027.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14125 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405286.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-012"; exon_number 4; exon_id "ENSE00003556728.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320027.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14126 chr22 HAVANA exon 24217304 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405286.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-012"; exon_number 5; exon_id "ENSE00003673633.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320027.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14127 chr22 HAVANA exon 24219229 24219358 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405286.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-012"; exon_number 6; exon_id "ENSE00003683150.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320027.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14128 chr22 HAVANA exon 24224646 24224833 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405286.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-012"; exon_number 7; exon_id "ENSE00003519561.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320027.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14129 chr22 HAVANA exon 24224946 24225138 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405286.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-012"; exon_number 8; exon_id "ENSE00001667812.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320027.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14130 chr22 HAVANA transcript 24199144 24227120 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14131 chr22 HAVANA exon 24199144 24199178 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 1; exon_id "ENSE00003679599.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14132 chr22 HAVANA CDS 24199158 24199178 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 1; exon_id "ENSE00003679599.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14133 chr22 HAVANA start_codon 24199158 24199160 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 1; exon_id "ENSE00003679599.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14134 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14135 chr22 HAVANA CDS 24204291 24204389 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14136 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 3; exon_id "ENSE00003682329.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14137 chr22 HAVANA CDS 24210668 24210828 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 3; exon_id "ENSE00003682329.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14138 chr22 HAVANA exon 24217308 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 4; exon_id "ENSE00003650906.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14139 chr22 HAVANA CDS 24217308 24217320 . + 1 gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 4; exon_id "ENSE00003650906.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14140 chr22 HAVANA stop_codon 24217321 24217323 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 4; exon_id "ENSE00003650906.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14141 chr22 HAVANA exon 24219229 24219358 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 5; exon_id "ENSE00003683150.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14142 chr22 HAVANA exon 24224646 24224833 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 6; exon_id "ENSE00003519561.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14143 chr22 HAVANA exon 24224946 24225056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 7; exon_id "ENSE00003498279.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14144 chr22 HAVANA exon 24225959 24226060 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 8; exon_id "ENSE00003496790.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14145 chr22 HAVANA exon 24226136 24226211 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 9; exon_id "ENSE00003528988.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14146 chr22 HAVANA exon 24226489 24226616 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 10; exon_id "ENSE00003459104.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14147 chr22 HAVANA exon 24226836 24227120 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; exon_number 11; exon_id "ENSE00001781531.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14148 chr22 HAVANA UTR 24199144 24199157 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14149 chr22 HAVANA UTR 24217321 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14150 chr22 HAVANA UTR 24219229 24219358 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14151 chr22 HAVANA UTR 24224646 24224833 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14152 chr22 HAVANA UTR 24224946 24225056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14153 chr22 HAVANA UTR 24225959 24226060 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14154 chr22 HAVANA UTR 24226136 24226211 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14155 chr22 HAVANA UTR 24226489 24226616 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14156 chr22 HAVANA UTR 24226836 24227120 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000255830.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-006"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320021.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14157 chr22 HAVANA transcript 24199144 24227738 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000489322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-007"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320022.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14158 chr22 HAVANA exon 24199144 24199178 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000489322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-007"; exon_number 1; exon_id "ENSE00003601086.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320022.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14159 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000489322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-007"; exon_number 2; exon_id "ENSE00003637377.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320022.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14160 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000489322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-007"; exon_number 3; exon_id "ENSE00003556728.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320022.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14161 chr22 HAVANA exon 24217308 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000489322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-007"; exon_number 4; exon_id "ENSE00003681951.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320022.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14162 chr22 HAVANA exon 24219229 24219358 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000489322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-007"; exon_number 5; exon_id "ENSE00003683150.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320022.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14163 chr22 HAVANA exon 24224646 24224833 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000489322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-007"; exon_number 6; exon_id "ENSE00003519561.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320022.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14164 chr22 HAVANA exon 24224946 24225056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000489322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-007"; exon_number 7; exon_id "ENSE00003498279.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320022.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14165 chr22 HAVANA exon 24225959 24226616 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000489322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-007"; exon_number 8; exon_id "ENSE00001879362.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320022.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14166 chr22 HAVANA exon 24226836 24227738 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000489322.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-007"; exon_number 9; exon_id "ENSE00001951165.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320022.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14167 chr22 HAVANA transcript 24199149 24208993 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000440493.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-023"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320038.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14168 chr22 HAVANA exon 24199149 24199178 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000440493.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-023"; exon_number 1; exon_id "ENSE00001800012.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320038.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14169 chr22 HAVANA exon 24199608 24199718 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000440493.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-023"; exon_number 2; exon_id "ENSE00003479068.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320038.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14170 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000440493.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-023"; exon_number 3; exon_id "ENSE00003637377.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320038.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14171 chr22 HAVANA exon 24208610 24208993 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000440493.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-023"; exon_number 4; exon_id "ENSE00001735013.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320038.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14172 chr22 HAVANA transcript 24199187 24217398 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000473740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-013"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320028.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14173 chr22 HAVANA exon 24199187 24199718 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000473740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-013"; exon_number 1; exon_id "ENSE00002725157.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320028.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14174 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000473740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-013"; exon_number 2; exon_id "ENSE00003637377.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320028.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14175 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000473740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-013"; exon_number 3; exon_id "ENSE00003556728.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320028.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14176 chr22 HAVANA exon 24217304 24217398 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000473740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-013"; exon_number 4; exon_id "ENSE00001880337.1"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320028.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14177 chr22 HAVANA transcript 24199523 24204512 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000492516.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-021"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320036.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14178 chr22 HAVANA exon 24199523 24199718 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000492516.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-021"; exon_number 1; exon_id "ENSE00001947632.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320036.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14179 chr22 HAVANA exon 24204291 24204512 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000492516.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-021"; exon_number 2; exon_id "ENSE00001845175.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320036.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14180 chr22 HAVANA transcript 24199604 24219474 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14181 chr22 HAVANA exon 24199604 24199718 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; exon_number 1; exon_id "ENSE00001743421.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14182 chr22 HAVANA CDS 24199677 24199718 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; exon_number 1; exon_id "ENSE00001743421.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14183 chr22 HAVANA start_codon 24199677 24199679 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; exon_number 1; exon_id "ENSE00001743421.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14184 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14185 chr22 HAVANA CDS 24204291 24204389 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14186 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; exon_number 3; exon_id "ENSE00003682329.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14187 chr22 HAVANA CDS 24210668 24210828 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; exon_number 3; exon_id "ENSE00003682329.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14188 chr22 HAVANA exon 24217308 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; exon_number 4; exon_id "ENSE00003650906.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14189 chr22 HAVANA CDS 24217308 24217320 . + 1 gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; exon_number 4; exon_id "ENSE00003650906.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14190 chr22 HAVANA stop_codon 24217321 24217323 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; exon_number 4; exon_id "ENSE00003650906.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14191 chr22 HAVANA exon 24219229 24219474 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; exon_number 5; exon_id "ENSE00001787361.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14192 chr22 HAVANA UTR 24199604 24199676 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14193 chr22 HAVANA UTR 24217321 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14194 chr22 HAVANA UTR 24219229 24219474 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000423972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-022"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320037.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14195 chr22 HAVANA transcript 24199658 24217376 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14196 chr22 HAVANA exon 24199658 24199718 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; exon_number 1; exon_id "ENSE00001532890.2"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14197 chr22 HAVANA CDS 24199677 24199718 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; exon_number 1; exon_id "ENSE00001532890.2"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14198 chr22 HAVANA start_codon 24199677 24199679 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; exon_number 1; exon_id "ENSE00001532890.2"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14199 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14200 chr22 HAVANA CDS 24204291 24204389 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14201 chr22 HAVANA exon 24209922 24210086 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; exon_number 3; exon_id "ENSE00001602553.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14202 chr22 HAVANA CDS 24209922 24209924 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; exon_number 3; exon_id "ENSE00001602553.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14203 chr22 HAVANA stop_codon 24209925 24209927 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; exon_number 3; exon_id "ENSE00001602553.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14204 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; exon_number 4; exon_id "ENSE00003556728.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14205 chr22 HAVANA exon 24217304 24217376 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; exon_number 5; exon_id "ENSE00001739357.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14206 chr22 HAVANA UTR 24199658 24199676 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14207 chr22 HAVANA UTR 24209925 24210086 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14208 chr22 HAVANA UTR 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14209 chr22 HAVANA UTR 24217304 24217376 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000418102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-015"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320030.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14210 chr22 HAVANA transcript 24200062 24210983 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000491948.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-016"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320031.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14211 chr22 HAVANA exon 24200062 24200216 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000491948.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-016"; exon_number 1; exon_id "ENSE00001738321.2"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320031.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14212 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000491948.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-016"; exon_number 2; exon_id "ENSE00003637377.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320031.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14213 chr22 HAVANA exon 24210668 24210983 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000491948.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-016"; exon_number 3; exon_id "ENSE00001895562.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320031.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14214 chr22 HAVANA transcript 24200082 24219359 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14215 chr22 HAVANA exon 24200082 24200216 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; exon_number 1; exon_id "ENSE00001406173.3"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14216 chr22 HAVANA CDS 24200187 24200216 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; exon_number 1; exon_id "ENSE00001406173.3"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14217 chr22 HAVANA start_codon 24200187 24200189 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; exon_number 1; exon_id "ENSE00001406173.3"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14218 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14219 chr22 HAVANA CDS 24204291 24204389 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14220 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; exon_number 3; exon_id "ENSE00003682329.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14221 chr22 HAVANA CDS 24210668 24210828 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; exon_number 3; exon_id "ENSE00003682329.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14222 chr22 HAVANA exon 24217272 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; exon_number 4; exon_id "ENSE00001700757.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14223 chr22 HAVANA CDS 24217272 24217320 . + 1 gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; exon_number 4; exon_id "ENSE00001700757.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14224 chr22 HAVANA stop_codon 24217321 24217323 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; exon_number 4; exon_id "ENSE00001700757.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14225 chr22 HAVANA exon 24219229 24219359 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; exon_number 5; exon_id "ENSE00001722356.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14226 chr22 HAVANA UTR 24200082 24200186 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14227 chr22 HAVANA UTR 24217321 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14228 chr22 HAVANA UTR 24219229 24219359 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000436643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-017"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320032.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14229 chr22 HAVANA transcript 24200106 24227740 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14230 chr22 HAVANA exon 24200106 24200343 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 1; exon_id "ENSE00001616216.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14231 chr22 HAVANA CDS 24200323 24200343 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 1; exon_id "ENSE00001616216.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14232 chr22 HAVANA start_codon 24200323 24200325 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 1; exon_id "ENSE00001616216.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14233 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14234 chr22 HAVANA CDS 24204291 24204389 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14235 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 3; exon_id "ENSE00003682329.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14236 chr22 HAVANA CDS 24210668 24210828 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 3; exon_id "ENSE00003682329.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14237 chr22 HAVANA exon 24217304 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 4; exon_id "ENSE00003674675.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14238 chr22 HAVANA CDS 24217304 24217428 . + 1 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 4; exon_id "ENSE00003674675.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14239 chr22 HAVANA exon 24219229 24219358 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 5; exon_id "ENSE00003580882.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14240 chr22 HAVANA CDS 24219229 24219358 . + 2 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 5; exon_id "ENSE00003580882.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14241 chr22 HAVANA exon 24219572 24220056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 6; exon_id "ENSE00001682228.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14242 chr22 HAVANA CDS 24219572 24219701 . + 1 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 6; exon_id "ENSE00001682228.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14243 chr22 HAVANA stop_codon 24219702 24219704 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 6; exon_id "ENSE00001682228.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14244 chr22 HAVANA exon 24224646 24224833 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 7; exon_id "ENSE00003519561.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14245 chr22 HAVANA exon 24224946 24225056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 8; exon_id "ENSE00003498279.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14246 chr22 HAVANA exon 24225959 24226060 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 9; exon_id "ENSE00003496790.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14247 chr22 HAVANA exon 24226136 24226211 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 10; exon_id "ENSE00003528988.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14248 chr22 HAVANA exon 24226489 24226616 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 11; exon_id "ENSE00003459104.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14249 chr22 HAVANA exon 24226836 24227740 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; exon_number 12; exon_id "ENSE00001625810.1"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14250 chr22 HAVANA UTR 24200106 24200322 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14251 chr22 HAVANA UTR 24219702 24220056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14252 chr22 HAVANA UTR 24224646 24224833 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14253 chr22 HAVANA UTR 24224946 24225056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14254 chr22 HAVANA UTR 24225959 24226060 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14255 chr22 HAVANA UTR 24226136 24226211 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14256 chr22 HAVANA UTR 24226489 24226616 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14257 chr22 HAVANA UTR 24226836 24227740 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000405340.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SLC2A11-003"; level 2; tag "not_organism_supported"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320018.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14258 chr22 HAVANA transcript 24200148 24227723 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000461809.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-008"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320023.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14259 chr22 HAVANA exon 24200148 24200216 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000461809.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-008"; exon_number 1; exon_id "ENSE00001827643.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320023.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14260 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000461809.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-008"; exon_number 2; exon_id "ENSE00003637377.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320023.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14261 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000461809.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-008"; exon_number 3; exon_id "ENSE00003556728.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320023.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14262 chr22 HAVANA exon 24217304 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000461809.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-008"; exon_number 4; exon_id "ENSE00003673633.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320023.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14263 chr22 HAVANA exon 24219229 24219358 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000461809.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-008"; exon_number 5; exon_id "ENSE00003683150.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320023.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14264 chr22 HAVANA exon 24224646 24224833 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000461809.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-008"; exon_number 6; exon_id "ENSE00003519561.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320023.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14265 chr22 HAVANA exon 24224946 24226211 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000461809.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-008"; exon_number 7; exon_id "ENSE00001956958.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320023.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14266 chr22 HAVANA exon 24226489 24226616 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000461809.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-008"; exon_number 8; exon_id "ENSE00003459104.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320023.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14267 chr22 HAVANA exon 24226836 24227723 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000461809.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-008"; exon_number 9; exon_id "ENSE00003536769.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320023.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14268 chr22 HAVANA transcript 24200150 24227054 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14269 chr22 HAVANA exon 24200150 24200216 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 1; exon_id "ENSE00001822292.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14270 chr22 HAVANA CDS 24200187 24200216 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 1; exon_id "ENSE00001822292.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14271 chr22 HAVANA start_codon 24200187 24200189 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 1; exon_id "ENSE00001822292.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14272 chr22 HAVANA exon 24204291 24204389 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14273 chr22 HAVANA CDS 24204291 24204389 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 2; exon_id "ENSE00003629303.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14274 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 3; exon_id "ENSE00003682329.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14275 chr22 HAVANA CDS 24210668 24210828 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 3; exon_id "ENSE00003682329.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14276 chr22 HAVANA exon 24217304 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 4; exon_id "ENSE00003674675.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14277 chr22 HAVANA CDS 24217304 24217428 . + 1 gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 4; exon_id "ENSE00003674675.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14278 chr22 HAVANA exon 24219229 24219358 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 5; exon_id "ENSE00003580882.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14279 chr22 HAVANA CDS 24219229 24219358 . + 2 gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 5; exon_id "ENSE00003580882.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14280 chr22 HAVANA exon 24219908 24220056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 6; exon_id "ENSE00003500933.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14281 chr22 HAVANA CDS 24219908 24220056 . + 1 gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 6; exon_id "ENSE00003500933.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14282 chr22 HAVANA exon 24224646 24224833 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 7; exon_id "ENSE00003577221.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14283 chr22 HAVANA CDS 24224646 24224833 . + 2 gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 7; exon_id "ENSE00003577221.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14284 chr22 HAVANA exon 24224946 24225056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 8; exon_id "ENSE00003612609.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14285 chr22 HAVANA CDS 24224946 24225056 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 8; exon_id "ENSE00003612609.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14286 chr22 HAVANA exon 24225959 24226060 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 9; exon_id "ENSE00003549447.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14287 chr22 HAVANA CDS 24225959 24226060 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 9; exon_id "ENSE00003549447.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14288 chr22 HAVANA exon 24226136 24226211 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 10; exon_id "ENSE00003502128.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14289 chr22 HAVANA CDS 24226136 24226211 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 10; exon_id "ENSE00003502128.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14290 chr22 HAVANA exon 24226489 24226616 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 11; exon_id "ENSE00003553444.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14291 chr22 HAVANA CDS 24226489 24226616 . + 2 gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 11; exon_id "ENSE00003553444.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14292 chr22 HAVANA exon 24226836 24227054 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 12; exon_id "ENSE00001832956.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14293 chr22 HAVANA CDS 24226836 24227033 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 12; exon_id "ENSE00001832956.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14294 chr22 HAVANA stop_codon 24227034 24227036 . + 0 gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; exon_number 12; exon_id "ENSE00001832956.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14295 chr22 HAVANA UTR 24200150 24200186 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14296 chr22 HAVANA UTR 24227034 24227054 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000316185.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC2A11-004"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS33616.1"; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320019.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14297 chr22 HAVANA transcript 24217347 24225139 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000482576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-019"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14298 chr22 HAVANA exon 24217347 24217428 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000482576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-019"; exon_number 1; exon_id "ENSE00001957275.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14299 chr22 HAVANA exon 24219229 24219358 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000482576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-019"; exon_number 2; exon_id "ENSE00003683150.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14300 chr22 HAVANA exon 24224682 24224833 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000482576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-019"; exon_number 3; exon_id "ENSE00001824736.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14301 chr22 HAVANA exon 24224946 24225139 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000482576.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-019"; exon_number 4; exon_id "ENSE00001879427.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320034.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14302 chr22 HAVANA transcript 24220045 24226971 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000472526.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-020"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14303 chr22 HAVANA exon 24220045 24220056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000472526.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-020"; exon_number 1; exon_id "ENSE00001930520.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14304 chr22 HAVANA exon 24224646 24224833 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000472526.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-020"; exon_number 2; exon_id "ENSE00003519561.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14305 chr22 HAVANA exon 24224946 24225056 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000472526.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-020"; exon_number 3; exon_id "ENSE00003498279.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14306 chr22 HAVANA exon 24226136 24226211 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000472526.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-020"; exon_number 4; exon_id "ENSE00003528988.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14307 chr22 HAVANA exon 24226489 24226616 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000472526.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-020"; exon_number 5; exon_id "ENSE00003459104.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14308 chr22 HAVANA exon 24226836 24226971 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000472526.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC2A11-020"; exon_number 6; exon_id "ENSE00001935509.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320035.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14309 chr22 HAVANA transcript 24222596 24225494 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000473357.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-009"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320024.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14310 chr22 HAVANA exon 24222596 24224833 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000473357.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-009"; exon_number 1; exon_id "ENSE00001822318.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320024.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14311 chr22 HAVANA exon 24224946 24225494 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000473357.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-009"; exon_number 2; exon_id "ENSE00001952306.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320024.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14312 chr22 HAVANA transcript 24225147 24227723 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000486907.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-010"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320025.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14313 chr22 HAVANA exon 24225147 24226616 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000486907.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-010"; exon_number 1; exon_id "ENSE00001840567.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320025.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14314 chr22 HAVANA exon 24226836 24227723 . + . gene_id "ENSG00000133460.15"; transcript_id "ENST00000486907.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC2A11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC2A11-010"; exon_number 2; exon_id "ENSE00003536769.1"; level 2; havana_gene "OTTHUMG00000166469.2"; havana_transcript "OTTHUMT00000320025.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14315 chr22 HAVANA gene 24204375 24237410 . + . gene_id "ENSG00000251357.4"; transcript_id "ENSG00000251357.4"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10"; level 2; havana_gene "OTTHUMG00000150787.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14316 chr22 HAVANA transcript 24204375 24237410 . + . gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14317 chr22 HAVANA exon 24204375 24204389 . + . gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; exon_number 1; exon_id "ENSE00002143041.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14318 chr22 HAVANA CDS 24204375 24204389 . + 0 gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; exon_number 1; exon_id "ENSE00002143041.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14319 chr22 HAVANA exon 24210668 24210828 . + . gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; exon_number 2; exon_id "ENSE00003682782.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14320 chr22 HAVANA CDS 24210668 24210828 . + 0 gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; exon_number 2; exon_id "ENSE00003682782.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14321 chr22 HAVANA exon 24217304 24217428 . + . gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; exon_number 3; exon_id "ENSE00003549722.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14322 chr22 HAVANA CDS 24217304 24217428 . + 1 gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; exon_number 3; exon_id "ENSE00003549722.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14323 chr22 HAVANA exon 24219229 24219358 . + . gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; exon_number 4; exon_id "ENSE00003579171.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14324 chr22 HAVANA CDS 24219229 24219358 . + 2 gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; exon_number 4; exon_id "ENSE00003579171.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14325 chr22 HAVANA exon 24236959 24237131 . + . gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; exon_number 5; exon_id "ENSE00003649242.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14326 chr22 HAVANA CDS 24236959 24237131 . + 1 gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; exon_number 5; exon_id "ENSE00003649242.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14327 chr22 HAVANA exon 24237227 24237410 . + . gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; exon_number 6; exon_id "ENSE00003656567.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14328 chr22 HAVANA CDS 24237227 24237249 . + 2 gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; exon_number 6; exon_id "ENSE00003656567.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14329 chr22 HAVANA stop_codon 24237250 24237252 . + 0 gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; exon_number 6; exon_id "ENSE00003656567.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14330 chr22 HAVANA UTR 24237250 24237410 . + . gene_id "ENSG00000251357.4"; transcript_id "ENST00000433835.3"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.10-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150787.3"; havana_transcript "OTTHUMT00000334403.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14331 chr22 ENSEMBL gene 24221682 24221977 . - . gene_id "ENSG00000244425.2"; transcript_id "ENSG00000244425.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL268P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL268P"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14332 chr22 ENSEMBL transcript 24221682 24221977 . - . gene_id "ENSG00000244425.2"; transcript_id "ENST00000491172.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL268P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL268P-201"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14333 chr22 ENSEMBL exon 24221682 24221977 . - . gene_id "ENSG00000244425.2"; transcript_id "ENST00000491172.2"; gene_type "misc_RNA"; gene_status "KNOWN"; gene_name "RN7SL268P"; transcript_type "misc_RNA"; transcript_status "KNOWN"; transcript_name "RN7SL268P-201"; exon_number 1; exon_id "ENSE00001947833.2"; level 3; tag "basic";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14334 chr22 HAVANA gene 24236191 24237414 . + . gene_id "ENSG00000240972.1"; transcript_id "ENSG00000240972.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MIF"; level 2; havana_gene "OTTHUMG00000150773.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14335 chr22 HAVANA transcript 24236191 24237413 . + . gene_id "ENSG00000240972.1"; transcript_id "ENST00000215754.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MIF-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13819.1"; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14336 chr22 HAVANA exon 24236191 24236769 . + . gene_id "ENSG00000240972.1"; transcript_id "ENST00000215754.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MIF-001"; exon_number 1; exon_id "ENSE00001922200.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13819.1"; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14337 chr22 HAVANA CDS 24236662 24236769 . + 0 gene_id "ENSG00000240972.1"; transcript_id "ENST00000215754.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MIF-001"; exon_number 1; exon_id "ENSE00001922200.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13819.1"; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14338 chr22 HAVANA start_codon 24236662 24236664 . + 0 gene_id "ENSG00000240972.1"; transcript_id "ENST00000215754.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MIF-001"; exon_number 1; exon_id "ENSE00001922200.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13819.1"; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14339 chr22 HAVANA exon 24236959 24237131 . + . gene_id "ENSG00000240972.1"; transcript_id "ENST00000215754.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MIF-001"; exon_number 2; exon_id "ENSE00003694118.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13819.1"; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14340 chr22 HAVANA CDS 24236959 24237131 . + 0 gene_id "ENSG00000240972.1"; transcript_id "ENST00000215754.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MIF-001"; exon_number 2; exon_id "ENSE00003694118.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13819.1"; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14341 chr22 HAVANA exon 24237227 24237413 . + . gene_id "ENSG00000240972.1"; transcript_id "ENST00000215754.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MIF-001"; exon_number 3; exon_id "ENSE00001839840.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13819.1"; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14342 chr22 HAVANA CDS 24237227 24237290 . + 1 gene_id "ENSG00000240972.1"; transcript_id "ENST00000215754.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MIF-001"; exon_number 3; exon_id "ENSE00001839840.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13819.1"; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14343 chr22 HAVANA stop_codon 24237291 24237293 . + 0 gene_id "ENSG00000240972.1"; transcript_id "ENST00000215754.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MIF-001"; exon_number 3; exon_id "ENSE00001839840.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13819.1"; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14344 chr22 HAVANA UTR 24236191 24236661 . + . gene_id "ENSG00000240972.1"; transcript_id "ENST00000215754.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MIF-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13819.1"; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14345 chr22 HAVANA UTR 24237291 24237413 . + . gene_id "ENSG00000240972.1"; transcript_id "ENST00000215754.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MIF-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13819.1"; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320009.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14346 chr22 HAVANA transcript 24236637 24237414 . + . gene_id "ENSG00000240972.1"; transcript_id "ENST00000465752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MIF-002"; level 2; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14347 chr22 HAVANA exon 24236637 24236769 . + . gene_id "ENSG00000240972.1"; transcript_id "ENST00000465752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MIF-002"; exon_number 1; exon_id "ENSE00001153306.10"; level 2; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14348 chr22 HAVANA exon 24236959 24237414 . + . gene_id "ENSG00000240972.1"; transcript_id "ENST00000465752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MIF-002"; exon_number 2; exon_id "ENSE00001881212.1"; level 2; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320010.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14349 chr22 HAVANA transcript 24236885 24237414 . + . gene_id "ENSG00000240972.1"; transcript_id "ENST00000498385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MIF-003"; level 2; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320011.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14350 chr22 HAVANA exon 24236885 24237131 . + . gene_id "ENSG00000240972.1"; transcript_id "ENST00000498385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MIF-003"; exon_number 1; exon_id "ENSE00001867185.1"; level 2; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320011.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14351 chr22 HAVANA exon 24237227 24237414 . + . gene_id "ENSG00000240972.1"; transcript_id "ENST00000498385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIF"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MIF-003"; exon_number 2; exon_id "ENSE00001924649.1"; level 2; havana_gene "OTTHUMG00000150773.2"; havana_transcript "OTTHUMT00000320011.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14352 chr22 HAVANA gene 24236613 24241117 . - . gene_id "ENSG00000218537.1"; transcript_id "ENSG00000218537.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.4"; level 2; havana_gene "OTTHUMG00000150772.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14353 chr22 HAVANA transcript 24236613 24241117 . - . gene_id "ENSG00000218537.1"; transcript_id "ENST00000406213.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.4-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150772.2"; havana_transcript "OTTHUMT00000320008.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14354 chr22 HAVANA exon 24241031 24241117 . - . gene_id "ENSG00000218537.1"; transcript_id "ENST00000406213.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.4-001"; exon_number 1; exon_id "ENSE00001557423.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150772.2"; havana_transcript "OTTHUMT00000320008.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14355 chr22 HAVANA exon 24238016 24238297 . - . gene_id "ENSG00000218537.1"; transcript_id "ENST00000406213.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.4-001"; exon_number 2; exon_id "ENSE00001562568.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150772.2"; havana_transcript "OTTHUMT00000320008.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14356 chr22 HAVANA CDS 24238016 24238100 . - 0 gene_id "ENSG00000218537.1"; transcript_id "ENST00000406213.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.4-001"; exon_number 2; exon_id "ENSE00001562568.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150772.2"; havana_transcript "OTTHUMT00000320008.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14357 chr22 HAVANA start_codon 24238098 24238100 . - 0 gene_id "ENSG00000218537.1"; transcript_id "ENST00000406213.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.4-001"; exon_number 2; exon_id "ENSE00001562568.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150772.2"; havana_transcript "OTTHUMT00000320008.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14358 chr22 HAVANA exon 24236613 24237719 . - . gene_id "ENSG00000218537.1"; transcript_id "ENST00000406213.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.4-001"; exon_number 3; exon_id "ENSE00001548415.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150772.2"; havana_transcript "OTTHUMT00000320008.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14359 chr22 HAVANA CDS 24237238 24237719 . - 2 gene_id "ENSG00000218537.1"; transcript_id "ENST00000406213.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.4-001"; exon_number 3; exon_id "ENSE00001548415.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150772.2"; havana_transcript "OTTHUMT00000320008.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14360 chr22 HAVANA stop_codon 24237235 24237237 . - 0 gene_id "ENSG00000218537.1"; transcript_id "ENST00000406213.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.4-001"; exon_number 3; exon_id "ENSE00001548415.1"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150772.2"; havana_transcript "OTTHUMT00000320008.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14361 chr22 HAVANA UTR 24241031 24241117 . - . gene_id "ENSG00000218537.1"; transcript_id "ENST00000406213.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.4-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150772.2"; havana_transcript "OTTHUMT00000320008.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14362 chr22 HAVANA UTR 24238101 24238297 . - . gene_id "ENSG00000218537.1"; transcript_id "ENST00000406213.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.4-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150772.2"; havana_transcript "OTTHUMT00000320008.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14363 chr22 HAVANA UTR 24236613 24237237 . - . gene_id "ENSG00000218537.1"; transcript_id "ENST00000406213.1"; gene_type "protein_coding"; gene_status "PUTATIVE"; gene_name "AP000350.4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000350.4-001"; level 2; tag "basic"; tag "appris_principal"; havana_gene "OTTHUMG00000150772.2"; havana_transcript "OTTHUMT00000320008.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14364 chr22 HAVANA gene 24243619 24249255 . - . gene_id "ENSG00000273295.1"; transcript_id "ENSG00000273295.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000350.5"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AP000350.5"; level 2; havana_gene "OTTHUMG00000150777.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14365 chr22 HAVANA transcript 24243619 24249255 . - . gene_id "ENSG00000273295.1"; transcript_id "ENST00000609510.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000350.5"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000350.5-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150777.2"; havana_transcript "OTTHUMT00000320041.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14366 chr22 HAVANA exon 24243619 24249255 . - . gene_id "ENSG00000273295.1"; transcript_id "ENST00000609510.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000350.5"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000350.5-001"; exon_number 1; exon_id "ENSE00003707953.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150777.2"; havana_transcript "OTTHUMT00000320041.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14367 chr22 HAVANA gene 24269087 24271761 . + . gene_id "ENSG00000225282.1"; transcript_id "ENSG00000225282.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.6"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.6"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150775.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14368 chr22 HAVANA transcript 24269087 24271761 . + . gene_id "ENSG00000225282.1"; transcript_id "ENST00000439492.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.6-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150775.1"; havana_transcript "OTTHUMT00000320039.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14369 chr22 HAVANA exon 24269087 24269516 . + . gene_id "ENSG00000225282.1"; transcript_id "ENST00000439492.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.6-001"; exon_number 1; exon_id "ENSE00001727435.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150775.1"; havana_transcript "OTTHUMT00000320039.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14370 chr22 HAVANA exon 24269814 24270785 . + . gene_id "ENSG00000225282.1"; transcript_id "ENST00000439492.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.6-001"; exon_number 2; exon_id "ENSE00001712984.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150775.1"; havana_transcript "OTTHUMT00000320039.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14371 chr22 HAVANA exon 24271401 24271761 . + . gene_id "ENSG00000225282.1"; transcript_id "ENST00000439492.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.6-001"; exon_number 3; exon_id "ENSE00001642833.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150775.1"; havana_transcript "OTTHUMT00000320039.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14372 chr22 HAVANA gene 24282185 24284985 . + . gene_id "ENSG00000206090.4"; transcript_id "ENSG00000206090.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.7"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.7"; level 2; havana_gene "OTTHUMG00000150771.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14373 chr22 HAVANA transcript 24282185 24284985 . + . gene_id "ENSG00000206090.4"; transcript_id "ENST00000443377.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.7-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150771.1"; havana_transcript "OTTHUMT00000320007.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14374 chr22 HAVANA exon 24282185 24282338 . + . gene_id "ENSG00000206090.4"; transcript_id "ENST00000443377.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.7-001"; exon_number 1; exon_id "ENSE00001730509.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150771.1"; havana_transcript "OTTHUMT00000320007.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14375 chr22 HAVANA exon 24283259 24283438 . + . gene_id "ENSG00000206090.4"; transcript_id "ENST00000443377.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.7-001"; exon_number 2; exon_id "ENSE00001748328.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150771.1"; havana_transcript "OTTHUMT00000320007.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14376 chr22 HAVANA exon 24284788 24284985 . + . gene_id "ENSG00000206090.4"; transcript_id "ENST00000443377.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.7"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.7-001"; exon_number 3; exon_id "ENSE00001687805.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150771.1"; havana_transcript "OTTHUMT00000320007.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14377 chr22 HAVANA gene 24292105 24296229 . + . gene_id "ENSG00000231271.1"; transcript_id "ENSG00000231271.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.8"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.8"; level 2; havana_gene "OTTHUMG00000150776.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14378 chr22 HAVANA transcript 24292105 24296229 . + . gene_id "ENSG00000231271.1"; transcript_id "ENST00000440099.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.8"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.8-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150776.1"; havana_transcript "OTTHUMT00000320040.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14379 chr22 HAVANA exon 24292105 24292192 . + . gene_id "ENSG00000231271.1"; transcript_id "ENST00000440099.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.8"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.8-001"; exon_number 1; exon_id "ENSE00001670449.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150776.1"; havana_transcript "OTTHUMT00000320040.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14380 chr22 HAVANA exon 24294361 24294405 . + . gene_id "ENSG00000231271.1"; transcript_id "ENST00000440099.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.8"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.8-001"; exon_number 2; exon_id "ENSE00001622170.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150776.1"; havana_transcript "OTTHUMT00000320040.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14381 chr22 HAVANA exon 24296074 24296229 . + . gene_id "ENSG00000231271.1"; transcript_id "ENST00000440099.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000350.8"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000350.8-001"; exon_number 3; exon_id "ENSE00001760788.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150776.1"; havana_transcript "OTTHUMT00000320040.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14382 chr22 HAVANA gene 24299601 24303373 . - . gene_id "ENSG00000133433.6"; transcript_id "ENSG00000133433.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B"; level 2; havana_gene "OTTHUMG00000150774.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14383 chr22 HAVANA transcript 24299601 24303373 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14384 chr22 HAVANA exon 24303207 24303373 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; exon_number 1; exon_id "ENSE00001833725.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14385 chr22 HAVANA CDS 24303207 24303318 . - 0 gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; exon_number 1; exon_id "ENSE00001833725.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14386 chr22 HAVANA start_codon 24303316 24303318 . - 0 gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; exon_number 1; exon_id "ENSE00001833725.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14387 chr22 HAVANA exon 24302481 24302568 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; exon_number 2; exon_id "ENSE00001749600.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14388 chr22 HAVANA CDS 24302481 24302568 . - 2 gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; exon_number 2; exon_id "ENSE00001749600.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14389 chr22 HAVANA exon 24300738 24300888 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; exon_number 3; exon_id "ENSE00001734445.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14390 chr22 HAVANA CDS 24300738 24300888 . - 1 gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; exon_number 3; exon_id "ENSE00001734445.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14391 chr22 HAVANA exon 24300472 24300645 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; exon_number 4; exon_id "ENSE00001727999.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14392 chr22 HAVANA CDS 24300472 24300645 . - 0 gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; exon_number 4; exon_id "ENSE00001727999.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14393 chr22 HAVANA exon 24299601 24300119 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; exon_number 5; exon_id "ENSE00001883656.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14394 chr22 HAVANA CDS 24299913 24300119 . - 0 gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; exon_number 5; exon_id "ENSE00001883656.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14395 chr22 HAVANA stop_codon 24299910 24299912 . - 0 gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; exon_number 5; exon_id "ENSE00001883656.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14396 chr22 HAVANA UTR 24303319 24303373 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14397 chr22 HAVANA UTR 24299601 24299912 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000290765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33617.1"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320012.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14398 chr22 HAVANA transcript 24299806 24303340 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14399 chr22 HAVANA exon 24303207 24303340 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; exon_number 1; exon_id "ENSE00001890133.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14400 chr22 HAVANA CDS 24303207 24303318 . - 0 gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; exon_number 1; exon_id "ENSE00001890133.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14401 chr22 HAVANA start_codon 24303316 24303318 . - 0 gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; exon_number 1; exon_id "ENSE00001890133.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14402 chr22 HAVANA exon 24302481 24302568 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; exon_number 2; exon_id "ENSE00001749600.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14403 chr22 HAVANA CDS 24302481 24302568 . - 2 gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; exon_number 2; exon_id "ENSE00001749600.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14404 chr22 HAVANA exon 24300738 24300888 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; exon_number 3; exon_id "ENSE00001734445.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14405 chr22 HAVANA CDS 24300738 24300888 . - 1 gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; exon_number 3; exon_id "ENSE00001734445.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14406 chr22 HAVANA exon 24300514 24300645 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; exon_number 4; exon_id "ENSE00001733822.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14407 chr22 HAVANA CDS 24300514 24300645 . - 0 gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; exon_number 4; exon_id "ENSE00001733822.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14408 chr22 HAVANA exon 24299806 24300119 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; exon_number 5; exon_id "ENSE00001904844.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14409 chr22 HAVANA CDS 24299913 24300119 . - 0 gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; exon_number 5; exon_id "ENSE00001904844.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14410 chr22 HAVANA stop_codon 24299910 24299912 . - 0 gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; exon_number 5; exon_id "ENSE00001904844.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14411 chr22 HAVANA UTR 24303319 24303340 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14412 chr22 HAVANA UTR 24299806 24299912 . - . gene_id "ENSG00000133433.6"; transcript_id "ENST00000404172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2B-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150774.1"; havana_transcript "OTTHUMT00000320013.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14413 chr22 HAVANA gene 24305942 24306644 . + . gene_id "ENSG00000228039.2"; transcript_id "ENSG00000228039.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1125A3.10"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1125A3.10"; level 2; havana_gene "OTTHUMG00000166616.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14414 chr22 ENSEMBL transcript 24305942 24306644 . + . gene_id "ENSG00000228039.2"; transcript_id "ENST00000542932.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1125A3.10"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1125A3.10-201"; level 3; havana_gene "OTTHUMG00000166616.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14415 chr22 ENSEMBL exon 24305942 24306152 . + . gene_id "ENSG00000228039.2"; transcript_id "ENST00000542932.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1125A3.10"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1125A3.10-201"; exon_number 1; exon_id "ENSE00002247759.1"; level 3; havana_gene "OTTHUMG00000166616.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14416 chr22 ENSEMBL exon 24306481 24306644 . + . gene_id "ENSG00000228039.2"; transcript_id "ENST00000542932.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1125A3.10"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1125A3.10-201"; exon_number 2; exon_id "ENSE00002241766.1"; level 3; havana_gene "OTTHUMG00000166616.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14417 chr22 HAVANA transcript 24305967 24306561 . + . gene_id "ENSG00000228039.2"; transcript_id "ENST00000423307.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1125A3.10"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1125A3.10-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000166616.1"; havana_transcript "OTTHUMT00000390860.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14418 chr22 HAVANA exon 24305967 24306105 . + . gene_id "ENSG00000228039.2"; transcript_id "ENST00000423307.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1125A3.10"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1125A3.10-001"; exon_number 1; exon_id "ENSE00001603429.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000166616.1"; havana_transcript "OTTHUMT00000390860.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14419 chr22 HAVANA exon 24306447 24306561 . + . gene_id "ENSG00000228039.2"; transcript_id "ENST00000423307.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KB-1125A3.10"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KB-1125A3.10-001"; exon_number 2; exon_id "ENSE00001699748.1"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000166616.1"; havana_transcript "OTTHUMT00000390860.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14420 chr22 HAVANA gene 24309089 24314721 . + . gene_id "ENSG00000099974.7"; transcript_id "ENSG00000099974.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDTL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDTL"; level 2; havana_gene "OTTHUMG00000150800.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14421 chr22 HAVANA transcript 24309089 24314721 . + . gene_id "ENSG00000099974.7"; transcript_id "ENST00000215770.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDTL"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DDTL-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42988.1"; havana_gene "OTTHUMG00000150800.1"; havana_transcript "OTTHUMT00000320142.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14422 chr22 HAVANA exon 24309089 24309210 . + . gene_id "ENSG00000099974.7"; transcript_id "ENST00000215770.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDTL"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DDTL-001"; exon_number 1; exon_id "ENSE00001661823.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42988.1"; havana_gene "OTTHUMG00000150800.1"; havana_transcript "OTTHUMT00000320142.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14423 chr22 HAVANA CDS 24309103 24309210 . + 0 gene_id "ENSG00000099974.7"; transcript_id "ENST00000215770.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDTL"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DDTL-001"; exon_number 1; exon_id "ENSE00001661823.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42988.1"; havana_gene "OTTHUMG00000150800.1"; havana_transcript "OTTHUMT00000320142.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14424 chr22 HAVANA start_codon 24309103 24309105 . + 0 gene_id "ENSG00000099974.7"; transcript_id "ENST00000215770.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDTL"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DDTL-001"; exon_number 1; exon_id "ENSE00001661823.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42988.1"; havana_gene "OTTHUMG00000150800.1"; havana_transcript "OTTHUMT00000320142.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14425 chr22 HAVANA exon 24309574 24309749 . + . gene_id "ENSG00000099974.7"; transcript_id "ENST00000215770.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDTL"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DDTL-001"; exon_number 2; exon_id "ENSE00001678640.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42988.1"; havana_gene "OTTHUMG00000150800.1"; havana_transcript "OTTHUMT00000320142.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14426 chr22 HAVANA CDS 24309574 24309749 . + 0 gene_id "ENSG00000099974.7"; transcript_id "ENST00000215770.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDTL"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DDTL-001"; exon_number 2; exon_id "ENSE00001678640.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42988.1"; havana_gene "OTTHUMG00000150800.1"; havana_transcript "OTTHUMT00000320142.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14427 chr22 HAVANA exon 24313475 24314721 . + . gene_id "ENSG00000099974.7"; transcript_id "ENST00000215770.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDTL"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DDTL-001"; exon_number 3; exon_id "ENSE00001493396.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42988.1"; havana_gene "OTTHUMG00000150800.1"; havana_transcript "OTTHUMT00000320142.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14428 chr22 HAVANA CDS 24313475 24313592 . + 1 gene_id "ENSG00000099974.7"; transcript_id "ENST00000215770.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDTL"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DDTL-001"; exon_number 3; exon_id "ENSE00001493396.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42988.1"; havana_gene "OTTHUMG00000150800.1"; havana_transcript "OTTHUMT00000320142.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14429 chr22 HAVANA stop_codon 24313593 24313595 . + 0 gene_id "ENSG00000099974.7"; transcript_id "ENST00000215770.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDTL"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DDTL-001"; exon_number 3; exon_id "ENSE00001493396.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42988.1"; havana_gene "OTTHUMG00000150800.1"; havana_transcript "OTTHUMT00000320142.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14430 chr22 HAVANA UTR 24309089 24309102 . + . gene_id "ENSG00000099974.7"; transcript_id "ENST00000215770.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDTL"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DDTL-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42988.1"; havana_gene "OTTHUMG00000150800.1"; havana_transcript "OTTHUMT00000320142.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14431 chr22 HAVANA UTR 24313593 24314721 . + . gene_id "ENSG00000099974.7"; transcript_id "ENST00000215770.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDTL"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DDTL-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42988.1"; havana_gene "OTTHUMG00000150800.1"; havana_transcript "OTTHUMT00000320142.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14432 chr22 HAVANA gene 24311400 24312062 . + . gene_id "ENSG00000272787.1"; transcript_id "ENSG00000272787.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-226F1.2"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "KB-226F1.2"; level 2; havana_gene "OTTHUMG00000186175.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14433 chr22 HAVANA transcript 24311400 24312062 . + . gene_id "ENSG00000272787.1"; transcript_id "ENST00000609736.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-226F1.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-226F1.2-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186175.1"; havana_transcript "OTTHUMT00000472362.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14434 chr22 HAVANA exon 24311400 24312062 . + . gene_id "ENSG00000272787.1"; transcript_id "ENST00000609736.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "KB-226F1.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "KB-226F1.2-001"; exon_number 1; exon_id "ENSE00003708799.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186175.1"; havana_transcript "OTTHUMT00000472362.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14435 chr22 HAVANA gene 24313554 24322660 . - . gene_id "ENSG00000099977.9"; transcript_id "ENSG00000099977.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT"; level 2; havana_gene "OTTHUMG00000150798.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14436 chr22 HAVANA transcript 24313554 24316773 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000398344.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320139.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14437 chr22 HAVANA exon 24316496 24316773 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000398344.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-002"; exon_number 1; exon_id "ENSE00001895724.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320139.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14438 chr22 HAVANA CDS 24316496 24316603 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000398344.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-002"; exon_number 1; exon_id "ENSE00001895724.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320139.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14439 chr22 HAVANA start_codon 24316601 24316603 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000398344.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-002"; exon_number 1; exon_id "ENSE00001895724.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320139.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14440 chr22 HAVANA exon 24315957 24316132 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000398344.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-002"; exon_number 2; exon_id "ENSE00001664306.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320139.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14441 chr22 HAVANA CDS 24315957 24316132 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000398344.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-002"; exon_number 2; exon_id "ENSE00001664306.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320139.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14442 chr22 HAVANA exon 24313554 24313812 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000398344.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-002"; exon_number 3; exon_id "ENSE00001552489.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320139.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14443 chr22 HAVANA CDS 24313743 24313812 . - 1 gene_id "ENSG00000099977.9"; transcript_id "ENST00000398344.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-002"; exon_number 3; exon_id "ENSE00001552489.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320139.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14444 chr22 HAVANA stop_codon 24313740 24313742 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000398344.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-002"; exon_number 3; exon_id "ENSE00001552489.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320139.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14445 chr22 HAVANA UTR 24316604 24316773 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000398344.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320139.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14446 chr22 HAVANA UTR 24313554 24313742 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000398344.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320139.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14447 chr22 HAVANA transcript 24313554 24322019 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000350608.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320138.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14448 chr22 HAVANA exon 24321917 24322019 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000350608.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-001"; exon_number 1; exon_id "ENSE00001046462.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320138.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14449 chr22 HAVANA exon 24316496 24316628 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000350608.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-001"; exon_number 2; exon_id "ENSE00003468830.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320138.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14450 chr22 HAVANA CDS 24316496 24316603 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000350608.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-001"; exon_number 2; exon_id "ENSE00003468830.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320138.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14451 chr22 HAVANA start_codon 24316601 24316603 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000350608.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-001"; exon_number 2; exon_id "ENSE00003468830.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320138.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14452 chr22 HAVANA exon 24315957 24316132 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000350608.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-001"; exon_number 3; exon_id "ENSE00001664306.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320138.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14453 chr22 HAVANA CDS 24315957 24316132 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000350608.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-001"; exon_number 3; exon_id "ENSE00001664306.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320138.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14454 chr22 HAVANA exon 24313554 24313812 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000350608.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-001"; exon_number 4; exon_id "ENSE00001552489.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320138.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14455 chr22 HAVANA CDS 24313743 24313812 . - 1 gene_id "ENSG00000099977.9"; transcript_id "ENST00000350608.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-001"; exon_number 4; exon_id "ENSE00001552489.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320138.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14456 chr22 HAVANA stop_codon 24313740 24313742 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000350608.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-001"; exon_number 4; exon_id "ENSE00001552489.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320138.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14457 chr22 HAVANA UTR 24321917 24322019 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000350608.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320138.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14458 chr22 HAVANA UTR 24316604 24316628 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000350608.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320138.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14459 chr22 HAVANA UTR 24313554 24313742 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000350608.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DDT-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13820.1"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320138.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14460 chr22 HAVANA transcript 24313559 24315372 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000428792.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322308.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14461 chr22 HAVANA exon 24315294 24315372 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000428792.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-007"; exon_number 1; exon_id "ENSE00001793207.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322308.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14462 chr22 HAVANA CDS 24315294 24315372 . - 2 gene_id "ENSG00000099977.9"; transcript_id "ENST00000428792.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-007"; exon_number 1; exon_id "ENSE00001793207.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322308.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14463 chr22 HAVANA exon 24313559 24313812 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000428792.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-007"; exon_number 2; exon_id "ENSE00000879495.4"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322308.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14464 chr22 HAVANA CDS 24313743 24313812 . - 1 gene_id "ENSG00000099977.9"; transcript_id "ENST00000428792.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-007"; exon_number 2; exon_id "ENSE00000879495.4"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322308.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14465 chr22 HAVANA stop_codon 24313740 24313742 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000428792.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-007"; exon_number 2; exon_id "ENSE00000879495.4"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322308.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14466 chr22 HAVANA UTR 24313559 24313742 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000428792.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322308.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14467 chr22 HAVANA transcript 24313567 24322660 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14468 chr22 HAVANA exon 24322603 24322660 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; exon_number 1; exon_id "ENSE00001547555.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14469 chr22 HAVANA exon 24319067 24319258 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; exon_number 2; exon_id "ENSE00001557771.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14470 chr22 HAVANA CDS 24319067 24319083 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; exon_number 2; exon_id "ENSE00001557771.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14471 chr22 HAVANA start_codon 24319081 24319083 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; exon_number 2; exon_id "ENSE00001557771.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14472 chr22 HAVANA exon 24316496 24316628 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; exon_number 3; exon_id "ENSE00003634378.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14473 chr22 HAVANA CDS 24316496 24316628 . - 1 gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; exon_number 3; exon_id "ENSE00003634378.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14474 chr22 HAVANA exon 24315957 24316132 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; exon_number 4; exon_id "ENSE00001664306.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14475 chr22 HAVANA CDS 24315957 24316132 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; exon_number 4; exon_id "ENSE00001664306.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14476 chr22 HAVANA exon 24313567 24313812 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; exon_number 5; exon_id "ENSE00001551046.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14477 chr22 HAVANA CDS 24313743 24313812 . - 1 gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; exon_number 5; exon_id "ENSE00001551046.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14478 chr22 HAVANA stop_codon 24313740 24313742 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; exon_number 5; exon_id "ENSE00001551046.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14479 chr22 HAVANA UTR 24322603 24322660 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14480 chr22 HAVANA UTR 24319084 24319258 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14481 chr22 HAVANA UTR 24313567 24313742 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000404092.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000320140.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14482 chr22 HAVANA transcript 24315270 24316680 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000444947.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DDT-004"; level 2; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322305.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14483 chr22 HAVANA exon 24316496 24316680 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000444947.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DDT-004"; exon_number 1; exon_id "ENSE00001608893.1"; level 2; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322305.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14484 chr22 HAVANA exon 24315270 24316132 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000444947.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DDT-004"; exon_number 2; exon_id "ENSE00001884797.1"; level 2; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322305.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14485 chr22 HAVANA transcript 24315293 24316648 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000403754.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322306.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14486 chr22 HAVANA exon 24316496 24316648 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000403754.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-005"; exon_number 1; exon_id "ENSE00001873595.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322306.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14487 chr22 HAVANA CDS 24316496 24316603 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000403754.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-005"; exon_number 1; exon_id "ENSE00001873595.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322306.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14488 chr22 HAVANA start_codon 24316601 24316603 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000403754.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-005"; exon_number 1; exon_id "ENSE00001873595.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322306.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14489 chr22 HAVANA exon 24315957 24316132 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000403754.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-005"; exon_number 2; exon_id "ENSE00001664306.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322306.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14490 chr22 HAVANA CDS 24315957 24316132 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000403754.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-005"; exon_number 2; exon_id "ENSE00001664306.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322306.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14491 chr22 HAVANA exon 24315293 24315532 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000403754.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-005"; exon_number 3; exon_id "ENSE00001899851.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322306.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14492 chr22 HAVANA CDS 24315319 24315532 . - 1 gene_id "ENSG00000099977.9"; transcript_id "ENST00000403754.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-005"; exon_number 3; exon_id "ENSE00001899851.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322306.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14493 chr22 HAVANA stop_codon 24315316 24315318 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000403754.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-005"; exon_number 3; exon_id "ENSE00001899851.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322306.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14494 chr22 HAVANA UTR 24316604 24316648 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000403754.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322306.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14495 chr22 HAVANA UTR 24315293 24315318 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000403754.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-005"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322306.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14496 chr22 HAVANA transcript 24315293 24316648 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000430101.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-006"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322307.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14497 chr22 HAVANA exon 24316496 24316648 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000430101.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-006"; exon_number 1; exon_id "ENSE00001873595.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322307.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14498 chr22 HAVANA CDS 24316496 24316603 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000430101.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-006"; exon_number 1; exon_id "ENSE00001873595.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322307.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14499 chr22 HAVANA start_codon 24316601 24316603 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000430101.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-006"; exon_number 1; exon_id "ENSE00001873595.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322307.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14500 chr22 HAVANA exon 24315957 24316132 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000430101.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-006"; exon_number 2; exon_id "ENSE00001664306.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322307.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14501 chr22 HAVANA CDS 24315957 24316132 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000430101.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-006"; exon_number 2; exon_id "ENSE00001664306.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322307.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14502 chr22 HAVANA exon 24315293 24315536 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000430101.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-006"; exon_number 3; exon_id "ENSE00001901176.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322307.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14503 chr22 HAVANA CDS 24315500 24315536 . - 1 gene_id "ENSG00000099977.9"; transcript_id "ENST00000430101.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-006"; exon_number 3; exon_id "ENSE00001901176.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322307.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14504 chr22 HAVANA stop_codon 24315497 24315499 . - 0 gene_id "ENSG00000099977.9"; transcript_id "ENST00000430101.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-006"; exon_number 3; exon_id "ENSE00001901176.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322307.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14505 chr22 HAVANA UTR 24316604 24316648 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000430101.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-006"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322307.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14506 chr22 HAVANA UTR 24315293 24315499 . - . gene_id "ENSG00000099977.9"; transcript_id "ENST00000430101.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DDT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DDT-006"; level 2; tag "basic"; havana_gene "OTTHUMG00000150798.2"; havana_transcript "OTTHUMT00000322307.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14507 chr22 HAVANA gene 24319095 24319776 . - . gene_id "ENSG00000250470.1"; transcript_id "ENSG00000250470.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.3"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.3"; level 2; havana_gene "OTTHUMG00000150799.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14508 chr22 HAVANA transcript 24319095 24319776 . - . gene_id "ENSG00000250470.1"; transcript_id "ENST00000506097.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.3-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150799.1"; havana_transcript "OTTHUMT00000320141.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14509 chr22 HAVANA exon 24319596 24319776 . - . gene_id "ENSG00000250470.1"; transcript_id "ENST00000506097.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.3-001"; exon_number 1; exon_id "ENSE00002037674.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150799.1"; havana_transcript "OTTHUMT00000320141.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14510 chr22 HAVANA exon 24319095 24319260 . - . gene_id "ENSG00000250470.1"; transcript_id "ENST00000506097.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.3-001"; exon_number 2; exon_id "ENSE00002047000.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150799.1"; havana_transcript "OTTHUMT00000320141.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14511 chr22 HAVANA gene 24322339 24326106 . + . gene_id "ENSG00000099984.6"; transcript_id "ENSG00000099984.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2"; level 2; havana_gene "OTTHUMG00000150786.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14512 chr22 HAVANA transcript 24322339 24326106 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14513 chr22 HAVANA exon 24322339 24322500 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; exon_number 1; exon_id "ENSE00001931516.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14514 chr22 HAVANA CDS 24322389 24322500 . + 0 gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; exon_number 1; exon_id "ENSE00001931516.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14515 chr22 HAVANA start_codon 24322389 24322391 . + 0 gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; exon_number 1; exon_id "ENSE00001931516.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14516 chr22 HAVANA exon 24323139 24323226 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; exon_number 2; exon_id "ENSE00001730025.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14517 chr22 HAVANA CDS 24323139 24323226 . + 2 gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; exon_number 2; exon_id "ENSE00001730025.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14518 chr22 HAVANA exon 24324819 24324969 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; exon_number 3; exon_id "ENSE00001709804.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14519 chr22 HAVANA CDS 24324819 24324969 . + 1 gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; exon_number 3; exon_id "ENSE00001709804.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14520 chr22 HAVANA exon 24325062 24325235 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; exon_number 4; exon_id "ENSE00001708234.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14521 chr22 HAVANA CDS 24325062 24325235 . + 0 gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; exon_number 4; exon_id "ENSE00001708234.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14522 chr22 HAVANA exon 24325588 24326106 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; exon_number 5; exon_id "ENSE00001904784.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14523 chr22 HAVANA CDS 24325588 24325794 . + 0 gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; exon_number 5; exon_id "ENSE00001904784.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14524 chr22 HAVANA stop_codon 24325795 24325797 . + 0 gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; exon_number 5; exon_id "ENSE00001904784.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14525 chr22 HAVANA UTR 24322339 24322388 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14526 chr22 HAVANA UTR 24325795 24326106 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000215780.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13821.1"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320080.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14527 chr22 HAVANA transcript 24322387 24325797 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14528 chr22 HAVANA exon 24322387 24322500 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; exon_number 1; exon_id "ENSE00001938639.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14529 chr22 HAVANA CDS 24322389 24322500 . + 0 gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; exon_number 1; exon_id "ENSE00001938639.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14530 chr22 HAVANA start_codon 24322389 24322391 . + 0 gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; exon_number 1; exon_id "ENSE00001938639.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14531 chr22 HAVANA exon 24323139 24323226 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; exon_number 2; exon_id "ENSE00001730025.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14532 chr22 HAVANA CDS 24323139 24323226 . + 2 gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; exon_number 2; exon_id "ENSE00001730025.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14533 chr22 HAVANA exon 24324819 24324969 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; exon_number 3; exon_id "ENSE00001709804.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14534 chr22 HAVANA CDS 24324819 24324969 . + 1 gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; exon_number 3; exon_id "ENSE00001709804.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14535 chr22 HAVANA exon 24325062 24325193 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; exon_number 4; exon_id "ENSE00001742864.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14536 chr22 HAVANA CDS 24325062 24325193 . + 0 gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; exon_number 4; exon_id "ENSE00001742864.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14537 chr22 HAVANA exon 24325588 24325797 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; exon_number 5; exon_id "ENSE00001946516.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14538 chr22 HAVANA CDS 24325588 24325794 . + 0 gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; exon_number 5; exon_id "ENSE00001946516.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14539 chr22 HAVANA stop_codon 24325795 24325797 . + 0 gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; exon_number 5; exon_id "ENSE00001946516.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14540 chr22 HAVANA UTR 24322387 24322388 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14541 chr22 HAVANA UTR 24325795 24325797 . + . gene_id "ENSG00000099984.6"; transcript_id "ENST00000402588.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GSTT2-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150786.1"; havana_transcript "OTTHUMT00000320081.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14542 chr22 HAVANA gene 24329511 24333615 . - . gene_id "ENSG00000224205.1"; transcript_id "ENSG00000224205.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.4"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.4"; level 2; havana_gene "OTTHUMG00000150801.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14543 chr22 HAVANA transcript 24329511 24333615 . - . gene_id "ENSG00000224205.1"; transcript_id "ENST00000437021.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.4-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150801.1"; havana_transcript "OTTHUMT00000320143.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14544 chr22 HAVANA exon 24333534 24333615 . - . gene_id "ENSG00000224205.1"; transcript_id "ENST00000437021.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.4-001"; exon_number 1; exon_id "ENSE00001641243.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150801.1"; havana_transcript "OTTHUMT00000320143.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14545 chr22 HAVANA exon 24331332 24331410 . - . gene_id "ENSG00000224205.1"; transcript_id "ENST00000437021.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.4-001"; exon_number 2; exon_id "ENSE00001740672.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150801.1"; havana_transcript "OTTHUMT00000320143.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14546 chr22 HAVANA exon 24329511 24329664 . - . gene_id "ENSG00000224205.1"; transcript_id "ENST00000437021.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.4-001"; exon_number 3; exon_id "ENSE00001647953.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150801.1"; havana_transcript "OTTHUMT00000320143.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14547 chr22 HAVANA gene 24340828 24347258 . - . gene_id "ENSG00000241850.3"; transcript_id "ENSG00000241850.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP1"; level 2; havana_gene "OTTHUMG00000150802.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14548 chr22 HAVANA transcript 24340828 24347253 . - . gene_id "ENSG00000241850.3"; transcript_id "ENST00000513608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP1-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150802.1"; havana_transcript "OTTHUMT00000320144.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14549 chr22 HAVANA exon 24347142 24347253 . - . gene_id "ENSG00000241850.3"; transcript_id "ENST00000513608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP1-001"; exon_number 1; exon_id "ENSE00002057880.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150802.1"; havana_transcript "OTTHUMT00000320144.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14550 chr22 HAVANA exon 24345657 24345740 . - . gene_id "ENSG00000241850.3"; transcript_id "ENST00000513608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP1-001"; exon_number 2; exon_id "ENSE00002054123.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150802.1"; havana_transcript "OTTHUMT00000320144.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14551 chr22 HAVANA exon 24343411 24343522 . - . gene_id "ENSG00000241850.3"; transcript_id "ENST00000513608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP1-001"; exon_number 3; exon_id "ENSE00002045721.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150802.1"; havana_transcript "OTTHUMT00000320144.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14552 chr22 HAVANA exon 24342274 24342424 . - . gene_id "ENSG00000241850.3"; transcript_id "ENST00000513608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP1-001"; exon_number 4; exon_id "ENSE00002078617.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150802.1"; havana_transcript "OTTHUMT00000320144.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14553 chr22 HAVANA exon 24340828 24340894 . - . gene_id "ENSG00000241850.3"; transcript_id "ENST00000513608.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP1-001"; exon_number 5; exon_id "ENSE00002085674.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150802.1"; havana_transcript "OTTHUMT00000320144.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14554 chr22 ENSEMBL transcript 24340874 24347258 . - . gene_id "ENSG00000241850.3"; transcript_id "ENST00000448934.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP1-201"; level 3; havana_gene "OTTHUMG00000150802.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14555 chr22 ENSEMBL exon 24347142 24347258 . - . gene_id "ENSG00000241850.3"; transcript_id "ENST00000448934.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP1-201"; exon_number 1; exon_id "ENSE00002225603.1"; level 3; havana_gene "OTTHUMG00000150802.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14556 chr22 ENSEMBL exon 24345653 24345740 . - . gene_id "ENSG00000241850.3"; transcript_id "ENST00000448934.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP1-201"; exon_number 2; exon_id "ENSE00001237860.3"; level 3; havana_gene "OTTHUMG00000150802.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14557 chr22 ENSEMBL exon 24343369 24343519 . - . gene_id "ENSG00000241850.3"; transcript_id "ENST00000448934.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP1-201"; exon_number 3; exon_id "ENSE00001788973.1"; level 3; havana_gene "OTTHUMG00000150802.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14558 chr22 ENSEMBL exon 24342269 24342445 . - . gene_id "ENSG00000241850.3"; transcript_id "ENST00000448934.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP1-201"; exon_number 4; exon_id "ENSE00001634410.1"; level 3; havana_gene "OTTHUMG00000150802.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14559 chr22 ENSEMBL exon 24340874 24340933 . - . gene_id "ENSG00000241850.3"; transcript_id "ENST00000448934.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP1-201"; exon_number 5; exon_id "ENSE00001790433.2"; level 3; havana_gene "OTTHUMG00000150802.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14560 chr22 HAVANA gene 24347904 24349416 . + . gene_id "ENSG00000232014.1"; transcript_id "ENSG00000232014.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MTND1P13"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "MTND1P13"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14561 chr22 HAVANA transcript 24347904 24349416 . + . gene_id "ENSG00000232014.1"; transcript_id "ENST00000421902.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MTND1P13"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "MTND1P13-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150813.1"; havana_transcript "OTTHUMT00000320181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14562 chr22 HAVANA exon 24347904 24348402 . + . gene_id "ENSG00000232014.1"; transcript_id "ENST00000421902.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MTND1P13"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "MTND1P13-001"; exon_number 1; exon_id "ENSE00001592687.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150813.1"; havana_transcript "OTTHUMT00000320181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14563 chr22 HAVANA exon 24349329 24349416 . + . gene_id "ENSG00000232014.1"; transcript_id "ENST00000421902.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MTND1P13"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "MTND1P13-001"; exon_number 2; exon_id "ENSE00001635660.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150813.1"; havana_transcript "OTTHUMT00000320181.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14564 chr22 HAVANA gene 24348440 24348799 . + . gene_id "ENSG00000229513.1"; transcript_id "ENSG00000229513.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "EIF4EBP1P2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "EIF4EBP1P2"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150814.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14565 chr22 HAVANA transcript 24348440 24348799 . + . gene_id "ENSG00000229513.1"; transcript_id "ENST00000445894.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "EIF4EBP1P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "EIF4EBP1P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150814.1"; havana_transcript "OTTHUMT00000320182.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14566 chr22 HAVANA exon 24348440 24348799 . + . gene_id "ENSG00000229513.1"; transcript_id "ENST00000445894.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "EIF4EBP1P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "EIF4EBP1P2-001"; exon_number 1; exon_id "ENSE00001681215.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150814.1"; havana_transcript "OTTHUMT00000320182.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14567 chr22 HAVANA gene 24350068 24352081 . - . gene_id "ENSG00000224676.1"; transcript_id "ENSG00000224676.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.8"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.8"; level 2; havana_gene "OTTHUMG00000150817.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14568 chr22 HAVANA transcript 24350068 24352081 . - . gene_id "ENSG00000224676.1"; transcript_id "ENST00000448902.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.8"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.8-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150817.2"; havana_transcript "OTTHUMT00000320194.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14569 chr22 HAVANA exon 24351967 24352081 . - . gene_id "ENSG00000224676.1"; transcript_id "ENST00000448902.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.8"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.8-001"; exon_number 1; exon_id "ENSE00001758290.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150817.2"; havana_transcript "OTTHUMT00000320194.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14570 chr22 HAVANA exon 24351805 24351883 . - . gene_id "ENSG00000224676.1"; transcript_id "ENST00000448902.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.8"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.8-001"; exon_number 2; exon_id "ENSE00001768722.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150817.2"; havana_transcript "OTTHUMT00000320194.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14571 chr22 HAVANA exon 24350788 24350881 . - . gene_id "ENSG00000224676.1"; transcript_id "ENST00000448902.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.8"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.8-001"; exon_number 3; exon_id "ENSE00001722209.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150817.2"; havana_transcript "OTTHUMT00000320194.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14572 chr22 HAVANA exon 24350299 24350374 . - . gene_id "ENSG00000224676.1"; transcript_id "ENST00000448902.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.8"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.8-001"; exon_number 4; exon_id "ENSE00001717734.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150817.2"; havana_transcript "OTTHUMT00000320194.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14573 chr22 HAVANA exon 24350068 24350194 . - . gene_id "ENSG00000224676.1"; transcript_id "ENST00000448902.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.8"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.8-001"; exon_number 5; exon_id "ENSE00001798522.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150817.2"; havana_transcript "OTTHUMT00000320194.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14574 chr22 HAVANA transcript 24350175 24351822 . - . gene_id "ENSG00000224676.1"; transcript_id "ENST00000421045.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000351.8-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150817.2"; havana_transcript "OTTHUMT00000329159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14575 chr22 HAVANA exon 24351795 24351822 . - . gene_id "ENSG00000224676.1"; transcript_id "ENST00000421045.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000351.8-002"; exon_number 1; exon_id "ENSE00001610341.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150817.2"; havana_transcript "OTTHUMT00000329159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14576 chr22 HAVANA exon 24350738 24350888 . - . gene_id "ENSG00000224676.1"; transcript_id "ENST00000421045.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000351.8-002"; exon_number 2; exon_id "ENSE00001751105.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150817.2"; havana_transcript "OTTHUMT00000329159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14577 chr22 HAVANA exon 24350175 24350424 . - . gene_id "ENSG00000224676.1"; transcript_id "ENST00000421045.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000351.8-002"; exon_number 3; exon_id "ENSE00001716423.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150817.2"; havana_transcript "OTTHUMT00000329159.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14578 chr22 HAVANA gene 24366750 24370882 . + . gene_id "ENSG00000184490.6"; transcript_id "ENSG00000184490.6"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.9"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.9"; level 2; havana_gene "OTTHUMG00000150815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14579 chr22 HAVANA transcript 24366750 24370830 . + . gene_id "ENSG00000184490.6"; transcript_id "ENST00000511878.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.9-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150815.1"; havana_transcript "OTTHUMT00000320183.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14580 chr22 HAVANA exon 24366750 24366855 . + . gene_id "ENSG00000184490.6"; transcript_id "ENST00000511878.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.9-001"; exon_number 1; exon_id "ENSE00002040403.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150815.1"; havana_transcript "OTTHUMT00000320183.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14581 chr22 HAVANA exon 24368970 24369054 . + . gene_id "ENSG00000184490.6"; transcript_id "ENST00000511878.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.9-001"; exon_number 2; exon_id "ENSE00002061759.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150815.1"; havana_transcript "OTTHUMT00000320183.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14582 chr22 HAVANA exon 24370728 24370830 . + . gene_id "ENSG00000184490.6"; transcript_id "ENST00000511878.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.9-001"; exon_number 3; exon_id "ENSE00002019915.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150815.1"; havana_transcript "OTTHUMT00000320183.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14583 chr22 ENSEMBL transcript 24366752 24370882 . + . gene_id "ENSG00000184490.6"; transcript_id "ENST00000329210.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.9-201"; level 3; havana_gene "OTTHUMG00000150815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14584 chr22 ENSEMBL exon 24366752 24366860 . + . gene_id "ENSG00000184490.6"; transcript_id "ENST00000329210.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.9-201"; exon_number 1; exon_id "ENSE00001297362.3"; level 3; havana_gene "OTTHUMG00000150815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14585 chr22 ENSEMBL exon 24368971 24369023 . + . gene_id "ENSG00000184490.6"; transcript_id "ENST00000329210.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.9-201"; exon_number 2; exon_id "ENSE00001303098.3"; level 3; havana_gene "OTTHUMG00000150815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14586 chr22 ENSEMBL exon 24369028 24369059 . + . gene_id "ENSG00000184490.6"; transcript_id "ENST00000329210.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.9-201"; exon_number 3; exon_id "ENSE00001329869.1"; level 3; havana_gene "OTTHUMG00000150815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14587 chr22 ENSEMBL exon 24370732 24370882 . + . gene_id "ENSG00000184490.6"; transcript_id "ENST00000329210.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.9"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.9-201"; exon_number 4; exon_id "ENSE00001294179.1"; level 3; havana_gene "OTTHUMG00000150815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14588 chr22 HAVANA gene 24373117 24374043 . + . gene_id "ENSG00000235231.3"; transcript_id "ENSG00000235231.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.10"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.10"; level 2; havana_gene "OTTHUMG00000150818.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14589 chr22 ENSEMBL transcript 24373117 24374043 . + . gene_id "ENSG00000235231.3"; transcript_id "ENST00000439866.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.10-201"; level 3; havana_gene "OTTHUMG00000150818.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14590 chr22 ENSEMBL exon 24373117 24373245 . + . gene_id "ENSG00000235231.3"; transcript_id "ENST00000439866.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.10-201"; exon_number 1; exon_id "ENSE00001786719.1"; level 3; havana_gene "OTTHUMG00000150818.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14591 chr22 ENSEMBL exon 24373610 24374043 . + . gene_id "ENSG00000235231.3"; transcript_id "ENST00000439866.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.10-201"; exon_number 2; exon_id "ENSE00001646464.1"; level 3; havana_gene "OTTHUMG00000150818.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14592 chr22 HAVANA transcript 24373138 24373785 . + . gene_id "ENSG00000235231.3"; transcript_id "ENST00000503903.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.10-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150818.1"; havana_transcript "OTTHUMT00000320195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14593 chr22 HAVANA exon 24373138 24373244 . + . gene_id "ENSG00000235231.3"; transcript_id "ENST00000503903.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.10-001"; exon_number 1; exon_id "ENSE00002058495.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150818.1"; havana_transcript "OTTHUMT00000320195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14594 chr22 HAVANA exon 24373612 24373785 . + . gene_id "ENSG00000235231.3"; transcript_id "ENST00000503903.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.10"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.10-001"; exon_number 2; exon_id "ENSE00002068632.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150818.1"; havana_transcript "OTTHUMT00000320195.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14595 chr22 HAVANA gene 24375562 24376211 . + . gene_id "ENSG00000272955.1"; transcript_id "ENSG00000272955.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "KB-226F1.1"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "KB-226F1.1"; level 2; havana_gene "OTTHUMG00000186176.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14596 chr22 HAVANA transcript 24375562 24376211 . + . gene_id "ENSG00000272955.1"; transcript_id "ENST00000608619.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "KB-226F1.1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "KB-226F1.1-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000186176.1"; havana_transcript "OTTHUMT00000472363.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14597 chr22 HAVANA exon 24375562 24376211 . + . gene_id "ENSG00000272955.1"; transcript_id "ENST00000608619.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "KB-226F1.1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "KB-226F1.1-001"; exon_number 1; exon_id "ENSE00003704495.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000186176.1"; havana_transcript "OTTHUMT00000472363.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14598 chr22 HAVANA gene 24376133 24384680 . - . gene_id "ENSG00000184674.8"; transcript_id "ENSG00000184674.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1"; level 1; havana_gene "OTTHUMG00000150816.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14599 chr22 HAVANA transcript 24376133 24379492 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000436103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GSTT1-010"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320193.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14600 chr22 HAVANA exon 24379361 24379492 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000436103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GSTT1-010"; exon_number 1; exon_id "ENSE00001605635.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320193.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14601 chr22 HAVANA CDS 24379361 24379492 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000436103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GSTT1-010"; exon_number 1; exon_id "ENSE00001605635.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320193.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14602 chr22 HAVANA exon 24376133 24376617 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000436103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GSTT1-010"; exon_number 2; exon_id "ENSE00003523878.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320193.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14603 chr22 HAVANA CDS 24376426 24376617 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000436103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GSTT1-010"; exon_number 2; exon_id "ENSE00003523878.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320193.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14604 chr22 HAVANA stop_codon 24376423 24376425 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000436103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GSTT1-010"; exon_number 2; exon_id "ENSE00003523878.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320193.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14605 chr22 HAVANA UTR 24376133 24376425 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000436103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GSTT1-010"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320193.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14606 chr22 HAVANA transcript 24376133 24384258 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-011"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000322309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14607 chr22 HAVANA exon 24384120 24384258 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-011"; exon_number 1; exon_id "ENSE00001702553.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000322309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14608 chr22 HAVANA CDS 24384120 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000417831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-011"; exon_number 1; exon_id "ENSE00001702553.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000322309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14609 chr22 HAVANA start_codon 24384229 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000417831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-011"; exon_number 1; exon_id "ENSE00001702553.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000322309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14610 chr22 HAVANA exon 24376822 24376998 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-011"; exon_number 2; exon_id "ENSE00003479561.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000322309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14611 chr22 HAVANA CDS 24376976 24376998 . - 2 gene_id "ENSG00000184674.8"; transcript_id "ENST00000417831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-011"; exon_number 2; exon_id "ENSE00003479561.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000322309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14612 chr22 HAVANA stop_codon 24376973 24376975 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000417831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-011"; exon_number 2; exon_id "ENSE00003479561.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000322309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14613 chr22 HAVANA exon 24376133 24376617 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-011"; exon_number 3; exon_id "ENSE00003641330.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000322309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14614 chr22 HAVANA UTR 24384232 24384258 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-011"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000322309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14615 chr22 HAVANA UTR 24376822 24376975 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-011"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000322309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14616 chr22 HAVANA UTR 24376133 24376617 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417831.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-011"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000322309.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14617 chr22 HAVANA transcript 24376133 24384284 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14618 chr22 HAVANA exon 24384120 24384284 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; exon_number 1; exon_id "ENSE00001597124.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14619 chr22 HAVANA CDS 24384120 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; exon_number 1; exon_id "ENSE00001597124.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14620 chr22 HAVANA start_codon 24384229 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; exon_number 1; exon_id "ENSE00001597124.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14621 chr22 HAVANA exon 24381700 24381787 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; exon_number 2; exon_id "ENSE00003596727.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14622 chr22 HAVANA CDS 24381700 24381787 . - 2 gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; exon_number 2; exon_id "ENSE00003596727.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14623 chr22 HAVANA exon 24379361 24379511 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; exon_number 3; exon_id "ENSE00003509719.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14624 chr22 HAVANA CDS 24379361 24379511 . - 1 gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; exon_number 3; exon_id "ENSE00003509719.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14625 chr22 HAVANA exon 24376822 24376998 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; exon_number 4; exon_id "ENSE00003562317.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14626 chr22 HAVANA CDS 24376822 24376998 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; exon_number 4; exon_id "ENSE00003562317.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14627 chr22 HAVANA exon 24376133 24376617 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; exon_number 5; exon_id "ENSE00003523878.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14628 chr22 HAVANA CDS 24376426 24376617 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; exon_number 5; exon_id "ENSE00003523878.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14629 chr22 HAVANA stop_codon 24376423 24376425 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; exon_number 5; exon_id "ENSE00003523878.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14630 chr22 HAVANA UTR 24384232 24384284 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14631 chr22 HAVANA UTR 24376133 24376425 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000248935.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13822.1"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320184.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14632 chr22 HAVANA transcript 24376139 24384252 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000426209.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-007"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14633 chr22 HAVANA exon 24384120 24384252 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000426209.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-007"; exon_number 1; exon_id "ENSE00001702255.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14634 chr22 HAVANA CDS 24384120 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000426209.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-007"; exon_number 1; exon_id "ENSE00001702255.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14635 chr22 HAVANA start_codon 24384229 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000426209.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-007"; exon_number 1; exon_id "ENSE00001702255.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14636 chr22 HAVANA exon 24379361 24379450 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000426209.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-007"; exon_number 2; exon_id "ENSE00003634117.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14637 chr22 HAVANA CDS 24379425 24379450 . - 2 gene_id "ENSG00000184674.8"; transcript_id "ENST00000426209.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-007"; exon_number 2; exon_id "ENSE00003634117.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14638 chr22 HAVANA stop_codon 24379422 24379424 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000426209.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-007"; exon_number 2; exon_id "ENSE00003634117.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14639 chr22 HAVANA exon 24376822 24376998 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000426209.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-007"; exon_number 3; exon_id "ENSE00003614961.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14640 chr22 HAVANA exon 24376139 24376617 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000426209.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-007"; exon_number 4; exon_id "ENSE00001772172.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14641 chr22 HAVANA UTR 24384232 24384252 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000426209.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-007"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14642 chr22 HAVANA UTR 24379361 24379424 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000426209.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-007"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14643 chr22 HAVANA UTR 24376822 24376998 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000426209.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-007"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14644 chr22 HAVANA UTR 24376139 24376617 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000426209.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-007"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320190.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14645 chr22 HAVANA transcript 24376139 24384259 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14646 chr22 HAVANA exon 24384120 24384259 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; exon_number 1; exon_id "ENSE00001681523.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14647 chr22 HAVANA CDS 24384120 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; exon_number 1; exon_id "ENSE00001681523.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14648 chr22 HAVANA start_codon 24384229 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; exon_number 1; exon_id "ENSE00001681523.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14649 chr22 HAVANA exon 24381700 24381787 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; exon_number 2; exon_id "ENSE00003596727.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14650 chr22 HAVANA CDS 24381700 24381787 . - 2 gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; exon_number 2; exon_id "ENSE00003596727.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14651 chr22 HAVANA exon 24379361 24379450 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; exon_number 3; exon_id "ENSE00003508588.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14652 chr22 HAVANA CDS 24379361 24379450 . - 1 gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; exon_number 3; exon_id "ENSE00003508588.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14653 chr22 HAVANA exon 24376822 24376998 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; exon_number 4; exon_id "ENSE00003534827.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14654 chr22 HAVANA CDS 24376998 24376998 . - 1 gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; exon_number 4; exon_id "ENSE00003534827.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14655 chr22 HAVANA stop_codon 24376995 24376997 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; exon_number 4; exon_id "ENSE00003534827.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14656 chr22 HAVANA exon 24376139 24376617 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; exon_number 5; exon_id "ENSE00001772172.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14657 chr22 HAVANA UTR 24384232 24384259 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14658 chr22 HAVANA UTR 24376822 24376997 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14659 chr22 HAVANA UTR 24376139 24376617 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000458231.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-004"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320187.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14660 chr22 HAVANA transcript 24376139 24384267 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-003"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14661 chr22 HAVANA exon 24384120 24384267 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-003"; exon_number 1; exon_id "ENSE00001715114.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14662 chr22 HAVANA CDS 24384120 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000417489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-003"; exon_number 1; exon_id "ENSE00001715114.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14663 chr22 HAVANA start_codon 24384229 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000417489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-003"; exon_number 1; exon_id "ENSE00001715114.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14664 chr22 HAVANA exon 24379361 24379511 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-003"; exon_number 2; exon_id "ENSE00003633381.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14665 chr22 HAVANA CDS 24379492 24379511 . - 2 gene_id "ENSG00000184674.8"; transcript_id "ENST00000417489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-003"; exon_number 2; exon_id "ENSE00003633381.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14666 chr22 HAVANA stop_codon 24379489 24379491 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000417489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-003"; exon_number 2; exon_id "ENSE00003633381.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14667 chr22 HAVANA exon 24376822 24376998 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-003"; exon_number 3; exon_id "ENSE00003614961.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14668 chr22 HAVANA exon 24376139 24376617 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-003"; exon_number 4; exon_id "ENSE00001772172.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14669 chr22 HAVANA UTR 24384232 24384267 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-003"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14670 chr22 HAVANA UTR 24379361 24379491 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-003"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14671 chr22 HAVANA UTR 24376822 24376998 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-003"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14672 chr22 HAVANA UTR 24376139 24376617 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-003"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320186.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14673 chr22 ENSEMBL transcript 24376291 24384242 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000439996.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150816.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14674 chr22 ENSEMBL exon 24384120 24384242 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000439996.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-201"; exon_number 1; exon_id "ENSE00002218103.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150816.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14675 chr22 ENSEMBL exon 24379361 24379511 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000439996.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-201"; exon_number 2; exon_id "ENSE00003579115.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150816.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14676 chr22 ENSEMBL exon 24376822 24376998 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000439996.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-201"; exon_number 3; exon_id "ENSE00003530446.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150816.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14677 chr22 ENSEMBL CDS 24376822 24376995 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000439996.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-201"; exon_number 3; exon_id "ENSE00003530446.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150816.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14678 chr22 ENSEMBL start_codon 24376993 24376995 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000439996.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-201"; exon_number 3; exon_id "ENSE00003530446.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150816.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14679 chr22 ENSEMBL exon 24376291 24376617 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000439996.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-201"; exon_number 4; exon_id "ENSE00001673201.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150816.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14680 chr22 ENSEMBL CDS 24376426 24376617 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000439996.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-201"; exon_number 4; exon_id "ENSE00001673201.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150816.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14681 chr22 ENSEMBL stop_codon 24376423 24376425 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000439996.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-201"; exon_number 4; exon_id "ENSE00001673201.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150816.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14682 chr22 ENSEMBL UTR 24384120 24384242 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000439996.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150816.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14683 chr22 ENSEMBL UTR 24379361 24379511 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000439996.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150816.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14684 chr22 ENSEMBL UTR 24376996 24376998 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000439996.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150816.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14685 chr22 ENSEMBL UTR 24376291 24376425 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000439996.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150816.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14686 chr22 HAVANA transcript 24376533 24384252 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417870.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GSTT1-012"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000341025.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14687 chr22 HAVANA exon 24384120 24384252 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417870.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GSTT1-012"; exon_number 1; exon_id "ENSE00001702255.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000341025.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14688 chr22 HAVANA CDS 24384120 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000417870.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GSTT1-012"; exon_number 1; exon_id "ENSE00001702255.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000341025.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14689 chr22 HAVANA start_codon 24384229 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000417870.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GSTT1-012"; exon_number 1; exon_id "ENSE00001702255.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000341025.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14690 chr22 HAVANA exon 24376533 24376617 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417870.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GSTT1-012"; exon_number 2; exon_id "ENSE00001719619.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000341025.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14691 chr22 HAVANA CDS 24376533 24376617 . - 2 gene_id "ENSG00000184674.8"; transcript_id "ENST00000417870.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GSTT1-012"; exon_number 2; exon_id "ENSE00001719619.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000341025.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14692 chr22 HAVANA UTR 24384232 24384252 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000417870.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GSTT1-012"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000341025.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14693 chr22 HAVANA transcript 24376915 24384271 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14694 chr22 HAVANA exon 24384120 24384271 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; exon_number 1; exon_id "ENSE00003585129.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14695 chr22 HAVANA CDS 24384120 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; exon_number 1; exon_id "ENSE00003585129.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14696 chr22 HAVANA start_codon 24384229 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; exon_number 1; exon_id "ENSE00003585129.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14697 chr22 HAVANA exon 24382973 24383081 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; exon_number 2; exon_id "ENSE00001741331.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14698 chr22 HAVANA CDS 24382973 24383081 . - 2 gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; exon_number 2; exon_id "ENSE00001741331.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14699 chr22 HAVANA exon 24381700 24381787 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; exon_number 3; exon_id "ENSE00003615851.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14700 chr22 HAVANA CDS 24381700 24381787 . - 1 gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; exon_number 3; exon_id "ENSE00003615851.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14701 chr22 HAVANA exon 24379361 24379511 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; exon_number 4; exon_id "ENSE00003658021.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14702 chr22 HAVANA CDS 24379479 24379511 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; exon_number 4; exon_id "ENSE00003658021.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14703 chr22 HAVANA stop_codon 24379476 24379478 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; exon_number 4; exon_id "ENSE00003658021.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14704 chr22 HAVANA exon 24376915 24376998 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; exon_number 5; exon_id "ENSE00001746484.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14705 chr22 HAVANA UTR 24384232 24384271 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14706 chr22 HAVANA UTR 24379361 24379478 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14707 chr22 HAVANA UTR 24376915 24376998 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000418883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GSTT1-009"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320192.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14708 chr22 HAVANA transcript 24379874 24384271 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000480898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GSTT1-002"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320185.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14709 chr22 HAVANA exon 24384120 24384271 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000480898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GSTT1-002"; exon_number 1; exon_id "ENSE00003550720.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320185.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14710 chr22 HAVANA exon 24379874 24381787 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000480898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GSTT1-002"; exon_number 2; exon_id "ENSE00001867610.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320185.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14711 chr22 HAVANA transcript 24381521 24384271 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000428175.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GSTT1-006"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320189.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14712 chr22 HAVANA exon 24384120 24384271 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000428175.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GSTT1-006"; exon_number 1; exon_id "ENSE00003550720.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320189.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14713 chr22 HAVANA exon 24381521 24381934 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000428175.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GSTT1-006"; exon_number 2; exon_id "ENSE00001730960.2"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320189.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14714 chr22 HAVANA transcript 24381705 24384680 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000447865.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-008"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320191.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14715 chr22 HAVANA exon 24384334 24384680 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000447865.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-008"; exon_number 1; exon_id "ENSE00001728955.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320191.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14716 chr22 HAVANA exon 24384120 24384248 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000447865.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-008"; exon_number 2; exon_id "ENSE00001591955.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320191.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14717 chr22 HAVANA CDS 24384120 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000447865.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-008"; exon_number 2; exon_id "ENSE00001591955.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320191.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14718 chr22 HAVANA start_codon 24384229 24384231 . - 0 gene_id "ENSG00000184674.8"; transcript_id "ENST00000447865.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-008"; exon_number 2; exon_id "ENSE00001591955.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320191.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14719 chr22 HAVANA exon 24381705 24381787 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000447865.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-008"; exon_number 3; exon_id "ENSE00001750669.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320191.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14720 chr22 HAVANA CDS 24381705 24381787 . - 2 gene_id "ENSG00000184674.8"; transcript_id "ENST00000447865.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-008"; exon_number 3; exon_id "ENSE00001750669.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320191.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14721 chr22 HAVANA UTR 24384334 24384680 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000447865.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-008"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320191.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14722 chr22 HAVANA UTR 24384232 24384248 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000447865.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GSTT1-008"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320191.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14723 chr22 HAVANA transcript 24382933 24384271 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000486544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GSTT1-005"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14724 chr22 HAVANA exon 24384120 24384271 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000486544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GSTT1-005"; exon_number 1; exon_id "ENSE00003550720.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14725 chr22 HAVANA exon 24382933 24383366 . - . gene_id "ENSG00000184674.8"; transcript_id "ENST00000486544.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GSTT1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GSTT1-005"; exon_number 2; exon_id "ENSE00001821000.1"; level 2; havana_gene "OTTHUMG00000150816.3"; havana_transcript "OTTHUMT00000320188.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14726 chr22 HAVANA gene 24385938 24401899 . - . gene_id "ENSG00000239334.1"; transcript_id "ENSG00000239334.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP2"; level 2; havana_gene "OTTHUMG00000150811.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14727 chr22 HAVANA transcript 24385938 24401899 . - . gene_id "ENSG00000239334.1"; transcript_id "ENST00000485225.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP2-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150811.3"; havana_transcript "OTTHUMT00000320179.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14728 chr22 HAVANA exon 24400627 24401899 . - . gene_id "ENSG00000239334.1"; transcript_id "ENST00000485225.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP2-001"; exon_number 1; exon_id "ENSE00001853563.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150811.3"; havana_transcript "OTTHUMT00000320179.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14729 chr22 HAVANA exon 24400206 24400293 . - . gene_id "ENSG00000239334.1"; transcript_id "ENST00000485225.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP2-001"; exon_number 2; exon_id "ENSE00001765788.2"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150811.3"; havana_transcript "OTTHUMT00000320179.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14730 chr22 HAVANA exon 24396199 24396375 . - . gene_id "ENSG00000239334.1"; transcript_id "ENST00000485225.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP2-001"; exon_number 3; exon_id "ENSE00001721149.2"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150811.3"; havana_transcript "OTTHUMT00000320179.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14731 chr22 HAVANA exon 24394678 24394849 . - . gene_id "ENSG00000239334.1"; transcript_id "ENST00000485225.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP2-001"; exon_number 4; exon_id "ENSE00001716680.2"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150811.3"; havana_transcript "OTTHUMT00000320179.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14732 chr22 HAVANA exon 24385938 24386297 . - . gene_id "ENSG00000239334.1"; transcript_id "ENST00000485225.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GSTTP2-001"; exon_number 5; exon_id "ENSE00001909056.1"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000150811.3"; havana_transcript "OTTHUMT00000320179.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14733 chr22 HAVANA transcript 24396360 24401855 . - . gene_id "ENSG00000239334.1"; transcript_id "ENST00000466426.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GSTTP2-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150811.3"; havana_transcript "OTTHUMT00000322304.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14734 chr22 HAVANA exon 24401691 24401855 . - . gene_id "ENSG00000239334.1"; transcript_id "ENST00000466426.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GSTTP2-002"; exon_number 1; exon_id "ENSE00001846986.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150811.3"; havana_transcript "OTTHUMT00000322304.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14735 chr22 HAVANA exon 24400206 24400293 . - . gene_id "ENSG00000239334.1"; transcript_id "ENST00000466426.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GSTTP2-002"; exon_number 2; exon_id "ENSE00001765788.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150811.3"; havana_transcript "OTTHUMT00000322304.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14736 chr22 HAVANA exon 24396360 24396582 . - . gene_id "ENSG00000239334.1"; transcript_id "ENST00000466426.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GSTTP2-002"; exon_number 3; exon_id "ENSE00001929757.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150811.3"; havana_transcript "OTTHUMT00000322304.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14737 chr22 HAVANA transcript 24397664 24401779 . - . gene_id "ENSG00000239334.1"; transcript_id "ENST00000389399.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GSTTP2-003"; level 2; havana_gene "OTTHUMG00000150811.3"; havana_transcript "OTTHUMT00000329158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14738 chr22 HAVANA exon 24401691 24401779 . - . gene_id "ENSG00000239334.1"; transcript_id "ENST00000389399.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GSTTP2-003"; exon_number 1; exon_id "ENSE00001505779.4"; level 2; havana_gene "OTTHUMG00000150811.3"; havana_transcript "OTTHUMT00000329158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14739 chr22 HAVANA exon 24400206 24400293 . - . gene_id "ENSG00000239334.1"; transcript_id "ENST00000389399.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GSTTP2-003"; exon_number 2; exon_id "ENSE00001765788.2"; level 2; havana_gene "OTTHUMG00000150811.3"; havana_transcript "OTTHUMT00000329158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14740 chr22 HAVANA exon 24397664 24397770 . - . gene_id "ENSG00000239334.1"; transcript_id "ENST00000389399.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GSTTP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GSTTP2-003"; exon_number 3; exon_id "ENSE00001666497.2"; level 2; havana_gene "OTTHUMG00000150811.3"; havana_transcript "OTTHUMT00000329158.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14741 chr22 HAVANA gene 24402751 24404704 . - . gene_id "ENSG00000235689.1"; transcript_id "ENSG00000235689.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.13"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.13"; level 2; havana_gene "OTTHUMG00000150812.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14742 chr22 HAVANA transcript 24402751 24404704 . - . gene_id "ENSG00000235689.1"; transcript_id "ENST00000440539.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.13"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.13-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150812.1"; havana_transcript "OTTHUMT00000320180.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14743 chr22 HAVANA exon 24404674 24404704 . - . gene_id "ENSG00000235689.1"; transcript_id "ENST00000440539.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.13"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.13-001"; exon_number 1; exon_id "ENSE00001631585.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150812.1"; havana_transcript "OTTHUMT00000320180.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14744 chr22 HAVANA exon 24403450 24403600 . - . gene_id "ENSG00000235689.1"; transcript_id "ENST00000440539.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.13"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.13-001"; exon_number 2; exon_id "ENSE00001606586.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150812.1"; havana_transcript "OTTHUMT00000320180.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14745 chr22 HAVANA exon 24402751 24402835 . - . gene_id "ENSG00000235689.1"; transcript_id "ENST00000440539.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000351.13"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000351.13-001"; exon_number 3; exon_id "ENSE00001635396.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150812.1"; havana_transcript "OTTHUMT00000320180.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14746 chr22 HAVANA gene 24407642 24574596 . + . gene_id "ENSG00000099991.12"; transcript_id "ENSG00000099991.12"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1"; level 1; havana_gene "OTTHUMG00000150797.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14747 chr22 HAVANA transcript 24407642 24452767 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14748 chr22 HAVANA exon 24407642 24407817 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 1; exon_id "ENSE00001623360.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14749 chr22 HAVANA exon 24431892 24431968 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 2; exon_id "ENSE00001361081.2"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14750 chr22 HAVANA CDS 24431966 24431968 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 2; exon_id "ENSE00001361081.2"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14751 chr22 HAVANA start_codon 24431966 24431968 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 2; exon_id "ENSE00001361081.2"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14752 chr22 HAVANA exon 24432537 24432629 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 3; exon_id "ENSE00001257233.3"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14753 chr22 HAVANA CDS 24432537 24432629 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 3; exon_id "ENSE00001257233.3"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14754 chr22 HAVANA exon 24434796 24434909 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 4; exon_id "ENSE00000651602.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14755 chr22 HAVANA CDS 24434796 24434909 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 4; exon_id "ENSE00000651602.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14756 chr22 HAVANA exon 24439366 24439546 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 5; exon_id "ENSE00000651604.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14757 chr22 HAVANA CDS 24439366 24439546 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 5; exon_id "ENSE00000651604.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14758 chr22 HAVANA exon 24445553 24445682 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 6; exon_id "ENSE00000651605.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14759 chr22 HAVANA CDS 24445553 24445682 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 6; exon_id "ENSE00000651605.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14760 chr22 HAVANA exon 24447287 24447436 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 7; exon_id "ENSE00000651606.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14761 chr22 HAVANA CDS 24447287 24447436 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 7; exon_id "ENSE00000651606.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14762 chr22 HAVANA exon 24451336 24451622 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 8; exon_id "ENSE00000651607.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14763 chr22 HAVANA CDS 24451336 24451622 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 8; exon_id "ENSE00000651607.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14764 chr22 HAVANA exon 24452655 24452767 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 9; exon_id "ENSE00001750762.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14765 chr22 HAVANA CDS 24452655 24452767 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; exon_number 9; exon_id "ENSE00001750762.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14766 chr22 HAVANA UTR 24407642 24407817 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14767 chr22 HAVANA UTR 24431892 24431965 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000454754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-013"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320278.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14768 chr22 HAVANA transcript 24407765 24574596 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14769 chr22 HAVANA exon 24407765 24407817 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 1; exon_id "ENSE00001361087.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14770 chr22 HAVANA exon 24431892 24431968 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 2; exon_id "ENSE00001361081.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14771 chr22 HAVANA CDS 24431966 24431968 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 2; exon_id "ENSE00001361081.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14772 chr22 HAVANA start_codon 24431966 24431968 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 2; exon_id "ENSE00001361081.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14773 chr22 HAVANA exon 24432537 24432629 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 3; exon_id "ENSE00001257233.3"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14774 chr22 HAVANA CDS 24432537 24432629 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 3; exon_id "ENSE00001257233.3"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14775 chr22 HAVANA exon 24434796 24434909 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 4; exon_id "ENSE00000651602.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14776 chr22 HAVANA CDS 24434796 24434909 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 4; exon_id "ENSE00000651602.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14777 chr22 HAVANA exon 24437587 24437721 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 5; exon_id "ENSE00000651603.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14778 chr22 HAVANA CDS 24437587 24437721 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 5; exon_id "ENSE00000651603.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14779 chr22 HAVANA exon 24439366 24439546 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 6; exon_id "ENSE00000651604.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14780 chr22 HAVANA CDS 24439366 24439546 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 6; exon_id "ENSE00000651604.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14781 chr22 HAVANA exon 24445553 24445682 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 7; exon_id "ENSE00000651605.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14782 chr22 HAVANA CDS 24445553 24445682 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 7; exon_id "ENSE00000651605.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14783 chr22 HAVANA exon 24447287 24447436 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 8; exon_id "ENSE00000651606.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14784 chr22 HAVANA CDS 24447287 24447436 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 8; exon_id "ENSE00000651606.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14785 chr22 HAVANA exon 24451336 24451622 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 9; exon_id "ENSE00000651607.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14786 chr22 HAVANA CDS 24451336 24451622 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 9; exon_id "ENSE00000651607.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14787 chr22 HAVANA exon 24452655 24452823 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 10; exon_id "ENSE00000651608.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14788 chr22 HAVANA CDS 24452655 24452823 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 10; exon_id "ENSE00000651608.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14789 chr22 HAVANA exon 24455690 24455826 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 11; exon_id "ENSE00000651609.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14790 chr22 HAVANA CDS 24455690 24455826 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 11; exon_id "ENSE00000651609.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14791 chr22 HAVANA exon 24456387 24456604 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 12; exon_id "ENSE00000651610.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14792 chr22 HAVANA CDS 24456387 24456604 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 12; exon_id "ENSE00000651610.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14793 chr22 HAVANA exon 24458410 24458488 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 13; exon_id "ENSE00000651611.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14794 chr22 HAVANA CDS 24458410 24458488 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 13; exon_id "ENSE00000651611.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14795 chr22 HAVANA exon 24459422 24459609 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 14; exon_id "ENSE00000651612.3"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14796 chr22 HAVANA CDS 24459422 24459609 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 14; exon_id "ENSE00000651612.3"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14797 chr22 HAVANA exon 24460498 24460650 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 15; exon_id "ENSE00000651613.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14798 chr22 HAVANA CDS 24460498 24460650 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 15; exon_id "ENSE00000651613.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
14799 chr22 HAVANA exon 24462938 24463132 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 16; exon_id "ENSE00001256688.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14800 chr22 HAVANA CDS 24462938 24463132 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 16; exon_id "ENSE00001256688.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
14801 chr22 HAVANA exon 24466751 24466993 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 17; exon_id "ENSE00000651615.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14802 chr22 HAVANA CDS 24466751 24466993 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 17; exon_id "ENSE00000651615.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14803 chr22 HAVANA exon 24468304 24468460 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 18; exon_id "ENSE00000651616.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
14804 chr22 HAVANA CDS 24468304 24468460 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 18; exon_id "ENSE00000651616.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14805 chr22 HAVANA exon 24472118 24472233 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 19; exon_id "ENSE00000651617.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14806 chr22 HAVANA CDS 24472118 24472233 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 19; exon_id "ENSE00000651617.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14807 chr22 HAVANA exon 24479181 24479342 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 20; exon_id "ENSE00000651618.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14808 chr22 HAVANA CDS 24479181 24479342 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 20; exon_id "ENSE00000651618.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14809 chr22 HAVANA exon 24480532 24480738 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 21; exon_id "ENSE00000651619.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14810 chr22 HAVANA CDS 24480532 24480738 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 21; exon_id "ENSE00000651619.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14811 chr22 HAVANA exon 24480959 24481104 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 22; exon_id "ENSE00000651620.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14812 chr22 HAVANA CDS 24480959 24481104 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 22; exon_id "ENSE00000651620.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14813 chr22 HAVANA exon 24483405 24483666 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 23; exon_id "ENSE00000651622.3"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14814 chr22 HAVANA CDS 24483405 24483666 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 23; exon_id "ENSE00000651622.3"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14815 chr22 HAVANA exon 24487537 24487797 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 24; exon_id "ENSE00000651625.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14816 chr22 HAVANA CDS 24487537 24487797 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 24; exon_id "ENSE00000651625.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14817 chr22 HAVANA exon 24491894 24492045 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 25; exon_id "ENSE00000651626.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14818 chr22 HAVANA CDS 24491894 24492045 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 25; exon_id "ENSE00000651626.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14819 chr22 HAVANA exon 24493977 24494155 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 26; exon_id "ENSE00000651628.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14820 chr22 HAVANA CDS 24493977 24494155 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 26; exon_id "ENSE00000651628.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14821 chr22 HAVANA exon 24509533 24509715 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 27; exon_id "ENSE00003539870.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14822 chr22 HAVANA CDS 24509533 24509715 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 27; exon_id "ENSE00003539870.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14823 chr22 HAVANA exon 24515334 24515665 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 28; exon_id "ENSE00000651631.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14824 chr22 HAVANA CDS 24515334 24515665 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 28; exon_id "ENSE00000651631.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14825 chr22 HAVANA exon 24530269 24530382 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 29; exon_id "ENSE00000651632.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14826 chr22 HAVANA CDS 24530269 24530382 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 29; exon_id "ENSE00000651632.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
14827 chr22 HAVANA exon 24560368 24560531 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 30; exon_id "ENSE00000651635.3"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14828 chr22 HAVANA CDS 24560368 24560531 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 30; exon_id "ENSE00000651635.3"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14829 chr22 HAVANA exon 24561498 24561594 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 31; exon_id "ENSE00000879517.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14830 chr22 HAVANA CDS 24561498 24561594 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 31; exon_id "ENSE00000879517.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14831 chr22 HAVANA exon 24562607 24563281 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 32; exon_id "ENSE00000879518.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14832 chr22 HAVANA CDS 24562607 24563281 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 32; exon_id "ENSE00000879518.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14833 chr22 HAVANA exon 24564415 24564489 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 33; exon_id "ENSE00003521419.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14834 chr22 HAVANA CDS 24564415 24564489 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 33; exon_id "ENSE00003521419.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
14835 chr22 HAVANA exon 24567681 24567963 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 34; exon_id "ENSE00003567260.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14836 chr22 HAVANA CDS 24567681 24567963 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 34; exon_id "ENSE00003567260.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14837 chr22 HAVANA exon 24572079 24572243 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 35; exon_id "ENSE00000651649.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14838 chr22 HAVANA CDS 24572079 24572243 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 35; exon_id "ENSE00000651649.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14839 chr22 HAVANA exon 24573472 24573785 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 36; exon_id "ENSE00001256752.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14840 chr22 HAVANA CDS 24573472 24573785 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 36; exon_id "ENSE00001256752.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14841 chr22 HAVANA exon 24574021 24574596 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 37; exon_id "ENSE00001257253.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14842 chr22 HAVANA CDS 24574021 24574161 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 37; exon_id "ENSE00001257253.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14843 chr22 HAVANA stop_codon 24574162 24574164 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; exon_number 37; exon_id "ENSE00001257253.2"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14844 chr22 HAVANA UTR 24407765 24407817 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14845 chr22 HAVANA UTR 24431892 24431965 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14846 chr22 HAVANA UTR 24574162 24574596 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000263119.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-014"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000340949.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14847 chr22 HAVANA transcript 24407798 24574596 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14848 chr22 HAVANA exon 24407798 24407817 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 1; exon_id "ENSE00001636855.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14849 chr22 HAVANA exon 24431892 24431968 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 2; exon_id "ENSE00001361081.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14850 chr22 HAVANA CDS 24431966 24431968 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 2; exon_id "ENSE00001361081.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14851 chr22 HAVANA start_codon 24431966 24431968 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 2; exon_id "ENSE00001361081.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14852 chr22 HAVANA exon 24432537 24432629 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 3; exon_id "ENSE00001257233.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14853 chr22 HAVANA CDS 24432537 24432629 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 3; exon_id "ENSE00001257233.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14854 chr22 HAVANA exon 24434796 24434909 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 4; exon_id "ENSE00000651602.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14855 chr22 HAVANA CDS 24434796 24434909 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 4; exon_id "ENSE00000651602.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14856 chr22 HAVANA exon 24437587 24437721 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 5; exon_id "ENSE00000651603.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14857 chr22 HAVANA CDS 24437587 24437721 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 5; exon_id "ENSE00000651603.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14858 chr22 HAVANA exon 24439366 24439546 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 6; exon_id "ENSE00000651604.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14859 chr22 HAVANA CDS 24439366 24439546 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 6; exon_id "ENSE00000651604.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14860 chr22 HAVANA exon 24445553 24445682 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 7; exon_id "ENSE00000651605.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14861 chr22 HAVANA CDS 24445553 24445682 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 7; exon_id "ENSE00000651605.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14862 chr22 HAVANA exon 24451336 24451622 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 8; exon_id "ENSE00000651607.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14863 chr22 HAVANA CDS 24451336 24451622 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 8; exon_id "ENSE00000651607.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14864 chr22 HAVANA exon 24452655 24452823 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 9; exon_id "ENSE00000651608.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14865 chr22 HAVANA CDS 24452655 24452823 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 9; exon_id "ENSE00000651608.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14866 chr22 HAVANA exon 24455690 24455826 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 10; exon_id "ENSE00000651609.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14867 chr22 HAVANA CDS 24455690 24455826 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 10; exon_id "ENSE00000651609.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14868 chr22 HAVANA exon 24456387 24456604 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 11; exon_id "ENSE00000651610.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14869 chr22 HAVANA CDS 24456387 24456604 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 11; exon_id "ENSE00000651610.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14870 chr22 HAVANA exon 24458410 24458488 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 12; exon_id "ENSE00000651611.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14871 chr22 HAVANA CDS 24458410 24458488 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 12; exon_id "ENSE00000651611.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14872 chr22 HAVANA exon 24459422 24459609 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 13; exon_id "ENSE00000651612.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14873 chr22 HAVANA CDS 24459422 24459609 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 13; exon_id "ENSE00000651612.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14874 chr22 HAVANA exon 24460498 24460650 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 14; exon_id "ENSE00000651613.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14875 chr22 HAVANA CDS 24460498 24460650 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 14; exon_id "ENSE00000651613.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14876 chr22 HAVANA exon 24462938 24463132 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 15; exon_id "ENSE00001256688.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14877 chr22 HAVANA CDS 24462938 24463132 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 15; exon_id "ENSE00001256688.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14878 chr22 HAVANA exon 24466751 24466993 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 16; exon_id "ENSE00000651615.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14879 chr22 HAVANA CDS 24466751 24466993 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 16; exon_id "ENSE00000651615.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14880 chr22 HAVANA exon 24468304 24468460 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 17; exon_id "ENSE00000651616.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14881 chr22 HAVANA CDS 24468304 24468460 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 17; exon_id "ENSE00000651616.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14882 chr22 HAVANA exon 24472118 24472233 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 18; exon_id "ENSE00000651617.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14883 chr22 HAVANA CDS 24472118 24472233 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 18; exon_id "ENSE00000651617.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14884 chr22 HAVANA exon 24479181 24479342 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 19; exon_id "ENSE00000651618.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14885 chr22 HAVANA CDS 24479181 24479342 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 19; exon_id "ENSE00000651618.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14886 chr22 HAVANA exon 24480532 24480738 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 20; exon_id "ENSE00000651619.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14887 chr22 HAVANA CDS 24480532 24480738 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 20; exon_id "ENSE00000651619.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14888 chr22 HAVANA exon 24480959 24481104 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 21; exon_id "ENSE00000651620.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14889 chr22 HAVANA CDS 24480959 24481104 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 21; exon_id "ENSE00000651620.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14890 chr22 HAVANA exon 24483405 24483666 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 22; exon_id "ENSE00000651622.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14891 chr22 HAVANA CDS 24483405 24483666 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 22; exon_id "ENSE00000651622.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14892 chr22 HAVANA exon 24487537 24487797 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 23; exon_id "ENSE00000651625.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14893 chr22 HAVANA CDS 24487537 24487797 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 23; exon_id "ENSE00000651625.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14894 chr22 HAVANA exon 24491894 24492045 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 24; exon_id "ENSE00000651626.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14895 chr22 HAVANA CDS 24491894 24492045 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 24; exon_id "ENSE00000651626.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14896 chr22 HAVANA exon 24493977 24494068 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 25; exon_id "ENSE00001562997.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14897 chr22 HAVANA CDS 24493977 24494068 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 25; exon_id "ENSE00001562997.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14898 chr22 HAVANA exon 24509533 24509715 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 26; exon_id "ENSE00003539870.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14899 chr22 HAVANA CDS 24509533 24509715 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 26; exon_id "ENSE00003539870.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14900 chr22 HAVANA exon 24515334 24515665 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 27; exon_id "ENSE00000651631.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14901 chr22 HAVANA CDS 24515334 24515665 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 27; exon_id "ENSE00000651631.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14902 chr22 HAVANA exon 24530269 24530382 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 28; exon_id "ENSE00000651632.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14903 chr22 HAVANA CDS 24530269 24530382 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 28; exon_id "ENSE00000651632.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14904 chr22 HAVANA exon 24560368 24560531 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 29; exon_id "ENSE00000651635.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14905 chr22 HAVANA CDS 24560368 24560531 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 29; exon_id "ENSE00000651635.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14906 chr22 HAVANA exon 24561498 24561594 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 30; exon_id "ENSE00000879517.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14907 chr22 HAVANA CDS 24561498 24561594 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 30; exon_id "ENSE00000879517.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14908 chr22 HAVANA exon 24562607 24563281 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 31; exon_id "ENSE00000879518.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14909 chr22 HAVANA CDS 24562607 24563281 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 31; exon_id "ENSE00000879518.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14910 chr22 HAVANA exon 24564415 24564489 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 32; exon_id "ENSE00003521419.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14911 chr22 HAVANA CDS 24564415 24564489 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 32; exon_id "ENSE00003521419.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14912 chr22 HAVANA exon 24567681 24567963 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 33; exon_id "ENSE00003567260.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14913 chr22 HAVANA CDS 24567681 24567963 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 33; exon_id "ENSE00003567260.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14914 chr22 HAVANA exon 24572079 24572243 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 34; exon_id "ENSE00000651649.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14915 chr22 HAVANA CDS 24572079 24572243 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 34; exon_id "ENSE00000651649.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14916 chr22 HAVANA exon 24573472 24573785 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 35; exon_id "ENSE00001256752.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14917 chr22 HAVANA CDS 24573472 24573785 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 35; exon_id "ENSE00001256752.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14918 chr22 HAVANA exon 24574021 24574596 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 36; exon_id "ENSE00001257253.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14919 chr22 HAVANA CDS 24574021 24574161 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 36; exon_id "ENSE00001257253.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14920 chr22 HAVANA stop_codon 24574162 24574164 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; exon_number 36; exon_id "ENSE00001257253.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14921 chr22 HAVANA UTR 24407798 24407817 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14922 chr22 HAVANA UTR 24431892 24431965 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14923 chr22 HAVANA UTR 24574162 24574596 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000405822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-002"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320162.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14924 chr22 HAVANA transcript 24407866 24452781 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14925 chr22 HAVANA exon 24407866 24408178 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 1; exon_id "ENSE00001647985.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14926 chr22 HAVANA exon 24431892 24431968 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 2; exon_id "ENSE00001361081.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14927 chr22 HAVANA CDS 24431966 24431968 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 2; exon_id "ENSE00001361081.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14928 chr22 HAVANA start_codon 24431966 24431968 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 2; exon_id "ENSE00001361081.2"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14929 chr22 HAVANA exon 24432537 24432629 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 3; exon_id "ENSE00001257233.3"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14930 chr22 HAVANA CDS 24432537 24432629 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 3; exon_id "ENSE00001257233.3"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14931 chr22 HAVANA exon 24434796 24434909 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 4; exon_id "ENSE00000651602.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14932 chr22 HAVANA CDS 24434796 24434909 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 4; exon_id "ENSE00000651602.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14933 chr22 HAVANA exon 24439366 24439546 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 5; exon_id "ENSE00000651604.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14934 chr22 HAVANA CDS 24439366 24439546 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 5; exon_id "ENSE00000651604.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14935 chr22 HAVANA exon 24445553 24445682 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 6; exon_id "ENSE00000651605.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14936 chr22 HAVANA CDS 24445553 24445682 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 6; exon_id "ENSE00000651605.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14937 chr22 HAVANA exon 24447287 24447436 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 7; exon_id "ENSE00000651606.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14938 chr22 HAVANA CDS 24447287 24447436 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 7; exon_id "ENSE00000651606.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14939 chr22 HAVANA exon 24451336 24451622 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 8; exon_id "ENSE00000651607.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14940 chr22 HAVANA CDS 24451336 24451622 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 8; exon_id "ENSE00000651607.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14941 chr22 HAVANA exon 24452655 24452781 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 9; exon_id "ENSE00001745156.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14942 chr22 HAVANA CDS 24452655 24452781 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; exon_number 9; exon_id "ENSE00001745156.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14943 chr22 HAVANA UTR 24407866 24408178 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14944 chr22 HAVANA UTR 24431892 24431965 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000445422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CABIN1-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320163.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14945 chr22 HAVANA transcript 24407868 24574596 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14946 chr22 HAVANA exon 24407868 24408178 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 1; exon_id "ENSE00001631216.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14947 chr22 HAVANA exon 24431892 24431968 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 2; exon_id "ENSE00001361081.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14948 chr22 HAVANA CDS 24431966 24431968 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 2; exon_id "ENSE00001361081.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14949 chr22 HAVANA start_codon 24431966 24431968 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 2; exon_id "ENSE00001361081.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14950 chr22 HAVANA exon 24432537 24432629 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 3; exon_id "ENSE00001257233.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14951 chr22 HAVANA CDS 24432537 24432629 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 3; exon_id "ENSE00001257233.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14952 chr22 HAVANA exon 24434796 24434909 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 4; exon_id "ENSE00000651602.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14953 chr22 HAVANA CDS 24434796 24434909 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 4; exon_id "ENSE00000651602.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14954 chr22 HAVANA exon 24437587 24437721 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 5; exon_id "ENSE00000651603.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14955 chr22 HAVANA CDS 24437587 24437721 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 5; exon_id "ENSE00000651603.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14956 chr22 HAVANA exon 24439366 24439546 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 6; exon_id "ENSE00000651604.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14957 chr22 HAVANA CDS 24439366 24439546 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 6; exon_id "ENSE00000651604.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14958 chr22 HAVANA exon 24445553 24445682 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 7; exon_id "ENSE00000651605.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14959 chr22 HAVANA CDS 24445553 24445682 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 7; exon_id "ENSE00000651605.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14960 chr22 HAVANA exon 24447287 24447436 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 8; exon_id "ENSE00000651606.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14961 chr22 HAVANA CDS 24447287 24447436 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 8; exon_id "ENSE00000651606.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14962 chr22 HAVANA exon 24451336 24451622 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 9; exon_id "ENSE00000651607.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14963 chr22 HAVANA CDS 24451336 24451622 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 9; exon_id "ENSE00000651607.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14964 chr22 HAVANA exon 24452655 24452823 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 10; exon_id "ENSE00000651608.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14965 chr22 HAVANA CDS 24452655 24452823 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 10; exon_id "ENSE00000651608.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14966 chr22 HAVANA exon 24455690 24455826 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 11; exon_id "ENSE00000651609.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14967 chr22 HAVANA CDS 24455690 24455826 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 11; exon_id "ENSE00000651609.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14968 chr22 HAVANA exon 24456387 24456604 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 12; exon_id "ENSE00000651610.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14969 chr22 HAVANA CDS 24456387 24456604 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 12; exon_id "ENSE00000651610.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14970 chr22 HAVANA exon 24458410 24458488 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 13; exon_id "ENSE00000651611.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14971 chr22 HAVANA CDS 24458410 24458488 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 13; exon_id "ENSE00000651611.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14972 chr22 HAVANA exon 24459422 24459609 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 14; exon_id "ENSE00000651612.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14973 chr22 HAVANA CDS 24459422 24459609 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 14; exon_id "ENSE00000651612.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14974 chr22 HAVANA exon 24460498 24460650 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 15; exon_id "ENSE00000651613.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14975 chr22 HAVANA CDS 24460498 24460650 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 15; exon_id "ENSE00000651613.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14976 chr22 HAVANA exon 24462938 24463132 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 16; exon_id "ENSE00001256688.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14977 chr22 HAVANA CDS 24462938 24463132 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 16; exon_id "ENSE00001256688.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14978 chr22 HAVANA exon 24466751 24466993 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 17; exon_id "ENSE00000651615.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14979 chr22 HAVANA CDS 24466751 24466993 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 17; exon_id "ENSE00000651615.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14980 chr22 HAVANA exon 24468304 24468460 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 18; exon_id "ENSE00000651616.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14981 chr22 HAVANA CDS 24468304 24468460 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 18; exon_id "ENSE00000651616.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14982 chr22 HAVANA exon 24472118 24472233 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 19; exon_id "ENSE00000651617.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14983 chr22 HAVANA CDS 24472118 24472233 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 19; exon_id "ENSE00000651617.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14984 chr22 HAVANA exon 24479181 24479342 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 20; exon_id "ENSE00000651618.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14985 chr22 HAVANA CDS 24479181 24479342 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 20; exon_id "ENSE00000651618.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14986 chr22 HAVANA exon 24480532 24480738 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 21; exon_id "ENSE00000651619.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14987 chr22 HAVANA CDS 24480532 24480738 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 21; exon_id "ENSE00000651619.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14988 chr22 HAVANA exon 24480959 24481104 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 22; exon_id "ENSE00000651620.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14989 chr22 HAVANA CDS 24480959 24481104 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 22; exon_id "ENSE00000651620.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14990 chr22 HAVANA exon 24483405 24483666 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 23; exon_id "ENSE00000651622.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14991 chr22 HAVANA CDS 24483405 24483666 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 23; exon_id "ENSE00000651622.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14992 chr22 HAVANA exon 24487537 24487797 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 24; exon_id "ENSE00000651625.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14993 chr22 HAVANA CDS 24487537 24487797 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 24; exon_id "ENSE00000651625.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14994 chr22 HAVANA exon 24491894 24492045 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 25; exon_id "ENSE00000651626.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14995 chr22 HAVANA CDS 24491894 24492045 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 25; exon_id "ENSE00000651626.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14996 chr22 HAVANA exon 24493977 24494155 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 26; exon_id "ENSE00000651628.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14997 chr22 HAVANA CDS 24493977 24494155 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 26; exon_id "ENSE00000651628.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14998 chr22 HAVANA exon 24509533 24509715 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 27; exon_id "ENSE00003539870.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
14999 chr22 HAVANA CDS 24509533 24509715 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 27; exon_id "ENSE00003539870.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15000 chr22 HAVANA exon 24515334 24515665 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 28; exon_id "ENSE00000651631.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15001 chr22 HAVANA CDS 24515334 24515665 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 28; exon_id "ENSE00000651631.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15002 chr22 HAVANA exon 24530269 24530382 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 29; exon_id "ENSE00000651632.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15003 chr22 HAVANA CDS 24530269 24530382 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 29; exon_id "ENSE00000651632.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15004 chr22 HAVANA exon 24560368 24560531 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 30; exon_id "ENSE00000651635.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15005 chr22 HAVANA CDS 24560368 24560531 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 30; exon_id "ENSE00000651635.3"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15006 chr22 HAVANA exon 24561498 24561594 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 31; exon_id "ENSE00000879517.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15007 chr22 HAVANA CDS 24561498 24561594 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 31; exon_id "ENSE00000879517.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15008 chr22 HAVANA exon 24562607 24563281 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 32; exon_id "ENSE00000879518.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15009 chr22 HAVANA CDS 24562607 24563281 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 32; exon_id "ENSE00000879518.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15010 chr22 HAVANA exon 24564415 24564489 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 33; exon_id "ENSE00003521419.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15011 chr22 HAVANA CDS 24564415 24564489 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 33; exon_id "ENSE00003521419.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15012 chr22 HAVANA exon 24567681 24567963 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 34; exon_id "ENSE00003567260.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15013 chr22 HAVANA CDS 24567681 24567963 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 34; exon_id "ENSE00003567260.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15014 chr22 HAVANA exon 24572079 24572243 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 35; exon_id "ENSE00000651649.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15015 chr22 HAVANA CDS 24572079 24572243 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 35; exon_id "ENSE00000651649.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15016 chr22 HAVANA exon 24573472 24573785 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 36; exon_id "ENSE00001256752.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15017 chr22 HAVANA CDS 24573472 24573785 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 36; exon_id "ENSE00001256752.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15018 chr22 HAVANA exon 24574021 24574596 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 37; exon_id "ENSE00001257253.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15019 chr22 HAVANA CDS 24574021 24574161 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 37; exon_id "ENSE00001257253.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15020 chr22 HAVANA stop_codon 24574162 24574164 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; exon_number 37; exon_id "ENSE00001257253.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15021 chr22 HAVANA UTR 24407868 24408178 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15022 chr22 HAVANA UTR 24431892 24431965 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15023 chr22 HAVANA UTR 24574162 24574596 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000398319.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CABIN1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13823.1"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320161.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15024 chr22 HAVANA transcript 24451531 24452988 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000474981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-009"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320169.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15025 chr22 HAVANA exon 24451531 24451622 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000474981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-009"; exon_number 1; exon_id "ENSE00001860175.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320169.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15026 chr22 HAVANA exon 24452655 24452988 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000474981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-009"; exon_number 2; exon_id "ENSE00001874577.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320169.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15027 chr22 HAVANA transcript 24462956 24467134 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000484593.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-010"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320170.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15028 chr22 HAVANA exon 24462956 24463132 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000484593.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-010"; exon_number 1; exon_id "ENSE00001832773.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320170.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15029 chr22 HAVANA exon 24466751 24467134 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000484593.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-010"; exon_number 2; exon_id "ENSE00001812326.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320170.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15030 chr22 HAVANA transcript 24483541 24487967 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000496016.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-011"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320171.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15031 chr22 HAVANA exon 24483541 24483666 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000496016.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-011"; exon_number 1; exon_id "ENSE00001827315.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320171.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15032 chr22 HAVANA exon 24487537 24487967 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000496016.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-011"; exon_number 2; exon_id "ENSE00001842498.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320171.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15033 chr22 HAVANA transcript 24494076 24515573 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000467937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-012"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15034 chr22 HAVANA exon 24494076 24494245 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000467937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-012"; exon_number 1; exon_id "ENSE00001836479.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15035 chr22 HAVANA exon 24509533 24509715 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000467937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-012"; exon_number 2; exon_id "ENSE00003643665.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15036 chr22 HAVANA exon 24515334 24515573 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000467937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-012"; exon_number 3; exon_id "ENSE00001854833.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320172.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15037 chr22 HAVANA transcript 24551806 24574595 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15038 chr22 HAVANA exon 24551806 24552044 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 1; exon_id "ENSE00001554164.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15039 chr22 HAVANA CDS 24552024 24552044 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 1; exon_id "ENSE00001554164.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15040 chr22 HAVANA start_codon 24552024 24552026 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 1; exon_id "ENSE00001554164.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15041 chr22 HAVANA exon 24560368 24560531 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 2; exon_id "ENSE00000651635.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15042 chr22 HAVANA CDS 24560368 24560531 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 2; exon_id "ENSE00000651635.3"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15043 chr22 HAVANA exon 24561498 24561594 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 3; exon_id "ENSE00000879517.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15044 chr22 HAVANA CDS 24561498 24561594 . + 1 gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 3; exon_id "ENSE00000879517.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15045 chr22 HAVANA exon 24562607 24563281 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 4; exon_id "ENSE00000879518.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15046 chr22 HAVANA CDS 24562607 24563281 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 4; exon_id "ENSE00000879518.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15047 chr22 HAVANA exon 24564415 24564489 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 5; exon_id "ENSE00003521419.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15048 chr22 HAVANA CDS 24564415 24564489 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 5; exon_id "ENSE00003521419.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15049 chr22 HAVANA exon 24567681 24567963 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 6; exon_id "ENSE00003567260.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15050 chr22 HAVANA CDS 24567681 24567963 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 6; exon_id "ENSE00003567260.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15051 chr22 HAVANA exon 24573472 24573785 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 7; exon_id "ENSE00001256752.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15052 chr22 HAVANA CDS 24573472 24573785 . + 2 gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 7; exon_id "ENSE00001256752.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15053 chr22 HAVANA exon 24574021 24574595 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 8; exon_id "ENSE00001871329.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15054 chr22 HAVANA CDS 24574021 24574161 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 8; exon_id "ENSE00001871329.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15055 chr22 HAVANA stop_codon 24574162 24574164 . + 0 gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; exon_number 8; exon_id "ENSE00001871329.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15056 chr22 HAVANA UTR 24551806 24552023 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15057 chr22 HAVANA UTR 24574162 24574595 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000337989.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CABIN1-004"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320164.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15058 chr22 HAVANA transcript 24552501 24560457 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000495121.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CABIN1-005"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320165.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15059 chr22 HAVANA exon 24552501 24552544 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000495121.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CABIN1-005"; exon_number 1; exon_id "ENSE00001958504.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320165.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15060 chr22 HAVANA exon 24556298 24556374 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000495121.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CABIN1-005"; exon_number 2; exon_id "ENSE00001933159.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320165.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15061 chr22 HAVANA exon 24558034 24558183 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000495121.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CABIN1-005"; exon_number 3; exon_id "ENSE00001858907.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320165.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15062 chr22 HAVANA exon 24560368 24560457 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000495121.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CABIN1-005"; exon_number 4; exon_id "ENSE00001820077.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320165.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15063 chr22 HAVANA transcript 24563191 24569366 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000485008.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CABIN1-006"; level 2; tag "basic"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320166.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15064 chr22 HAVANA exon 24563191 24563281 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000485008.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CABIN1-006"; exon_number 1; exon_id "ENSE00001915593.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320166.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15065 chr22 HAVANA exon 24564415 24564489 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000485008.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CABIN1-006"; exon_number 2; exon_id "ENSE00003590078.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320166.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15066 chr22 HAVANA exon 24567681 24567963 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000485008.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CABIN1-006"; exon_number 3; exon_id "ENSE00003522807.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320166.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15067 chr22 HAVANA exon 24569045 24569366 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000485008.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CABIN1-006"; exon_number 4; exon_id "ENSE00001833835.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320166.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15068 chr22 HAVANA transcript 24571747 24573506 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000459824.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-007"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15069 chr22 HAVANA exon 24571747 24572243 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000459824.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-007"; exon_number 1; exon_id "ENSE00001846858.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15070 chr22 HAVANA exon 24573472 24573506 . + . gene_id "ENSG00000099991.12"; transcript_id "ENST00000459824.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CABIN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CABIN1-007"; exon_number 2; exon_id "ENSE00001915723.1"; level 2; havana_gene "OTTHUMG00000150797.4"; havana_transcript "OTTHUMT00000320167.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15071 chr22 HAVANA gene 24497652 24499317 . + . gene_id "ENSG00000232545.1"; transcript_id "ENSG00000232545.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "KB-318B8.7"; transcript_type "sense_intronic"; transcript_status "NOVEL"; transcript_name "KB-318B8.7"; level 2; havana_gene "OTTHUMG00000150809.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15072 chr22 HAVANA transcript 24497652 24499317 . + . gene_id "ENSG00000232545.1"; transcript_id "ENST00000444093.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "KB-318B8.7"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "KB-318B8.7-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150809.1"; havana_transcript "OTTHUMT00000320173.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15073 chr22 HAVANA exon 24497652 24497700 . + . gene_id "ENSG00000232545.1"; transcript_id "ENST00000444093.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "KB-318B8.7"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "KB-318B8.7-001"; exon_number 1; exon_id "ENSE00001598524.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150809.1"; havana_transcript "OTTHUMT00000320173.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15074 chr22 HAVANA exon 24498175 24498365 . + . gene_id "ENSG00000232545.1"; transcript_id "ENST00000444093.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "KB-318B8.7"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "KB-318B8.7-001"; exon_number 2; exon_id "ENSE00001638455.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150809.1"; havana_transcript "OTTHUMT00000320173.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15075 chr22 HAVANA exon 24499000 24499317 . + . gene_id "ENSG00000232545.1"; transcript_id "ENST00000444093.1"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "KB-318B8.7"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "KB-318B8.7-001"; exon_number 3; exon_id "ENSE00001709694.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150809.1"; havana_transcript "OTTHUMT00000320173.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15076 chr22 HAVANA gene 24577227 24585078 . + . gene_id "ENSG00000099994.10"; transcript_id "ENSG00000099994.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2"; level 2; havana_gene "OTTHUMG00000150792.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15077 chr22 HAVANA transcript 24577227 24585078 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15078 chr22 HAVANA exon 24577227 24577563 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 1; exon_id "ENSE00000651656.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15079 chr22 HAVANA CDS 24577488 24577563 . + 0 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 1; exon_id "ENSE00000651656.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15080 chr22 HAVANA start_codon 24577488 24577490 . + 0 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 1; exon_id "ENSE00000651656.5"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15081 chr22 HAVANA exon 24579025 24579235 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 2; exon_id "ENSE00001657986.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15082 chr22 HAVANA CDS 24579025 24579235 . + 2 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 2; exon_id "ENSE00001657986.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15083 chr22 HAVANA exon 24579463 24579614 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 3; exon_id "ENSE00000651658.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15084 chr22 HAVANA CDS 24579463 24579614 . + 1 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 3; exon_id "ENSE00000651658.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15085 chr22 HAVANA exon 24580104 24580271 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 4; exon_id "ENSE00000651659.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15086 chr22 HAVANA CDS 24580104 24580271 . + 2 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 4; exon_id "ENSE00000651659.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15087 chr22 HAVANA exon 24580734 24580908 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 5; exon_id "ENSE00003537597.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15088 chr22 HAVANA CDS 24580734 24580908 . + 2 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 5; exon_id "ENSE00003537597.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15089 chr22 HAVANA exon 24581062 24581263 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 6; exon_id "ENSE00003658555.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15090 chr22 HAVANA CDS 24581062 24581263 . + 1 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 6; exon_id "ENSE00003658555.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15091 chr22 HAVANA exon 24581454 24581539 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 7; exon_id "ENSE00003584084.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15092 chr22 HAVANA CDS 24581454 24581539 . + 0 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 7; exon_id "ENSE00003584084.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15093 chr22 HAVANA exon 24581629 24581897 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 8; exon_id "ENSE00003692948.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15094 chr22 HAVANA CDS 24581629 24581897 . + 1 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 8; exon_id "ENSE00003692948.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15095 chr22 HAVANA exon 24581984 24582127 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 9; exon_id "ENSE00003643487.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15096 chr22 HAVANA CDS 24581984 24582127 . + 2 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 9; exon_id "ENSE00003643487.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15097 chr22 HAVANA exon 24582225 24582383 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 10; exon_id "ENSE00000651665.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15098 chr22 HAVANA CDS 24582225 24582383 . + 2 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 10; exon_id "ENSE00000651665.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15099 chr22 HAVANA exon 24583170 24583418 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 11; exon_id "ENSE00000651666.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15100 chr22 HAVANA CDS 24583170 24583418 . + 2 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 11; exon_id "ENSE00000651666.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15101 chr22 HAVANA exon 24583539 24583811 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 12; exon_id "ENSE00000651667.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15102 chr22 HAVANA CDS 24583539 24583811 . + 2 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 12; exon_id "ENSE00000651667.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15103 chr22 HAVANA exon 24583927 24584103 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 13; exon_id "ENSE00003619757.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15104 chr22 HAVANA CDS 24583927 24584103 . + 2 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 13; exon_id "ENSE00003619757.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15105 chr22 HAVANA exon 24584193 24584295 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 14; exon_id "ENSE00003634241.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15106 chr22 HAVANA CDS 24584193 24584295 . + 2 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 14; exon_id "ENSE00003634241.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15107 chr22 HAVANA exon 24584380 24585078 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 15; exon_id "ENSE00001889241.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15108 chr22 HAVANA CDS 24584380 24584401 . + 1 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 15; exon_id "ENSE00001889241.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15109 chr22 HAVANA stop_codon 24584402 24584404 . + 0 gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; exon_number 15; exon_id "ENSE00001889241.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15110 chr22 HAVANA UTR 24577227 24577487 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15111 chr22 HAVANA UTR 24584402 24585078 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000358321.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUSD2-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13824.1"; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320088.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15112 chr22 HAVANA transcript 24578545 24585074 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000463101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SUSD2-002"; level 2; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15113 chr22 HAVANA exon 24578545 24579235 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000463101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SUSD2-002"; exon_number 1; exon_id "ENSE00001957140.1"; level 2; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15114 chr22 HAVANA exon 24579463 24580271 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000463101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SUSD2-002"; exon_number 2; exon_id "ENSE00001949729.1"; level 2; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15115 chr22 HAVANA exon 24580734 24580908 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000463101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SUSD2-002"; exon_number 3; exon_id "ENSE00003491096.1"; level 2; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15116 chr22 HAVANA exon 24581062 24581263 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000463101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SUSD2-002"; exon_number 4; exon_id "ENSE00003590989.1"; level 2; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15117 chr22 HAVANA exon 24581454 24581539 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000463101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SUSD2-002"; exon_number 5; exon_id "ENSE00003590545.1"; level 2; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15118 chr22 HAVANA exon 24581629 24581897 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000463101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SUSD2-002"; exon_number 6; exon_id "ENSE00003564235.1"; level 2; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15119 chr22 HAVANA exon 24581984 24582127 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000463101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SUSD2-002"; exon_number 7; exon_id "ENSE00003544616.1"; level 2; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15120 chr22 HAVANA exon 24582225 24583811 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000463101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SUSD2-002"; exon_number 8; exon_id "ENSE00001825576.1"; level 2; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15121 chr22 HAVANA exon 24583927 24584103 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000463101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SUSD2-002"; exon_number 9; exon_id "ENSE00003658159.1"; level 2; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15122 chr22 HAVANA exon 24584193 24584295 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000463101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SUSD2-002"; exon_number 10; exon_id "ENSE00003494139.1"; level 2; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15123 chr22 HAVANA exon 24584380 24585074 . + . gene_id "ENSG00000099994.10"; transcript_id "ENST00000463101.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUSD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SUSD2-002"; exon_number 11; exon_id "ENSE00001109029.6"; level 2; havana_gene "OTTHUMG00000150792.1"; havana_transcript "OTTHUMT00000320089.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15124 chr22 HAVANA gene 24615622 24641110 . - . gene_id "ENSG00000099998.13"; transcript_id "ENSG00000099998.13"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5"; level 2; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15125 chr22 HAVANA transcript 24615622 24641046 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15126 chr22 HAVANA exon 24640521 24641046 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 1; exon_id "ENSE00001816789.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15127 chr22 HAVANA CDS 24640521 24640693 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 1; exon_id "ENSE00001816789.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15128 chr22 HAVANA start_codon 24640691 24640693 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 1; exon_id "ENSE00001816789.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15129 chr22 HAVANA exon 24629842 24629972 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 2; exon_id "ENSE00000910941.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15130 chr22 HAVANA CDS 24629842 24629972 . - 1 gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 2; exon_id "ENSE00000910941.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15131 chr22 HAVANA exon 24628791 24628986 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 3; exon_id "ENSE00003644772.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15132 chr22 HAVANA CDS 24628791 24628986 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 3; exon_id "ENSE00003644772.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15133 chr22 HAVANA exon 24628019 24628176 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 4; exon_id "ENSE00000879531.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15134 chr22 HAVANA CDS 24628019 24628176 . - 1 gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 4; exon_id "ENSE00000879531.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15135 chr22 HAVANA exon 24627352 24627498 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 5; exon_id "ENSE00001756157.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15136 chr22 HAVANA CDS 24627352 24627498 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 5; exon_id "ENSE00001756157.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15137 chr22 HAVANA exon 24622599 24622735 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 6; exon_id "ENSE00001714442.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15138 chr22 HAVANA CDS 24622599 24622735 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 6; exon_id "ENSE00001714442.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15139 chr22 HAVANA exon 24622044 24622234 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 7; exon_id "ENSE00001615911.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15140 chr22 HAVANA CDS 24622044 24622234 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 7; exon_id "ENSE00001615911.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15141 chr22 HAVANA exon 24621514 24621620 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 8; exon_id "ENSE00001765405.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15142 chr22 HAVANA CDS 24621514 24621620 . - 1 gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 8; exon_id "ENSE00001765405.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15143 chr22 HAVANA exon 24621213 24621379 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 9; exon_id "ENSE00001633537.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15144 chr22 HAVANA CDS 24621213 24621379 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 9; exon_id "ENSE00001633537.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15145 chr22 HAVANA exon 24620964 24621074 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 10; exon_id "ENSE00001742378.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15146 chr22 HAVANA CDS 24620964 24621074 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 10; exon_id "ENSE00001742378.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15147 chr22 HAVANA exon 24615622 24616084 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 11; exon_id "ENSE00001790030.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15148 chr22 HAVANA CDS 24615941 24616084 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 11; exon_id "ENSE00001790030.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15149 chr22 HAVANA stop_codon 24615938 24615940 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; exon_number 11; exon_id "ENSE00001790030.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15150 chr22 HAVANA UTR 24640694 24641046 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15151 chr22 HAVANA UTR 24615622 24615940 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000263112.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-002"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS42989.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320120.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15152 chr22 HAVANA transcript 24615622 24641110 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15153 chr22 HAVANA exon 24640521 24641110 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 1; exon_id "ENSE00001378316.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15154 chr22 HAVANA CDS 24640521 24640693 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 1; exon_id "ENSE00001378316.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15155 chr22 HAVANA start_codon 24640691 24640693 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 1; exon_id "ENSE00001378316.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15156 chr22 HAVANA exon 24629842 24629972 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 2; exon_id "ENSE00000910941.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15157 chr22 HAVANA CDS 24629842 24629972 . - 1 gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 2; exon_id "ENSE00000910941.3"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15158 chr22 HAVANA exon 24629466 24629561 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 3; exon_id "ENSE00000910938.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15159 chr22 HAVANA CDS 24629466 24629561 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 3; exon_id "ENSE00000910938.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15160 chr22 HAVANA exon 24628791 24628986 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 4; exon_id "ENSE00003644772.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15161 chr22 HAVANA CDS 24628791 24628986 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 4; exon_id "ENSE00003644772.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15162 chr22 HAVANA exon 24628019 24628176 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 5; exon_id "ENSE00000879531.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15163 chr22 HAVANA CDS 24628019 24628176 . - 1 gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 5; exon_id "ENSE00000879531.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15164 chr22 HAVANA exon 24627352 24627498 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 6; exon_id "ENSE00001756157.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15165 chr22 HAVANA CDS 24627352 24627498 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 6; exon_id "ENSE00001756157.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15166 chr22 HAVANA exon 24622599 24622735 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 7; exon_id "ENSE00001714442.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15167 chr22 HAVANA CDS 24622599 24622735 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 7; exon_id "ENSE00001714442.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15168 chr22 HAVANA exon 24622044 24622234 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 8; exon_id "ENSE00001615911.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15169 chr22 HAVANA CDS 24622044 24622234 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 8; exon_id "ENSE00001615911.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15170 chr22 HAVANA exon 24621514 24621620 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 9; exon_id "ENSE00001765405.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15171 chr22 HAVANA CDS 24621514 24621620 . - 1 gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 9; exon_id "ENSE00001765405.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15172 chr22 HAVANA exon 24621213 24621379 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 10; exon_id "ENSE00001633537.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15173 chr22 HAVANA CDS 24621213 24621379 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 10; exon_id "ENSE00001633537.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15174 chr22 HAVANA exon 24620964 24621074 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 11; exon_id "ENSE00001742378.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15175 chr22 HAVANA CDS 24620964 24621074 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 11; exon_id "ENSE00001742378.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15176 chr22 HAVANA exon 24615622 24616084 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 12; exon_id "ENSE00001790030.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15177 chr22 HAVANA CDS 24615941 24616084 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 12; exon_id "ENSE00001790030.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15178 chr22 HAVANA stop_codon 24615938 24615940 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; exon_number 12; exon_id "ENSE00001790030.1"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15179 chr22 HAVANA UTR 24640694 24641110 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15180 chr22 HAVANA UTR 24615622 24615940 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000327365.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-001"; level 2; tag "basic"; tag "appris_candidate"; tag "CCDS"; ccdsid "CCDS13825.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320119.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15181 chr22 HAVANA transcript 24615628 24622080 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15182 chr22 HAVANA exon 24622044 24622080 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; exon_number 1; exon_id "ENSE00001718212.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15183 chr22 HAVANA CDS 24622044 24622080 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; exon_number 1; exon_id "ENSE00001718212.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15184 chr22 HAVANA exon 24621514 24621620 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; exon_number 2; exon_id "ENSE00001765405.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15185 chr22 HAVANA CDS 24621514 24621620 . - 1 gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; exon_number 2; exon_id "ENSE00001765405.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15186 chr22 HAVANA exon 24621213 24621379 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; exon_number 3; exon_id "ENSE00001633537.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15187 chr22 HAVANA CDS 24621213 24621379 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; exon_number 3; exon_id "ENSE00001633537.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15188 chr22 HAVANA exon 24620964 24621074 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; exon_number 4; exon_id "ENSE00001742378.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15189 chr22 HAVANA CDS 24620964 24621074 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; exon_number 4; exon_id "ENSE00001742378.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15190 chr22 HAVANA exon 24616460 24616552 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; exon_number 5; exon_id "ENSE00001712392.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15191 chr22 HAVANA CDS 24616460 24616552 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; exon_number 5; exon_id "ENSE00001712392.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15192 chr22 HAVANA exon 24615628 24616084 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; exon_number 6; exon_id "ENSE00001750189.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15193 chr22 HAVANA CDS 24615941 24616084 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; exon_number 6; exon_id "ENSE00001750189.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15194 chr22 HAVANA stop_codon 24615938 24615940 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; exon_number 6; exon_id "ENSE00001750189.1"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15195 chr22 HAVANA UTR 24615628 24615940 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000425408.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320123.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15196 chr22 HAVANA transcript 24615628 24641027 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15197 chr22 HAVANA exon 24640521 24641027 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 1; exon_id "ENSE00001950575.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15198 chr22 HAVANA CDS 24640521 24640693 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 1; exon_id "ENSE00001950575.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15199 chr22 HAVANA start_codon 24640691 24640693 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 1; exon_id "ENSE00001950575.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15200 chr22 HAVANA exon 24629842 24629972 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 2; exon_id "ENSE00000910941.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15201 chr22 HAVANA CDS 24629842 24629972 . - 1 gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 2; exon_id "ENSE00000910941.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15202 chr22 HAVANA exon 24629466 24629561 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 3; exon_id "ENSE00000910938.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15203 chr22 HAVANA CDS 24629466 24629561 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 3; exon_id "ENSE00000910938.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15204 chr22 HAVANA exon 24628791 24628986 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 4; exon_id "ENSE00003644772.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15205 chr22 HAVANA CDS 24628791 24628986 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 4; exon_id "ENSE00003644772.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15206 chr22 HAVANA exon 24628019 24628176 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 5; exon_id "ENSE00000879531.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15207 chr22 HAVANA CDS 24628019 24628176 . - 1 gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 5; exon_id "ENSE00000879531.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15208 chr22 HAVANA exon 24627352 24627498 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 6; exon_id "ENSE00001756157.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15209 chr22 HAVANA CDS 24627352 24627498 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 6; exon_id "ENSE00001756157.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15210 chr22 HAVANA exon 24622599 24622735 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 7; exon_id "ENSE00001714442.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15211 chr22 HAVANA CDS 24622599 24622735 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 7; exon_id "ENSE00001714442.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15212 chr22 HAVANA exon 24622044 24622234 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 8; exon_id "ENSE00001615911.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15213 chr22 HAVANA CDS 24622044 24622234 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 8; exon_id "ENSE00001615911.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15214 chr22 HAVANA exon 24621514 24621620 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 9; exon_id "ENSE00001765405.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15215 chr22 HAVANA CDS 24621514 24621620 . - 1 gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 9; exon_id "ENSE00001765405.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15216 chr22 HAVANA exon 24621213 24621382 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 10; exon_id "ENSE00001532520.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15217 chr22 HAVANA CDS 24621213 24621382 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 10; exon_id "ENSE00001532520.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15218 chr22 HAVANA exon 24620964 24621074 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 11; exon_id "ENSE00001742378.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15219 chr22 HAVANA CDS 24620964 24621074 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 11; exon_id "ENSE00001742378.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15220 chr22 HAVANA exon 24615628 24616084 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 12; exon_id "ENSE00001750189.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15221 chr22 HAVANA CDS 24615941 24616084 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 12; exon_id "ENSE00001750189.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15222 chr22 HAVANA stop_codon 24615938 24615940 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; exon_number 12; exon_id "ENSE00001750189.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15223 chr22 HAVANA UTR 24640694 24641027 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15224 chr22 HAVANA UTR 24615628 24615940 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000398292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-003"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS42990.1"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320121.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15225 chr22 ENSEMBL transcript 24615708 24641050 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15226 chr22 ENSEMBL exon 24640521 24641050 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 1; exon_id "ENSE00001734797.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15227 chr22 ENSEMBL CDS 24640521 24640693 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 1; exon_id "ENSE00001734797.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15228 chr22 ENSEMBL start_codon 24640691 24640693 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 1; exon_id "ENSE00001734797.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15229 chr22 ENSEMBL exon 24628791 24628986 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 2; exon_id "ENSE00003622323.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15230 chr22 ENSEMBL CDS 24628791 24628986 . - 1 gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 2; exon_id "ENSE00003622323.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15231 chr22 ENSEMBL exon 24628019 24628172 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 3; exon_id "ENSE00001610143.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15232 chr22 ENSEMBL CDS 24628019 24628172 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 3; exon_id "ENSE00001610143.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15233 chr22 ENSEMBL exon 24627352 24627498 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 4; exon_id "ENSE00001756157.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15234 chr22 ENSEMBL CDS 24627352 24627498 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 4; exon_id "ENSE00001756157.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15235 chr22 ENSEMBL exon 24622599 24622735 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 5; exon_id "ENSE00001714442.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15236 chr22 ENSEMBL CDS 24622599 24622735 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 5; exon_id "ENSE00001714442.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15237 chr22 ENSEMBL exon 24622044 24622234 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 6; exon_id "ENSE00001615911.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15238 chr22 ENSEMBL CDS 24622044 24622234 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 6; exon_id "ENSE00001615911.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15239 chr22 ENSEMBL exon 24621514 24621620 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 7; exon_id "ENSE00001765405.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15240 chr22 ENSEMBL CDS 24621514 24621620 . - 1 gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 7; exon_id "ENSE00001765405.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15241 chr22 ENSEMBL exon 24621213 24621382 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 8; exon_id "ENSE00001532520.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15242 chr22 ENSEMBL CDS 24621213 24621382 . - 2 gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 8; exon_id "ENSE00001532520.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15243 chr22 ENSEMBL exon 24620964 24621074 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 9; exon_id "ENSE00001742378.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15244 chr22 ENSEMBL CDS 24620964 24621074 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 9; exon_id "ENSE00001742378.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15245 chr22 ENSEMBL exon 24615708 24616084 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 10; exon_id "ENSE00002246882.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15246 chr22 ENSEMBL CDS 24615941 24616084 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 10; exon_id "ENSE00002246882.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15247 chr22 ENSEMBL stop_codon 24615938 24615940 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; exon_number 10; exon_id "ENSE00002246882.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15248 chr22 ENSEMBL UTR 24640694 24641050 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15249 chr22 ENSEMBL UTR 24615708 24615940 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000418439.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT5-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150796.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15250 chr22 HAVANA transcript 24628941 24641050 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000424217.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320122.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15251 chr22 HAVANA exon 24640521 24641050 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000424217.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-004"; exon_number 1; exon_id "ENSE00001734797.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320122.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15252 chr22 HAVANA CDS 24640521 24640693 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000424217.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-004"; exon_number 1; exon_id "ENSE00001734797.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320122.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15253 chr22 HAVANA start_codon 24640691 24640693 . - 0 gene_id "ENSG00000099998.13"; transcript_id "ENST00000424217.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-004"; exon_number 1; exon_id "ENSE00001734797.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320122.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15254 chr22 HAVANA exon 24628941 24628986 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000424217.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-004"; exon_number 2; exon_id "ENSE00001788994.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320122.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15255 chr22 HAVANA CDS 24628941 24628986 . - 1 gene_id "ENSG00000099998.13"; transcript_id "ENST00000424217.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-004"; exon_number 2; exon_id "ENSE00001788994.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320122.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15256 chr22 HAVANA UTR 24640694 24641050 . - . gene_id "ENSG00000099998.13"; transcript_id "ENST00000424217.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT5"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GGT5-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150796.1"; havana_transcript "OTTHUMT00000320122.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15257 chr22 HAVANA gene 24644042 24645434 . - . gene_id "ENSG00000230712.2"; transcript_id "ENSG00000230712.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000354.4"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000354.4"; level 2; havana_gene "OTTHUMG00000150766.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15258 chr22 HAVANA transcript 24644042 24645434 . - . gene_id "ENSG00000230712.2"; transcript_id "ENST00000402176.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000354.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000354.4-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150766.1"; havana_transcript "OTTHUMT00000320001.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15259 chr22 HAVANA exon 24645259 24645434 . - . gene_id "ENSG00000230712.2"; transcript_id "ENST00000402176.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000354.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000354.4-001"; exon_number 1; exon_id "ENSE00001770574.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150766.1"; havana_transcript "OTTHUMT00000320001.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15260 chr22 HAVANA exon 24644899 24645026 . - . gene_id "ENSG00000230712.2"; transcript_id "ENST00000402176.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000354.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000354.4-001"; exon_number 2; exon_id "ENSE00001637701.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150766.1"; havana_transcript "OTTHUMT00000320001.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15261 chr22 HAVANA exon 24644743 24644800 . - . gene_id "ENSG00000230712.2"; transcript_id "ENST00000402176.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000354.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000354.4-001"; exon_number 3; exon_id "ENSE00001661146.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150766.1"; havana_transcript "OTTHUMT00000320001.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15262 chr22 HAVANA exon 24644491 24644644 . - . gene_id "ENSG00000230712.2"; transcript_id "ENST00000402176.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000354.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000354.4-001"; exon_number 4; exon_id "ENSE00001655227.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150766.1"; havana_transcript "OTTHUMT00000320001.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15263 chr22 HAVANA exon 24644042 24644189 . - . gene_id "ENSG00000230712.2"; transcript_id "ENST00000402176.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000354.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000354.4-001"; exon_number 5; exon_id "ENSE00001789655.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150766.1"; havana_transcript "OTTHUMT00000320001.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15264 chr22 HAVANA gene 24647796 24661493 . + . gene_id "ENSG00000128262.4"; transcript_id "ENSG00000128262.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L9P"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150763.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15265 chr22 HAVANA transcript 24647796 24661493 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000414583.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L9P-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319991.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15266 chr22 HAVANA exon 24647796 24649366 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000414583.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L9P-001"; exon_number 1; exon_id "ENSE00002333855.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319991.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15267 chr22 HAVANA exon 24652721 24652927 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000414583.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L9P-001"; exon_number 2; exon_id "ENSE00002413886.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319991.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15268 chr22 HAVANA exon 24653965 24654027 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000414583.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L9P-001"; exon_number 3; exon_id "ENSE00002415067.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319991.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15269 chr22 HAVANA exon 24654735 24654841 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000414583.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L9P-001"; exon_number 4; exon_id "ENSE00002361297.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319991.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15270 chr22 HAVANA exon 24656876 24657004 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000414583.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L9P-001"; exon_number 5; exon_id "ENSE00002394942.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319991.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15271 chr22 HAVANA exon 24657661 24658575 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000414583.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L9P-001"; exon_number 6; exon_id "ENSE00002423279.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319991.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15272 chr22 HAVANA exon 24659468 24661493 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000414583.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L9P-001"; exon_number 7; exon_id "ENSE00001821244.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319991.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15273 chr22 HAVANA transcript 24647973 24649257 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000441984.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L9P-002"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319992.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15274 chr22 HAVANA exon 24647973 24649257 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000441984.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L9P-002"; exon_number 1; exon_id "ENSE00001713326.1"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319992.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15275 chr22 HAVANA transcript 24652602 24657868 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000419222.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L9P-003"; level 2; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319993.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15276 chr22 HAVANA exon 24652602 24652927 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000419222.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L9P-003"; exon_number 1; exon_id "ENSE00001678007.1"; level 2; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319993.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15277 chr22 HAVANA exon 24654735 24654841 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000419222.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L9P-003"; exon_number 2; exon_id "ENSE00002361297.1"; level 2; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319993.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15278 chr22 HAVANA exon 24656876 24657004 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000419222.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L9P-003"; exon_number 3; exon_id "ENSE00002394942.1"; level 2; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319993.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15279 chr22 HAVANA exon 24657661 24657868 . + . gene_id "ENSG00000128262.4"; transcript_id "ENST00000419222.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L9P"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POM121L9P-003"; exon_number 4; exon_id "ENSE00001753744.1"; level 2; havana_gene "OTTHUMG00000150763.2"; havana_transcript "OTTHUMT00000319993.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15280 chr22 HAVANA gene 24655897 24659732 . - . gene_id "ENSG00000225098.1"; transcript_id "ENSG00000225098.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP1"; level 2; havana_gene "OTTHUMG00000150768.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15281 chr22 HAVANA transcript 24655897 24659732 . - . gene_id "ENSG00000225098.1"; transcript_id "ENST00000444246.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP1-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150768.1"; havana_transcript "OTTHUMT00000320005.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15282 chr22 HAVANA exon 24659536 24659732 . - . gene_id "ENSG00000225098.1"; transcript_id "ENST00000444246.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP1-001"; exon_number 1; exon_id "ENSE00001700995.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150768.1"; havana_transcript "OTTHUMT00000320005.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15283 chr22 HAVANA exon 24658397 24658531 . - . gene_id "ENSG00000225098.1"; transcript_id "ENST00000444246.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP1-001"; exon_number 2; exon_id "ENSE00001806368.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150768.1"; havana_transcript "OTTHUMT00000320005.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15284 chr22 HAVANA exon 24657346 24657451 . - . gene_id "ENSG00000225098.1"; transcript_id "ENST00000444246.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP1-001"; exon_number 3; exon_id "ENSE00001634774.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150768.1"; havana_transcript "OTTHUMT00000320005.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15285 chr22 HAVANA exon 24656707 24656869 . - . gene_id "ENSG00000225098.1"; transcript_id "ENST00000444246.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP1-001"; exon_number 4; exon_id "ENSE00001605723.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150768.1"; havana_transcript "OTTHUMT00000320005.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15286 chr22 HAVANA exon 24655897 24655986 . - . gene_id "ENSG00000225098.1"; transcript_id "ENST00000444246.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP1-001"; exon_number 5; exon_id "ENSE00001665948.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150768.1"; havana_transcript "OTTHUMT00000320005.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15287 chr22 HAVANA gene 24665314 24666102 . - . gene_id "ENSG00000215464.4"; transcript_id "ENSG00000215464.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000354.2"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000354.2"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150770.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15288 chr22 HAVANA transcript 24665314 24666102 . - . gene_id "ENSG00000215464.4"; transcript_id "ENST00000396982.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000354.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000354.2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150770.2"; havana_transcript "OTTHUMT00000320006.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15289 chr22 HAVANA exon 24665977 24666102 . - . gene_id "ENSG00000215464.4"; transcript_id "ENST00000396982.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000354.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000354.2-001"; exon_number 1; exon_id "ENSE00001526947.2"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150770.2"; havana_transcript "OTTHUMT00000320006.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15290 chr22 HAVANA exon 24665314 24665643 . - . gene_id "ENSG00000215464.4"; transcript_id "ENST00000396982.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000354.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000354.2-001"; exon_number 2; exon_id "ENSE00001788069.2"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150770.2"; havana_transcript "OTTHUMT00000320006.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15291 chr22 HAVANA gene 24666786 24813708 . + . gene_id "ENSG00000100014.15"; transcript_id "ENSG00000100014.15"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L"; level 2; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15292 chr22 ENSEMBL transcript 24666786 24813707 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15293 chr22 ENSEMBL exon 24666786 24666951 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 1; exon_id "ENSE00001783788.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15294 chr22 ENSEMBL exon 24698163 24698352 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 2; exon_id "ENSE00003491742.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15295 chr22 ENSEMBL CDS 24698200 24698352 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 2; exon_id "ENSE00003491742.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15296 chr22 ENSEMBL start_codon 24698200 24698202 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 2; exon_id "ENSE00003491742.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15297 chr22 ENSEMBL exon 24709281 24709434 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 3; exon_id "ENSE00003469662.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15298 chr22 ENSEMBL CDS 24709281 24709434 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 3; exon_id "ENSE00003469662.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15299 chr22 ENSEMBL exon 24717256 24718886 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 4; exon_id "ENSE00003514061.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15300 chr22 ENSEMBL CDS 24717256 24718886 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 4; exon_id "ENSE00003514061.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15301 chr22 ENSEMBL exon 24720188 24720395 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 5; exon_id "ENSE00003676353.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15302 chr22 ENSEMBL CDS 24720188 24720395 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 5; exon_id "ENSE00003676353.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15303 chr22 ENSEMBL exon 24724814 24724887 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 6; exon_id "ENSE00003669862.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15304 chr22 ENSEMBL CDS 24724814 24724887 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 6; exon_id "ENSE00003669862.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15305 chr22 ENSEMBL exon 24726224 24726399 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 7; exon_id "ENSE00003505841.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15306 chr22 ENSEMBL CDS 24726224 24726399 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 7; exon_id "ENSE00003505841.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15307 chr22 ENSEMBL exon 24730378 24730541 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 8; exon_id "ENSE00003473726.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15308 chr22 ENSEMBL CDS 24730378 24730541 . + 1 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 8; exon_id "ENSE00003473726.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15309 chr22 ENSEMBL exon 24734354 24734445 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 9; exon_id "ENSE00003630452.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15310 chr22 ENSEMBL CDS 24734354 24734445 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 9; exon_id "ENSE00003630452.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15311 chr22 ENSEMBL exon 24743054 24743144 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 10; exon_id "ENSE00003502222.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15312 chr22 ENSEMBL CDS 24743054 24743144 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 10; exon_id "ENSE00003502222.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15313 chr22 ENSEMBL exon 24759229 24759312 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 11; exon_id "ENSE00003475905.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15314 chr22 ENSEMBL CDS 24759229 24759312 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 11; exon_id "ENSE00003475905.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15315 chr22 ENSEMBL exon 24761444 24761600 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 12; exon_id "ENSE00003522695.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15316 chr22 ENSEMBL CDS 24761444 24761600 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 12; exon_id "ENSE00003522695.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15317 chr22 ENSEMBL exon 24765186 24765288 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 13; exon_id "ENSE00003632304.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15318 chr22 ENSEMBL CDS 24765186 24765288 . + 1 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 13; exon_id "ENSE00003632304.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15319 chr22 ENSEMBL exon 24807556 24807672 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 14; exon_id "ENSE00003549033.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15320 chr22 ENSEMBL CDS 24807556 24807672 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 14; exon_id "ENSE00003549033.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15321 chr22 ENSEMBL exon 24808616 24808675 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 15; exon_id "ENSE00003638836.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15322 chr22 ENSEMBL CDS 24808616 24808675 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 15; exon_id "ENSE00003638836.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15323 chr22 ENSEMBL exon 24810502 24813707 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 16; exon_id "ENSE00001252567.4"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15324 chr22 ENSEMBL CDS 24810502 24810588 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 16; exon_id "ENSE00001252567.4"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15325 chr22 ENSEMBL stop_codon 24810589 24810591 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; exon_number 16; exon_id "ENSE00001252567.4"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15326 chr22 ENSEMBL UTR 24666786 24666951 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15327 chr22 ENSEMBL UTR 24698163 24698199 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15328 chr22 ENSEMBL UTR 24810589 24813707 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000437398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-201"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15329 chr22 HAVANA transcript 24666790 24726369 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15330 chr22 HAVANA exon 24666790 24666951 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; exon_number 1; exon_id "ENSE00001654521.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15331 chr22 HAVANA exon 24698163 24698352 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; exon_number 2; exon_id "ENSE00003491742.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15332 chr22 HAVANA CDS 24698200 24698352 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; exon_number 2; exon_id "ENSE00003491742.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15333 chr22 HAVANA start_codon 24698200 24698202 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; exon_number 2; exon_id "ENSE00003491742.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15334 chr22 HAVANA exon 24709281 24709434 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; exon_number 3; exon_id "ENSE00003469662.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15335 chr22 HAVANA CDS 24709281 24709434 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; exon_number 3; exon_id "ENSE00003469662.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15336 chr22 HAVANA exon 24717256 24718886 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; exon_number 4; exon_id "ENSE00003514061.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15337 chr22 HAVANA CDS 24717256 24718886 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; exon_number 4; exon_id "ENSE00003514061.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15338 chr22 HAVANA exon 24720188 24720395 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; exon_number 5; exon_id "ENSE00003676353.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15339 chr22 HAVANA CDS 24720188 24720395 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; exon_number 5; exon_id "ENSE00003676353.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15340 chr22 HAVANA exon 24724814 24724887 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; exon_number 6; exon_id "ENSE00003669862.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15341 chr22 HAVANA CDS 24724814 24724887 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; exon_number 6; exon_id "ENSE00003669862.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15342 chr22 HAVANA exon 24726224 24726369 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; exon_number 7; exon_id "ENSE00001777575.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15343 chr22 HAVANA CDS 24726224 24726369 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; exon_number 7; exon_id "ENSE00001777575.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15344 chr22 HAVANA UTR 24666790 24666951 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15345 chr22 HAVANA UTR 24698163 24698199 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000421374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-002"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319987.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15346 chr22 HAVANA transcript 24666808 24813708 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15347 chr22 HAVANA exon 24666808 24666951 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 1; exon_id "ENSE00001885838.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15348 chr22 HAVANA exon 24672668 24672771 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 2; exon_id "ENSE00003491336.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15349 chr22 HAVANA exon 24698163 24698352 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 3; exon_id "ENSE00003491742.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15350 chr22 HAVANA CDS 24698200 24698352 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 3; exon_id "ENSE00003491742.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15351 chr22 HAVANA start_codon 24698200 24698202 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 3; exon_id "ENSE00003491742.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15352 chr22 HAVANA exon 24709281 24709434 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 4; exon_id "ENSE00003469662.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15353 chr22 HAVANA CDS 24709281 24709434 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 4; exon_id "ENSE00003469662.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15354 chr22 HAVANA exon 24717256 24718886 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 5; exon_id "ENSE00003514061.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15355 chr22 HAVANA CDS 24717256 24718886 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 5; exon_id "ENSE00003514061.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15356 chr22 HAVANA exon 24720188 24720395 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 6; exon_id "ENSE00003676353.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15357 chr22 HAVANA CDS 24720188 24720395 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 6; exon_id "ENSE00003676353.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15358 chr22 HAVANA exon 24724814 24724887 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 7; exon_id "ENSE00003669862.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15359 chr22 HAVANA CDS 24724814 24724887 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 7; exon_id "ENSE00003669862.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15360 chr22 HAVANA exon 24726224 24726399 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 8; exon_id "ENSE00003505841.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15361 chr22 HAVANA CDS 24726224 24726399 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 8; exon_id "ENSE00003505841.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15362 chr22 HAVANA exon 24730378 24730541 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 9; exon_id "ENSE00003473726.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15363 chr22 HAVANA CDS 24730378 24730541 . + 1 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 9; exon_id "ENSE00003473726.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15364 chr22 HAVANA exon 24734354 24734445 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 10; exon_id "ENSE00003630452.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15365 chr22 HAVANA CDS 24734354 24734445 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 10; exon_id "ENSE00003630452.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15366 chr22 HAVANA exon 24743054 24743144 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 11; exon_id "ENSE00003502222.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15367 chr22 HAVANA CDS 24743054 24743144 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 11; exon_id "ENSE00003502222.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15368 chr22 HAVANA exon 24759229 24759312 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 12; exon_id "ENSE00003475905.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15369 chr22 HAVANA CDS 24759229 24759312 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 12; exon_id "ENSE00003475905.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15370 chr22 HAVANA exon 24761444 24761600 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 13; exon_id "ENSE00003522695.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15371 chr22 HAVANA CDS 24761444 24761600 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 13; exon_id "ENSE00003522695.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15372 chr22 HAVANA exon 24765186 24765288 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 14; exon_id "ENSE00003632304.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15373 chr22 HAVANA CDS 24765186 24765288 . + 1 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 14; exon_id "ENSE00003632304.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15374 chr22 HAVANA exon 24807556 24807672 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 15; exon_id "ENSE00003549033.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15375 chr22 HAVANA CDS 24807556 24807672 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 15; exon_id "ENSE00003549033.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15376 chr22 HAVANA exon 24808616 24808675 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 16; exon_id "ENSE00003638836.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15377 chr22 HAVANA CDS 24808616 24808675 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 16; exon_id "ENSE00003638836.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15378 chr22 HAVANA exon 24810502 24813708 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 17; exon_id "ENSE00001881826.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15379 chr22 HAVANA CDS 24810502 24810588 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 17; exon_id "ENSE00001881826.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15380 chr22 HAVANA stop_codon 24810589 24810591 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; exon_number 17; exon_id "ENSE00001881826.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15381 chr22 HAVANA UTR 24666808 24666951 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15382 chr22 HAVANA UTR 24672668 24672771 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15383 chr22 HAVANA UTR 24698163 24698199 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15384 chr22 HAVANA UTR 24810589 24813708 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000314328.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS33619.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319986.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15385 chr22 HAVANA transcript 24666851 24720272 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000416735.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SPECC1L-004"; level 2; tag "NMD_likely_if_extended"; tag "basic"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319989.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15386 chr22 HAVANA exon 24666851 24666951 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000416735.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SPECC1L-004"; exon_number 1; exon_id "ENSE00001655823.1"; level 2; tag "NMD_likely_if_extended"; tag "basic"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319989.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15387 chr22 HAVANA exon 24698163 24698352 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000416735.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SPECC1L-004"; exon_number 2; exon_id "ENSE00003600908.1"; level 2; tag "NMD_likely_if_extended"; tag "basic"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319989.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15388 chr22 HAVANA exon 24709281 24709434 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000416735.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SPECC1L-004"; exon_number 3; exon_id "ENSE00003549551.1"; level 2; tag "NMD_likely_if_extended"; tag "basic"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319989.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15389 chr22 HAVANA exon 24717256 24717291 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000416735.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SPECC1L-004"; exon_number 4; exon_id "ENSE00001652228.1"; level 2; tag "NMD_likely_if_extended"; tag "basic"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319989.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15390 chr22 HAVANA exon 24720188 24720272 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000416735.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SPECC1L-004"; exon_number 5; exon_id "ENSE00001769339.1"; level 2; tag "NMD_likely_if_extended"; tag "basic"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319989.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15391 chr22 HAVANA transcript 24666851 24810741 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15392 chr22 HAVANA exon 24666851 24666951 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 1; exon_id "ENSE00001655823.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15393 chr22 HAVANA exon 24698163 24698352 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 2; exon_id "ENSE00003491742.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15394 chr22 HAVANA CDS 24698200 24698352 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 2; exon_id "ENSE00003491742.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15395 chr22 HAVANA start_codon 24698200 24698202 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 2; exon_id "ENSE00003491742.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15396 chr22 HAVANA exon 24709281 24709434 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 3; exon_id "ENSE00003469662.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15397 chr22 HAVANA CDS 24709281 24709434 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 3; exon_id "ENSE00003469662.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15398 chr22 HAVANA exon 24717256 24718886 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 4; exon_id "ENSE00003514061.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15399 chr22 HAVANA CDS 24717256 24718886 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 4; exon_id "ENSE00003514061.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15400 chr22 HAVANA exon 24720188 24720395 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 5; exon_id "ENSE00003676353.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15401 chr22 HAVANA CDS 24720188 24720395 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 5; exon_id "ENSE00003676353.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15402 chr22 HAVANA exon 24724814 24724887 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 6; exon_id "ENSE00003669862.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15403 chr22 HAVANA CDS 24724814 24724887 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 6; exon_id "ENSE00003669862.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15404 chr22 HAVANA exon 24726224 24726399 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 7; exon_id "ENSE00003505841.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15405 chr22 HAVANA CDS 24726224 24726399 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 7; exon_id "ENSE00003505841.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15406 chr22 HAVANA exon 24730378 24730541 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 8; exon_id "ENSE00003473726.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15407 chr22 HAVANA CDS 24730378 24730541 . + 1 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 8; exon_id "ENSE00003473726.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15408 chr22 HAVANA exon 24734354 24734445 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 9; exon_id "ENSE00003630452.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15409 chr22 HAVANA CDS 24734354 24734445 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 9; exon_id "ENSE00003630452.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15410 chr22 HAVANA exon 24743054 24743144 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 10; exon_id "ENSE00003502222.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15411 chr22 HAVANA CDS 24743054 24743144 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 10; exon_id "ENSE00003502222.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15412 chr22 HAVANA exon 24759229 24759312 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 11; exon_id "ENSE00003475905.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15413 chr22 HAVANA CDS 24759229 24759312 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 11; exon_id "ENSE00003475905.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15414 chr22 HAVANA exon 24761444 24761600 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 12; exon_id "ENSE00003522695.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15415 chr22 HAVANA CDS 24761444 24761600 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 12; exon_id "ENSE00003522695.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15416 chr22 HAVANA exon 24765186 24765288 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 13; exon_id "ENSE00003632304.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15417 chr22 HAVANA CDS 24765186 24765288 . + 1 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 13; exon_id "ENSE00003632304.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15418 chr22 HAVANA exon 24808616 24808675 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 14; exon_id "ENSE00003638836.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15419 chr22 HAVANA CDS 24808616 24808675 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 14; exon_id "ENSE00003638836.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15420 chr22 HAVANA exon 24810502 24810741 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 15; exon_id "ENSE00002304654.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15421 chr22 HAVANA CDS 24810502 24810588 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 15; exon_id "ENSE00002304654.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15422 chr22 HAVANA stop_codon 24810589 24810591 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; exon_number 15; exon_id "ENSE00002304654.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15423 chr22 HAVANA UTR 24666851 24666951 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15424 chr22 HAVANA UTR 24698163 24698199 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15425 chr22 HAVANA UTR 24810589 24810741 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000541492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SPECC1L-006"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS58797.1"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000472823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15426 chr22 HAVANA transcript 24700364 24717656 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000440893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SPECC1L-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319988.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15427 chr22 HAVANA exon 24700364 24700420 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000440893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SPECC1L-003"; exon_number 1; exon_id "ENSE00001714097.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319988.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15428 chr22 HAVANA exon 24709281 24709434 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000440893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SPECC1L-003"; exon_number 2; exon_id "ENSE00003483653.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319988.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15429 chr22 HAVANA CDS 24709311 24709434 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000440893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SPECC1L-003"; exon_number 2; exon_id "ENSE00003483653.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319988.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15430 chr22 HAVANA start_codon 24709311 24709313 . + 0 gene_id "ENSG00000100014.15"; transcript_id "ENST00000440893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SPECC1L-003"; exon_number 2; exon_id "ENSE00003483653.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319988.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15431 chr22 HAVANA exon 24717256 24717656 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000440893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SPECC1L-003"; exon_number 3; exon_id "ENSE00001617665.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319988.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15432 chr22 HAVANA CDS 24717256 24717656 . + 2 gene_id "ENSG00000100014.15"; transcript_id "ENST00000440893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SPECC1L-003"; exon_number 3; exon_id "ENSE00001617665.1"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319988.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15433 chr22 HAVANA UTR 24700364 24700420 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000440893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SPECC1L-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319988.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15434 chr22 HAVANA UTR 24709281 24709310 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000440893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SPECC1L-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319988.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15435 chr22 HAVANA transcript 24808128 24810720 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000472799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SPECC1L-005"; level 2; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319990.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15436 chr22 HAVANA exon 24808128 24808675 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000472799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SPECC1L-005"; exon_number 1; exon_id "ENSE00001867567.1"; level 2; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319990.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15437 chr22 HAVANA exon 24810502 24810720 . + . gene_id "ENSG00000100014.15"; transcript_id "ENST00000472799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SPECC1L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SPECC1L-005"; exon_number 2; exon_id "ENSE00001957815.1"; level 2; havana_gene "OTTHUMG00000171450.4"; havana_transcript "OTTHUMT00000319990.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15438 chr22 HAVANA gene 24666866 24838324 . + . gene_id "ENSG00000258555.2"; transcript_id "ENSG00000258555.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SPECC1L-ADORA2A"; level 2; havana_gene "OTTHUMG00000150762.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15439 chr22 HAVANA transcript 24666866 24838324 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15440 chr22 HAVANA exon 24666866 24666951 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 1; exon_id "ENSE00001745229.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15441 chr22 HAVANA exon 24672668 24672771 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 2; exon_id "ENSE00003496656.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15442 chr22 HAVANA exon 24698163 24698352 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 3; exon_id "ENSE00003690458.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15443 chr22 HAVANA CDS 24698200 24698352 . + 0 gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 3; exon_id "ENSE00003690458.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15444 chr22 HAVANA start_codon 24698200 24698202 . + 0 gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 3; exon_id "ENSE00003690458.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15445 chr22 HAVANA exon 24709281 24709434 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 4; exon_id "ENSE00003466523.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15446 chr22 HAVANA CDS 24709281 24709434 . + 0 gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 4; exon_id "ENSE00003466523.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15447 chr22 HAVANA exon 24717256 24718886 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 5; exon_id "ENSE00003686361.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15448 chr22 HAVANA CDS 24717256 24718886 . + 2 gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 5; exon_id "ENSE00003686361.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15449 chr22 HAVANA exon 24720188 24720395 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 6; exon_id "ENSE00003647594.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15450 chr22 HAVANA CDS 24720188 24720395 . + 0 gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 6; exon_id "ENSE00003647594.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15451 chr22 HAVANA exon 24724814 24724887 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 7; exon_id "ENSE00003545130.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15452 chr22 HAVANA CDS 24724814 24724887 . + 2 gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 7; exon_id "ENSE00003545130.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15453 chr22 HAVANA exon 24726224 24726399 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 8; exon_id "ENSE00003638083.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15454 chr22 HAVANA CDS 24726224 24726399 . + 0 gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 8; exon_id "ENSE00003638083.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15455 chr22 HAVANA exon 24730378 24730541 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 9; exon_id "ENSE00003459861.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15456 chr22 HAVANA CDS 24730378 24730541 . + 1 gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 9; exon_id "ENSE00003459861.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15457 chr22 HAVANA exon 24734354 24734445 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 10; exon_id "ENSE00003496690.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15458 chr22 HAVANA CDS 24734354 24734445 . + 2 gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 10; exon_id "ENSE00003496690.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15459 chr22 HAVANA exon 24739450 24739571 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 11; exon_id "ENSE00001804489.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15460 chr22 HAVANA CDS 24739450 24739530 . + 0 gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 11; exon_id "ENSE00001804489.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15461 chr22 HAVANA stop_codon 24739531 24739533 . + 0 gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 11; exon_id "ENSE00001804489.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15462 chr22 HAVANA exon 24743054 24743144 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 12; exon_id "ENSE00003623716.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15463 chr22 HAVANA exon 24759229 24759312 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 13; exon_id "ENSE00003490223.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15464 chr22 HAVANA exon 24761444 24761600 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 14; exon_id "ENSE00003547193.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15465 chr22 HAVANA exon 24765186 24765288 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 15; exon_id "ENSE00003545379.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15466 chr22 HAVANA exon 24807556 24807672 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 16; exon_id "ENSE00003627386.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15467 chr22 HAVANA exon 24808616 24808675 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 17; exon_id "ENSE00003572385.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15468 chr22 HAVANA exon 24810502 24810712 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 18; exon_id "ENSE00001532314.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15469 chr22 HAVANA exon 24829099 24829704 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 19; exon_id "ENSE00003469408.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15470 chr22 HAVANA exon 24836551 24838324 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; exon_number 20; exon_id "ENSE00001747159.1"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15471 chr22 HAVANA UTR 24666866 24666951 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15472 chr22 HAVANA UTR 24672668 24672771 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15473 chr22 HAVANA UTR 24698163 24698199 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15474 chr22 HAVANA UTR 24739531 24739571 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15475 chr22 HAVANA UTR 24743054 24743144 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15476 chr22 HAVANA UTR 24759229 24759312 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15477 chr22 HAVANA UTR 24761444 24761600 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15478 chr22 HAVANA UTR 24765186 24765288 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15479 chr22 HAVANA UTR 24807556 24807672 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15480 chr22 HAVANA UTR 24808616 24808675 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15481 chr22 HAVANA UTR 24810502 24810712 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15482 chr22 HAVANA UTR 24829099 24829704 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15483 chr22 HAVANA UTR 24836551 24838324 . + . gene_id "ENSG00000258555.2"; transcript_id "ENST00000358654.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "SPECC1L-ADORA2A"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SPECC1L-ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "readthrough_transcript"; havana_gene "OTTHUMG00000150762.4"; havana_transcript "OTTHUMT00000413446.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15484 chr22 HAVANA gene 24813847 24838328 . + . gene_id "ENSG00000128271.15"; transcript_id "ENSG00000128271.15"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A"; level 2; havana_gene "OTTHUMG00000150761.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15485 chr22 HAVANA transcript 24813847 24829160 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000467385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADORA2A-013"; level 2; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319980.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15486 chr22 HAVANA exon 24813847 24814227 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000467385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADORA2A-013"; exon_number 1; exon_id "ENSE00001872031.1"; level 2; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319980.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15487 chr22 HAVANA exon 24828589 24828694 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000467385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADORA2A-013"; exon_number 2; exon_id "ENSE00002494363.1"; level 2; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319980.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15488 chr22 HAVANA exon 24829099 24829160 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000467385.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADORA2A-013"; exon_number 3; exon_id "ENSE00001855926.1"; level 2; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319980.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15489 chr22 HAVANA transcript 24818456 24829176 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000486351.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADORA2A-010"; level 2; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319977.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15490 chr22 HAVANA exon 24818456 24818667 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000486351.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADORA2A-010"; exon_number 1; exon_id "ENSE00001860657.1"; level 2; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319977.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15491 chr22 HAVANA exon 24819739 24819925 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000486351.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADORA2A-010"; exon_number 2; exon_id "ENSE00001937260.1"; level 2; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319977.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15492 chr22 HAVANA exon 24827502 24827602 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000486351.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADORA2A-010"; exon_number 3; exon_id "ENSE00001956654.1"; level 2; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319977.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15493 chr22 HAVANA exon 24829099 24829176 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000486351.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADORA2A-010"; exon_number 4; exon_id "ENSE00001943873.1"; level 2; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319977.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15494 chr22 HAVANA transcript 24819565 24829635 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000424232.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-003"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15495 chr22 HAVANA exon 24819565 24819596 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000424232.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-003"; exon_number 1; exon_id "ENSE00001662934.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15496 chr22 HAVANA exon 24829099 24829635 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000424232.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-003"; exon_number 2; exon_id "ENSE00001768654.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15497 chr22 HAVANA CDS 24829373 24829635 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000424232.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-003"; exon_number 2; exon_id "ENSE00001768654.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15498 chr22 HAVANA start_codon 24829373 24829375 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000424232.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-003"; exon_number 2; exon_id "ENSE00001768654.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15499 chr22 HAVANA UTR 24819565 24819596 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000424232.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-003"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15500 chr22 HAVANA UTR 24829099 24829372 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000424232.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-003"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319984.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15501 chr22 HAVANA transcript 24819599 24829697 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000486108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319976.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15502 chr22 HAVANA exon 24819599 24819925 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000486108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-009"; exon_number 1; exon_id "ENSE00001870320.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319976.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15503 chr22 HAVANA exon 24829099 24829697 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000486108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-009"; exon_number 2; exon_id "ENSE00001855323.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319976.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15504 chr22 HAVANA CDS 24829373 24829697 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000486108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-009"; exon_number 2; exon_id "ENSE00001855323.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319976.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15505 chr22 HAVANA start_codon 24829373 24829375 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000486108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-009"; exon_number 2; exon_id "ENSE00001855323.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319976.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15506 chr22 HAVANA UTR 24819599 24819925 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000486108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319976.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15507 chr22 HAVANA UTR 24829099 24829372 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000486108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-009"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319976.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15508 chr22 HAVANA transcript 24820366 24829391 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000464977.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-008"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319975.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15509 chr22 HAVANA exon 24820366 24820524 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000464977.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-008"; exon_number 1; exon_id "ENSE00001830803.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319975.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15510 chr22 HAVANA exon 24828589 24828694 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000464977.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-008"; exon_number 2; exon_id "ENSE00002494363.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319975.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15511 chr22 HAVANA exon 24829099 24829391 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000464977.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-008"; exon_number 3; exon_id "ENSE00001942789.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319975.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15512 chr22 HAVANA CDS 24829373 24829391 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000464977.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-008"; exon_number 3; exon_id "ENSE00001942789.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319975.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15513 chr22 HAVANA start_codon 24829373 24829375 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000464977.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-008"; exon_number 3; exon_id "ENSE00001942789.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319975.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15514 chr22 HAVANA UTR 24820366 24820524 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000464977.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-008"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319975.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15515 chr22 HAVANA UTR 24828589 24828694 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000464977.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-008"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319975.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15516 chr22 HAVANA UTR 24829099 24829372 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000464977.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-008"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319975.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15517 chr22 HAVANA transcript 24820377 24837313 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000444262.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-005"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319972.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15518 chr22 HAVANA exon 24820377 24820524 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000444262.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-005"; exon_number 1; exon_id "ENSE00001637856.2"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319972.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15519 chr22 HAVANA exon 24829099 24829704 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000444262.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-005"; exon_number 2; exon_id "ENSE00003678943.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319972.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15520 chr22 HAVANA CDS 24829373 24829704 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000444262.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-005"; exon_number 2; exon_id "ENSE00003678943.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319972.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15521 chr22 HAVANA start_codon 24829373 24829375 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000444262.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-005"; exon_number 2; exon_id "ENSE00003678943.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319972.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15522 chr22 HAVANA exon 24836551 24837313 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000444262.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-005"; exon_number 3; exon_id "ENSE00001592414.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319972.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15523 chr22 HAVANA CDS 24836551 24837313 . + 1 gene_id "ENSG00000128271.15"; transcript_id "ENST00000444262.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-005"; exon_number 3; exon_id "ENSE00001592414.1"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319972.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15524 chr22 HAVANA UTR 24820377 24820524 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000444262.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-005"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319972.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15525 chr22 HAVANA UTR 24829099 24829372 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000444262.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-005"; level 2; tag "alternative_5_UTR"; tag "not_organism_supported"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319972.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15526 chr22 HAVANA transcript 24823530 24829622 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000496258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-002"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319985.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15527 chr22 HAVANA exon 24823530 24823694 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000496258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-002"; exon_number 1; exon_id "ENSE00001893212.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319985.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15528 chr22 HAVANA exon 24829099 24829622 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000496258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-002"; exon_number 2; exon_id "ENSE00001865691.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319985.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15529 chr22 HAVANA CDS 24829373 24829622 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000496258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-002"; exon_number 2; exon_id "ENSE00001865691.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319985.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15530 chr22 HAVANA start_codon 24829373 24829375 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000496258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-002"; exon_number 2; exon_id "ENSE00001865691.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319985.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15531 chr22 HAVANA UTR 24823530 24823694 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000496258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-002"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319985.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15532 chr22 HAVANA UTR 24829099 24829372 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000496258.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-002"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319985.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15533 chr22 HAVANA transcript 24823530 24838328 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000337539.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13826.1"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319971.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15534 chr22 HAVANA exon 24823530 24823714 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000337539.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-001"; exon_number 1; exon_id "ENSE00002322583.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13826.1"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319971.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15535 chr22 HAVANA exon 24829099 24829704 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000337539.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-001"; exon_number 2; exon_id "ENSE00003678943.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13826.1"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319971.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15536 chr22 HAVANA CDS 24829373 24829704 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000337539.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-001"; exon_number 2; exon_id "ENSE00003678943.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13826.1"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319971.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15537 chr22 HAVANA start_codon 24829373 24829375 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000337539.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-001"; exon_number 2; exon_id "ENSE00003678943.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13826.1"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319971.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15538 chr22 HAVANA exon 24836551 24838328 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000337539.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-001"; exon_number 3; exon_id "ENSE00002241361.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13826.1"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319971.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15539 chr22 HAVANA CDS 24836551 24837454 . + 1 gene_id "ENSG00000128271.15"; transcript_id "ENST00000337539.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-001"; exon_number 3; exon_id "ENSE00002241361.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13826.1"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319971.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15540 chr22 HAVANA stop_codon 24837455 24837457 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000337539.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-001"; exon_number 3; exon_id "ENSE00002241361.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13826.1"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319971.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15541 chr22 HAVANA UTR 24823530 24823714 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000337539.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13826.1"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319971.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15542 chr22 HAVANA UTR 24829099 24829372 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000337539.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13826.1"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319971.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15543 chr22 HAVANA UTR 24837455 24838328 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000337539.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13826.1"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319971.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15544 chr22 HAVANA transcript 24823595 24837141 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000496497.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADORA2A-007"; level 2; tag "basic"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15545 chr22 HAVANA exon 24823595 24823694 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000496497.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADORA2A-007"; exon_number 1; exon_id "ENSE00002514393.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15546 chr22 HAVANA exon 24836551 24837141 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000496497.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADORA2A-007"; exon_number 2; exon_id "ENSE00001813959.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319974.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15547 chr22 HAVANA transcript 24828087 24829460 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000472248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319978.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15548 chr22 HAVANA exon 24828087 24828336 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000472248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-011"; exon_number 1; exon_id "ENSE00002507858.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319978.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15549 chr22 HAVANA exon 24828589 24828694 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000472248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-011"; exon_number 2; exon_id "ENSE00002494363.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319978.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15550 chr22 HAVANA exon 24829099 24829460 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000472248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-011"; exon_number 3; exon_id "ENSE00001811226.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319978.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15551 chr22 HAVANA CDS 24829373 24829460 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000472248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-011"; exon_number 3; exon_id "ENSE00001811226.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319978.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15552 chr22 HAVANA start_codon 24829373 24829375 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000472248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-011"; exon_number 3; exon_id "ENSE00001811226.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319978.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15553 chr22 HAVANA UTR 24828087 24828336 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000472248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319978.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15554 chr22 HAVANA UTR 24828589 24828694 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000472248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319978.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15555 chr22 HAVANA UTR 24829099 24829372 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000472248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319978.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15556 chr22 HAVANA transcript 24828135 24829565 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000436735.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-015"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319982.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15557 chr22 HAVANA exon 24828135 24828336 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000436735.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-015"; exon_number 1; exon_id "ENSE00001686230.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319982.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15558 chr22 HAVANA exon 24829099 24829565 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000436735.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-015"; exon_number 2; exon_id "ENSE00001612631.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319982.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15559 chr22 HAVANA CDS 24829373 24829565 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000436735.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-015"; exon_number 2; exon_id "ENSE00001612631.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319982.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15560 chr22 HAVANA start_codon 24829373 24829375 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000436735.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-015"; exon_number 2; exon_id "ENSE00001612631.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319982.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15561 chr22 HAVANA UTR 24828135 24828336 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000436735.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-015"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319982.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15562 chr22 HAVANA UTR 24829099 24829372 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000436735.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-015"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319982.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15563 chr22 HAVANA transcript 24828808 24829602 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000439591.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-012"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319979.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15564 chr22 HAVANA exon 24828808 24828863 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000439591.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-012"; exon_number 1; exon_id "ENSE00001629121.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319979.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15565 chr22 HAVANA exon 24829099 24829602 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000439591.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-012"; exon_number 2; exon_id "ENSE00001676926.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319979.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15566 chr22 HAVANA CDS 24829373 24829602 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000439591.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-012"; exon_number 2; exon_id "ENSE00001676926.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319979.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15567 chr22 HAVANA start_codon 24829373 24829375 . + 0 gene_id "ENSG00000128271.15"; transcript_id "ENST00000439591.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-012"; exon_number 2; exon_id "ENSE00001676926.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319979.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15568 chr22 HAVANA UTR 24828808 24828863 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000439591.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-012"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319979.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15569 chr22 HAVANA UTR 24829099 24829372 . + . gene_id "ENSG00000128271.15"; transcript_id "ENST00000439591.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADORA2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADORA2A-012"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150761.4"; havana_transcript "OTTHUMT00000319979.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15570 chr22 HAVANA gene 24825178 24891042 . - . gene_id "ENSG00000178803.6"; transcript_id "ENSG00000178803.6"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1"; level 1; havana_gene "OTTHUMG00000150735.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15571 chr22 HAVANA transcript 24825178 24890768 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000326341.4"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000319994.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15572 chr22 HAVANA exon 24890658 24890768 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000326341.4"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-001"; exon_number 1; exon_id "ENSE00001628564.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000319994.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15573 chr22 HAVANA exon 24870951 24871121 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000326341.4"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-001"; exon_number 2; exon_id "ENSE00001725037.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000319994.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15574 chr22 HAVANA exon 24867736 24867863 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000326341.4"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-001"; exon_number 3; exon_id "ENSE00001618254.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000319994.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15575 chr22 HAVANA exon 24837960 24838108 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000326341.4"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-001"; exon_number 4; exon_id "ENSE00001796475.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000319994.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15576 chr22 HAVANA exon 24828230 24828402 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000326341.4"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-001"; exon_number 5; exon_id "ENSE00002037662.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000319994.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15577 chr22 HAVANA exon 24826865 24827530 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000326341.4"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-001"; exon_number 6; exon_id "ENSE00001248991.6"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000319994.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15578 chr22 HAVANA exon 24825178 24826332 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000326341.4"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-001"; exon_number 7; exon_id "ENSE00001425133.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000319994.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15579 chr22 ENSEMBL transcript 24825178 24890783 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000543438.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150735.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15580 chr22 ENSEMBL exon 24890658 24890783 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000543438.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-201"; exon_number 1; exon_id "ENSE00002255936.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150735.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15581 chr22 ENSEMBL exon 24870951 24871121 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000543438.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-201"; exon_number 2; exon_id "ENSE00001725037.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150735.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15582 chr22 ENSEMBL exon 24867736 24867863 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000543438.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-201"; exon_number 3; exon_id "ENSE00001618254.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150735.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15583 chr22 ENSEMBL exon 24837960 24838108 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000543438.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-201"; exon_number 4; exon_id "ENSE00001796475.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150735.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15584 chr22 ENSEMBL exon 24828230 24828402 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000543438.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-201"; exon_number 5; exon_id "ENSE00002037662.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150735.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15585 chr22 ENSEMBL exon 24826877 24827530 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000543438.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-201"; exon_number 6; exon_id "ENSE00002300143.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150735.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15586 chr22 ENSEMBL exon 24825178 24826344 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000543438.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-201"; exon_number 7; exon_id "ENSE00002309813.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150735.4";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15587 chr22 HAVANA transcript 24834244 24891042 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000427813.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000320002.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15588 chr22 HAVANA exon 24890658 24891042 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000427813.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-003"; exon_number 1; exon_id "ENSE00001791946.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000320002.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15589 chr22 HAVANA exon 24870951 24871121 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000427813.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-003"; exon_number 2; exon_id "ENSE00001725037.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000320002.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15590 chr22 HAVANA exon 24867736 24867863 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000427813.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-003"; exon_number 3; exon_id "ENSE00001618254.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000320002.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15591 chr22 HAVANA exon 24856421 24856739 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000427813.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-003"; exon_number 4; exon_id "ENSE00001633191.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000320002.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15592 chr22 HAVANA exon 24848179 24848296 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000427813.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-003"; exon_number 5; exon_id "ENSE00001801183.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000320002.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15593 chr22 HAVANA exon 24837960 24838108 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000427813.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-003"; exon_number 6; exon_id "ENSE00001796475.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000320002.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15594 chr22 HAVANA exon 24835262 24835535 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000427813.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-003"; exon_number 7; exon_id "ENSE00001722520.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000320002.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15595 chr22 HAVANA exon 24834244 24834726 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000427813.2"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-003"; exon_number 8; exon_id "ENSE00001603757.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000320002.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15596 chr22 HAVANA transcript 24856465 24890763 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000412790.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000320003.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15597 chr22 HAVANA exon 24890658 24890763 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000412790.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-002"; exon_number 1; exon_id "ENSE00001632747.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000320003.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15598 chr22 HAVANA exon 24870951 24871121 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000412790.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-002"; exon_number 2; exon_id "ENSE00001725037.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000320003.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15599 chr22 HAVANA exon 24856465 24856739 . - . gene_id "ENSG00000178803.6"; transcript_id "ENST00000412790.1"; gene_type "antisense"; gene_status "KNOWN"; gene_name "ADORA2A-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "ADORA2A-AS1-002"; exon_number 3; exon_id "ENSE00001641835.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150735.4"; havana_transcript "OTTHUMT00000320003.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15600 chr22 HAVANA gene 24863206 24924358 . + . gene_id "ENSG00000100024.10"; transcript_id "ENSG00000100024.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1"; level 2; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15601 chr22 ENSEMBL transcript 24863206 24922636 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15602 chr22 ENSEMBL exon 24863206 24863471 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 1; exon_id "ENSE00002239002.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15603 chr22 ENSEMBL exon 24890077 24891475 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 2; exon_id "ENSE00001830489.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15604 chr22 ENSEMBL CDS 24891404 24891475 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 2; exon_id "ENSE00001830489.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15605 chr22 ENSEMBL start_codon 24891404 24891406 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 2; exon_id "ENSE00001830489.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15606 chr22 ENSEMBL exon 24898094 24898181 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 3; exon_id "ENSE00003571220.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15607 chr22 ENSEMBL CDS 24898094 24898181 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 3; exon_id "ENSE00003571220.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15608 chr22 ENSEMBL exon 24906717 24906811 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 4; exon_id "ENSE00003608623.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15609 chr22 ENSEMBL CDS 24906717 24906811 . + 2 gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 4; exon_id "ENSE00003608623.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15610 chr22 ENSEMBL exon 24909292 24909453 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 5; exon_id "ENSE00003662831.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15611 chr22 ENSEMBL CDS 24909292 24909453 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 5; exon_id "ENSE00003662831.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15612 chr22 ENSEMBL exon 24911169 24911338 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 6; exon_id "ENSE00003646229.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15613 chr22 ENSEMBL CDS 24911169 24911338 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 6; exon_id "ENSE00003646229.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15614 chr22 ENSEMBL exon 24916355 24916436 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 7; exon_id "ENSE00003684201.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15615 chr22 ENSEMBL CDS 24916355 24916436 . + 1 gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 7; exon_id "ENSE00003684201.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15616 chr22 ENSEMBL exon 24917954 24917996 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 8; exon_id "ENSE00003602725.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15617 chr22 ENSEMBL CDS 24917954 24917996 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 8; exon_id "ENSE00003602725.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15618 chr22 ENSEMBL exon 24919587 24919741 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 9; exon_id "ENSE00003611632.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15619 chr22 ENSEMBL CDS 24919587 24919741 . + 2 gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 9; exon_id "ENSE00003611632.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15620 chr22 ENSEMBL exon 24921679 24922636 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 10; exon_id "ENSE00003511367.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15621 chr22 ENSEMBL CDS 24921679 24921759 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 10; exon_id "ENSE00003511367.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15622 chr22 ENSEMBL stop_codon 24921760 24921762 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; exon_number 10; exon_id "ENSE00003511367.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15623 chr22 ENSEMBL UTR 24863206 24863471 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15624 chr22 ENSEMBL UTR 24890077 24891403 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15625 chr22 ENSEMBL UTR 24921760 24922636 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000413389.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000150749.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15626 chr22 HAVANA transcript 24890075 24922636 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15627 chr22 HAVANA exon 24890075 24891475 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; exon_number 1; exon_id "ENSE00001673551.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15628 chr22 HAVANA CDS 24891372 24891475 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; exon_number 1; exon_id "ENSE00001673551.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15629 chr22 HAVANA start_codon 24891372 24891374 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; exon_number 1; exon_id "ENSE00001673551.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15630 chr22 HAVANA exon 24898094 24898181 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; exon_number 2; exon_id "ENSE00003599283.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15631 chr22 HAVANA CDS 24898094 24898115 . + 1 gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; exon_number 2; exon_id "ENSE00003599283.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15632 chr22 HAVANA stop_codon 24898116 24898118 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; exon_number 2; exon_id "ENSE00003599283.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15633 chr22 HAVANA exon 24906717 24906811 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; exon_number 3; exon_id "ENSE00003653579.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15634 chr22 HAVANA exon 24909292 24909453 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; exon_number 4; exon_id "ENSE00003485272.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15635 chr22 HAVANA exon 24911169 24911338 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; exon_number 5; exon_id "ENSE00003646608.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15636 chr22 HAVANA exon 24916355 24916436 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; exon_number 6; exon_id "ENSE00003523350.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15637 chr22 HAVANA exon 24917954 24917996 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; exon_number 7; exon_id "ENSE00003650514.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15638 chr22 HAVANA exon 24919587 24919741 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; exon_number 8; exon_id "ENSE00003589449.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15639 chr22 HAVANA exon 24921679 24922636 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; exon_number 9; exon_id "ENSE00003634077.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15640 chr22 HAVANA UTR 24890075 24891371 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15641 chr22 HAVANA UTR 24898116 24898181 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15642 chr22 HAVANA UTR 24906717 24906811 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15643 chr22 HAVANA UTR 24909292 24909453 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15644 chr22 HAVANA UTR 24911169 24911338 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15645 chr22 HAVANA UTR 24916355 24916436 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15646 chr22 HAVANA UTR 24917954 24917996 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15647 chr22 HAVANA UTR 24919587 24919741 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15648 chr22 HAVANA UTR 24921679 24922636 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000415388.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UPB1-002"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319929.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15649 chr22 HAVANA transcript 24891028 24922553 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15650 chr22 HAVANA exon 24891028 24891475 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 1; exon_id "ENSE00001921738.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15651 chr22 HAVANA CDS 24891372 24891475 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 1; exon_id "ENSE00001921738.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15652 chr22 HAVANA start_codon 24891372 24891374 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 1; exon_id "ENSE00001921738.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15653 chr22 HAVANA exon 24896075 24896246 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 2; exon_id "ENSE00000651713.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15654 chr22 HAVANA CDS 24896075 24896246 . + 1 gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 2; exon_id "ENSE00000651713.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15655 chr22 HAVANA exon 24898094 24898181 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 3; exon_id "ENSE00003571220.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15656 chr22 HAVANA CDS 24898094 24898181 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 3; exon_id "ENSE00003571220.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15657 chr22 HAVANA exon 24906717 24906811 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 4; exon_id "ENSE00003608623.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15658 chr22 HAVANA CDS 24906717 24906811 . + 2 gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 4; exon_id "ENSE00003608623.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15659 chr22 HAVANA exon 24909292 24909453 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 5; exon_id "ENSE00003662831.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15660 chr22 HAVANA CDS 24909292 24909453 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 5; exon_id "ENSE00003662831.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15661 chr22 HAVANA exon 24911169 24911338 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 6; exon_id "ENSE00003646229.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15662 chr22 HAVANA CDS 24911169 24911338 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 6; exon_id "ENSE00003646229.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15663 chr22 HAVANA exon 24916355 24916436 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 7; exon_id "ENSE00003684201.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15664 chr22 HAVANA CDS 24916355 24916436 . + 1 gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 7; exon_id "ENSE00003684201.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15665 chr22 HAVANA exon 24917954 24917996 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 8; exon_id "ENSE00003602725.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15666 chr22 HAVANA CDS 24917954 24917996 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 8; exon_id "ENSE00003602725.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15667 chr22 HAVANA exon 24919587 24919741 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 9; exon_id "ENSE00003611632.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15668 chr22 HAVANA CDS 24919587 24919741 . + 2 gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 9; exon_id "ENSE00003611632.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15669 chr22 HAVANA exon 24921679 24922553 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 10; exon_id "ENSE00001904746.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15670 chr22 HAVANA CDS 24921679 24921759 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 10; exon_id "ENSE00001904746.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15671 chr22 HAVANA stop_codon 24921760 24921762 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; exon_number 10; exon_id "ENSE00001904746.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15672 chr22 HAVANA UTR 24891028 24891371 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15673 chr22 HAVANA UTR 24921760 24922553 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000326010.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UPB1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13827.1"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319869.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15674 chr22 HAVANA transcript 24891210 24899706 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000382760.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UPB1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319930.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15675 chr22 HAVANA exon 24891210 24891475 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000382760.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UPB1-003"; exon_number 1; exon_id "ENSE00001817665.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319930.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15676 chr22 HAVANA CDS 24891372 24891475 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000382760.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UPB1-003"; exon_number 1; exon_id "ENSE00001817665.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319930.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15677 chr22 HAVANA start_codon 24891372 24891374 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000382760.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UPB1-003"; exon_number 1; exon_id "ENSE00001817665.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319930.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15678 chr22 HAVANA exon 24896075 24896246 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000382760.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UPB1-003"; exon_number 2; exon_id "ENSE00000651713.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319930.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15679 chr22 HAVANA CDS 24896075 24896246 . + 1 gene_id "ENSG00000100024.10"; transcript_id "ENST00000382760.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UPB1-003"; exon_number 2; exon_id "ENSE00000651713.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319930.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15680 chr22 HAVANA exon 24898094 24898181 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000382760.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UPB1-003"; exon_number 3; exon_id "ENSE00003571220.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319930.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15681 chr22 HAVANA CDS 24898094 24898181 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000382760.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UPB1-003"; exon_number 3; exon_id "ENSE00003571220.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319930.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15682 chr22 HAVANA exon 24898305 24899706 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000382760.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UPB1-003"; exon_number 4; exon_id "ENSE00001493267.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319930.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15683 chr22 HAVANA CDS 24898305 24898498 . + 2 gene_id "ENSG00000100024.10"; transcript_id "ENST00000382760.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UPB1-003"; exon_number 4; exon_id "ENSE00001493267.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319930.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15684 chr22 HAVANA stop_codon 24898499 24898501 . + 0 gene_id "ENSG00000100024.10"; transcript_id "ENST00000382760.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UPB1-003"; exon_number 4; exon_id "ENSE00001493267.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319930.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15685 chr22 HAVANA UTR 24891210 24891371 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000382760.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UPB1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319930.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15686 chr22 HAVANA UTR 24898499 24899706 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000382760.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UPB1-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319930.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15687 chr22 HAVANA transcript 24915769 24924358 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000498140.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "UPB1-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319931.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15688 chr22 HAVANA exon 24915769 24915898 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000498140.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "UPB1-004"; exon_number 1; exon_id "ENSE00001829684.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319931.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15689 chr22 HAVANA exon 24916355 24916436 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000498140.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "UPB1-004"; exon_number 2; exon_id "ENSE00003523350.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319931.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15690 chr22 HAVANA exon 24919587 24919741 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000498140.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "UPB1-004"; exon_number 3; exon_id "ENSE00003589449.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319931.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15691 chr22 HAVANA exon 24921679 24924358 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000498140.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "UPB1-004"; exon_number 4; exon_id "ENSE00001857718.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000319931.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15692 chr22 HAVANA transcript 24916142 24919668 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000486043.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UPB1-006"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000320118.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15693 chr22 HAVANA exon 24916142 24916436 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000486043.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UPB1-006"; exon_number 1; exon_id "ENSE00001926324.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000320118.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15694 chr22 HAVANA exon 24917954 24917996 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000486043.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UPB1-006"; exon_number 2; exon_id "ENSE00003650514.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000320118.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15695 chr22 HAVANA exon 24919587 24919668 . + . gene_id "ENSG00000100024.10"; transcript_id "ENST00000486043.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UPB1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UPB1-006"; exon_number 3; exon_id "ENSE00001835018.1"; level 2; havana_gene "OTTHUMG00000150749.2"; havana_transcript "OTTHUMT00000320118.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15696 chr22 HAVANA gene 24912476 24914354 . + . gene_id "ENSG00000228923.1"; transcript_id "ENSG00000228923.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000355.2"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "AP000355.2"; level 2; havana_gene "OTTHUMG00000150750.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15697 chr22 HAVANA transcript 24912476 24914354 . + . gene_id "ENSG00000228923.1"; transcript_id "ENST00000432032.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000355.2"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AP000355.2-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150750.1"; havana_transcript "OTTHUMT00000319934.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15698 chr22 HAVANA exon 24912476 24912720 . + . gene_id "ENSG00000228923.1"; transcript_id "ENST00000432032.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000355.2"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AP000355.2-001"; exon_number 1; exon_id "ENSE00001639625.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150750.1"; havana_transcript "OTTHUMT00000319934.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15699 chr22 HAVANA exon 24914120 24914354 . + . gene_id "ENSG00000228923.1"; transcript_id "ENST00000432032.1"; gene_type "antisense"; gene_status "NOVEL"; gene_name "AP000355.2"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "AP000355.2-001"; exon_number 2; exon_id "ENSE00001634773.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150750.1"; havana_transcript "OTTHUMT00000319934.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
15700 chr22 HAVANA gene 24936406 24951903 . - . gene_id "ENSG00000138867.12"; transcript_id "ENSG00000138867.12"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1"; level 1; havana_gene "OTTHUMG00000150728.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15701 chr22 HAVANA transcript 24936406 24951150 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15702 chr22 HAVANA exon 24950917 24951150 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; exon_number 1; exon_id "ENSE00001553643.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15703 chr22 HAVANA CDS 24950917 24950959 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; exon_number 1; exon_id "ENSE00001553643.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15704 chr22 HAVANA start_codon 24950957 24950959 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; exon_number 1; exon_id "ENSE00001553643.3"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
15705 chr22 HAVANA exon 24944885 24944969 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; exon_number 2; exon_id "ENSE00003545500.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15706 chr22 HAVANA CDS 24944885 24944969 . - 2 gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; exon_number 2; exon_id "ENSE00003545500.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15707 chr22 HAVANA exon 24943876 24944041 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; exon_number 3; exon_id "ENSE00000935754.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15708 chr22 HAVANA CDS 24943876 24944041 . - 1 gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; exon_number 3; exon_id "ENSE00000935754.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15709 chr22 HAVANA exon 24942882 24942973 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; exon_number 4; exon_id "ENSE00000935755.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15710 chr22 HAVANA CDS 24942882 24942973 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; exon_number 4; exon_id "ENSE00000935755.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15711 chr22 HAVANA exon 24939810 24940051 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; exon_number 5; exon_id "ENSE00003684891.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15712 chr22 HAVANA CDS 24939810 24940051 . - 1 gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; exon_number 5; exon_id "ENSE00003684891.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15713 chr22 HAVANA exon 24936406 24939068 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; exon_number 6; exon_id "ENSE00001887490.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15714 chr22 HAVANA CDS 24938977 24939068 . - 2 gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; exon_number 6; exon_id "ENSE00001887490.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15715 chr22 HAVANA stop_codon 24938974 24938976 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; exon_number 6; exon_id "ENSE00001887490.1"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15716 chr22 HAVANA UTR 24950960 24951150 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15717 chr22 HAVANA UTR 24936406 24938976 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407471.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-001"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33621.1"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319819.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15718 chr22 HAVANA transcript 24936406 24951284 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15719 chr22 HAVANA exon 24950917 24951284 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; exon_number 1; exon_id "ENSE00001667374.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15720 chr22 HAVANA CDS 24950917 24950959 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; exon_number 1; exon_id "ENSE00001667374.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15721 chr22 HAVANA start_codon 24950957 24950959 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; exon_number 1; exon_id "ENSE00001667374.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15722 chr22 HAVANA exon 24944885 24944969 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; exon_number 2; exon_id "ENSE00003545500.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15723 chr22 HAVANA CDS 24944885 24944969 . - 2 gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; exon_number 2; exon_id "ENSE00003545500.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15724 chr22 HAVANA exon 24943876 24944041 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; exon_number 3; exon_id "ENSE00000935754.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15725 chr22 HAVANA CDS 24943876 24944041 . - 1 gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; exon_number 3; exon_id "ENSE00000935754.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15726 chr22 HAVANA exon 24942882 24942973 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; exon_number 4; exon_id "ENSE00000935755.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15727 chr22 HAVANA CDS 24942882 24942973 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; exon_number 4; exon_id "ENSE00000935755.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15728 chr22 HAVANA exon 24939810 24940051 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; exon_number 5; exon_id "ENSE00003684891.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15729 chr22 HAVANA CDS 24939810 24940051 . - 1 gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; exon_number 5; exon_id "ENSE00003684891.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15730 chr22 HAVANA exon 24936406 24939065 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; exon_number 6; exon_id "ENSE00001789037.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15731 chr22 HAVANA CDS 24938977 24939065 . - 2 gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; exon_number 6; exon_id "ENSE00001789037.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15732 chr22 HAVANA stop_codon 24938974 24938976 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; exon_number 6; exon_id "ENSE00001789037.1"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15733 chr22 HAVANA UTR 24950960 24951284 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15734 chr22 HAVANA UTR 24936406 24938976 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000435822.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-002"; level 2; tag "basic"; tag "appris_candidate"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319820.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15735 chr22 HAVANA transcript 24936410 24951139 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15736 chr22 HAVANA exon 24950917 24951139 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 1; exon_id "ENSE00001831631.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15737 chr22 HAVANA CDS 24950917 24950959 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 1; exon_id "ENSE00001831631.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15738 chr22 HAVANA start_codon 24950957 24950959 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 1; exon_id "ENSE00001831631.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15739 chr22 HAVANA exon 24944885 24944969 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 2; exon_id "ENSE00003545500.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15740 chr22 HAVANA CDS 24944885 24944969 . - 2 gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 2; exon_id "ENSE00003545500.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15741 chr22 HAVANA exon 24943876 24944041 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 3; exon_id "ENSE00000935754.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15742 chr22 HAVANA CDS 24943876 24944041 . - 1 gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 3; exon_id "ENSE00000935754.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15743 chr22 HAVANA exon 24942882 24942973 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 4; exon_id "ENSE00000935755.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15744 chr22 HAVANA CDS 24942882 24942973 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 4; exon_id "ENSE00000935755.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15745 chr22 HAVANA exon 24939810 24940051 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 5; exon_id "ENSE00003684891.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15746 chr22 HAVANA CDS 24939810 24940051 . - 1 gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 5; exon_id "ENSE00003684891.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15747 chr22 HAVANA exon 24938902 24939065 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 6; exon_id "ENSE00001563679.2"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15748 chr22 HAVANA CDS 24938977 24939065 . - 2 gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 6; exon_id "ENSE00001563679.2"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15749 chr22 HAVANA stop_codon 24938974 24938976 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 6; exon_id "ENSE00001563679.2"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15750 chr22 HAVANA exon 24936410 24937030 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; exon_number 7; exon_id "ENSE00001894173.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15751 chr22 HAVANA UTR 24950960 24951139 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15752 chr22 HAVANA UTR 24938902 24938976 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15753 chr22 HAVANA UTR 24936410 24937030 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000398245.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GUCD1-004"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319822.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15754 chr22 HAVANA transcript 24936500 24944000 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000490922.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUCD1-010"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319828.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15755 chr22 HAVANA exon 24943876 24944000 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000490922.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUCD1-010"; exon_number 1; exon_id "ENSE00001864718.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319828.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15756 chr22 HAVANA exon 24936500 24936941 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000490922.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUCD1-010"; exon_number 2; exon_id "ENSE00001827046.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319828.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15757 chr22 HAVANA transcript 24938366 24951903 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15758 chr22 HAVANA exon 24951583 24951903 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; exon_number 1; exon_id "ENSE00001700171.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15759 chr22 HAVANA CDS 24951583 24951793 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; exon_number 1; exon_id "ENSE00001700171.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15760 chr22 HAVANA start_codon 24951791 24951793 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; exon_number 1; exon_id "ENSE00001700171.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15761 chr22 HAVANA exon 24944885 24944969 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; exon_number 2; exon_id "ENSE00003545500.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15762 chr22 HAVANA CDS 24944885 24944969 . - 2 gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; exon_number 2; exon_id "ENSE00003545500.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15763 chr22 HAVANA exon 24943876 24944041 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; exon_number 3; exon_id "ENSE00000935754.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15764 chr22 HAVANA CDS 24943876 24944041 . - 1 gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; exon_number 3; exon_id "ENSE00000935754.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15765 chr22 HAVANA exon 24942882 24942973 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; exon_number 4; exon_id "ENSE00000935755.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15766 chr22 HAVANA CDS 24942882 24942973 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; exon_number 4; exon_id "ENSE00000935755.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15767 chr22 HAVANA exon 24939810 24940051 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; exon_number 5; exon_id "ENSE00003684891.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15768 chr22 HAVANA CDS 24939810 24940051 . - 1 gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; exon_number 5; exon_id "ENSE00003684891.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15769 chr22 HAVANA exon 24938366 24939065 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; exon_number 6; exon_id "ENSE00001944671.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15770 chr22 HAVANA CDS 24938977 24939065 . - 2 gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; exon_number 6; exon_id "ENSE00001944671.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15771 chr22 HAVANA stop_codon 24938974 24938976 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; exon_number 6; exon_id "ENSE00001944671.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15772 chr22 HAVANA UTR 24951794 24951903 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15773 chr22 HAVANA UTR 24938366 24938976 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000404664.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GUCD1-003"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319821.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15774 chr22 HAVANA transcript 24938655 24951057 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15775 chr22 HAVANA exon 24950917 24951057 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; exon_number 1; exon_id "ENSE00001820638.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15776 chr22 HAVANA CDS 24950917 24950959 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; exon_number 1; exon_id "ENSE00001820638.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15777 chr22 HAVANA start_codon 24950957 24950959 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; exon_number 1; exon_id "ENSE00001820638.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15778 chr22 HAVANA exon 24944885 24944969 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; exon_number 2; exon_id "ENSE00003545500.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15779 chr22 HAVANA CDS 24944885 24944969 . - 2 gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; exon_number 2; exon_id "ENSE00003545500.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15780 chr22 HAVANA exon 24943876 24944041 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; exon_number 3; exon_id "ENSE00000935754.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15781 chr22 HAVANA CDS 24943876 24944041 . - 1 gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; exon_number 3; exon_id "ENSE00000935754.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15782 chr22 HAVANA exon 24942882 24942973 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; exon_number 4; exon_id "ENSE00000935755.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15783 chr22 HAVANA CDS 24942882 24942973 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; exon_number 4; exon_id "ENSE00000935755.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15784 chr22 HAVANA exon 24938655 24939065 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; exon_number 5; exon_id "ENSE00001879045.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15785 chr22 HAVANA CDS 24939044 24939065 . - 1 gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; exon_number 5; exon_id "ENSE00001879045.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15786 chr22 HAVANA stop_codon 24939041 24939043 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; exon_number 5; exon_id "ENSE00001879045.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15787 chr22 HAVANA UTR 24950960 24951057 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15788 chr22 HAVANA UTR 24938655 24939043 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000447813.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-009"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319827.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15789 chr22 HAVANA transcript 24938724 24951093 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15790 chr22 HAVANA exon 24950917 24951093 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; exon_number 1; exon_id "ENSE00001550204.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15791 chr22 HAVANA CDS 24950917 24950959 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; exon_number 1; exon_id "ENSE00001550204.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15792 chr22 HAVANA start_codon 24950957 24950959 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; exon_number 1; exon_id "ENSE00001550204.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15793 chr22 HAVANA exon 24944885 24944969 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; exon_number 2; exon_id "ENSE00003545500.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15794 chr22 HAVANA CDS 24944885 24944969 . - 2 gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; exon_number 2; exon_id "ENSE00003545500.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15795 chr22 HAVANA exon 24943876 24944041 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; exon_number 3; exon_id "ENSE00000935754.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15796 chr22 HAVANA CDS 24943876 24944041 . - 1 gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; exon_number 3; exon_id "ENSE00000935754.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15797 chr22 HAVANA exon 24942882 24942973 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; exon_number 4; exon_id "ENSE00000935755.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15798 chr22 HAVANA CDS 24942882 24942973 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; exon_number 4; exon_id "ENSE00000935755.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15799 chr22 HAVANA exon 24938724 24939068 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; exon_number 5; exon_id "ENSE00001554558.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15800 chr22 HAVANA CDS 24939044 24939068 . - 1 gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; exon_number 5; exon_id "ENSE00001554558.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15801 chr22 HAVANA stop_codon 24939041 24939043 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; exon_number 5; exon_id "ENSE00001554558.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15802 chr22 HAVANA UTR 24950960 24951093 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15803 chr22 HAVANA UTR 24938724 24939043 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000402766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GUCD1-008"; level 2; tag "basic"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319826.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15804 chr22 HAVANA transcript 24938798 24940051 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000493099.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUCD1-012"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319830.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15805 chr22 HAVANA exon 24939810 24940051 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000493099.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUCD1-012"; exon_number 1; exon_id "ENSE00003501783.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319830.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15806 chr22 HAVANA exon 24938798 24939065 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000493099.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUCD1-012"; exon_number 2; exon_id "ENSE00001875097.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319830.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15807 chr22 HAVANA transcript 24940013 24943358 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000480272.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GUCD1-007"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15808 chr22 HAVANA exon 24942882 24943358 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000480272.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GUCD1-007"; exon_number 1; exon_id "ENSE00001949965.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15809 chr22 HAVANA exon 24940013 24940051 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000480272.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GUCD1-007"; exon_number 2; exon_id "ENSE00001849308.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319825.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15810 chr22 HAVANA transcript 24942885 24951827 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407973.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15811 chr22 HAVANA exon 24951583 24951827 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407973.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-005"; exon_number 1; exon_id "ENSE00001551011.2"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15812 chr22 HAVANA exon 24950917 24951104 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407973.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-005"; exon_number 2; exon_id "ENSE00001564390.2"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15813 chr22 HAVANA CDS 24950917 24950959 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000407973.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-005"; exon_number 2; exon_id "ENSE00001564390.2"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15814 chr22 HAVANA start_codon 24950957 24950959 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000407973.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-005"; exon_number 2; exon_id "ENSE00001564390.2"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15815 chr22 HAVANA exon 24944885 24944969 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407973.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-005"; exon_number 3; exon_id "ENSE00003545500.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15816 chr22 HAVANA CDS 24944885 24944969 . - 2 gene_id "ENSG00000138867.12"; transcript_id "ENST00000407973.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-005"; exon_number 3; exon_id "ENSE00003545500.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15817 chr22 HAVANA exon 24943876 24944041 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407973.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-005"; exon_number 4; exon_id "ENSE00000935754.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15818 chr22 HAVANA CDS 24943876 24944041 . - 1 gene_id "ENSG00000138867.12"; transcript_id "ENST00000407973.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-005"; exon_number 4; exon_id "ENSE00000935754.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15819 chr22 HAVANA exon 24942885 24942973 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407973.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-005"; exon_number 5; exon_id "ENSE00001768200.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15820 chr22 HAVANA CDS 24942885 24942973 . - 0 gene_id "ENSG00000138867.12"; transcript_id "ENST00000407973.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-005"; exon_number 5; exon_id "ENSE00001768200.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15821 chr22 HAVANA UTR 24951583 24951827 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407973.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15822 chr22 HAVANA UTR 24950960 24951104 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000407973.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GUCD1-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319823.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15823 chr22 HAVANA transcript 24943684 24951092 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000468170.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GUCD1-006"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15824 chr22 HAVANA exon 24950917 24951092 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000468170.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GUCD1-006"; exon_number 1; exon_id "ENSE00001889850.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15825 chr22 HAVANA exon 24944885 24944969 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000468170.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GUCD1-006"; exon_number 2; exon_id "ENSE00003491233.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15826 chr22 HAVANA exon 24943684 24944041 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000468170.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GUCD1-006"; exon_number 3; exon_id "ENSE00001860470.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319824.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15827 chr22 HAVANA transcript 24943741 24944929 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000490810.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUCD1-011"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319829.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15828 chr22 HAVANA exon 24944885 24944929 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000490810.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUCD1-011"; exon_number 1; exon_id "ENSE00001856518.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319829.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15829 chr22 HAVANA exon 24943741 24944041 . - . gene_id "ENSG00000138867.12"; transcript_id "ENST00000490810.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GUCD1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GUCD1-011"; exon_number 2; exon_id "ENSE00001902594.1"; level 2; havana_gene "OTTHUMG00000150728.2"; havana_transcript "OTTHUMT00000319829.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15830 chr22 HAVANA gene 24951471 25005947 . + . gene_id "ENSG00000100028.7"; transcript_id "ENSG00000100028.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3"; level 2; havana_gene "OTTHUMG00000150727.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
15831 chr22 HAVANA transcript 24951471 24968740 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000215829.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15832 chr22 HAVANA exon 24951471 24952039 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000215829.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-001"; exon_number 1; exon_id "ENSE00001948969.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15833 chr22 HAVANA exon 24953625 24953768 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000215829.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-001"; exon_number 2; exon_id "ENSE00002662131.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
15834 chr22 HAVANA CDS 24953643 24953768 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000215829.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-001"; exon_number 2; exon_id "ENSE00002662131.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
15835 chr22 HAVANA start_codon 24953643 24953645 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000215829.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-001"; exon_number 2; exon_id "ENSE00002662131.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15836 chr22 HAVANA exon 24963952 24964144 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000215829.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-001"; exon_number 3; exon_id "ENSE00002681577.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15837 chr22 HAVANA CDS 24963952 24964144 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000215829.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-001"; exon_number 3; exon_id "ENSE00002681577.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15838 chr22 HAVANA exon 24967884 24968740 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000215829.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-001"; exon_number 4; exon_id "ENSE00001402429.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
15839 chr22 HAVANA CDS 24967884 24967942 . + 2 gene_id "ENSG00000100028.7"; transcript_id "ENST00000215829.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-001"; exon_number 4; exon_id "ENSE00001402429.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
15840 chr22 HAVANA stop_codon 24967943 24967945 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000215829.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-001"; exon_number 4; exon_id "ENSE00001402429.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15841 chr22 HAVANA UTR 24951471 24952039 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000215829.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15842 chr22 HAVANA UTR 24953625 24953642 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000215829.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15843 chr22 HAVANA UTR 24967943 24968740 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000215829.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319813.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15844 chr22 HAVANA transcript 24951926 24954054 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000468770.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SNRPD3-002"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319814.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
15845 chr22 HAVANA exon 24951926 24952039 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000468770.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SNRPD3-002"; exon_number 1; exon_id "ENSE00001880045.1"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319814.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15846 chr22 HAVANA exon 24953625 24954054 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000468770.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SNRPD3-002"; exon_number 2; exon_id "ENSE00001906066.1"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319814.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
15847 chr22 HAVANA transcript 24951975 24978020 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15848 chr22 HAVANA exon 24951975 24952039 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; exon_number 1; exon_id "ENSE00001548613.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
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parents:
diff changeset
15849 chr22 HAVANA exon 24953625 24953768 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; exon_number 2; exon_id "ENSE00002662131.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15850 chr22 HAVANA CDS 24953643 24953768 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; exon_number 2; exon_id "ENSE00002662131.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15851 chr22 HAVANA start_codon 24953643 24953645 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; exon_number 2; exon_id "ENSE00002662131.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15852 chr22 HAVANA exon 24963952 24964144 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; exon_number 3; exon_id "ENSE00002681577.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15853 chr22 HAVANA CDS 24963952 24964144 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; exon_number 3; exon_id "ENSE00002681577.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15854 chr22 HAVANA exon 24967986 24968029 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; exon_number 4; exon_id "ENSE00003639551.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15855 chr22 HAVANA CDS 24967986 24968026 . + 2 gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; exon_number 4; exon_id "ENSE00003639551.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15856 chr22 HAVANA stop_codon 24968027 24968029 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; exon_number 4; exon_id "ENSE00003639551.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15857 chr22 HAVANA exon 24977900 24978020 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; exon_number 5; exon_id "ENSE00001553198.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15858 chr22 HAVANA UTR 24951975 24952039 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15859 chr22 HAVANA UTR 24953625 24953642 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15860 chr22 HAVANA UTR 24968027 24968029 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15861 chr22 HAVANA UTR 24977900 24978020 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000402849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SNRPD3-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319815.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15862 chr22 HAVANA transcript 24951977 25005947 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15863 chr22 HAVANA exon 24951977 24952039 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; exon_number 1; exon_id "ENSE00001564162.1"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15864 chr22 HAVANA exon 24953625 24953768 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; exon_number 2; exon_id "ENSE00002662131.1"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15865 chr22 HAVANA CDS 24953643 24953768 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; exon_number 2; exon_id "ENSE00002662131.1"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15866 chr22 HAVANA start_codon 24953643 24953645 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; exon_number 2; exon_id "ENSE00002662131.1"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15867 chr22 HAVANA exon 24963952 24964144 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; exon_number 3; exon_id "ENSE00002681577.1"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15868 chr22 HAVANA CDS 24963952 24964144 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; exon_number 3; exon_id "ENSE00002681577.1"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15869 chr22 HAVANA exon 24967884 24967985 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; exon_number 4; exon_id "ENSE00001547898.1"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15870 chr22 HAVANA CDS 24967884 24967942 . + 2 gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; exon_number 4; exon_id "ENSE00001547898.1"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15871 chr22 HAVANA stop_codon 24967943 24967945 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; exon_number 4; exon_id "ENSE00001547898.1"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15872 chr22 HAVANA exon 24979650 24979776 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; exon_number 5; exon_id "ENSE00001624027.1"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15873 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; exon_number 6; exon_id "ENSE00003689748.1"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15874 chr22 HAVANA exon 25005932 25005947 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; exon_number 7; exon_id "ENSE00001723617.1"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15875 chr22 HAVANA UTR 24951977 24952039 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15876 chr22 HAVANA UTR 24953625 24953642 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15877 chr22 HAVANA UTR 24967943 24967985 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15878 chr22 HAVANA UTR 24979650 24979776 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15879 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15880 chr22 HAVANA UTR 25005932 25005947 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000404603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-005"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13828.1"; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319817.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15881 chr22 HAVANA transcript 24952000 25005117 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15882 chr22 HAVANA exon 24952000 24952039 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; exon_number 1; exon_id "ENSE00001672986.1"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15883 chr22 HAVANA exon 24953625 24953768 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; exon_number 2; exon_id "ENSE00002662131.1"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15884 chr22 HAVANA CDS 24953643 24953768 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; exon_number 2; exon_id "ENSE00002662131.1"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15885 chr22 HAVANA start_codon 24953643 24953645 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; exon_number 2; exon_id "ENSE00002662131.1"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15886 chr22 HAVANA exon 24963952 24964005 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; exon_number 3; exon_id "ENSE00001609783.1"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15887 chr22 HAVANA CDS 24963952 24964005 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; exon_number 3; exon_id "ENSE00001609783.1"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15888 chr22 HAVANA exon 24967986 24968029 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; exon_number 4; exon_id "ENSE00003634460.1"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15889 chr22 HAVANA CDS 24967986 24967991 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; exon_number 4; exon_id "ENSE00003634460.1"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15890 chr22 HAVANA stop_codon 24967992 24967994 . + 0 gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; exon_number 4; exon_id "ENSE00003634460.1"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15891 chr22 HAVANA exon 24979650 24979776 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; exon_number 5; exon_id "ENSE00001624027.1"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15892 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; exon_number 6; exon_id "ENSE00003689748.1"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15893 chr22 HAVANA exon 25004957 25005117 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; exon_number 7; exon_id "ENSE00001724289.1"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15894 chr22 HAVANA UTR 24952000 24952039 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15895 chr22 HAVANA UTR 24953625 24953642 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15896 chr22 HAVANA UTR 24967992 24968029 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15897 chr22 HAVANA UTR 24979650 24979776 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15898 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15899 chr22 HAVANA UTR 25004957 25005117 . + . gene_id "ENSG00000100028.7"; transcript_id "ENST00000439775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SNRPD3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SNRPD3-004"; level 2; havana_gene "OTTHUMG00000150727.1"; havana_transcript "OTTHUMT00000319816.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15900 chr22 HAVANA gene 24979718 25024972 . + . gene_id "ENSG00000100031.14"; transcript_id "ENSG00000100031.14"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1"; level 2; havana_gene "OTTHUMG00000030859.31";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15901 chr22 HAVANA transcript 24979718 25024935 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15902 chr22 HAVANA exon 24979718 24979776 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 1; exon_id "ENSE00001210129.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15903 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15904 chr22 HAVANA exon 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 3; exon_id "ENSE00001695757.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15905 chr22 HAVANA exon 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 4; exon_id "ENSE00001652397.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15906 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15907 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15908 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15909 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15910 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15911 chr22 HAVANA exon 25011008 25011094 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 7; exon_id "ENSE00003576528.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15912 chr22 HAVANA CDS 25011008 25011094 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 7; exon_id "ENSE00003576528.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15913 chr22 HAVANA exon 25016295 25016487 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 8; exon_id "ENSE00001608818.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15914 chr22 HAVANA CDS 25016295 25016487 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 8; exon_id "ENSE00001608818.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15915 chr22 HAVANA exon 25016880 25017037 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 9; exon_id "ENSE00001769597.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15916 chr22 HAVANA CDS 25016880 25017037 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 9; exon_id "ENSE00001769597.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15917 chr22 HAVANA exon 25019074 25019223 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 10; exon_id "ENSE00003587293.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15918 chr22 HAVANA CDS 25019074 25019223 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 10; exon_id "ENSE00003587293.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15919 chr22 HAVANA exon 25019747 25019883 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 11; exon_id "ENSE00003672097.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15920 chr22 HAVANA CDS 25019747 25019883 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 11; exon_id "ENSE00003672097.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15921 chr22 HAVANA exon 25023399 25023586 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 12; exon_id "ENSE00003530565.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15922 chr22 HAVANA CDS 25023399 25023586 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 12; exon_id "ENSE00003530565.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15923 chr22 HAVANA exon 25023819 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 13; exon_id "ENSE00003588312.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15924 chr22 HAVANA CDS 25023819 25023946 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 13; exon_id "ENSE00003588312.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15925 chr22 HAVANA exon 25024048 25024160 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 14; exon_id "ENSE00003566790.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15926 chr22 HAVANA CDS 25024048 25024160 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 14; exon_id "ENSE00003566790.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15927 chr22 HAVANA exon 25024242 25024355 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 15; exon_id "ENSE00003521775.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15928 chr22 HAVANA CDS 25024242 25024355 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 15; exon_id "ENSE00003521775.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15929 chr22 HAVANA exon 25024660 25024935 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 16; exon_id "ENSE00001828148.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15930 chr22 HAVANA CDS 25024660 25024803 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 16; exon_id "ENSE00001828148.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15931 chr22 HAVANA stop_codon 25024804 25024806 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; exon_number 16; exon_id "ENSE00001828148.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15932 chr22 HAVANA UTR 24979718 24979776 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15933 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15934 chr22 HAVANA UTR 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15935 chr22 HAVANA UTR 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15936 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15937 chr22 HAVANA UTR 25024804 25024935 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000248923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-005"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319110.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15938 chr22 HAVANA transcript 24990778 25007138 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000456869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-010"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15939 chr22 HAVANA exon 24990778 24990853 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000456869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-010"; exon_number 1; exon_id "ENSE00001753508.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15940 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000456869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-010"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15941 chr22 HAVANA exon 25005929 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000456869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-010"; exon_number 3; exon_id "ENSE00001675954.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15942 chr22 HAVANA exon 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000456869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-010"; exon_number 4; exon_id "ENSE00001652397.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15943 chr22 HAVANA exon 25007042 25007138 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000456869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-010"; exon_number 5; exon_id "ENSE00001752638.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15944 chr22 HAVANA CDS 25007049 25007138 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000456869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-010"; exon_number 5; exon_id "ENSE00001752638.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15945 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000456869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-010"; exon_number 5; exon_id "ENSE00001752638.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15946 chr22 HAVANA UTR 24990778 24990853 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000456869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-010"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15947 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000456869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-010"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15948 chr22 HAVANA UTR 25005929 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000456869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-010"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15949 chr22 HAVANA UTR 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000456869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-010"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15950 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000456869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-010"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319196.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15951 chr22 HAVANA transcript 24990781 25011074 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15952 chr22 HAVANA exon 24990781 24990853 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; exon_number 1; exon_id "ENSE00001625541.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15953 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15954 chr22 HAVANA exon 25005929 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; exon_number 3; exon_id "ENSE00001675954.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15955 chr22 HAVANA exon 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; exon_number 4; exon_id "ENSE00002670141.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15956 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15957 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15958 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15959 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15960 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15961 chr22 HAVANA exon 25011008 25011074 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; exon_number 7; exon_id "ENSE00001685946.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15962 chr22 HAVANA CDS 25011008 25011074 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; exon_number 7; exon_id "ENSE00001685946.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15963 chr22 HAVANA UTR 24990781 24990853 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15964 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15965 chr22 HAVANA UTR 25005929 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15966 chr22 HAVANA UTR 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15967 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000411974.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319197.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15968 chr22 HAVANA transcript 24999114 25024101 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15969 chr22 HAVANA exon 24999114 24999494 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 1; exon_id "ENSE00001651569.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15970 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15971 chr22 HAVANA exon 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 3; exon_id "ENSE00001695757.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15972 chr22 HAVANA exon 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 4; exon_id "ENSE00002670141.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15973 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15974 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15975 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15976 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15977 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15978 chr22 HAVANA exon 25011008 25011094 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 7; exon_id "ENSE00003576528.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15979 chr22 HAVANA CDS 25011008 25011094 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 7; exon_id "ENSE00003576528.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15980 chr22 HAVANA exon 25016295 25016487 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 8; exon_id "ENSE00001608818.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15981 chr22 HAVANA CDS 25016295 25016487 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 8; exon_id "ENSE00001608818.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15982 chr22 HAVANA exon 25016880 25017037 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 9; exon_id "ENSE00001769597.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15983 chr22 HAVANA CDS 25016880 25017037 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 9; exon_id "ENSE00001769597.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15984 chr22 HAVANA exon 25019074 25019223 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 10; exon_id "ENSE00003587293.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15985 chr22 HAVANA CDS 25019074 25019223 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 10; exon_id "ENSE00003587293.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15986 chr22 HAVANA exon 25019747 25019883 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 11; exon_id "ENSE00003672097.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15987 chr22 HAVANA CDS 25019747 25019883 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 11; exon_id "ENSE00003672097.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15988 chr22 HAVANA exon 25023399 25023586 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 12; exon_id "ENSE00003530565.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15989 chr22 HAVANA CDS 25023399 25023586 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 12; exon_id "ENSE00003530565.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15990 chr22 HAVANA exon 25023819 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 13; exon_id "ENSE00003588312.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15991 chr22 HAVANA CDS 25023819 25023946 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 13; exon_id "ENSE00003588312.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15992 chr22 HAVANA exon 25024048 25024101 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 14; exon_id "ENSE00001699067.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15993 chr22 HAVANA CDS 25024048 25024101 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; exon_number 14; exon_id "ENSE00001699067.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15994 chr22 HAVANA UTR 24999114 24999494 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15995 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15996 chr22 HAVANA UTR 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15997 chr22 HAVANA UTR 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15998 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-003"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319108.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
15999 chr22 HAVANA transcript 24999151 25010781 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000445029.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-012"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16000 chr22 HAVANA exon 24999151 24999302 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000445029.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-012"; exon_number 1; exon_id "ENSE00001627488.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16001 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000445029.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-012"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16002 chr22 HAVANA exon 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000445029.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-012"; exon_number 3; exon_id "ENSE00002670141.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16003 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000445029.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-012"; exon_number 4; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16004 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000445029.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-012"; exon_number 4; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16005 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000445029.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-012"; exon_number 4; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16006 chr22 HAVANA exon 25010743 25010781 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000445029.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-012"; exon_number 5; exon_id "ENSE00001711241.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16007 chr22 HAVANA CDS 25010743 25010781 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000445029.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-012"; exon_number 5; exon_id "ENSE00001711241.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16008 chr22 HAVANA UTR 24999151 24999302 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000445029.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-012"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16009 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000445029.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-012"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16010 chr22 HAVANA UTR 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000445029.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-012"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16011 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000445029.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-012"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319198.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16012 chr22 HAVANA transcript 24999165 25016435 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16013 chr22 HAVANA exon 24999165 24999288 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; exon_number 1; exon_id "ENSE00001783802.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16014 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16015 chr22 HAVANA exon 25005929 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; exon_number 3; exon_id "ENSE00001675954.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16016 chr22 HAVANA exon 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; exon_number 4; exon_id "ENSE00001652397.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16017 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16018 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16019 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16020 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16021 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16022 chr22 HAVANA exon 25011008 25011094 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; exon_number 7; exon_id "ENSE00003576528.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16023 chr22 HAVANA CDS 25011008 25011094 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; exon_number 7; exon_id "ENSE00003576528.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16024 chr22 HAVANA exon 25016295 25016435 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; exon_number 8; exon_id "ENSE00001655105.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16025 chr22 HAVANA CDS 25016295 25016435 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; exon_number 8; exon_id "ENSE00001655105.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16026 chr22 HAVANA UTR 24999165 24999288 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16027 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16028 chr22 HAVANA UTR 25005929 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16029 chr22 HAVANA UTR 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16030 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000419133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-013"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319199.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16031 chr22 HAVANA transcript 24999168 25024969 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16032 chr22 HAVANA exon 24999168 24999494 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 1; exon_id "ENSE00001542664.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16033 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16034 chr22 HAVANA exon 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 3; exon_id "ENSE00001695757.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16035 chr22 HAVANA exon 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 4; exon_id "ENSE00001652397.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16036 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16037 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16038 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16039 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16040 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16041 chr22 HAVANA exon 25011008 25011094 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 7; exon_id "ENSE00003576528.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16042 chr22 HAVANA CDS 25011008 25011094 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 7; exon_id "ENSE00003576528.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16043 chr22 HAVANA exon 25016295 25016487 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 8; exon_id "ENSE00001608818.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16044 chr22 HAVANA CDS 25016295 25016487 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 8; exon_id "ENSE00001608818.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16045 chr22 HAVANA exon 25016880 25017037 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 9; exon_id "ENSE00001769597.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16046 chr22 HAVANA CDS 25016880 25017037 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 9; exon_id "ENSE00001769597.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16047 chr22 HAVANA exon 25019074 25019223 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 10; exon_id "ENSE00003587293.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16048 chr22 HAVANA CDS 25019074 25019223 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 10; exon_id "ENSE00003587293.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16049 chr22 HAVANA exon 25019747 25019883 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 11; exon_id "ENSE00003672097.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16050 chr22 HAVANA CDS 25019747 25019883 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 11; exon_id "ENSE00003672097.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16051 chr22 HAVANA exon 25023399 25023586 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 12; exon_id "ENSE00003530565.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16052 chr22 HAVANA CDS 25023399 25023586 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 12; exon_id "ENSE00003530565.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16053 chr22 HAVANA exon 25023819 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 13; exon_id "ENSE00003588312.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16054 chr22 HAVANA CDS 25023819 25023946 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 13; exon_id "ENSE00003588312.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16055 chr22 HAVANA exon 25024048 25024160 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 14; exon_id "ENSE00003566790.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16056 chr22 HAVANA CDS 25024048 25024160 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 14; exon_id "ENSE00003566790.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16057 chr22 HAVANA exon 25024242 25024355 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 15; exon_id "ENSE00003521775.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16058 chr22 HAVANA CDS 25024242 25024355 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 15; exon_id "ENSE00003521775.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16059 chr22 HAVANA exon 25024660 25024969 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 16; exon_id "ENSE00001770001.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16060 chr22 HAVANA CDS 25024660 25024803 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 16; exon_id "ENSE00001770001.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16061 chr22 HAVANA stop_codon 25024804 25024806 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; exon_number 16; exon_id "ENSE00001770001.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16062 chr22 HAVANA UTR 24999168 24999494 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16063 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16064 chr22 HAVANA UTR 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16065 chr22 HAVANA UTR 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16066 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16067 chr22 HAVANA UTR 25024804 25024969 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400382.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-002"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16068 chr22 HAVANA transcript 24999180 25007159 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000438643.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-019"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16069 chr22 HAVANA exon 24999180 24999288 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000438643.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-019"; exon_number 1; exon_id "ENSE00001542666.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16070 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000438643.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-019"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16071 chr22 HAVANA exon 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000438643.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-019"; exon_number 3; exon_id "ENSE00001695757.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16072 chr22 HAVANA exon 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000438643.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-019"; exon_number 4; exon_id "ENSE00002670141.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16073 chr22 HAVANA exon 25007045 25007159 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000438643.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-019"; exon_number 5; exon_id "ENSE00001665828.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16074 chr22 HAVANA CDS 25007049 25007159 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000438643.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-019"; exon_number 5; exon_id "ENSE00001665828.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16075 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000438643.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-019"; exon_number 5; exon_id "ENSE00001665828.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16076 chr22 HAVANA UTR 24999180 24999288 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000438643.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-019"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16077 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000438643.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-019"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16078 chr22 HAVANA UTR 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000438643.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-019"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16079 chr22 HAVANA UTR 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000438643.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-019"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16080 chr22 HAVANA UTR 25007045 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000438643.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-019"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319244.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16081 chr22 HAVANA transcript 24999180 25011094 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16082 chr22 HAVANA exon 24999180 24999288 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; exon_number 1; exon_id "ENSE00001542666.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16083 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16084 chr22 HAVANA exon 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; exon_number 3; exon_id "ENSE00001695757.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16085 chr22 HAVANA exon 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; exon_number 4; exon_id "ENSE00002670141.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16086 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16087 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16088 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16089 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16090 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16091 chr22 HAVANA exon 25011008 25011094 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; exon_number 7; exon_id "ENSE00003615169.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16092 chr22 HAVANA CDS 25011008 25011094 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; exon_number 7; exon_id "ENSE00003615169.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16093 chr22 HAVANA UTR 24999180 24999288 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16094 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16095 chr22 HAVANA UTR 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16096 chr22 HAVANA UTR 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16097 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000452551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-004"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319109.27";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16098 chr22 HAVANA transcript 24999180 25024972 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16099 chr22 HAVANA exon 24999180 24999288 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 1; exon_id "ENSE00001542666.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16100 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16101 chr22 HAVANA exon 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 3; exon_id "ENSE00001695757.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16102 chr22 HAVANA exon 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 4; exon_id "ENSE00001652397.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16103 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16104 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16105 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16106 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16107 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16108 chr22 HAVANA exon 25011008 25011094 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 7; exon_id "ENSE00003576528.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16109 chr22 HAVANA CDS 25011008 25011094 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 7; exon_id "ENSE00003576528.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16110 chr22 HAVANA exon 25016295 25016487 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 8; exon_id "ENSE00001608818.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16111 chr22 HAVANA CDS 25016295 25016487 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 8; exon_id "ENSE00001608818.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16112 chr22 HAVANA exon 25016880 25017037 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 9; exon_id "ENSE00001769597.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16113 chr22 HAVANA CDS 25016880 25017037 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 9; exon_id "ENSE00001769597.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16114 chr22 HAVANA exon 25019074 25019223 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 10; exon_id "ENSE00003587293.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16115 chr22 HAVANA CDS 25019074 25019223 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 10; exon_id "ENSE00003587293.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16116 chr22 HAVANA exon 25019747 25019883 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 11; exon_id "ENSE00003672097.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16117 chr22 HAVANA CDS 25019747 25019883 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 11; exon_id "ENSE00003672097.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16118 chr22 HAVANA exon 25023399 25023586 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 12; exon_id "ENSE00003530565.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16119 chr22 HAVANA CDS 25023399 25023586 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 12; exon_id "ENSE00003530565.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16120 chr22 HAVANA exon 25023819 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 13; exon_id "ENSE00003588312.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16121 chr22 HAVANA CDS 25023819 25023946 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 13; exon_id "ENSE00003588312.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16122 chr22 HAVANA exon 25024048 25024160 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 14; exon_id "ENSE00003566790.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16123 chr22 HAVANA CDS 25024048 25024160 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 14; exon_id "ENSE00003566790.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16124 chr22 HAVANA exon 25024242 25024355 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 15; exon_id "ENSE00003521775.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16125 chr22 HAVANA CDS 25024242 25024355 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 15; exon_id "ENSE00003521775.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16126 chr22 HAVANA exon 25024660 25024972 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 16; exon_id "ENSE00001804438.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16127 chr22 HAVANA CDS 25024660 25024803 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 16; exon_id "ENSE00001804438.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16128 chr22 HAVANA stop_codon 25024804 25024806 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; exon_number 16; exon_id "ENSE00001804438.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16129 chr22 HAVANA UTR 24999180 24999288 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16130 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16131 chr22 HAVANA UTR 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16132 chr22 HAVANA UTR 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16133 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16134 chr22 HAVANA UTR 25024804 25024972 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400383.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16135 chr22 HAVANA transcript 24999182 25010818 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16136 chr22 HAVANA exon 24999182 24999494 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; exon_number 1; exon_id "ENSE00001602759.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16137 chr22 HAVANA exon 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; exon_number 2; exon_id "ENSE00001695757.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16138 chr22 HAVANA exon 25006217 25006303 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; exon_number 3; exon_id "ENSE00001679124.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16139 chr22 HAVANA exon 25006381 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; exon_number 4; exon_id "ENSE00001684322.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16140 chr22 HAVANA exon 25007045 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; exon_number 5; exon_id "ENSE00001602344.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16141 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; exon_number 5; exon_id "ENSE00001602344.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16142 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; exon_number 5; exon_id "ENSE00001602344.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16143 chr22 HAVANA exon 25010743 25010818 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; exon_number 6; exon_id "ENSE00001695941.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16144 chr22 HAVANA CDS 25010743 25010818 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; exon_number 6; exon_id "ENSE00001695941.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16145 chr22 HAVANA UTR 24999182 24999494 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16146 chr22 HAVANA UTR 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16147 chr22 HAVANA UTR 25006217 25006303 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16148 chr22 HAVANA UTR 25006381 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16149 chr22 HAVANA UTR 25007045 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000412898.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-014"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319200.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16150 chr22 HAVANA transcript 24999183 25024968 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16151 chr22 HAVANA exon 24999183 24999288 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 1; exon_id "ENSE00001542661.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16152 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16153 chr22 HAVANA exon 25004957 25005198 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 3; exon_id "ENSE00001723918.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16154 chr22 HAVANA exon 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 4; exon_id "ENSE00001695757.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16155 chr22 HAVANA exon 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 5; exon_id "ENSE00002670141.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16156 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 6; exon_id "ENSE00003647825.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16157 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 6; exon_id "ENSE00003647825.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16158 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 6; exon_id "ENSE00003647825.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16159 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 7; exon_id "ENSE00001737518.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16160 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 7; exon_id "ENSE00001737518.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16161 chr22 HAVANA exon 25011008 25011094 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 8; exon_id "ENSE00003576528.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16162 chr22 HAVANA CDS 25011008 25011094 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 8; exon_id "ENSE00003576528.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16163 chr22 HAVANA exon 25016295 25016487 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 9; exon_id "ENSE00001608818.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16164 chr22 HAVANA CDS 25016295 25016487 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 9; exon_id "ENSE00001608818.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16165 chr22 HAVANA exon 25016880 25017037 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 10; exon_id "ENSE00001769597.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16166 chr22 HAVANA CDS 25016880 25017037 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 10; exon_id "ENSE00001769597.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16167 chr22 HAVANA exon 25019074 25019223 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 11; exon_id "ENSE00003587293.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16168 chr22 HAVANA CDS 25019074 25019223 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 11; exon_id "ENSE00003587293.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16169 chr22 HAVANA exon 25019747 25019883 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 12; exon_id "ENSE00003672097.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16170 chr22 HAVANA CDS 25019747 25019883 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 12; exon_id "ENSE00003672097.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16171 chr22 HAVANA exon 25023399 25023586 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 13; exon_id "ENSE00003530565.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16172 chr22 HAVANA CDS 25023399 25023586 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 13; exon_id "ENSE00003530565.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16173 chr22 HAVANA exon 25023819 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 14; exon_id "ENSE00003588312.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16174 chr22 HAVANA CDS 25023819 25023946 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 14; exon_id "ENSE00003588312.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16175 chr22 HAVANA exon 25024048 25024160 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 15; exon_id "ENSE00003566790.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16176 chr22 HAVANA CDS 25024048 25024160 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 15; exon_id "ENSE00003566790.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16177 chr22 HAVANA exon 25024242 25024355 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 16; exon_id "ENSE00003521775.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16178 chr22 HAVANA CDS 25024242 25024355 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 16; exon_id "ENSE00003521775.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16179 chr22 HAVANA exon 25024660 25024968 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 17; exon_id "ENSE00001595544.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16180 chr22 HAVANA CDS 25024660 25024803 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 17; exon_id "ENSE00001595544.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16181 chr22 HAVANA stop_codon 25024804 25024806 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; exon_number 17; exon_id "ENSE00001595544.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16182 chr22 HAVANA UTR 24999183 24999288 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16183 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16184 chr22 HAVANA UTR 25004957 25005198 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16185 chr22 HAVANA UTR 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16186 chr22 HAVANA UTR 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16187 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16188 chr22 HAVANA UTR 25024804 25024968 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000400380.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000075747.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16189 chr22 HAVANA transcript 24999184 25010871 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000455483.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-015"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16190 chr22 HAVANA exon 24999184 24999288 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000455483.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-015"; exon_number 1; exon_id "ENSE00001753611.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16191 chr22 HAVANA exon 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000455483.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-015"; exon_number 2; exon_id "ENSE00002670141.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16192 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000455483.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-015"; exon_number 3; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16193 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000455483.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-015"; exon_number 3; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16194 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000455483.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-015"; exon_number 3; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16195 chr22 HAVANA exon 25010743 25010871 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000455483.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-015"; exon_number 4; exon_id "ENSE00001605071.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16196 chr22 HAVANA CDS 25010743 25010871 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000455483.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-015"; exon_number 4; exon_id "ENSE00001605071.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16197 chr22 HAVANA UTR 24999184 24999288 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000455483.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-015"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16198 chr22 HAVANA UTR 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000455483.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-015"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16199 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000455483.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-015"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319201.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16200 chr22 HAVANA transcript 24999202 25011038 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16201 chr22 HAVANA exon 24999202 24999494 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; exon_number 1; exon_id "ENSE00001627694.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16202 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16203 chr22 HAVANA exon 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; exon_number 3; exon_id "ENSE00001695757.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16204 chr22 HAVANA exon 25006217 25006303 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; exon_number 4; exon_id "ENSE00001679124.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16205 chr22 HAVANA exon 25006422 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; exon_number 5; exon_id "ENSE00001615106.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16206 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; exon_number 6; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16207 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; exon_number 6; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16208 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; exon_number 6; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16209 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; exon_number 7; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16210 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; exon_number 7; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16211 chr22 HAVANA exon 25011008 25011038 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; exon_number 8; exon_id "ENSE00001592402.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16212 chr22 HAVANA CDS 25011008 25011038 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; exon_number 8; exon_id "ENSE00001592402.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16213 chr22 HAVANA UTR 24999202 24999494 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16214 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16215 chr22 HAVANA UTR 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16216 chr22 HAVANA UTR 25006217 25006303 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16217 chr22 HAVANA UTR 25006422 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16218 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000430289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-023"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319323.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16219 chr22 HAVANA transcript 25003588 25011092 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16220 chr22 HAVANA exon 25003588 25003699 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; exon_number 1; exon_id "ENSE00001751222.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16221 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16222 chr22 HAVANA exon 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; exon_number 3; exon_id "ENSE00002670141.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16223 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; exon_number 4; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16224 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; exon_number 4; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16225 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; exon_number 4; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16226 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; exon_number 5; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16227 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; exon_number 5; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16228 chr22 HAVANA exon 25011008 25011092 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; exon_number 6; exon_id "ENSE00001710435.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16229 chr22 HAVANA CDS 25011008 25011092 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; exon_number 6; exon_id "ENSE00001710435.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16230 chr22 HAVANA UTR 25003588 25003699 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16231 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16232 chr22 HAVANA UTR 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16233 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000447416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-016"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319202.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16234 chr22 HAVANA transcript 25003606 25011045 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16235 chr22 HAVANA exon 25003606 25003699 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; exon_number 1; exon_id "ENSE00001763912.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16236 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16237 chr22 HAVANA exon 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; exon_number 3; exon_id "ENSE00001695757.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16238 chr22 HAVANA exon 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; exon_number 4; exon_id "ENSE00002670141.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16239 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16240 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16241 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16242 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16243 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16244 chr22 HAVANA exon 25011008 25011045 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; exon_number 7; exon_id "ENSE00001610844.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16245 chr22 HAVANA CDS 25011008 25011045 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; exon_number 7; exon_id "ENSE00001610844.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16246 chr22 HAVANA UTR 25003606 25003699 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16247 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16248 chr22 HAVANA UTR 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16249 chr22 HAVANA UTR 25006325 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16250 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000432867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-017"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319203.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16251 chr22 HAVANA transcript 25003626 25011060 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16252 chr22 HAVANA exon 25003626 25003699 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; exon_number 1; exon_id "ENSE00001712719.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16253 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16254 chr22 HAVANA exon 25005929 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; exon_number 3; exon_id "ENSE00001675954.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16255 chr22 HAVANA exon 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; exon_number 4; exon_id "ENSE00001652397.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16256 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16257 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16258 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; exon_number 5; exon_id "ENSE00003647825.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16259 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16260 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16261 chr22 HAVANA exon 25011008 25011060 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; exon_number 7; exon_id "ENSE00001721751.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16262 chr22 HAVANA CDS 25011008 25011060 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; exon_number 7; exon_id "ENSE00001721751.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16263 chr22 HAVANA UTR 25003626 25003699 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16264 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16265 chr22 HAVANA UTR 25005929 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16266 chr22 HAVANA UTR 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16267 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000451366.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-018"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319243.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16268 chr22 HAVANA transcript 25003626 25024972 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16269 chr22 HAVANA exon 25003626 25003699 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 1; exon_id "ENSE00001712719.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16270 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16271 chr22 HAVANA exon 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 3; exon_id "ENSE00001695757.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16272 chr22 HAVANA exon 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 4; exon_id "ENSE00001652397.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16273 chr22 HAVANA exon 25007045 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 5; exon_id "ENSE00001602344.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16274 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 5; exon_id "ENSE00001602344.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16275 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 5; exon_id "ENSE00001602344.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16276 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16277 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16278 chr22 HAVANA exon 25011008 25011094 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 7; exon_id "ENSE00003576528.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16279 chr22 HAVANA CDS 25011008 25011094 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 7; exon_id "ENSE00003576528.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16280 chr22 HAVANA exon 25016295 25016487 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 8; exon_id "ENSE00001608818.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16281 chr22 HAVANA CDS 25016295 25016487 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 8; exon_id "ENSE00001608818.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16282 chr22 HAVANA exon 25016880 25017037 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 9; exon_id "ENSE00001769597.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16283 chr22 HAVANA CDS 25016880 25017037 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 9; exon_id "ENSE00001769597.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16284 chr22 HAVANA exon 25019074 25019223 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 10; exon_id "ENSE00003587293.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16285 chr22 HAVANA CDS 25019074 25019223 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 10; exon_id "ENSE00003587293.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16286 chr22 HAVANA exon 25019747 25019883 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 11; exon_id "ENSE00003672097.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16287 chr22 HAVANA CDS 25019747 25019883 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 11; exon_id "ENSE00003672097.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16288 chr22 HAVANA exon 25023399 25023586 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 12; exon_id "ENSE00003530565.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16289 chr22 HAVANA CDS 25023399 25023586 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 12; exon_id "ENSE00003530565.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16290 chr22 HAVANA exon 25023819 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 13; exon_id "ENSE00003588312.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16291 chr22 HAVANA CDS 25023819 25023946 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 13; exon_id "ENSE00003588312.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16292 chr22 HAVANA exon 25024048 25024160 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 14; exon_id "ENSE00003566790.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16293 chr22 HAVANA CDS 25024048 25024160 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 14; exon_id "ENSE00003566790.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16294 chr22 HAVANA exon 25024242 25024355 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 15; exon_id "ENSE00003521775.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16295 chr22 HAVANA CDS 25024242 25024355 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 15; exon_id "ENSE00003521775.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16296 chr22 HAVANA exon 25024660 25024972 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 16; exon_id "ENSE00001804438.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16297 chr22 HAVANA CDS 25024660 25024803 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 16; exon_id "ENSE00001804438.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16298 chr22 HAVANA stop_codon 25024804 25024806 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; exon_number 16; exon_id "ENSE00001804438.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16299 chr22 HAVANA UTR 25003626 25003699 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16300 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16301 chr22 HAVANA UTR 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16302 chr22 HAVANA UTR 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16303 chr22 HAVANA UTR 25007045 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16304 chr22 HAVANA UTR 25024804 25024972 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000406383.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-202"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42992.1"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000250797.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16305 chr22 HAVANA transcript 25003631 25011092 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16306 chr22 HAVANA exon 25003631 25003699 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; exon_number 1; exon_id "ENSE00001791271.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16307 chr22 HAVANA exon 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; exon_number 2; exon_id "ENSE00003562911.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16308 chr22 HAVANA exon 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; exon_number 3; exon_id "ENSE00001695757.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16309 chr22 HAVANA exon 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; exon_number 4; exon_id "ENSE00001652397.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16310 chr22 HAVANA exon 25007045 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; exon_number 5; exon_id "ENSE00001602344.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16311 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; exon_number 5; exon_id "ENSE00001602344.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16312 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; exon_number 5; exon_id "ENSE00001602344.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16313 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16314 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; exon_number 6; exon_id "ENSE00001737518.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16315 chr22 HAVANA exon 25011008 25011092 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; exon_number 7; exon_id "ENSE00001710435.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16316 chr22 HAVANA CDS 25011008 25011092 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; exon_number 7; exon_id "ENSE00001710435.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16317 chr22 HAVANA UTR 25003631 25003699 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16318 chr22 HAVANA UTR 25003921 25003990 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16319 chr22 HAVANA UTR 25005932 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16320 chr22 HAVANA UTR 25006217 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16321 chr22 HAVANA UTR 25007045 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000428855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-020"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319245.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16322 chr22 HAVANA transcript 25005429 25024963 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16323 chr22 HAVANA exon 25005429 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 1; exon_id "ENSE00001766334.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16324 chr22 HAVANA exon 25006217 25006303 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 2; exon_id "ENSE00001679124.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16325 chr22 HAVANA exon 25006422 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 3; exon_id "ENSE00001615106.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16326 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 4; exon_id "ENSE00003647825.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16327 chr22 HAVANA CDS 25007049 25007212 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 4; exon_id "ENSE00003647825.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16328 chr22 HAVANA start_codon 25007049 25007051 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 4; exon_id "ENSE00003647825.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16329 chr22 HAVANA exon 25010743 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 5; exon_id "ENSE00001737518.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16330 chr22 HAVANA CDS 25010743 25010873 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 5; exon_id "ENSE00001737518.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16331 chr22 HAVANA exon 25011008 25011094 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 6; exon_id "ENSE00003576528.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16332 chr22 HAVANA CDS 25011008 25011094 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 6; exon_id "ENSE00003576528.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16333 chr22 HAVANA exon 25016295 25016487 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 7; exon_id "ENSE00001608818.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16334 chr22 HAVANA CDS 25016295 25016487 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 7; exon_id "ENSE00001608818.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16335 chr22 HAVANA exon 25016880 25017037 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 8; exon_id "ENSE00001769597.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16336 chr22 HAVANA CDS 25016880 25017037 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 8; exon_id "ENSE00001769597.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16337 chr22 HAVANA exon 25019074 25019223 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 9; exon_id "ENSE00003587293.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16338 chr22 HAVANA CDS 25019074 25019223 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 9; exon_id "ENSE00003587293.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16339 chr22 HAVANA exon 25019747 25019883 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 10; exon_id "ENSE00003672097.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16340 chr22 HAVANA CDS 25019747 25019883 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 10; exon_id "ENSE00003672097.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16341 chr22 HAVANA exon 25023377 25023586 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 11; exon_id "ENSE00003692447.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16342 chr22 HAVANA CDS 25023377 25023454 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 11; exon_id "ENSE00003692447.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16343 chr22 HAVANA stop_codon 25023455 25023457 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 11; exon_id "ENSE00003692447.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16344 chr22 HAVANA exon 25023819 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 12; exon_id "ENSE00003632874.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16345 chr22 HAVANA exon 25024048 25024160 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 13; exon_id "ENSE00003527870.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16346 chr22 HAVANA exon 25024242 25024355 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 14; exon_id "ENSE00003561552.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16347 chr22 HAVANA exon 25024660 25024963 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; exon_number 15; exon_id "ENSE00003524333.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16348 chr22 HAVANA UTR 25005429 25006000 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16349 chr22 HAVANA UTR 25006217 25006303 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16350 chr22 HAVANA UTR 25006422 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16351 chr22 HAVANA UTR 25007042 25007048 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16352 chr22 HAVANA UTR 25023455 25023586 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16353 chr22 HAVANA UTR 25023819 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16354 chr22 HAVANA UTR 25024048 25024160 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16355 chr22 HAVANA UTR 25024242 25024355 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16356 chr22 HAVANA UTR 25024660 25024963 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000425895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GGT1-006"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319111.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16357 chr22 HAVANA transcript 25006333 25011939 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000474191.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GGT1-022"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16358 chr22 HAVANA exon 25006333 25006498 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000474191.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GGT1-022"; exon_number 1; exon_id "ENSE00001920315.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16359 chr22 HAVANA exon 25007042 25007212 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000474191.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GGT1-022"; exon_number 2; exon_id "ENSE00003557823.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16360 chr22 HAVANA exon 25011008 25011094 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000474191.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GGT1-022"; exon_number 3; exon_id "ENSE00003693658.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16361 chr22 HAVANA exon 25011829 25011939 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000474191.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GGT1-022"; exon_number 4; exon_id "ENSE00001885634.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319247.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16362 chr22 HAVANA transcript 25010829 25016800 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000487766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GGT1-021"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16363 chr22 HAVANA exon 25010829 25010873 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000487766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GGT1-021"; exon_number 1; exon_id "ENSE00001883341.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16364 chr22 HAVANA exon 25011008 25011094 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000487766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GGT1-021"; exon_number 2; exon_id "ENSE00003693658.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16365 chr22 HAVANA exon 25016295 25016800 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000487766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GGT1-021"; exon_number 3; exon_id "ENSE00001865822.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319246.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16366 chr22 HAVANA transcript 25016375 25024943 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000466310.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT1-009"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319116.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16367 chr22 HAVANA exon 25016375 25016487 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000466310.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT1-009"; exon_number 1; exon_id "ENSE00001840082.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319116.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16368 chr22 HAVANA exon 25019074 25019223 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000466310.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT1-009"; exon_number 2; exon_id "ENSE00003629513.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319116.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16369 chr22 HAVANA exon 25019747 25019883 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000466310.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT1-009"; exon_number 3; exon_id "ENSE00003609946.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319116.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16370 chr22 HAVANA exon 25023377 25023586 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000466310.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT1-009"; exon_number 4; exon_id "ENSE00003538497.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319116.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16371 chr22 HAVANA exon 25023819 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000466310.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT1-009"; exon_number 5; exon_id "ENSE00003632874.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319116.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16372 chr22 HAVANA exon 25024048 25024160 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000466310.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT1-009"; exon_number 6; exon_id "ENSE00003527870.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319116.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16373 chr22 HAVANA exon 25024242 25024355 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000466310.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT1-009"; exon_number 7; exon_id "ENSE00003561552.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319116.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16374 chr22 HAVANA exon 25024660 25024943 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000466310.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GGT1-009"; exon_number 8; exon_id "ENSE00001760127.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319116.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16375 chr22 HAVANA transcript 25023147 25024963 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16376 chr22 HAVANA exon 25023147 25023245 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; exon_number 1; exon_id "ENSE00001714115.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16377 chr22 HAVANA exon 25023377 25023586 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; exon_number 2; exon_id "ENSE00003527833.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16378 chr22 HAVANA CDS 25023411 25023586 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; exon_number 2; exon_id "ENSE00003527833.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16379 chr22 HAVANA start_codon 25023411 25023413 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; exon_number 2; exon_id "ENSE00003527833.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16380 chr22 HAVANA exon 25023819 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; exon_number 3; exon_id "ENSE00003588312.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16381 chr22 HAVANA CDS 25023819 25023946 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; exon_number 3; exon_id "ENSE00003588312.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16382 chr22 HAVANA exon 25024048 25024160 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; exon_number 4; exon_id "ENSE00003566790.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16383 chr22 HAVANA CDS 25024048 25024160 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; exon_number 4; exon_id "ENSE00003566790.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16384 chr22 HAVANA exon 25024242 25024355 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; exon_number 5; exon_id "ENSE00003521775.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16385 chr22 HAVANA CDS 25024242 25024355 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; exon_number 5; exon_id "ENSE00003521775.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16386 chr22 HAVANA exon 25024660 25024963 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; exon_number 6; exon_id "ENSE00003480697.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16387 chr22 HAVANA CDS 25024660 25024803 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; exon_number 6; exon_id "ENSE00003480697.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16388 chr22 HAVANA stop_codon 25024804 25024806 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; exon_number 6; exon_id "ENSE00003480697.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16389 chr22 HAVANA UTR 25023147 25023245 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16390 chr22 HAVANA UTR 25023377 25023410 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16391 chr22 HAVANA UTR 25024804 25024963 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000401885.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-025"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319129.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16392 chr22 HAVANA transcript 25023219 25024942 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16393 chr22 HAVANA exon 25023219 25023245 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; exon_number 1; exon_id "ENSE00001649791.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16394 chr22 HAVANA exon 25023399 25023586 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; exon_number 2; exon_id "ENSE00003468197.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16395 chr22 HAVANA CDS 25023411 25023586 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; exon_number 2; exon_id "ENSE00003468197.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16396 chr22 HAVANA start_codon 25023411 25023413 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; exon_number 2; exon_id "ENSE00003468197.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16397 chr22 HAVANA exon 25023819 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; exon_number 3; exon_id "ENSE00003588312.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16398 chr22 HAVANA CDS 25023819 25023946 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; exon_number 3; exon_id "ENSE00003588312.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16399 chr22 HAVANA exon 25024048 25024160 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; exon_number 4; exon_id "ENSE00003566790.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16400 chr22 HAVANA CDS 25024048 25024160 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; exon_number 4; exon_id "ENSE00003566790.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16401 chr22 HAVANA exon 25024242 25024355 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; exon_number 5; exon_id "ENSE00003521775.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16402 chr22 HAVANA CDS 25024242 25024355 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; exon_number 5; exon_id "ENSE00003521775.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16403 chr22 HAVANA exon 25024660 25024942 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; exon_number 6; exon_id "ENSE00001798007.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16404 chr22 HAVANA CDS 25024660 25024803 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; exon_number 6; exon_id "ENSE00001798007.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16405 chr22 HAVANA stop_codon 25024804 25024806 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; exon_number 6; exon_id "ENSE00001798007.1"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16406 chr22 HAVANA UTR 25023219 25023245 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16407 chr22 HAVANA UTR 25023399 25023410 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16408 chr22 HAVANA UTR 25024804 25024942 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-026"; level 2; tag "alternative_5_UTR"; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319128.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16409 chr22 HAVANA transcript 25023222 25024972 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16410 chr22 HAVANA exon 25023222 25023586 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; exon_number 1; exon_id "ENSE00001664503.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16411 chr22 HAVANA CDS 25023411 25023586 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; exon_number 1; exon_id "ENSE00001664503.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16412 chr22 HAVANA start_codon 25023411 25023413 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; exon_number 1; exon_id "ENSE00001664503.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16413 chr22 HAVANA exon 25023819 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; exon_number 2; exon_id "ENSE00003588312.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16414 chr22 HAVANA CDS 25023819 25023946 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; exon_number 2; exon_id "ENSE00003588312.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16415 chr22 HAVANA exon 25024048 25024160 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; exon_number 3; exon_id "ENSE00003566790.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16416 chr22 HAVANA CDS 25024048 25024160 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; exon_number 3; exon_id "ENSE00003566790.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16417 chr22 HAVANA exon 25024242 25024355 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; exon_number 4; exon_id "ENSE00003521775.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16418 chr22 HAVANA CDS 25024242 25024355 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; exon_number 4; exon_id "ENSE00003521775.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16419 chr22 HAVANA exon 25024660 25024972 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; exon_number 5; exon_id "ENSE00001804438.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16420 chr22 HAVANA CDS 25024660 25024803 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; exon_number 5; exon_id "ENSE00001804438.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16421 chr22 HAVANA stop_codon 25024804 25024806 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; exon_number 5; exon_id "ENSE00001804438.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16422 chr22 HAVANA UTR 25023222 25023410 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16423 chr22 HAVANA UTR 25024804 25024972 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000403838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GGT1-024"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319113.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16424 chr22 HAVANA transcript 25023375 25024963 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-028"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319130.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16425 chr22 HAVANA exon 25023375 25023586 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-028"; exon_number 1; exon_id "ENSE00001555913.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319130.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16426 chr22 HAVANA CDS 25023411 25023586 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-028"; exon_number 1; exon_id "ENSE00001555913.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319130.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16427 chr22 HAVANA start_codon 25023411 25023413 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-028"; exon_number 1; exon_id "ENSE00001555913.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319130.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16428 chr22 HAVANA exon 25023819 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-028"; exon_number 2; exon_id "ENSE00003588312.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319130.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16429 chr22 HAVANA CDS 25023819 25023946 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-028"; exon_number 2; exon_id "ENSE00003588312.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319130.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16430 chr22 HAVANA exon 25024048 25024355 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-028"; exon_number 3; exon_id "ENSE00001651443.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319130.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16431 chr22 HAVANA CDS 25024048 25024355 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-028"; exon_number 3; exon_id "ENSE00001651443.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319130.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16432 chr22 HAVANA exon 25024660 25024963 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-028"; exon_number 4; exon_id "ENSE00003480697.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319130.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16433 chr22 HAVANA CDS 25024660 25024803 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-028"; exon_number 4; exon_id "ENSE00003480697.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319130.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16434 chr22 HAVANA stop_codon 25024804 25024806 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-028"; exon_number 4; exon_id "ENSE00003480697.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319130.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16435 chr22 HAVANA UTR 25023375 25023410 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-028"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319130.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16436 chr22 HAVANA UTR 25024804 25024963 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-028"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319130.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16437 chr22 HAVANA transcript 25023411 25024806 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-027"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16438 chr22 HAVANA exon 25023411 25023586 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-027"; exon_number 1; exon_id "ENSE00001652723.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16439 chr22 HAVANA CDS 25023411 25023586 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-027"; exon_number 1; exon_id "ENSE00001652723.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16440 chr22 HAVANA start_codon 25023411 25023413 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-027"; exon_number 1; exon_id "ENSE00001652723.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16441 chr22 HAVANA exon 25023819 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-027"; exon_number 2; exon_id "ENSE00003588312.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16442 chr22 HAVANA CDS 25023819 25023946 . + 1 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-027"; exon_number 2; exon_id "ENSE00003588312.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16443 chr22 HAVANA exon 25024048 25024103 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-027"; exon_number 3; exon_id "ENSE00001662875.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16444 chr22 HAVANA CDS 25024048 25024103 . + 2 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-027"; exon_number 3; exon_id "ENSE00001662875.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16445 chr22 HAVANA exon 25024206 25024355 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-027"; exon_number 4; exon_id "ENSE00003682103.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16446 chr22 HAVANA CDS 25024206 25024355 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-027"; exon_number 4; exon_id "ENSE00003682103.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16447 chr22 HAVANA exon 25024660 25024806 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-027"; exon_number 5; exon_id "ENSE00002226981.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16448 chr22 HAVANA CDS 25024660 25024803 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-027"; exon_number 5; exon_id "ENSE00002226981.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16449 chr22 HAVANA stop_codon 25024804 25024806 . + 0 gene_id "ENSG00000100031.14"; transcript_id "ENST00000404920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-027"; exon_number 5; exon_id "ENSE00002226981.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16450 chr22 HAVANA UTR 25024804 25024806 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000404920.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GGT1-027"; level 2; tag "basic"; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319131.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16451 chr22 HAVANA transcript 25023843 25024943 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000490087.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GGT1-030"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319133.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16452 chr22 HAVANA exon 25023843 25023946 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000490087.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GGT1-030"; exon_number 1; exon_id "ENSE00001895471.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319133.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16453 chr22 HAVANA exon 25024206 25024355 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000490087.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GGT1-030"; exon_number 2; exon_id "ENSE00003654959.1"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319133.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16454 chr22 HAVANA exon 25024660 25024943 . + . gene_id "ENSG00000100031.14"; transcript_id "ENST00000490087.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GGT1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GGT1-030"; exon_number 3; exon_id "ENSE00001760127.2"; level 2; havana_gene "OTTHUMG00000030859.31"; havana_transcript "OTTHUMT00000319133.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16455 chr22 HAVANA gene 24981588 24989175 . - . gene_id "ENSG00000178026.8"; transcript_id "ENSG00000178026.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM211B"; level 2; havana_gene "OTTHUMG00000150729.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16456 chr22 HAVANA transcript 24981588 24989030 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000318753.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM211B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42991.1"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16457 chr22 HAVANA exon 24988830 24989030 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000318753.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM211B-001"; exon_number 1; exon_id "ENSE00001753854.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42991.1"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16458 chr22 HAVANA CDS 24988830 24989006 . - 0 gene_id "ENSG00000178026.8"; transcript_id "ENST00000318753.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM211B-001"; exon_number 1; exon_id "ENSE00001753854.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42991.1"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16459 chr22 HAVANA start_codon 24989004 24989006 . - 0 gene_id "ENSG00000178026.8"; transcript_id "ENST00000318753.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM211B-001"; exon_number 1; exon_id "ENSE00001753854.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42991.1"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16460 chr22 HAVANA exon 24985789 24985917 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000318753.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM211B-001"; exon_number 2; exon_id "ENSE00003649609.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42991.1"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16461 chr22 HAVANA CDS 24985789 24985917 . - 0 gene_id "ENSG00000178026.8"; transcript_id "ENST00000318753.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM211B-001"; exon_number 2; exon_id "ENSE00003649609.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42991.1"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16462 chr22 HAVANA exon 24984182 24984297 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000318753.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM211B-001"; exon_number 3; exon_id "ENSE00003579732.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42991.1"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16463 chr22 HAVANA CDS 24984182 24984297 . - 0 gene_id "ENSG00000178026.8"; transcript_id "ENST00000318753.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM211B-001"; exon_number 3; exon_id "ENSE00003579732.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42991.1"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16464 chr22 HAVANA exon 24981588 24982379 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000318753.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM211B-001"; exon_number 4; exon_id "ENSE00003458221.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42991.1"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16465 chr22 HAVANA CDS 24981857 24982379 . - 1 gene_id "ENSG00000178026.8"; transcript_id "ENST00000318753.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM211B-001"; exon_number 4; exon_id "ENSE00003458221.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42991.1"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16466 chr22 HAVANA stop_codon 24981854 24981856 . - 0 gene_id "ENSG00000178026.8"; transcript_id "ENST00000318753.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM211B-001"; exon_number 4; exon_id "ENSE00003458221.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42991.1"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16467 chr22 HAVANA UTR 24989007 24989030 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000318753.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM211B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42991.1"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16468 chr22 HAVANA UTR 24981588 24981856 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000318753.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM211B-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS42991.1"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319832.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16469 chr22 HAVANA transcript 24981588 24989033 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16470 chr22 HAVANA exon 24988830 24989033 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; exon_number 1; exon_id "ENSE00001620452.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16471 chr22 HAVANA CDS 24988830 24989006 . - 0 gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; exon_number 1; exon_id "ENSE00001620452.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16472 chr22 HAVANA start_codon 24989004 24989006 . - 0 gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; exon_number 1; exon_id "ENSE00001620452.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16473 chr22 HAVANA exon 24985789 24985917 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; exon_number 2; exon_id "ENSE00003649609.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16474 chr22 HAVANA CDS 24985789 24985917 . - 0 gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; exon_number 2; exon_id "ENSE00003649609.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16475 chr22 HAVANA exon 24984647 24985233 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; exon_number 3; exon_id "ENSE00001680014.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16476 chr22 HAVANA CDS 24985216 24985233 . - 0 gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; exon_number 3; exon_id "ENSE00001680014.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16477 chr22 HAVANA stop_codon 24985213 24985215 . - 0 gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; exon_number 3; exon_id "ENSE00001680014.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16478 chr22 HAVANA exon 24984182 24984297 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; exon_number 4; exon_id "ENSE00003458596.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16479 chr22 HAVANA exon 24981588 24982379 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; exon_number 5; exon_id "ENSE00003480598.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16480 chr22 HAVANA UTR 24989007 24989033 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16481 chr22 HAVANA UTR 24984647 24985215 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16482 chr22 HAVANA UTR 24984182 24984297 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16483 chr22 HAVANA UTR 24981588 24982379 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000446942.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-005"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319836.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16484 chr22 HAVANA transcript 24981603 24989040 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000491910.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM211B-003"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319834.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16485 chr22 HAVANA exon 24988184 24989040 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000491910.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM211B-003"; exon_number 1; exon_id "ENSE00001840084.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319834.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16486 chr22 HAVANA exon 24985789 24985917 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000491910.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM211B-003"; exon_number 2; exon_id "ENSE00003578268.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319834.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16487 chr22 HAVANA exon 24984182 24985361 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000491910.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM211B-003"; exon_number 3; exon_id "ENSE00001825132.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319834.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16488 chr22 HAVANA exon 24981603 24982379 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000491910.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM211B-003"; exon_number 4; exon_id "ENSE00001865564.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319834.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16489 chr22 HAVANA transcript 24981617 24989031 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16490 chr22 HAVANA exon 24988830 24989031 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; exon_number 1; exon_id "ENSE00001686467.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16491 chr22 HAVANA CDS 24988830 24989006 . - 0 gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; exon_number 1; exon_id "ENSE00001686467.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16492 chr22 HAVANA start_codon 24989004 24989006 . - 0 gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; exon_number 1; exon_id "ENSE00001686467.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16493 chr22 HAVANA exon 24988184 24988390 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; exon_number 2; exon_id "ENSE00003618394.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16494 chr22 HAVANA CDS 24988346 24988390 . - 0 gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; exon_number 2; exon_id "ENSE00003618394.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16495 chr22 HAVANA stop_codon 24988343 24988345 . - 0 gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; exon_number 2; exon_id "ENSE00003618394.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16496 chr22 HAVANA exon 24985789 24985917 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; exon_number 3; exon_id "ENSE00003578268.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16497 chr22 HAVANA exon 24984182 24984297 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; exon_number 4; exon_id "ENSE00003458596.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16498 chr22 HAVANA exon 24981617 24982379 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; exon_number 5; exon_id "ENSE00001658093.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16499 chr22 HAVANA UTR 24989007 24989031 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16500 chr22 HAVANA UTR 24988184 24988345 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16501 chr22 HAVANA UTR 24985789 24985917 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16502 chr22 HAVANA UTR 24984182 24984297 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16503 chr22 HAVANA UTR 24981617 24982379 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000404045.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "FAM211B-002"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319833.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16504 chr22 HAVANA transcript 24981630 24989046 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000460524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM211B-004"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319835.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16505 chr22 HAVANA exon 24988830 24989046 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000460524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM211B-004"; exon_number 1; exon_id "ENSE00001887656.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319835.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16506 chr22 HAVANA exon 24985789 24985917 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000460524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM211B-004"; exon_number 2; exon_id "ENSE00003578268.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319835.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16507 chr22 HAVANA exon 24984182 24985361 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000460524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM211B-004"; exon_number 3; exon_id "ENSE00001825132.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319835.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16508 chr22 HAVANA exon 24981630 24982379 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000460524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM211B-004"; exon_number 4; exon_id "ENSE00001947113.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319835.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16509 chr22 HAVANA transcript 24984650 24988252 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000495297.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FAM211B-007"; level 2; tag "basic"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319838.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16510 chr22 HAVANA exon 24988184 24988252 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000495297.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FAM211B-007"; exon_number 1; exon_id "ENSE00001832960.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319838.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16511 chr22 HAVANA exon 24985789 24985917 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000495297.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FAM211B-007"; exon_number 2; exon_id "ENSE00003578268.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319838.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16512 chr22 HAVANA exon 24984650 24985233 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000495297.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FAM211B-007"; exon_number 3; exon_id "ENSE00001894342.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319838.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16513 chr22 HAVANA transcript 24985133 24989001 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000465334.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM211B-006"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16514 chr22 HAVANA exon 24988830 24989001 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000465334.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM211B-006"; exon_number 1; exon_id "ENSE00001882224.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16515 chr22 HAVANA exon 24985133 24985917 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000465334.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM211B-006"; exon_number 2; exon_id "ENSE00001809893.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319837.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16516 chr22 HAVANA transcript 24985374 24989175 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000464490.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FAM211B-008"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319839.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16517 chr22 HAVANA exon 24989145 24989175 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000464490.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FAM211B-008"; exon_number 1; exon_id "ENSE00001921377.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319839.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16518 chr22 HAVANA exon 24988184 24988390 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000464490.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FAM211B-008"; exon_number 2; exon_id "ENSE00003678417.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319839.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16519 chr22 HAVANA exon 24985789 24985917 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000464490.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FAM211B-008"; exon_number 3; exon_id "ENSE00003578268.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319839.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16520 chr22 HAVANA exon 24985374 24985581 . - . gene_id "ENSG00000178026.8"; transcript_id "ENST00000464490.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM211B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FAM211B-008"; exon_number 4; exon_id "ENSE00001867777.1"; level 2; havana_gene "OTTHUMG00000150729.1"; havana_transcript "OTTHUMT00000319839.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16521 chr22 HAVANA gene 24994021 24995365 . + . gene_id "ENSG00000230947.2"; transcript_id "ENSG00000230947.2"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "AP000356.2"; transcript_type "sense_intronic"; transcript_status "NOVEL"; transcript_name "AP000356.2"; level 2; havana_gene "OTTHUMG00000150625.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16522 chr22 HAVANA transcript 24994021 24995365 . + . gene_id "ENSG00000230947.2"; transcript_id "ENST00000438893.2"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "AP000356.2"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "AP000356.2-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000150625.2"; havana_transcript "OTTHUMT00000319204.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16523 chr22 HAVANA exon 24994021 24994173 . + . gene_id "ENSG00000230947.2"; transcript_id "ENST00000438893.2"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "AP000356.2"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "AP000356.2-001"; exon_number 1; exon_id "ENSE00001730752.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150625.2"; havana_transcript "OTTHUMT00000319204.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16524 chr22 HAVANA exon 24995155 24995365 . + . gene_id "ENSG00000230947.2"; transcript_id "ENST00000438893.2"; gene_type "sense_intronic"; gene_status "NOVEL"; gene_name "AP000356.2"; transcript_type "sense_intronic"; transcript_status "KNOWN"; transcript_name "AP000356.2-001"; exon_number 2; exon_id "ENSE00001643702.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000150625.2"; havana_transcript "OTTHUMT00000319204.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16525 chr22 HAVANA gene 25028882 25046799 . + . gene_id "ENSG00000215481.4"; transcript_id "ENSG00000215481.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP3"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP3"; level 2; havana_gene "OTTHUMG00000150726.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16526 chr22 ENSEMBL transcript 25028882 25043727 . + . gene_id "ENSG00000215481.4"; transcript_id "ENST00000447261.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP3-201"; level 3; havana_gene "OTTHUMG00000150726.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16527 chr22 ENSEMBL exon 25028882 25029410 . + . gene_id "ENSG00000215481.4"; transcript_id "ENST00000447261.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP3-201"; exon_number 1; exon_id "ENSE00001730922.1"; level 3; havana_gene "OTTHUMG00000150726.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16528 chr22 ENSEMBL exon 25040707 25040766 . + . gene_id "ENSG00000215481.4"; transcript_id "ENST00000447261.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP3-201"; exon_number 2; exon_id "ENSE00001726253.1"; level 3; havana_gene "OTTHUMG00000150726.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16529 chr22 ENSEMBL exon 25041603 25041712 . + . gene_id "ENSG00000215481.4"; transcript_id "ENST00000447261.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP3-201"; exon_number 3; exon_id "ENSE00001804850.1"; level 3; havana_gene "OTTHUMG00000150726.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16530 chr22 ENSEMBL exon 25042970 25043727 . + . gene_id "ENSG00000215481.4"; transcript_id "ENST00000447261.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP3-201"; exon_number 4; exon_id "ENSE00001729504.2"; level 3; havana_gene "OTTHUMG00000150726.3";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16531 chr22 HAVANA transcript 25040704 25046799 . + . gene_id "ENSG00000215481.4"; transcript_id "ENST00000382243.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP3-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150726.3"; havana_transcript "OTTHUMT00000319859.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16532 chr22 HAVANA exon 25040704 25040766 . + . gene_id "ENSG00000215481.4"; transcript_id "ENST00000382243.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP3-001"; exon_number 1; exon_id "ENSE00001629972.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150726.3"; havana_transcript "OTTHUMT00000319859.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16533 chr22 HAVANA exon 25041603 25041715 . + . gene_id "ENSG00000215481.4"; transcript_id "ENST00000382243.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP3-001"; exon_number 2; exon_id "ENSE00001718302.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150726.3"; havana_transcript "OTTHUMT00000319859.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16534 chr22 HAVANA exon 25042970 25043109 . + . gene_id "ENSG00000215481.4"; transcript_id "ENST00000382243.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP3-001"; exon_number 3; exon_id "ENSE00001672811.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150726.3"; havana_transcript "OTTHUMT00000319859.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16535 chr22 HAVANA exon 25044162 25044299 . + . gene_id "ENSG00000215481.4"; transcript_id "ENST00000382243.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP3-001"; exon_number 4; exon_id "ENSE00001711904.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150726.3"; havana_transcript "OTTHUMT00000319859.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16536 chr22 HAVANA exon 25045242 25045353 . + . gene_id "ENSG00000215481.4"; transcript_id "ENST00000382243.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP3-001"; exon_number 5; exon_id "ENSE00001724898.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150726.3"; havana_transcript "OTTHUMT00000319859.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16537 chr22 HAVANA exon 25045824 25045992 . + . gene_id "ENSG00000215481.4"; transcript_id "ENST00000382243.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP3-001"; exon_number 6; exon_id "ENSE00001633725.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150726.3"; havana_transcript "OTTHUMT00000319859.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16538 chr22 HAVANA exon 25046713 25046799 . + . gene_id "ENSG00000215481.4"; transcript_id "ENST00000382243.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BCRP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BCRP3-001"; exon_number 7; exon_id "ENSE00001800667.1"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000150726.3"; havana_transcript "OTTHUMT00000319859.2";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16539 chr22 HAVANA gene 25041133 25055114 . - . gene_id "ENSG00000224124.2"; transcript_id "ENSG00000224124.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L10P"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L10P"; level 1; tag "pseudo_consens"; havana_gene "OTTHUMG00000150732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16540 chr22 ENSEMBL transcript 25041133 25055114 . - . gene_id "ENSG00000224124.2"; transcript_id "ENST00000504931.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L10P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L10P-201"; level 3; havana_gene "OTTHUMG00000150732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16541 chr22 ENSEMBL exon 25049018 25055114 . - . gene_id "ENSG00000224124.2"; transcript_id "ENST00000504931.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L10P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L10P-201"; exon_number 1; exon_id "ENSE00002322456.1"; level 3; havana_gene "OTTHUMG00000150732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16542 chr22 ENSEMBL exon 25047855 25047961 . - . gene_id "ENSG00000224124.2"; transcript_id "ENST00000504931.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L10P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L10P-201"; exon_number 2; exon_id "ENSE00001762317.1"; level 3; havana_gene "OTTHUMG00000150732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16543 chr22 ENSEMBL exon 25046126 25046328 . - . gene_id "ENSG00000224124.2"; transcript_id "ENST00000504931.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L10P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L10P-201"; exon_number 3; exon_id "ENSE00001766094.2"; level 3; havana_gene "OTTHUMG00000150732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16544 chr22 ENSEMBL exon 25045692 25045820 . - . gene_id "ENSG00000224124.2"; transcript_id "ENST00000504931.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L10P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L10P-201"; exon_number 4; exon_id "ENSE00001661876.2"; level 3; havana_gene "OTTHUMG00000150732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16545 chr22 ENSEMBL exon 25044121 25045035 . - . gene_id "ENSG00000224124.2"; transcript_id "ENST00000504931.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L10P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L10P-201"; exon_number 5; exon_id "ENSE00002284119.1"; level 3; havana_gene "OTTHUMG00000150732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16546 chr22 ENSEMBL exon 25041133 25043228 . - . gene_id "ENSG00000224124.2"; transcript_id "ENST00000504931.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L10P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L10P-201"; exon_number 6; exon_id "ENSE00002214868.1"; level 3; havana_gene "OTTHUMG00000150732.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16547 chr22 HAVANA transcript 25053448 25054732 . - . gene_id "ENSG00000224124.2"; transcript_id "ENST00000436994.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L10P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L10P-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150732.1"; havana_transcript "OTTHUMT00000319861.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16548 chr22 HAVANA exon 25053448 25054732 . - . gene_id "ENSG00000224124.2"; transcript_id "ENST00000436994.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POM121L10P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "POM121L10P-001"; exon_number 1; exon_id "ENSE00001621857.1"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000150732.1"; havana_transcript "OTTHUMT00000319861.1";
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16549 chr22 ENSEMBL gene 25047814 25048364 . + . gene_id "ENSG00000240906.2"; transcript_id "ENSG00000240906.2"; gene_type "pseudogene"; gene_status "NOVEL"; gene_name "AP000356.1"; transcript_type "pseudogene"; transcript_status "NOVEL"; transcript_name "AP000356.1"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
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diff changeset
16550 chr22 ENSEMBL transcript 25047814 25048364 . + . gene_id "ENSG00000240906.2"; transcript_id "ENST00000344557.3"; gene_type "pseudogene"; gene_status "NOVEL"; gene_name "AP000356.1"; transcript_type "processed_pseudogene"; transcript_status "NOVEL"; transcript_name "AP000356.1-201"; level 3;
bade631353d2 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 9a59864f0bfb9937309d2c18b8cf3715c8067808
rnateam
parents:
diff changeset
16551 chr22 ENSEMBL exon 25047814 25048364 . + . gene_id "ENSG00000240906.2"; transcript_id "ENST00000344557.3"; gene_type "pseudogene"; gene_status "NOVEL"; gene_name "AP000356.1"; transcript_type "processed_pseudogene"; transcript_status "NOVEL"; transcript_name "AP000356.1-201"; exon_number 1; exon_id "ENSE00001408857.2"; level 3;